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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat

12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO

Length

Type

Locations

Organisms

Occurrence

Tools

SEQ ID NO

Length

100

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP002729

0% cov

Alignment Length
73 bp

CIGAR string
73M27H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AP012030

0% cov

Alignment Length
73 bp

CIGAR string
73M27H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Public DB hit
GI:313848522
AM946981
1 of 2 hits reported for Escherichia coli BL21(DE3).

Hit length
4,558,947 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AM946981

0% cov

Alignment Length
73 bp

CIGAR string
73M27H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
FN649414

0% cov

Alignment Length
73 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AP010960

0% cov

Alignment Length
73 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AP010958

0% cov

Alignment Length
73 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AP010953

0% cov

Alignment Length
73 bp
Escherichia coli B str. REL606
Escherichia coli B str. REL606
Public DB hit
GI:253972022
CP000819

Hit length
4,629,812 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP000819

0% cov

Alignment Length
73 bp
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Public DB hit
GI:253322479
CP001665

Hit length
4,570,938 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP001665

0% cov

Alignment Length
73 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP001396

0% cov

Alignment Length
73 bp
Escherichia coli str. K-12 substr. DH10B
Escherichia coli str. K-12 substr. DH10B
Public DB hit
GI:169887498
CP000948

Hit length
4,686,137 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP000948

0% cov

Alignment Length
73 bp
Escherichia coli str. K-12 substr. W3110
Escherichia coli str. K-12 substr. W3110
Public DB hit
GI:85674274
AP009048

Hit length
4,646,332 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
AP009048

0% cov

Alignment Length
73 bp
Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
Public DB hit
GI:48994873
U00096
1 of 2 hits reported for Escherichia coli str. K-12 substr. MG1655.

Hit length
4,639,675 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
U00096

0% cov

Alignment Length
73 bp
Escherichia coli
Escherichia coli
Public DB hit
GI:146044
M27177
1 of 3 hits reported for Escherichia coli.

Hit length
1,690 bp

E Value
3.42E-29

BLAST Score
135.9 bits

Similarity

100%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
M27177

4.32% cov

Alignment Length
73 bp
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP002516

0% cov

Alignment Length
73 bp
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP002185

0% cov

Alignment Length
73 bp
Escherichia coli O55:H7 str. CB9615
Escherichia coli O55:H7 str. CB9615
Public DB hit
GI:290760697
CP001846

Hit length
5,386,352 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP001846

0% cov

Alignment Length
73 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP001383

0% cov

Alignment Length
73 bp
Escherichia coli O157:H7 str. TW14359
Escherichia coli O157:H7 str. TW14359
Public DB hit
GI:254590536
CP001368

Hit length
5,528,136 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CP001368

0% cov

Alignment Length
73 bp
Escherichia coli UMN026
Escherichia coli UMN026
Public DB hit
GI:218430358
CU928163

Hit length
5,202,090 bp

E Value
1.59E-27

BLAST Score
130.4 bits

Similarity

98.63%

Coverage

73%

Alignment (schematic)

SEQ ID NO 1

73% cov
CU928163

0% cov

Alignment Length
73 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

100

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP002729

0% cov

Alignment Length
74 bp

CIGAR string
74M26H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP002516

0% cov

Alignment Length
74 bp

CIGAR string
74M26H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
AP012030

0% cov

Alignment Length
74 bp

CIGAR string
74M26H mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP002185

0% cov

Alignment Length
74 bp
Escherichia coli O83:H1 str. NRG 857C
Escherichia coli O83:H1 str. NRG 857C
Public DB hit
GI:312944605
CP001855

Hit length
4,747,819 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001855

0% cov

Alignment Length
74 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
FN649414

0% cov

Alignment Length
74 bp
Escherichia coli ABU 83972
Escherichia coli ABU 83972
Public DB hit
GI:307551844
CP001671

Hit length
5,131,397 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001671

0% cov

Alignment Length
74 bp
Escherichia coli O55:H7 str. CB9615
Escherichia coli O55:H7 str. CB9615
Public DB hit
GI:290760697
CP001846

Hit length
5,386,352 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001846

0% cov

Alignment Length
74 bp
Escherichia coli 042
Escherichia coli 042
Public DB hit
GI:284919779
FN554766

Hit length
5,241,977 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
FN554766

0% cov

Alignment Length
74 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001383

0% cov

Alignment Length
74 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
AP010960

0% cov

Alignment Length
74 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
AP010958

0% cov

Alignment Length
74 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
AP010953

0% cov

Alignment Length
74 bp
Escherichia coli O157:H7 str. TW14359
Escherichia coli O157:H7 str. TW14359
Public DB hit
GI:254590536
CP001368

Hit length
5,528,136 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001368

0% cov

Alignment Length
74 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001396

0% cov

Alignment Length
74 bp
Escherichia coli LF82
Escherichia coli LF82
Public DB hit
GI:222031834
CU651637

Hit length
4,773,108 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU651637

0% cov

Alignment Length
74 bp
Escherichia coli UMN026
Escherichia coli UMN026
Public DB hit
GI:218430358
CU928163

Hit length
5,202,090 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU928163

0% cov

Alignment Length
74 bp
Escherichia coli ED1a
Escherichia coli ED1a
Public DB hit
GI:218425442
CU928162

Hit length
5,209,548 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU928162

0% cov

Alignment Length
74 bp
Escherichia coli IAI39
Escherichia coli IAI39
Public DB hit
GI:218368405
CU928164

Hit length
5,132,068 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU928164

0% cov

Alignment Length
74 bp
Escherichia coli IAI1
Escherichia coli IAI1
Public DB hit
GI:218359353
CU928160

Hit length
4,700,560 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU928160

0% cov

Alignment Length
74 bp
Escherichia coli 55989
Escherichia coli 55989
Public DB hit
GI:218350208
CU928145

Hit length
5,154,862 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CU928145

0% cov

Alignment Length
74 bp
Escherichia coli O127:H6 str. E2348/69
Escherichia coli O127:H6 str. E2348/69
Public DB hit
GI:215263233
FM180568

Hit length
4,965,553 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
FM180568

0% cov

Alignment Length
74 bp
Escherichia coli SE11
Escherichia coli SE11
Public DB hit
GI:209910450
AP009240

Hit length
4,887,515 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
AP009240

0% cov

Alignment Length
74 bp
Escherichia coli O157:H7 str. EC4115
Escherichia coli O157:H7 str. EC4115
Public DB hit
GI:209157093
CP001164

Hit length
5,572,075 bp

E Value
9.51E-30

BLAST Score
137.8 bits

Similarity

100%

Coverage

74%

Alignment (schematic)

SEQ ID NO 2

74% cov
CP001164

0% cov

Alignment Length
74 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli NA114
Escherichia coli NA114
Public DB hit
GI:333968017
CP002797

Hit length
4,935,241 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP002797

0% cov

Alignment Length
26 bp

CIGAR string
26M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP002729

0% cov

Alignment Length
26 bp

CIGAR string
26M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP002516

0% cov

Alignment Length
26 bp

CIGAR string
26M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AP012030

0% cov

Alignment Length
26 bp
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP002185

0% cov

Alignment Length
26 bp
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Public DB hit
GI:313848522
AM946981
1 of 2 hits reported for Escherichia coli BL21(DE3).

Hit length
4,558,947 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AM946981

0% cov

Alignment Length
26 bp
Escherichia coli O83:H1 str. NRG 857C
Escherichia coli O83:H1 str. NRG 857C
Public DB hit
GI:312944605
CP001855

Hit length
4,747,819 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001855

0% cov

Alignment Length
26 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
FN649414

0% cov

Alignment Length
26 bp
Escherichia coli UM146
Escherichia coli UM146
Public DB hit
GI:307625127
CP002167

Hit length
4,993,013 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP002167

0% cov

Alignment Length
26 bp
Escherichia coli ABU 83972
Escherichia coli ABU 83972
Public DB hit
GI:307551844
CP001671

Hit length
5,131,397 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001671

0% cov

Alignment Length
26 bp
Escherichia coli IHE3034
Escherichia coli IHE3034
Public DB hit
GI:294489418
CP001969

Hit length
5,108,383 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001969

0% cov

Alignment Length
26 bp
Escherichia coli O55:H7 str. CB9615
Escherichia coli O55:H7 str. CB9615
Public DB hit
GI:290760697
CP001846

Hit length
5,386,352 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001846

0% cov

Alignment Length
26 bp
Escherichia coli 042
Escherichia coli 042
Public DB hit
GI:284919779
FN554766

Hit length
5,241,977 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
FN554766

0% cov

Alignment Length
26 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001383

0% cov

Alignment Length
26 bp
Escherichia coli SE15
Escherichia coli SE15
Public DB hit
GI:281177210
AP009378

Hit length
4,717,338 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AP009378

0% cov

Alignment Length
26 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AP010960

0% cov

Alignment Length
26 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AP010958

0% cov

Alignment Length
26 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
AP010953

0% cov

Alignment Length
26 bp
Escherichia coli O157:H7 str. TW14359
Escherichia coli O157:H7 str. TW14359
Public DB hit
GI:254590536
CP001368

Hit length
5,528,136 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001368

0% cov

Alignment Length
26 bp
Escherichia coli B str. REL606
Escherichia coli B str. REL606
Public DB hit
GI:253972022
CP000819

Hit length
4,629,812 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP000819

0% cov

Alignment Length
26 bp
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Public DB hit
GI:253322479
CP001665

Hit length
4,570,938 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001665

0% cov

Alignment Length
26 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CP001396

0% cov

Alignment Length
26 bp
Escherichia coli LF82
Escherichia coli LF82
Public DB hit
GI:222031834
CU651637

Hit length
4,773,108 bp

E Value
6.17E-5

BLAST Score
52 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 3

100% cov
CU651637

0% cov

Alignment Length
26 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP002729

0% cov

Alignment Length
27 bp

CIGAR string
27M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP002516

0% cov

Alignment Length
27 bp

CIGAR string
27M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AP012030

0% cov

Alignment Length
27 bp

CIGAR string
27M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP002185

0% cov

Alignment Length
27 bp
Escherichia coli O83:H1 str. NRG 857C
Escherichia coli O83:H1 str. NRG 857C
Public DB hit
GI:312944605
CP001855

Hit length
4,747,819 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001855

0% cov

Alignment Length
27 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
FN649414

0% cov

Alignment Length
27 bp
Escherichia coli ABU 83972
Escherichia coli ABU 83972
Public DB hit
GI:307551844
CP001671

Hit length
5,131,397 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001671

0% cov

Alignment Length
27 bp
Escherichia coli O55:H7 str. CB9615
Escherichia coli O55:H7 str. CB9615
Public DB hit
GI:290760697
CP001846

Hit length
5,386,352 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001846

0% cov

Alignment Length
27 bp
Escherichia coli 042
Escherichia coli 042
Public DB hit
GI:284919779
FN554766

Hit length
5,241,977 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
FN554766

0% cov

Alignment Length
27 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001383

0% cov

Alignment Length
27 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AP010960

0% cov

Alignment Length
27 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AP010958

0% cov

Alignment Length
27 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AP010953

0% cov

Alignment Length
27 bp
Escherichia coli O157:H7 str. TW14359
Escherichia coli O157:H7 str. TW14359
Public DB hit
GI:254590536
CP001368

Hit length
5,528,136 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001368

0% cov

Alignment Length
27 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001396

0% cov

Alignment Length
27 bp
Escherichia coli LF82
Escherichia coli LF82
Public DB hit
GI:222031834
CU651637

Hit length
4,773,108 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU651637

0% cov

Alignment Length
27 bp
Escherichia coli UMN026
Escherichia coli UMN026
Public DB hit
GI:218430358
CU928163

Hit length
5,202,090 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU928163

0% cov

Alignment Length
27 bp
Escherichia coli ED1a
Escherichia coli ED1a
Public DB hit
GI:218425442
CU928162

Hit length
5,209,548 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU928162

0% cov

Alignment Length
27 bp
Escherichia coli IAI39
Escherichia coli IAI39
Public DB hit
GI:218368405
CU928164

Hit length
5,132,068 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU928164

0% cov

Alignment Length
27 bp
Escherichia coli IAI1
Escherichia coli IAI1
Public DB hit
GI:218359353
CU928160

Hit length
4,700,560 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU928160

0% cov

Alignment Length
27 bp
Escherichia coli 55989
Escherichia coli 55989
Public DB hit
GI:218350208
CU928145

Hit length
5,154,862 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CU928145

0% cov

Alignment Length
27 bp
Escherichia coli O127:H6 str. E2348/69
Escherichia coli O127:H6 str. E2348/69
Public DB hit
GI:215263233
FM180568

Hit length
4,965,553 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
FM180568

0% cov

Alignment Length
27 bp
Escherichia coli SE11
Escherichia coli SE11
Public DB hit
GI:209910450
AP009240

Hit length
4,887,515 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
AP009240

0% cov

Alignment Length
27 bp
Escherichia coli O157:H7 str. EC4115
Escherichia coli O157:H7 str. EC4115
Public DB hit
GI:209157093
CP001164

Hit length
5,572,075 bp

E Value
1.78E-5

BLAST Score
54 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 4

100% cov
CP001164

0% cov

Alignment Length
27 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP002729

0% cov

Alignment Length
45 bp

CIGAR string
8H3MN41M mismatches: 1 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP002516

0% cov

Alignment Length
45 bp

CIGAR string
8H3MN41M mismatches: 1 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP012030

0% cov

Alignment Length
45 bp

CIGAR string
8H3MN41M mismatches: 1 - insertions: 0 - deletions: 0
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP002185

0% cov

Alignment Length
45 bp
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Public DB hit
GI:313848522
AM946981
1 of 2 hits reported for Escherichia coli BL21(DE3).

Hit length
4,558,947 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AM946981

0% cov

Alignment Length
45 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
FN649414

0% cov

Alignment Length
45 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP001383

0% cov

Alignment Length
45 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP010960

0% cov

Alignment Length
45 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP010958

0% cov

Alignment Length
45 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP010953

0% cov

Alignment Length
45 bp
Escherichia coli B str. REL606
Escherichia coli B str. REL606
Public DB hit
GI:253972022
CP000819

Hit length
4,629,812 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP000819

0% cov

Alignment Length
45 bp
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Public DB hit
GI:253322479
CP001665

Hit length
4,570,938 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP001665

0% cov

Alignment Length
45 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP001396

0% cov

Alignment Length
45 bp
Escherichia coli IAI1
Escherichia coli IAI1
Public DB hit
GI:218359353
CU928160

Hit length
4,700,560 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CU928160

0% cov

Alignment Length
45 bp
Escherichia coli 55989
Escherichia coli 55989
Public DB hit
GI:218350208
CU928145

Hit length
5,154,862 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CU928145

0% cov

Alignment Length
45 bp
Escherichia coli SE11
Escherichia coli SE11
Public DB hit
GI:209910450
AP009240

Hit length
4,887,515 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP009240

0% cov

Alignment Length
45 bp
Shigella boydii CDC 3083-94
Shigella boydii CDC 3083-94
Public DB hit
GI:187427012
CP001063

Hit length
4,615,997 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP001063

0% cov

Alignment Length
45 bp
Escherichia coli ATCC 8739
Escherichia coli ATCC 8739
Public DB hit
GI:169752989
CP000946

Hit length
4,746,218 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP000946

0% cov

Alignment Length
45 bp
Escherichia coli E24377A
Escherichia coli E24377A
Public DB hit
GI:157076741
CP000800

Hit length
4,979,619 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP000800

0% cov

Alignment Length
45 bp
Escherichia coli HS
Escherichia coli HS
Public DB hit
GI:157065147
CP000802

Hit length
4,643,538 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP000802

0% cov

Alignment Length
45 bp
Shigella flexneri 5 str. 8401
Shigella flexneri 5 str. 8401
Public DB hit
GI:110613622
CP000266

Hit length
4,574,284 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
CP000266

0% cov

Alignment Length
45 bp
Shigella flexneri 2a str. 301
Shigella flexneri 2a str. 301
Public DB hit
GI:24080789
AE005674

Hit length
4,607,203 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AE005674

0% cov

Alignment Length
45 bp
Escherichia coli str. K-12 substr. W3110
Escherichia coli str. K-12 substr. W3110
Public DB hit
GI:85674274
AP009048

Hit length
4,646,332 bp

E Value
2.01E-12

BLAST Score
78.7 bits

Similarity

97.78%

Coverage

84.91%

Alignment (schematic)

SEQ ID NO 5

84.91% cov
AP009048

0% cov

Alignment Length
45 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP002729

0% cov

Alignment Length
31 bp

CIGAR string
16H31M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP002516

0% cov

Alignment Length
31 bp

CIGAR string
16H31M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP012030

0% cov

Alignment Length
31 bp

CIGAR string
16H31M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP002185

0% cov

Alignment Length
31 bp
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Public DB hit
GI:313848522
AM946981
1 of 2 hits reported for Escherichia coli BL21(DE3).

Hit length
4,558,947 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AM946981

0% cov

Alignment Length
31 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
FN649414

0% cov

Alignment Length
31 bp
Shigella flexneri 2002017
Shigella flexneri 2002017
Public DB hit
GI:281599365
CP001383

Hit length
4,650,856 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP001383

0% cov

Alignment Length
31 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP010960

0% cov

Alignment Length
31 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP010958

0% cov

Alignment Length
31 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP010953

0% cov

Alignment Length
31 bp
Escherichia coli B str. REL606
Escherichia coli B str. REL606
Public DB hit
GI:253972022
CP000819

Hit length
4,629,812 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP000819

0% cov

Alignment Length
31 bp
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Public DB hit
GI:253322479
CP001665

Hit length
4,570,938 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP001665

0% cov

Alignment Length
31 bp
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP001396

0% cov

Alignment Length
31 bp
Escherichia coli IAI1
Escherichia coli IAI1
Public DB hit
GI:218359353
CU928160

Hit length
4,700,560 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CU928160

0% cov

Alignment Length
31 bp
Escherichia coli 55989
Escherichia coli 55989
Public DB hit
GI:218350208
CU928145

Hit length
5,154,862 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CU928145

0% cov

Alignment Length
31 bp
Escherichia coli SE11
Escherichia coli SE11
Public DB hit
GI:209910450
AP009240

Hit length
4,887,515 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP009240

0% cov

Alignment Length
31 bp
Shigella boydii CDC 3083-94
Shigella boydii CDC 3083-94
Public DB hit
GI:187427012
CP001063

Hit length
4,615,997 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP001063

0% cov

Alignment Length
31 bp
Escherichia coli E24377A
Escherichia coli E24377A
Public DB hit
GI:157076741
CP000800

Hit length
4,979,619 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP000800

0% cov

Alignment Length
31 bp
Shigella flexneri 5 str. 8401
Shigella flexneri 5 str. 8401
Public DB hit
GI:110613622
CP000266

Hit length
4,574,284 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
CP000266

0% cov

Alignment Length
31 bp
Shigella flexneri 2a str. 301
Shigella flexneri 2a str. 301
Public DB hit
GI:24080789
AE005674

Hit length
4,607,203 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AE005674

0% cov

Alignment Length
31 bp
Escherichia coli str. K-12 substr. W3110
Escherichia coli str. K-12 substr. W3110
Public DB hit
GI:85674274
AP009048

Hit length
4,646,332 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AP009048

0% cov

Alignment Length
31 bp
Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
Public DB hit
GI:48994873
U00096

Hit length
4,639,675 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
U00096

0% cov

Alignment Length
31 bp
Shigella flexneri 2a str. 2457T
Shigella flexneri 2a str. 2457T
Public DB hit
GI:30043918
AE014073

Hit length
4,599,354 bp

E Value
2.47E-7

BLAST Score
61.9 bits

Similarity

100%

Coverage

65.96%

Alignment (schematic)

SEQ ID NO 6

65.96% cov
AE014073

0% cov

Alignment Length
31 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli NA114
Escherichia coli NA114
Public DB hit
GI:333968017
CP002797

Hit length
4,935,241 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP002797

0% cov

Alignment Length
35 bp

CIGAR string
19H35M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli UMNK88
Escherichia coli UMNK88
Public DB hit
GI:332341332
CP002729

Hit length
5,186,416 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP002729

0% cov

Alignment Length
35 bp

CIGAR string
19H35M mismatches: 0 - insertions: 0 - deletions: 0
Reporter vector pHonda1
Reporter vector pHonda1
Public DB hit
GI:325462540
JF313243

Hit length
12,146 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
JF313243

0.29% cov

Alignment Length
35 bp

CIGAR string
19H35M mismatches: 0 - insertions: 0 - deletions: 0
Escherichia coli KO11FL
Escherichia coli KO11FL
Public DB hit
GI:323376397
CP002516

Hit length
4,920,168 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP002516

0% cov

Alignment Length
35 bp
Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AP012030

0% cov

Alignment Length
35 bp
Escherichia coli W
Escherichia coli W
Public DB hit
GI:315059226
CP002185

Hit length
4,900,968 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP002185

0% cov

Alignment Length
35 bp
Escherichia coli BL21(DE3)
Escherichia coli BL21(DE3)
Public DB hit
GI:313848522
AM946981
1 of 2 hits reported for Escherichia coli BL21(DE3).

Hit length
4,558,947 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AM946981

0% cov

Alignment Length
35 bp
Escherichia coli O83:H1 str. NRG 857C
Escherichia coli O83:H1 str. NRG 857C
Public DB hit
GI:312944605
CP001855

Hit length
4,747,819 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001855

0% cov

Alignment Length
35 bp
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
FN649414

0% cov

Alignment Length
35 bp
Escherichia coli UM146
Escherichia coli UM146
Public DB hit
GI:307625127
CP002167

Hit length
4,993,013 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP002167

0% cov

Alignment Length
35 bp
Escherichia coli ABU 83972
Escherichia coli ABU 83972
Public DB hit
GI:307551844
CP001671

Hit length
5,131,397 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001671

0% cov

Alignment Length
35 bp
Enterobacter cloacae subsp. cloacae NCTC 9394
Enterobacter cloacae subsp. cloacae NCTC 9394
Public DB hit
GI:295095013
FP929040

Hit length
4,908,759 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
FP929040

0% cov

Alignment Length
35 bp
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ATCC 13047
Public DB hit
GI:295054830
CP001918

Hit length
5,314,581 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001918

0% cov

Alignment Length
35 bp
Escherichia coli IHE3034
Escherichia coli IHE3034
Public DB hit
GI:294489418
CP001969

Hit length
5,108,383 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001969

0% cov

Alignment Length
35 bp
Escherichia coli O55:H7 str. CB9615
Escherichia coli O55:H7 str. CB9615
Public DB hit
GI:290760697
CP001846

Hit length
5,386,352 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001846

0% cov

Alignment Length
35 bp
Escherichia coli 042
Escherichia coli 042
Public DB hit
GI:284919779
FN554766

Hit length
5,241,977 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
FN554766

0% cov

Alignment Length
35 bp
Escherichia coli SE15
Escherichia coli SE15
Public DB hit
GI:281177210
AP009378

Hit length
4,717,338 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AP009378

0% cov

Alignment Length
35 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AP010960

0% cov

Alignment Length
35 bp
Escherichia coli O103:H2 str. 12009
Escherichia coli O103:H2 str. 12009
Public DB hit
GI:257757386
AP010958

Hit length
5,449,314 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AP010958

0% cov

Alignment Length
35 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
AP010953

0% cov

Alignment Length
35 bp
synthetic construct
synthetic construct
Public DB hit
GI:222142699
FJ015154

Hit length
2,853 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
FJ015154

1.23% cov

Alignment Length
35 bp
Escherichia coli O157:H7 str. TW14359
Escherichia coli O157:H7 str. TW14359
Public DB hit
GI:254590536
CP001368

Hit length
5,528,136 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP001368

0% cov

Alignment Length
35 bp
Escherichia coli B str. REL606
Escherichia coli B str. REL606
Public DB hit
GI:253972022
CP000819

Hit length
4,629,812 bp

E Value
1.63E-8

BLAST Score
65.8 bits

Similarity

100%

Coverage

64.81%

Alignment (schematic)

SEQ ID NO 7

64.81% cov
CP000819

0% cov

Alignment Length
35 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Escherichia coli DH1
Escherichia coli DH1
Public DB hit
GI:315134697
AP012030
1 of 2 hits reported for Escherichia coli DH1.

Hit length
4,621,430 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AP012030

0% cov

Alignment Length
50 bp

CIGAR string
8H4MI3MD41M mismatches: 0 - insertions: 1 - deletions: 1
Escherichia coli ETEC H10407
Escherichia coli ETEC H10407
Public DB hit
GI:309700213
FN649414

Hit length
5,153,435 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
FN649414

0% cov

Alignment Length
50 bp

CIGAR string
8H4MI3MD41M mismatches: 0 - insertions: 1 - deletions: 1
Escherichia coli BW2952
Escherichia coli BW2952
Public DB hit
GI:238859724
CP001396

Hit length
4,578,159 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
CP001396

0% cov

Alignment Length
50 bp
Escherichia coli K-12
Escherichia coli K-12
Public DB hit
GI:126038352
EF136884

Hit length
7,477 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
EF136884

0.66% cov

Alignment Length
50 bp
Escherichia coli IAI1
Escherichia coli IAI1
Public DB hit
GI:218359353
CU928160

Hit length
4,700,560 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
CU928160

0% cov

Alignment Length
50 bp
Escherichia coli SE11
Escherichia coli SE11
Public DB hit
GI:209910450
AP009240

Hit length
4,887,515 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AP009240

0% cov

Alignment Length
50 bp
Escherichia coli str. K-12 substr. DH10B
Escherichia coli str. K-12 substr. DH10B
Public DB hit
GI:169887498
CP000948

Hit length
4,686,137 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
CP000948

0% cov

Alignment Length
50 bp
Escherichia coli ATCC 8739
Escherichia coli ATCC 8739
Public DB hit
GI:169752989
CP000946

Hit length
4,746,218 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
CP000946

0% cov

Alignment Length
50 bp
Escherichia coli str. K-12 substr. W3110
Escherichia coli str. K-12 substr. W3110
Public DB hit
GI:85674274
AP009048

Hit length
4,646,332 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AP009048

0% cov

Alignment Length
50 bp
Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
Public DB hit
GI:48994873
U00096
1 of 2 hits reported for Escherichia coli str. K-12 substr. MG1655.

Hit length
4,639,675 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
U00096

0% cov

Alignment Length
50 bp
Cloning vector pCE70
Cloning vector pCE70
Public DB hit
GI:70610263
DQ096479

Hit length
6,920 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
DQ096479

0.71% cov

Alignment Length
50 bp
Cloning vector pCE40
Cloning vector pCE40
Public DB hit
GI:17473498
AY061944

Hit length
6,274 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AY061944

0.78% cov

Alignment Length
50 bp
Cloning vector pCE37
Cloning vector pCE37
Public DB hit
GI:17473494
AY061943

Hit length
6,290 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AY061943

0.78% cov

Alignment Length
50 bp
Cloning vector pCE36
Cloning vector pCE36
Public DB hit
GI:17473490
AY061942

Hit length
6,290 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AY061942

0.78% cov

Alignment Length
50 bp
Cloning vector pCE26
Cloning vector pCE26
Public DB hit
GI:17473486
AY061941

Hit length
6,256 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
AY061941

0.78% cov

Alignment Length
50 bp
synthetic construct
synthetic construct
Public DB hit
GI:2055395
U90436

Hit length
12,366 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
U90436

0.4% cov

Alignment Length
50 bp
Escherichia coli
Escherichia coli
Public DB hit
GI:146575
J01636
1 of 2 hits reported for Escherichia coli.

Hit length
7,477 bp

E Value
6.51E-13

BLAST Score
80.5 bits

Similarity

96%

Coverage

85.96%

Alignment (schematic)

SEQ ID NO 8

85.96% cov
J01636

0.66% cov

Alignment Length
50 bp
Escherichia coli UM146
Escherichia coli UM146
Public DB hit
GI:307625127
CP002167

Hit length
4,993,013 bp

E Value
3.03E-11

BLAST Score
75 bits

Similarity

95.74%

Coverage

80.7%

Alignment (schematic)

SEQ ID NO 8

80.7% cov
CP002167

0% cov

Alignment Length
47 bp
Escherichia coli IHE3034
Escherichia coli IHE3034
Public DB hit
GI:294489418
CP001969

Hit length
5,108,383 bp

E Value
3.03E-11

BLAST Score
75 bits

Similarity

95.74%

Coverage

80.7%

Alignment (schematic)

SEQ ID NO 8

80.7% cov
CP001969

0% cov

Alignment Length
47 bp
Escherichia coli O111:H- str. 11128
Escherichia coli O111:H- str. 11128
Public DB hit
GI:257762509
AP010960

Hit length
5,371,077 bp

E Value
3.03E-11

BLAST Score
75 bits

Similarity

100%

Coverage

70.18%

Alignment (schematic)

SEQ ID NO 8

70.18% cov
AP010960

0% cov

Alignment Length
40 bp
Escherichia coli O26:H11 str. 11368
Escherichia coli O26:H11 str. 11368
Public DB hit
GI:257751862
AP010953

Hit length
5,697,240 bp

E Value
3.03E-11

BLAST Score
75 bits

Similarity

100%

Coverage

70.18%

Alignment (schematic)

SEQ ID NO 8

70.18% cov
AP010953

0% cov

Alignment Length
40 bp
Escherichia coli ED1a
Escherichia coli ED1a
Public DB hit
GI:218425442
CU928162

Hit length
5,209,548 bp

E Value
3.03E-11

BLAST Score
75 bits

Similarity

95.74%

Coverage

80.7%

Alignment (schematic)

SEQ ID NO 8

80.7% cov
CU928162

0% cov

Alignment Length
47 bp

Occurrence

6 times in PatSeqDB

in 6 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

synthetic construct
synthetic construct
Public DB hit
GI:326910732
JF275063
1 of 9 hits reported for synthetic construct.

Hit length
6,584 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
JF275063

0.29% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pSB3941
Expression vector pSB3941
Public DB hit
GI:309400215
HQ343235

Hit length
6,786 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
HQ343235

0.28% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Shuttle expression vector pBJ2
Shuttle expression vector pBJ2
Public DB hit
GI:308053085
HM441078

Hit length
8,005 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
HM441078

0.24% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Corynebacterium glutamicum/Escherichia coli shuttle expression vector pBJ1
Corynebacterium glutamicum/Escherichia coli shuttle expression vector pBJ1
Public DB hit
GI:294818267
GU944694

Hit length
7,028 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
GU944694

0.27% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Bacterial expression vector pBEN1-SGC
Bacterial expression vector pBEN1-SGC
Public DB hit
GI:292397645
GU725055

Hit length
7,515 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
GU725055

0.25% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Cloning vector pNIC-NHS
Cloning vector pNIC-NHS
Public DB hit
GI:290784433
FN677494

Hit length
7,299 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
FN677494

0.26% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pNIC-ZB
Expression vector pNIC-ZB
Public DB hit
GI:290563880
GU452710

Hit length
7,446 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
GU452710

0.26% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pNH-TrxT
Expression vector pNH-TrxT
Public DB hit
GI:283557979
GU269914

Hit length
7,602 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
GU269914

0.25% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector RHP-AmpS
Expression vector RHP-AmpS
Public DB hit
GI:254973015
FJ545754

Hit length
6,384 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
FJ545754

0.3% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Cloning vector pSB4234
Cloning vector pSB4234
Public DB hit
GI:186702981
EU421723

Hit length
6,828 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU421723

0.28% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector p0GWA
Expression vector p0GWA
Public DB hit
GI:187969538
EU680847

Hit length
7,105 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680847

0.27% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pXGWA
Expression vector pXGWA
Public DB hit
GI:187969533
EU680846

Hit length
7,435 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680846

0.26% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pNGWA
Expression vector pNGWA
Public DB hit
GI:187969528
EU680845

Hit length
8,593 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680845

0.22% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pMGWA
Expression vector pMGWA
Public DB hit
GI:187969523
EU680844

Hit length
8,209 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680844

0.23% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pHXGWA
Expression vector pHXGWA
Public DB hit
GI:187969518
EU680843

Hit length
7,462 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680843

0.25% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pHNGWA
Expression vector pHNGWA
Public DB hit
GI:187969513
EU680842

Hit length
8,620 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680842

0.22% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pHMGWA
Expression vector pHMGWA
Public DB hit
GI:187969508
EU680841

Hit length
8,236 bp

E Value
2.65E-1

BLAST Score
38.2 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 9

100% cov
EU680841

0.23% cov

Alignment Length
19 bp

CIGAR string
19M mismatches: 0 - insertions: 0 - deletions: 0

Occurrence

35 times in PatSeqDB

in 10 families
(1 referenced in claims)
in 35 documents

Tools

PatSeq Finder

SEQ ID NO

Length

Type

nucleotide

Locations

Undetermined

Declared organism:
Escherichia coli

Determined organism:

Cloning vector pYUBDuet
Cloning vector pYUBDuet
Public DB hit
GI:317457388
HQ247815

Hit length
5,087 bp

E Value
6.71E-2

BLAST Score
40.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
HQ247815

0.39% cov

Alignment Length
20 bp

CIGAR string
20M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pEBDuet28A
Expression vector pEBDuet28A
Public DB hit
GI:295848118
HM070249

Hit length
5,258 bp

E Value
6.71E-2

BLAST Score
40.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
HM070249

0.38% cov

Alignment Length
20 bp

CIGAR string
20M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pEBDuet23A
Expression vector pEBDuet23A
Public DB hit
GI:295848116
HM070248

Hit length
5,207 bp

E Value
6.71E-2

BLAST Score
40.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
HM070248

0.38% cov

Alignment Length
20 bp

CIGAR string
20M mismatches: 0 - insertions: 0 - deletions: 0
Expression vector pJJDuet30
Expression vector pJJDuet30
Public DB hit
GI:64174788
DQ016035

Hit length
4,366 bp

E Value
6.71E-2

BLAST Score
40.1 bits

Similarity

100%

Coverage

100%

Alignment (schematic)

SEQ ID NO 10

100% cov
DQ016035

0.46% cov

Alignment Length
20 bp

Occurrence

47 times in PatSeqDB

in 17 families
(1 referenced in claims)
in 47 documents

Tools

PatSeq Finder

Search for Biological Sequences disclosed in Patents

12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

Escherichia coli UMNK88

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Escherichia coli DH1

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Escherichia coli BL21(DE3)

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

CIGAR string

Escherichia coli ETEC H10407

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Escherichia coli O111:H- str. 11128

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Escherichia coli O103:H2 str. 12009

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Escherichia coli O26:H11 str. 11368

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Escherichia coli B str. REL606

Public DB hit

Hit length

E Value

BLAST Score

Similarity

Coverage

Alignment (schematic)

Alignment Length

Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Public DB hit