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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
116 sequences found in this patent (in total)

Displaying 1 - 10 of 116 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221139857
      NG_009364
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      15,651 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NG_009364
      0.12% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823927
      XM_003311267
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      707 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003311267
      2.69% cov
    • Alignment Length
      19 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255656
      XM_003276901
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      829 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_003276901
      2.29% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:302565311
      NM_001194722
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      2,269 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001194722
      0.84% cov
    • Alignment Length
      19 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301756968
      XM_002914287
    • Hit length
      586 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002914287
      3.24% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677988
      XM_002816817
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      2,281 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002816817
      0.83% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198030
      XM_002746491
    • Hit length
      516 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_002746491
      3.68% cov
    • Alignment Length
      19 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:240849216
      NM_001161880
    • Hit length
      486 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001161880
      3.91% cov
    • Alignment Length
      19 bp
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619085
      NM_001009865
    • Hit length
      592 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001009865
      3.21% cov
    • Alignment Length
      19 bp
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221139857
      NG_009364
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      15,651 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NG_009364
      0.12% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823927
      XM_003311267
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      707 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003311267
      2.69% cov
    • Alignment Length
      19 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255656
      XM_003276901
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      829 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003276901
      2.29% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:302565311
      NM_001194722
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      2,269 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001194722
      0.84% cov
    • Alignment Length
      19 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301756968
      XM_002914287
    • Hit length
      586 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002914287
      3.24% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677988
      XM_002816817
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      2,281 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002816817
      0.83% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198030
      XM_002746491
    • Hit length
      516 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002746491
      3.68% cov
    • Alignment Length
      19 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291396116
      XM_002714669
    • Hit length
      495 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002714669
      3.84% cov
    • Alignment Length
      19 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:240849216
      NM_001161880
    • Hit length
      486 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001161880
      3.91% cov
    • Alignment Length
      19 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:149643100
      NM_001098958
    • Hit length
      2,453 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001098958
      0.77% cov
    • Alignment Length
      19 bp
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619085
      NM_001009865
    • Hit length
      592 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_001009865
      3.21% cov
    • Alignment Length
      19 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:221139857
      NG_009364
      1 of 17 hits reported for Homo sapiens.
    • Hit length
      15,651 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_009364
      0.12% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823927
      XM_003311267
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      707 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003311267
      2.69% cov
    • Alignment Length
      19 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:223469650
      FJ542310
    • Hit length
      359 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FJ542310
      5.29% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278003
      AB385124
      1 of 3 hits reported for synthetic construct.
    • Hit length
      509 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB385124
      3.73% cov
    • Alignment Length
      19 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335292107
      XM_001929598
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      1,382 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001929598
      1.37% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823990
      XM_003311282
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,718 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003311282
      0.7% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678008
      XM_002816832
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,207 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002816832
      0.86% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198049
      XM_002806699
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,163 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002806699
      0.88% cov
    • Alignment Length
      19 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291396126
      XM_002714649
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,152 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002714649
      1.65% cov
    • Alignment Length
      19 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:226051918
      NM_001146177
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,785 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001146177
      1.06% cov
    • Alignment Length
      19 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:226246520
      NM_001146090
      1 of 3 hits reported for Ovis aries.
    • Hit length
      1,341 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001146090
      1.42% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:208431772
      NM_002648
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      2,751 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_002648
      0.69% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109070953
      XM_001113117
    • Hit length
      3,331 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_001113117
      0.57% cov
    • Alignment Length
      19 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:31342749
      NM_174144
    • Hit length
      2,753 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_174144
      0.69% cov
    • Alignment Length
      19 bp
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57163856
      NM_001009322
    • Hit length
      1,584 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_001009322
      1.2% cov
    • Alignment Length
      19 bp
  • Planctomyces limnophilus DSM 3776

    Planctomyces limnophilus DSM 3776

    • Public DB hit
      GI:296012614
      CP001744
    • Hit length
      5,423,075 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CP001744
      0% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261861259
      AB528988
      1 of 2 hits reported for synthetic construct.
    • Hit length
      956 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AB528988
      1.99% cov
    • Alignment Length
      19 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823990
      XM_003311282
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,718 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003311282
      0.7% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255712
      XM_003276928
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,857 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003276928
      1.02% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678008
      XM_002816832
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,207 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002816832
      0.86% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296198049
      XM_002806699
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,163 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002806699
      0.88% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:208431772
      NM_002648
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      2,751 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_002648
      0.69% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109070953
      XM_001113117
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,331 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001113117
      0.57% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261861259
      AB528988
      1 of 4 hits reported for synthetic construct.
    • Hit length
      956 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB528988
      1.99% cov
    • Alignment Length
      19 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823990
      XM_003311282
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,718 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003311282
      0.7% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332255712
      XM_003276928
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,857 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003276928
      1.02% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:208431772
      NM_002648
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      2,751 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_002648
      0.69% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109070953
      XM_001113117
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,331 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001113117
      0.57% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:261861259
      AB528988
      1 of 4 hits reported for synthetic construct.
    • Hit length
      956 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AB528988
      1.99% cov
    • Alignment Length
      19 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297678008
      XM_002816832
    • Hit length
      2,207 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 6
      94.74% cov
      XM_002816832
      0.82% cov
    • Alignment Length
      18 bp
Occurrence
15 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332809471
      XM_001147994
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      3,526 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001147994
      0.54% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:166706902
      NM_002053
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      3,050 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_002053
      0.62% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097933
      NM_001132053
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,134 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001132053
      0.89% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168150602
      CU678099
      1 of 7 hits reported for synthetic construct.
    • Hit length
      1,172 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CU678099
      1.62% cov
    • Alignment Length
      19 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:52077801
      AC130481
    • Hit length
      159,436 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 7
      94.74% cov
      AC130481
      0.01% cov
    • Alignment Length
      18 bp
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332809469
      XM_001146907
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      2,970 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001146907
      0.64% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332222084
      XM_003260146
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      2,776 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003260146
      0.68% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297664505
      XR_092676
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      1,656 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_092676
      1.15% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297279107
      XM_001085311
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      3,063 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001085311
      0.62% cov
    • Alignment Length
      19 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293357611
      XM_221883
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,785 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_221883
      1.06% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:166706902
      NM_002053
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      3,050 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_002053
      0.62% cov
    • Alignment Length
      19 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:190691702
      EU832454
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,831 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      EU832454
      1.04% cov
    • Alignment Length
      19 bp
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:166706902
      NM_002053
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,050 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_002053
      0.62% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097933
      NM_001132053
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,134 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001132053
      0.89% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168150602
      CU678099
      1 of 8 hits reported for synthetic construct.
    • Hit length
      1,172 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CU678099
      1.62% cov
    • Alignment Length
      19 bp
  • Drosophila willistoni

    Drosophila willistoni

    • Public DB hit
      GI:195443429
      XM_002069384
    • Hit length
      1,029 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 9
      94.74% cov
      XM_002069384
      1.75% cov
    • Alignment Length
      18 bp
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
19
Type
RNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332833283
      XM_520345
    • Hit length
      3,150 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_520345
      0.6% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332261242
      XM_003279637
    • Hit length
      2,299 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003279637
      0.83% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301770650
      XM_002920705
    • Hit length
      1,551 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002920705
      1.23% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685665
      XM_002820358
    • Hit length
      599 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002820358
      3.17% cov
    • Alignment Length
      19 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297480921
      XM_002691687
      1 of 2 hits reported for Bos taurus.
    • Hit length
      1,435 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002691687
      1.32% cov
    • Alignment Length
      19 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297269915
      XM_001118265
    • Hit length
      1,242 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001118265
      1.53% cov
    • Alignment Length
      19 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296191130
      XM_002743477
    • Hit length
      1,928 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002743477
      0.99% cov
    • Alignment Length
      19 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:207028087
      NM_002957
    • Hit length
      5,547 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_002957
      0.34% cov
    • Alignment Length
      19 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194225998
      XM_001917365
    • Hit length
      1,965 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001917365
      0.97% cov
    • Alignment Length
      19 bp
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149527423
      XM_001508106
    • Hit length
      285 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001508106
      6.67% cov
    • Alignment Length
      19 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73967651
      XM_548399
      1 of 14 hits reported for Canis lupus familiaris.
    • Hit length
      1,319 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_548399
      1.44% cov
    • Alignment Length
      19 bp
Occurrence
23 times in PatSeqDB
Tools
PatSeq Finder

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