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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
20 sequences found in this patent (in total)

Displaying 1 - 10 of 20 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:158749637
      NM_011905
      1 of 12 hits reported for Mus musculus.
    • Hit length
      2,874 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_011905
      0.84% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder
SEQ ID NO
2
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:158749637
      NM_011905
      1 of 10 hits reported for Mus musculus.
    • Hit length
      2,874 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_011905
      0.84% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:42476288
      NM_198769
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      2,614 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_198769
      0.92% cov
    • Alignment Length
      24 bp
  • Micromys minutus

    Micromys minutus

    • Public DB hit
      GI:305387966
      HM215603
    • Hit length
      2,355 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HM215603
      1.02% cov
    • Alignment Length
      24 bp
  • Apodemus sylvaticus

    Apodemus sylvaticus

    • Public DB hit
      GI:305387964
      HM215602
    • Hit length
      2,355 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HM215602
      1.02% cov
    • Alignment Length
      24 bp
  • Apodemus flavicollis

    Apodemus flavicollis

    • Public DB hit
      GI:305387962
      HM215601
    • Hit length
      2,355 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HM215601
      1.02% cov
    • Alignment Length
      24 bp
  • Apodemus alpicola

    Apodemus alpicola

    • Public DB hit
      GI:305387960
      HM215600
    • Hit length
      2,355 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HM215600
      1.02% cov
    • Alignment Length
      24 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
3
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:146149239
      NM_126166
      1 of 9 hits reported for Mus musculus.
    • Hit length
      4,327 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_126166
      0.49% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder
SEQ ID NO
4
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:146149239
      NM_126166
      1 of 9 hits reported for Mus musculus.
    • Hit length
      4,327 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_126166
      0.51% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder
SEQ ID NO
5
Length
18
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130391
      NM_021297
      1 of 14 hits reported for Mus musculus.
    • Hit length
      3,847 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_021297
      0.47% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Felis catus

    Felis catus

    • Public DB hit
      GI:226968368
      AC235986
    • Hit length
      177,385 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AC235986
      0.01% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Leishmania mexicana MHOM/GT/2001/U1103

    Leishmania mexicana MHOM/GT/2001/U1103

    • Public DB hit
      GI:322490578
      FR799573
    • Hit length
      3,343,498 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 5
      94.44% cov
      FR799573
      0% cov
    • Alignment Length
      17 bp
  • Leishmania major strain Friedlin

    Leishmania major strain Friedlin

    • Public DB hit
      GI:321399811
      FR796428
    • Hit length
      1,604,637 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 5
      94.44% cov
      FR796428
      0% cov
    • Alignment Length
      17 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
6
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130391
      NM_021297
      1 of 10 hits reported for Mus musculus.
    • Hit length
      3,847 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_021297
      0.57% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73973082
      XM_532159
    • Hit length
      6,657 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 6
      90.91% cov
      XM_532159
      0.3% cov
    • Alignment Length
      20 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
7
Length
19
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:124248589
      NM_016928
      1 of 7 hits reported for Mus musculus.
    • Hit length
      3,211 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_016928
      0.59% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus molossinus

    Mus musculus molossinus

    • Public DB hit
      GI:89512196
      DQ414410
    • Hit length
      5,792 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ414410
      0.33% cov
    • Alignment Length
      19 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
19
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:124248589
      NM_016928
      1 of 7 hits reported for Mus musculus.
    • Hit length
      3,211 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_016928
      0.59% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus molossinus

    Mus musculus molossinus

    • Public DB hit
      GI:89512196
      DQ414410
    • Hit length
      5,792 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      DQ414410
      0.33% cov
    • Alignment Length
      19 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
9
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:157057165
      NM_031178
      1 of 9 hits reported for Mus musculus.
    • Hit length
      3,471 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_031178
      0.69% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000353
      BC172644
    • Hit length
      3,160 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BC172644
      0.76% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder
SEQ ID NO
10
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:157057165
      NM_031178
      1 of 9 hits reported for Mus musculus.
    • Hit length
      3,471 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_031178
      0.69% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:225000353
      BC172644
    • Hit length
      3,160 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BC172644
      0.76% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
Tools
PatSeq Finder

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