Functionalization Of Rna Oligonucleotides

  • Published: Jan 31, 2013
  • Earliest Priority: Jul 25 2011
  • Family: 2
  • Cited Works: 35
  • Cited by: 12
  • Cites: 4
  • Sequences: 7
  • Additional Info: Cited Works Full text
Data obtained from: NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings DDBJ Pat
7 sequences found in this patent (in total)

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Download sequences in fasta format: 4 RNAs 3 DNAs

Displaying 7 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
30
Sequence Type
RNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
2
Length
22
Sequence Type
RNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF927991
      0.25% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV21

    Cloning vector pPLV21

    • Public DB hit
      GI:334085830
      JF909474
    • Hit length
      6,151 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909474
      0.36% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV20

    Cloning vector pPLV20

    • Public DB hit
      GI:334085826
      JF909473
    • Hit length
      5,797 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909473
      0.38% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV19

    Cloning vector pPLV19

    • Public DB hit
      GI:334085822
      JF909472
    • Hit length
      5,443 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909472
      0.4% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV09

    Cloning vector pPLV09

    • Public DB hit
      GI:334085784
      JF909462
    • Hit length
      6,181 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909462
      0.36% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV08

    Cloning vector pPLV08

    • Public DB hit
      GI:334085780
      JF909461
    • Hit length
      5,827 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909461
      0.38% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV07

    Cloning vector pPLV07

    • Public DB hit
      GI:334085776
      JF909460
    • Hit length
      5,473 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909460
      0.4% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV04

    Cloning vector pPLV04

    • Public DB hit
      GI:334085764
      JF909457
    • Hit length
      7,269 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      JF909457
      0.3% cov
    • Alignment Length
      22 bp
  • Binary vector pCMIRT15

    Binary vector pCMIRT15

    • Public DB hit
      GI:333974682
      HQ540318
    • Hit length
      10,759 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HQ540318
      0.2% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:333755434
      HQ161727
      1 of 7 hits reported for synthetic construct.
    • Hit length
      1,745 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      HQ161727
      1.26% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW45

    Gateway vector pUGW45

    • Public DB hit
      GI:332144812
      AB626686
    • Hit length
      6,711 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626686
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW44

    Gateway vector pUGW44

    • Public DB hit
      GI:332144808
      AB626685
    • Hit length
      6,727 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626685
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW42

    Gateway vector pUGW42

    • Public DB hit
      GI:332144804
      AB626684
    • Hit length
      6,711 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626684
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW41

    Gateway vector pUGW41

    • Public DB hit
      GI:332144800
      AB626683
    • Hit length
      6,727 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626683
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW6

    Gateway vector pUGW6

    • Public DB hit
      GI:332144730
      AB626666
    • Hit length
      6,714 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626666
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW5

    Gateway vector pUGW5

    • Public DB hit
      GI:332144725
      AB626665
    • Hit length
      6,717 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626665
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW4

    Gateway vector pUGW4

    • Public DB hit
      GI:332144720
      AB626664
    • Hit length
      5,858 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626664
      0.38% cov
    • Alignment Length
      22 bp
  • Gateway vector pnYGW

    Gateway vector pnYGW

    • Public DB hit
      GI:332144403
      AB626694
    • Hit length
      6,516 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626694
      0.34% cov
    • Alignment Length
      22 bp
  • Gateway vector pGWnY

    Gateway vector pGWnY

    • Public DB hit
      GI:332144398
      AB626693
    • Hit length
      6,535 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AB626693
      0.34% cov
    • Alignment Length
      22 bp
Occurrence
101 times in PatSeqDB
Tools
SEQ ID NO
3
Length
22
Sequence Type
RNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Cloning vector pBOB

    Cloning vector pBOB

    • Public DB hit
      GI:335355349
      JF927991
    • Hit length
      8,730 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF927991
      0.25% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV21

    Cloning vector pPLV21

    • Public DB hit
      GI:334085830
      JF909474
    • Hit length
      6,151 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909474
      0.36% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV20

    Cloning vector pPLV20

    • Public DB hit
      GI:334085826
      JF909473
    • Hit length
      5,797 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909473
      0.38% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pPLV19

    Cloning vector pPLV19

    • Public DB hit
      GI:334085822
      JF909472
    • Hit length
      5,443 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909472
      0.4% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV09

    Cloning vector pPLV09

    • Public DB hit
      GI:334085784
      JF909462
    • Hit length
      6,181 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909462
      0.36% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV08

    Cloning vector pPLV08

    • Public DB hit
      GI:334085780
      JF909461
    • Hit length
      5,827 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909461
      0.38% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV07

    Cloning vector pPLV07

    • Public DB hit
      GI:334085776
      JF909460
    • Hit length
      5,473 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909460
      0.4% cov
    • Alignment Length
      22 bp
  • Cloning vector pPLV04

    Cloning vector pPLV04

    • Public DB hit
      GI:334085764
      JF909457
    • Hit length
      7,269 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      JF909457
      0.3% cov
    • Alignment Length
      22 bp
  • Binary vector pCMIRT15

    Binary vector pCMIRT15

    • Public DB hit
      GI:333974682
      HQ540318
    • Hit length
      10,759 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      HQ540318
      0.2% cov
    • Alignment Length
      22 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:333755434
      HQ161727
      1 of 7 hits reported for synthetic construct.
    • Hit length
      1,745 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      HQ161727
      1.26% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW45

    Gateway vector pUGW45

    • Public DB hit
      GI:332144812
      AB626686
    • Hit length
      6,711 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626686
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW44

    Gateway vector pUGW44

    • Public DB hit
      GI:332144808
      AB626685
    • Hit length
      6,727 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626685
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW42

    Gateway vector pUGW42

    • Public DB hit
      GI:332144804
      AB626684
    • Hit length
      6,711 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626684
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW41

    Gateway vector pUGW41

    • Public DB hit
      GI:332144800
      AB626683
    • Hit length
      6,727 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626683
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW6

    Gateway vector pUGW6

    • Public DB hit
      GI:332144730
      AB626666
    • Hit length
      6,714 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626666
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW5

    Gateway vector pUGW5

    • Public DB hit
      GI:332144725
      AB626665
    • Hit length
      6,717 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626665
      0.33% cov
    • Alignment Length
      22 bp
  • Gateway vector pUGW4

    Gateway vector pUGW4

    • Public DB hit
      GI:332144720
      AB626664
    • Hit length
      5,858 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626664
      0.38% cov
    • Alignment Length
      22 bp
  • Gateway vector pnYGW

    Gateway vector pnYGW

    • Public DB hit
      GI:332144403
      AB626694
    • Hit length
      6,516 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626694
      0.34% cov
    • Alignment Length
      22 bp
  • Gateway vector pGWnY

    Gateway vector pGWnY

    • Public DB hit
      GI:332144398
      AB626693
    • Hit length
      6,535 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB626693
      0.34% cov
    • Alignment Length
      22 bp
Occurrence
48 times in PatSeqDB
Tools
SEQ ID NO
4
Length
34
Sequence Type
RNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
5
Length
64
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
6
Length
54
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
7
Length
17
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Gossypium hirsutum

    Gossypium hirsutum

    • Public DB hit
      GI:188485030
      EU540992
    • Hit length
      25 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EU540992
      68% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Chlamydomonas reinhardtii

    Chlamydomonas reinhardtii

    • Public DB hit
      GI:133927810
      EF497005
      1 of 4 hits reported for Chlamydomonas reinhardtii.
    • Hit length
      19 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF497005
      89.47% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
83 times in PatSeqDB
Tools

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