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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
15 sequences found in this patent (in total)

Displaying 1 - 10 of 15 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
32
Type
nucleotide
Locations
Drawings

Declared organism:
Artificial

Determined organism:
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
11
Type
peptide
Locations
Drawings

Declared organism:
Artificial

Determined organism:
  • Coccidioides immitis RS

    Coccidioides immitis RS

    • Public DB hit
      GI:119181862
      XP_001242109
    • Hit length
      832 aa
    • E Value
      2.5E3
    • BLAST Score
      24.8 bits
    • Similarity
      90%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 2
      90.91% cov
      XP_001242109
      1.2% cov
    • Alignment Length
      10 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
133
Type
peptide
Locations
Drawings

Declared organism:
Homo sapiens

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:208188
      AAA72358
      1 of 14 hits reported for synthetic construct.
    • Hit length
      461 aa
    • E Value
      5.22E-73
    • BLAST Score
      277.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAA72358
      28.85% cov
    • Alignment Length
      133 aa
    • CIGAR string
      133M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:42542805
      AAH66254
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      153 aa
    • E Value
      1.44E-71
    • BLAST Score
      273.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAH66254
      86.93% cov
    • Alignment Length
      133 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244471
      XP_003271397
    • Hit length
      153 aa
    • E Value
      1.04E-70
    • BLAST Score
      270 bits
    • Similarity
      99.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003271397
      86.93% cov
    • Alignment Length
      133 aa
Occurrence
2355 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788644
      NG_008170
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      145,031 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      NG_008170
      0.01% cov
    • Alignment Length
      19 bp
    • CIGAR string
      2H19M mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium falciparum 3D7

    Plasmodium falciparum 3D7

    • Public DB hit
      GI:124805346
      XM_001350378
      1 of 3 hits reported for Plasmodium falciparum 3D7.
    • Hit length
      1,110 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      XM_001350378
      1.71% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus pseudintermedius ED99

    Staphylococcus pseudintermedius ED99

    • Public DB hit
      GI:323463200
      CP002478
    • Hit length
      2,572,216 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      CP002478
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      2H19M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus pseudintermedius HKU10-03

    Staphylococcus pseudintermedius HKU10-03

    • Public DB hit
      GI:317160986
      CP002439
    • Hit length
      2,617,381 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      CP002439
      0% cov
    • Alignment Length
      19 bp
  • Legionella pneumophila 130b

    Legionella pneumophila 130b

    • Public DB hit
      GI:307608751
      FR687201
    • Hit length
      3,489,800 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      FR687201
      0% cov
    • Alignment Length
      19 bp
  • Legionella pneumophila str. Paris

    Legionella pneumophila str. Paris

    • Public DB hit
      GI:53755675
      CR628338
    • Hit length
      131,885 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 4
      90.48% cov
      CR628338
      0.01% cov
    • Alignment Length
      19 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:193788644
      NG_008170
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      145,031 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      NG_008170
      0.01% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium falciparum 3D7

    Plasmodium falciparum 3D7

    • Public DB hit
      GI:124805346
      XM_001350378
      1 of 3 hits reported for Plasmodium falciparum 3D7.
    • Hit length
      1,110 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      XM_001350378
      1.71% cov
    • Alignment Length
      19 bp
    • CIGAR string
      2H19M mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus pseudintermedius ED99

    Staphylococcus pseudintermedius ED99

    • Public DB hit
      GI:323463200
      CP002478
    • Hit length
      2,572,216 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      CP002478
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Staphylococcus pseudintermedius HKU10-03

    Staphylococcus pseudintermedius HKU10-03

    • Public DB hit
      GI:317160986
      CP002439
    • Hit length
      2,617,381 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      CP002439
      0% cov
    • Alignment Length
      19 bp
  • Legionella pneumophila 130b

    Legionella pneumophila 130b

    • Public DB hit
      GI:307608751
      FR687201
    • Hit length
      3,489,800 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      FR687201
      0% cov
    • Alignment Length
      19 bp
  • Legionella pneumophila str. Paris

    Legionella pneumophila str. Paris

    • Public DB hit
      GI:53755675
      CR628338
    • Hit length
      131,885 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 5
      90.48% cov
      CR628338
      0.01% cov
    • Alignment Length
      19 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:291219938
      NG_016779
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      12,026 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_016779
      0.17% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332820227
      XM_003310465
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      600 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003310465
      3.5% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244472
      XM_003271350
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      496 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003271350
      4.23% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297674283
      XM_002815115
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,028 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002815115
      2.04% cov
    • Alignment Length
      21 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:162951935
      NM_001112654
    • Hit length
      465 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001112654
      4.52% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114052043
      NM_001047130
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      497 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001047130
      4.23% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312150989
      HQ447521
      1 of 6 hits reported for synthetic construct.
    • Hit length
      561 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      HQ447521
      3.74% cov
    • Alignment Length
      21 bp
  • Saimiri sciureus

    Saimiri sciureus

    • Public DB hit
      GI:145843773
      DQ989369
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ989369
      7.55% cov
    • Alignment Length
      21 bp
  • Aotus azarai infulatus

    Aotus azarai infulatus

    • Public DB hit
      GI:145843772
      DQ989368
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      DQ989368
      7.55% cov
    • Alignment Length
      21 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:291219938
      NG_016779
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      12,026 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_016779
      0.17% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332820227
      XM_003310465
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      600 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003310465
      3.5% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244472
      XM_003271350
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      496 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003271350
      4.23% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297674283
      XM_002815115
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,028 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002815115
      2.04% cov
    • Alignment Length
      21 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:162951935
      NM_001112654
    • Hit length
      465 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001112654
      4.52% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114052043
      NM_001047130
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      497 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001047130
      4.23% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312150989
      HQ447521
      1 of 6 hits reported for synthetic construct.
    • Hit length
      561 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      HQ447521
      3.74% cov
    • Alignment Length
      21 bp
  • Saimiri sciureus

    Saimiri sciureus

    • Public DB hit
      GI:145843773
      DQ989369
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ989369
      7.55% cov
    • Alignment Length
      21 bp
  • Aotus azarai infulatus

    Aotus azarai infulatus

    • Public DB hit
      GI:145843772
      DQ989368
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ989368
      7.55% cov
    • Alignment Length
      21 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:291219938
      NG_016779
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      12,026 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_016779
      0.17% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332820227
      XM_003310465
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      600 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003310465
      3.5% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244472
      XM_003271350
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      496 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003271350
      4.23% cov
    • Alignment Length
      21 bp
    • CIGAR string
      9MN11M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297674283
      XM_002815115
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,028 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002815115
      2.04% cov
    • Alignment Length
      21 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:162951935
      NM_001112654
    • Hit length
      465 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001112654
      4.52% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114052043
      NM_001047130
    • Hit length
      497 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001047130
      4.23% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312150989
      HQ447521
      1 of 6 hits reported for synthetic construct.
    • Hit length
      561 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      HQ447521
      3.74% cov
    • Alignment Length
      21 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:259151672
      FP236334
      1 of 2 hits reported for Danio rerio.
    • Hit length
      102,400 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      94.74%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 8
      90.48% cov
      FP236334
      0.02% cov
    • Alignment Length
      19 bp
  • Saimiri sciureus

    Saimiri sciureus

    • Public DB hit
      GI:145843773
      DQ989369
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      DQ989369
      7.55% cov
    • Alignment Length
      21 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:291219938
      NG_016779
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      12,026 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NG_016779
      0.17% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332820227
      XM_003310465
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      600 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003310465
      3.5% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244472
      XM_003271350
      1 of 4 hits reported for Nomascus leucogenys.
    • Hit length
      496 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003271350
      4.23% cov
    • Alignment Length
      21 bp
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297674283
      XM_002815115
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,028 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_002815115
      2.04% cov
    • Alignment Length
      21 bp
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:162951935
      NM_001112654
    • Hit length
      465 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001112654
      4.52% cov
    • Alignment Length
      21 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:114052043
      NM_001047130
    • Hit length
      497 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_001047130
      4.23% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312150989
      HQ447521
      1 of 6 hits reported for synthetic construct.
    • Hit length
      561 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      HQ447521
      3.74% cov
    • Alignment Length
      21 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:259151672
      FP236334
      1 of 2 hits reported for Danio rerio.
    • Hit length
      102,400 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      94.74%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 9
      90.48% cov
      FP236334
      0.02% cov
    • Alignment Length
      19 bp
  • Saimiri sciureus

    Saimiri sciureus

    • Public DB hit
      GI:145843773
      DQ989369
    • Hit length
      278 bp
    • E Value
      2.93E0
    • BLAST Score
      35.3 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      DQ989369
      7.55% cov
    • Alignment Length
      21 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
21
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194223852
      XM_001493976
    • Hit length
      2,118 bp
    • E Value
      3.98E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      90.48%
    • Alignment (schematic)

      SEQ ID NO 10
      90.48% cov
      XM_001493976
      0.9% cov
    • Alignment Length
      19 bp
    • CIGAR string
      1H19M1H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder

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