Dna Encoding The Novel Mammalian Protein, Ire1p

  • Published: Oct 21, 2008
  • Earliest Priority: Jul 21 1998
  • Family: 2
  • Cited Works: 49
  • Cited by: 2
  • Cites: 1
  • Sequences: 13
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
13 sequences found in this patent (in total)

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Download sequences in fasta format: 5 peptides 8 nucleotides

Displaying 1 - 10 of 13 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
3,629
Sequence Type
nucleotide
Locations
Claims, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:3300093
      AF059198
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      3,629 bp
    • E Value
      0E0
    • BLAST Score
      6,702.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF059198
      100% cov
    • Alignment Length
      3,629 bp
    • CIGAR string
      3629M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848839
      XM_511585
    • Hit length
      4,085 bp
    • E Value
      0E0
    • BLAST Score
      6,492.1 bits
    • Similarity
      99.14%
    • Coverage
      99.42%
    • Alignment (schematic)

      SEQ ID NO 1
      99.42% cov
      XM_511585
      88.35% cov
    • Alignment Length
      3,611 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227023
      XM_003262639
    • Hit length
      4,086 bp
    • E Value
      0E0
    • BLAST Score
      6,265 bits
    • Similarity
      98.01%
    • Coverage
      99.42%
    • Alignment (schematic)

      SEQ ID NO 1
      99.42% cov
      XM_003262639
      88.33% cov
    • Alignment Length
      3,613 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701536
      XM_002827723
    • Hit length
      4,021 bp
    • E Value
      0E0
    • BLAST Score
      6,119.1 bits
    • Similarity
      97.31%
    • Coverage
      99.39%
    • Alignment (schematic)

      SEQ ID NO 1
      99.39% cov
      XM_002827723
      89.58% cov
    • Alignment Length
      3,612 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273400
      XM_001109583
    • Hit length
      4,069 bp
    • E Value
      0E0
    • BLAST Score
      5,962.1 bits
    • Similarity
      96.54%
    • Coverage
      99.17%
    • Alignment (schematic)

      SEQ ID NO 1
      99.17% cov
      XM_001109583
      88.65% cov
    • Alignment Length
      3,615 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:294661792
      AB385116
    • Hit length
      2,948 bp
    • E Value
      0E0
    • BLAST Score
      5,367.5 bits
    • Similarity
      99.66%
    • Coverage
      80.9%
    • Alignment (schematic)

      SEQ ID NO 1
      80.9% cov
      AB385116
      99.59% cov
    • Alignment Length
      2,937 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194216760
      XM_001495274
    • Hit length
      3,098 bp
    • E Value
      0E0
    • BLAST Score
      4,239.2 bits
    • Similarity
      91.48%
    • Coverage
      85.17%
    • Alignment (schematic)

      SEQ ID NO 1
      85.17% cov
      XM_001495274
      99.52% cov
    • Alignment Length
      3,100 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301778282
      XM_002924525
    • Hit length
      3,123 bp
    • E Value
      0E0
    • BLAST Score
      3,903.1 bits
    • Similarity
      91.18%
    • Coverage
      79.39%
    • Alignment (schematic)

      SEQ ID NO 1
      79.39% cov
      XM_002924525
      92.06% cov
    • Alignment Length
      2,892 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73965382
      XM_848316
    • Hit length
      2,943 bp
    • E Value
      0E0
    • BLAST Score
      3,869.9 bits
    • Similarity
      90.44%
    • Coverage
      81.21%
    • Alignment (schematic)

      SEQ ID NO 1
      81.21% cov
      XM_848316
      99.93% cov
    • Alignment Length
      2,960 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291406380
      XM_002719206
    • Hit length
      3,321 bp
    • E Value
      0E0
    • BLAST Score
      3,825.5 bits
    • Similarity
      90.7%
    • Coverage
      79.39%
    • Alignment (schematic)

      SEQ ID NO 1
      79.39% cov
      XM_002719206
      86.57% cov
    • Alignment Length
      2,894 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:15284149
      NM_023913
    • Hit length
      3,976 bp
    • E Value
      0E0
    • BLAST Score
      3,683.3 bits
    • Similarity
      87.65%
    • Coverage
      87.85%
    • Alignment (schematic)

      SEQ ID NO 1
      87.85% cov
      NM_023913
      80.06% cov
    • Alignment Length
      3,214 bp
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
2
Length
977
Sequence Type
peptide
Locations
Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:3300094
      AAC25991
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      977 aa
    • E Value
      0E0
    • BLAST Score
      2,030.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAC25991
      100% cov
    • Alignment Length
      977 aa
    • CIGAR string
      977M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848840
      XP_511585
    • Hit length
      977 aa
    • E Value
      0E0
    • BLAST Score
      2,006.5 bits
    • Similarity
      99.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_511585
      100% cov
    • Alignment Length
      977 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227024
      XP_003262687
    • Hit length
      977 aa
    • E Value
      0E0
    • BLAST Score
      2,004.2 bits
    • Similarity
      99.59%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003262687
      100% cov
    • Alignment Length
      977 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273401
      XP_001109583
    • Hit length
      978 aa
    • E Value
      0E0
    • BLAST Score
      1,867.4 bits
    • Similarity
      98.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001109583
      100% cov
    • Alignment Length
      978 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73965383
      XP_853409
    • Hit length
      975 aa
    • E Value
      0E0
    • BLAST Score
      1,837.8 bits
    • Similarity
      96.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_853409
      100% cov
    • Alignment Length
      977 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701537
      XP_002827769
    • Hit length
      1,020 aa
    • E Value
      0E0
    • BLAST Score
      1,833.5 bits
    • Similarity
      98.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002827769
      95.59% cov
    • Alignment Length
      977 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301778283
      XP_002924571
      1 of 3 hits reported for Ailuropoda melanoleuca.
    • Hit length
      1,040 aa
    • E Value
      0E0
    • BLAST Score
      1,803.5 bits
    • Similarity
      96.66%
    • Coverage
      98.06%
    • Alignment (schematic)

      SEQ ID NO 2
      98.06% cov
      XP_002924571
      91.92% cov
    • Alignment Length
      958 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194216761
      XP_001495324
      1 of 2 hits reported for Equus caballus.
    • Hit length
      962 aa
    • E Value
      0E0
    • BLAST Score
      1,803.5 bits
    • Similarity
      97.29%
    • Coverage
      98.16%
    • Alignment (schematic)

      SEQ ID NO 2
      98.16% cov
      XP_001495324
      99.48% cov
    • Alignment Length
      959 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:194676265
      XP_001789529
    • Hit length
      985 aa
    • E Value
      0E0
    • BLAST Score
      1,798.1 bits
    • Similarity
      95.66%
    • Coverage
      99.08%
    • Alignment (schematic)

      SEQ ID NO 2
      99.08% cov
      XP_001789529
      97.66% cov
    • Alignment Length
      968 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291406381
      XP_002719252
    • Hit length
      1,106 aa
    • E Value
      0E0
    • BLAST Score
      1,773.8 bits
    • Similarity
      95.72%
    • Coverage
      98.16%
    • Alignment (schematic)

      SEQ ID NO 2
      98.16% cov
      XP_002719252
      86.53% cov
    • Alignment Length
      959 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:13249351
      NP_076402
    • Hit length
      977 aa
    • E Value
      0E0
    • BLAST Score
      1,770.4 bits
    • Similarity
      96.03%
    • Coverage
      98.06%
    • Alignment (schematic)

      SEQ ID NO 2
      98.06% cov
      NP_076402
      97.85% cov
    • Alignment Length
      958 aa
Occurrence
12 times in PatSeqDB
Tools
SEQ ID NO
3
Length
983
Sequence Type
peptide
Locations
Drawings
Declared organism
Caenorhabditis elegans
Determined organism
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:32563857
      NP_495701
      1 of 2 hits reported for Caenorhabditis elegans.
    • Hit length
      967 aa
    • E Value
      0E0
    • BLAST Score
      1,977.2 bits
    • Similarity
      98.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_495701
      100% cov
    • Alignment Length
      983 aa
    • CIGAR string
      147M16D820M mismatches: 0 - insertions: 0 - deletions: 16
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308509512
      XP_003116939
    • Hit length
      716 aa
    • E Value
      0E0
    • BLAST Score
      1,260.7 bits
    • Similarity
      93.24%
    • Coverage
      69.79%
    • Alignment (schematic)

      SEQ ID NO 3
      69.79% cov
      XP_003116939
      96.23% cov
    • Alignment Length
      695 aa
    • CIGAR string
      283H17MNMN3MN50M2NMN36MNMN2MN3MNMNMNMNM2NMN5DN2M3I2M2N4MDN6MN4M4NMN3M4NM3N15MNM2N2MN23M3IMN3M2N84MN13MN2MN2MNMN2M3NMN2M2NMN96MN19M2N21MNMN2MNMN2MN9M2N32MN11MN39MN32MN4MN11MN3MN4MN2MN3MN9MI2M2IMN3MN4M14H mismatches: 74 - insertions: 9 - deletions: 6
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268529690
      XP_002629971
    • Hit length
      839 aa
    • E Value
      0E0
    • BLAST Score
      1,155.6 bits
    • Similarity
      89.03%
    • Coverage
      70.09%
    • Alignment (schematic)

      SEQ ID NO 3
      70.09% cov
      XP_002629971
      82.24% cov
    • Alignment Length
      693 aa
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
4
Length
443
Sequence Type
peptide
Locations
Drawings
Declared organism
Saccharomyces cerevisiae
Determined organism
  • Saccharomyces cerevisiae

    Saccharomyces cerevisiae

    • Public DB hit
      GI:3836
      CAA77763
      1 of 4 hits reported for Saccharomyces cerevisiae.
    • Hit length
      1,115 aa
    • E Value
      0E0
    • BLAST Score
      916 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAA77763
      39.73% cov
    • Alignment Length
      443 aa
    • CIGAR string
      4MN438M mismatches: 1 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae S288c

    Saccharomyces cerevisiae S288c

    • Public DB hit
      GI:6321870
      NP_011946
      1 of 3 hits reported for Saccharomyces cerevisiae S288c.
    • Hit length
      1,115 aa
    • E Value
      0E0
    • BLAST Score
      915.6 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_011946
      39.73% cov
    • Alignment Length
      443 aa
    • CIGAR string
      4MN438M mismatches: 1 - insertions: 0 - deletions: 0
  • Saccharomyces cerevisiae JAY291

    Saccharomyces cerevisiae JAY291

    • Public DB hit
      GI:256269425
      EEU04720
    • Hit length
      1,115 aa
    • E Value
      0E0
    • BLAST Score
      915.6 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EEU04720
      39.73% cov
    • Alignment Length
      443 aa
  • Saccharomyces cerevisiae YJM789

    Saccharomyces cerevisiae YJM789

    • Public DB hit
      GI:151944024
      EDN62317
    • Hit length
      682 aa
    • E Value
      0E0
    • BLAST Score
      915.2 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EDN62317
      64.96% cov
    • Alignment Length
      443 aa
  • Saccharomyces cerevisiae AWRI1631

    Saccharomyces cerevisiae AWRI1631

    • Public DB hit
      GI:207344673
      EDZ71738
    • Hit length
      507 aa
    • E Value
      0E0
    • BLAST Score
      913.7 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EDZ71738
      87.38% cov
    • Alignment Length
      443 aa
  • Saccharomyces cerevisiae EC1118

    Saccharomyces cerevisiae EC1118

    • Public DB hit
      GI:259146832
      CAY80088
    • Hit length
      1,115 aa
    • E Value
      0E0
    • BLAST Score
      912.5 bits
    • Similarity
      99.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAY80088
      39.73% cov
    • Alignment Length
      443 aa
  • Saccharomyces cerevisiae Lalvin QA23

    Saccharomyces cerevisiae Lalvin QA23

    • Public DB hit
      GI:323348246
      EGA82495
    • Hit length
      1,108 aa
    • E Value
      0E0
    • BLAST Score
      912.1 bits
    • Similarity
      99.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EGA82495
      39.98% cov
    • Alignment Length
      443 aa
  • Ashbya gossypii ATCC 10895

    Ashbya gossypii ATCC 10895

    • Public DB hit
      GI:302307665
      NP_984389
    • Hit length
      1,134 aa
    • E Value
      2.15E-173
    • BLAST Score
      614 bits
    • Similarity
      80.09%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 4
      99.55% cov
      NP_984389
      39.33% cov
    • Alignment Length
      447 aa
  • Zygosaccharomyces rouxii CBS 732

    Zygosaccharomyces rouxii CBS 732

    • Public DB hit
      GI:254581810
      XP_002496890
    • Hit length
      1,152 aa
    • E Value
      8.69E-170
    • BLAST Score
      602.1 bits
    • Similarity
      78.92%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 4
      99.55% cov
      XP_002496890
      38.72% cov
    • Alignment Length
      446 aa
  • Vanderwaltozyma polyspora DSM 70294

    Vanderwaltozyma polyspora DSM 70294

    • Public DB hit
      GI:156836041
      XP_001642261
    • Hit length
      1,303 aa
    • E Value
      1.97E-161
    • BLAST Score
      574.3 bits
    • Similarity
      77.17%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 4
      99.55% cov
      XP_001642261
      35.23% cov
    • Alignment Length
      460 aa
  • Lachancea thermotolerans CBS 6340

    Lachancea thermotolerans CBS 6340

    • Public DB hit
      GI:255714733
      XP_002553648
    • Hit length
      1,118 aa
    • E Value
      2.2E-161
    • BLAST Score
      573.9 bits
    • Similarity
      76.98%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 4
      99.55% cov
      XP_002553648
      39.27% cov
    • Alignment Length
      443 aa
  • Kluyveromyces lactis NRRL Y-1140

    Kluyveromyces lactis NRRL Y-1140

    • Public DB hit
      GI:50307351
      XP_453654
    • Hit length
      1,152 aa
    • E Value
      4.86E-155
    • BLAST Score
      553.1 bits
    • Similarity
      76.46%
    • Coverage
      99.55%
    • Alignment (schematic)

      SEQ ID NO 4
      99.55% cov
      XP_453654
      38.63% cov
    • Alignment Length
      446 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
5
Length
8
Sequence Type
peptide
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334322886
      XP_003340314
    • Hit length
      1,180 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003340314
      0.68% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848840
      XP_511585
    • Hit length
      977 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_511585
      0.82% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227024
      XP_003262687
    • Hit length
      977 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003262687
      0.82% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327289958
      XP_003229691
      1 of 2 hits reported for Anolis carolinensis.
    • Hit length
      956 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003229691
      0.84% cov
    • Alignment Length
      8 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326930927
      XP_003211589
      1 of 2 hits reported for Meleagris gallopavo.
    • Hit length
      984 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003211589
      0.81% cov
    • Alignment Length
      8 aa
  • Trichophyton rubrum CBS 118892

    Trichophyton rubrum CBS 118892

    • Public DB hit
      GI:327295937
      XP_003232663
    • Hit length
      1,150 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003232663
      0.7% cov
    • Alignment Length
      8 aa
  • Arthroderma gypseum CBS 118893

    Arthroderma gypseum CBS 118893

    • Public DB hit
      GI:315045227
      XP_003171989
    • Hit length
      1,150 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003171989
      0.7% cov
    • Alignment Length
      8 aa
  • Pyrenophora teres f. teres 0-1

    Pyrenophora teres f. teres 0-1

    • Public DB hit
      GI:330917142
      XP_003297698
    • Hit length
      1,105 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003297698
      0.72% cov
    • Alignment Length
      8 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311266951
      XP_003131330
    • Hit length
      925 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003131330
      0.86% cov
    • Alignment Length
      8 aa
  • Puccinia graminis f. sp. tritici CRL 75-36-700-3

    Puccinia graminis f. sp. tritici CRL 75-36-700-3

    • Public DB hit
      GI:331242458
      XP_003333875
    • Hit length
      1,066 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003333875
      0.75% cov
    • Alignment Length
      8 aa
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308509512
      XP_003116939
    • Hit length
      716 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003116939
      1.12% cov
    • Alignment Length
      8 aa
  • Loa loa

    Loa loa

    • Public DB hit
      GI:312066271
      XP_003136191
    • Hit length
      665 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003136191
      1.2% cov
    • Alignment Length
      8 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301778283
      XP_002924571
    • Hit length
      1,040 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002924571
      0.77% cov
    • Alignment Length
      8 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301614498
      XP_002936726
    • Hit length
      581 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002936726
      1.38% cov
    • Alignment Length
      8 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701537
      XP_002827769
    • Hit length
      1,020 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002827769
      0.78% cov
    • Alignment Length
      8 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273401
      XP_001109583
    • Hit length
      978 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001109583
      0.82% cov
    • Alignment Length
      8 aa
  • Tuber melanosporum Mel28

    Tuber melanosporum Mel28

    • Public DB hit
      GI:296424345
      XP_002841709
    • Hit length
      1,223 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002841709
      0.65% cov
    • Alignment Length
      8 aa
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:292609464
      XP_001919350
    • Hit length
      921 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001919350
      0.87% cov
    • Alignment Length
      8 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291406381
      XP_002719252
    • Hit length
      1,106 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002719252
      0.72% cov
    • Alignment Length
      8 aa
  • Trichophyton verrucosum HKI 0517

    Trichophyton verrucosum HKI 0517

    • Public DB hit
      GI:302652895
      XP_003018287
    • Hit length
      1,131 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003018287
      0.71% cov
    • Alignment Length
      8 aa
  • Arthroderma benhamiae CBS 112371

    Arthroderma benhamiae CBS 112371

    • Public DB hit
      GI:302505763
      XP_003014588
    • Hit length
      1,131 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003014588
      0.71% cov
    • Alignment Length
      8 aa
  • Coccidioides posadasii C735 delta SOWgp

    Coccidioides posadasii C735 delta SOWgp

    • Public DB hit
      GI:303323925
      XP_003071950
    • Hit length
      1,184 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003071950
      0.68% cov
    • Alignment Length
      8 aa
  • Candida tropicalis MYA-3404

    Candida tropicalis MYA-3404

    • Public DB hit
      GI:255729848
      XP_002549849
    • Hit length
      1,217 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002549849
      0.66% cov
    • Alignment Length
      8 aa
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
6
Length
9
Sequence Type
nucleotide
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
7
Length
24
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
8
Length
8
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334322886
      XP_003340314
    • Hit length
      1,180 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003340314
      0.68% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848840
      XP_511585
    • Hit length
      977 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_511585
      0.82% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227024
      XP_003262687
    • Hit length
      977 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003262687
      0.82% cov
    • Alignment Length
      8 aa
    • CIGAR string
      8M mismatches: 0 - insertions: 0 - deletions: 0
  • Anolis carolinensis

    Anolis carolinensis

    • Public DB hit
      GI:327289958
      XP_003229691
      1 of 2 hits reported for Anolis carolinensis.
    • Hit length
      956 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003229691
      0.84% cov
    • Alignment Length
      8 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326930927
      XP_003211589
      1 of 2 hits reported for Meleagris gallopavo.
    • Hit length
      984 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003211589
      0.81% cov
    • Alignment Length
      8 aa
  • Trichophyton rubrum CBS 118892

    Trichophyton rubrum CBS 118892

    • Public DB hit
      GI:327295937
      XP_003232663
    • Hit length
      1,150 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003232663
      0.7% cov
    • Alignment Length
      8 aa
  • Arthroderma gypseum CBS 118893

    Arthroderma gypseum CBS 118893

    • Public DB hit
      GI:315045227
      XP_003171989
    • Hit length
      1,150 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003171989
      0.7% cov
    • Alignment Length
      8 aa
  • Pyrenophora teres f. teres 0-1

    Pyrenophora teres f. teres 0-1

    • Public DB hit
      GI:330917142
      XP_003297698
    • Hit length
      1,105 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003297698
      0.72% cov
    • Alignment Length
      8 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311266951
      XP_003131330
    • Hit length
      925 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003131330
      0.86% cov
    • Alignment Length
      8 aa
  • Puccinia graminis f. sp. tritici CRL 75-36-700-3

    Puccinia graminis f. sp. tritici CRL 75-36-700-3

    • Public DB hit
      GI:331242458
      XP_003333875
    • Hit length
      1,066 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003333875
      0.75% cov
    • Alignment Length
      8 aa
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308509512
      XP_003116939
    • Hit length
      716 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003116939
      1.12% cov
    • Alignment Length
      8 aa
  • Loa loa

    Loa loa

    • Public DB hit
      GI:312066271
      XP_003136191
    • Hit length
      665 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003136191
      1.2% cov
    • Alignment Length
      8 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301778283
      XP_002924571
    • Hit length
      1,040 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002924571
      0.77% cov
    • Alignment Length
      8 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301614498
      XP_002936726
    • Hit length
      581 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002936726
      1.38% cov
    • Alignment Length
      8 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701537
      XP_002827769
    • Hit length
      1,020 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002827769
      0.78% cov
    • Alignment Length
      8 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273401
      XP_001109583
    • Hit length
      978 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001109583
      0.82% cov
    • Alignment Length
      8 aa
  • Tuber melanosporum Mel28

    Tuber melanosporum Mel28

    • Public DB hit
      GI:296424345
      XP_002841709
    • Hit length
      1,223 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002841709
      0.65% cov
    • Alignment Length
      8 aa
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:292609464
      XP_001919350
    • Hit length
      921 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001919350
      0.87% cov
    • Alignment Length
      8 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291406381
      XP_002719252
    • Hit length
      1,106 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002719252
      0.72% cov
    • Alignment Length
      8 aa
  • Trichophyton verrucosum HKI 0517

    Trichophyton verrucosum HKI 0517

    • Public DB hit
      GI:302652895
      XP_003018287
    • Hit length
      1,131 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003018287
      0.71% cov
    • Alignment Length
      8 aa
  • Arthroderma benhamiae CBS 112371

    Arthroderma benhamiae CBS 112371

    • Public DB hit
      GI:302505763
      XP_003014588
    • Hit length
      1,131 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003014588
      0.71% cov
    • Alignment Length
      8 aa
  • Coccidioides posadasii C735 delta SOWgp

    Coccidioides posadasii C735 delta SOWgp

    • Public DB hit
      GI:303323925
      XP_003071950
    • Hit length
      1,184 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003071950
      0.68% cov
    • Alignment Length
      8 aa
  • Candida tropicalis MYA-3404

    Candida tropicalis MYA-3404

    • Public DB hit
      GI:255729848
      XP_002549849
    • Hit length
      1,217 aa
    • E Value
      9.77E1
    • BLAST Score
      29.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002549849
      0.66% cov
    • Alignment Length
      8 aa
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
9
Length
28
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
10
Length
21
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332848839
      XM_511585
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,085 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_511585
      0.51% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332227023
      XM_003262639
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      4,086 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003262639
      0.51% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701536
      XM_002827723
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      4,021 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002827723
      0.52% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273400
      XM_001109583
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      4,069 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001109583
      0.52% cov
    • Alignment Length
      21 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296201818
      XM_002748122
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      2,682 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002748122
      0.78% cov
    • Alignment Length
      21 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291406380
      XM_002719206
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      3,321 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002719206
      0.63% cov
    • Alignment Length
      21 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:153946420
      NM_001433
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      4,005 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001433
      0.52% cov
    • Alignment Length
      21 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:294661792
      AB385116
    • Hit length
      2,948 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AB385116
      0.71% cov
    • Alignment Length
      21 bp
Occurrence
2 times in PatSeqDB
Tools

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