Generation Of Plants With Improved Drought Tolerance

  • Published: Aug 31, 2010
  • Earliest Priority: Jun 24 2003
  • Family: 5
  • Cited Works: 76
  • Cited by: 0
  • Cites: 11
  • Sequences: 18
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext
18 sequences found in this patent (in total)

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Download sequences in fasta format: 16 peptides 2 nucleotides

Displaying 1 - 10 of 18 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
381
Sequence Type
nucleotide
Locations
Claims, Detailed Description
Declared organism
Arabidopsis thaliana
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18410812
      NM_106181
      1 of 7 hits reported for Arabidopsis thaliana.
    • Hit length
      381 bp
    • E Value
      0E0
    • BLAST Score
      704.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_106181
      100% cov
    • Alignment Length
      381 bp
    • CIGAR string
      381M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297842270
      XM_002888971
    • Hit length
      468 bp
    • E Value
      2.51E-116
    • BLAST Score
      427.7 bits
    • Similarity
      95.19%
    • Coverage
      70.87%
    • Alignment (schematic)

      SEQ ID NO 1
      70.87% cov
      XM_002888971
      57.69% cov
    • Alignment Length
      270 bp
  • Brassica rapa subsp. pekinensis

    Brassica rapa subsp. pekinensis

    • Public DB hit
      GI:199580187
      AC189493
    • Hit length
      133,144 bp
    • E Value
      5.59E-93
    • BLAST Score
      350.1 bits
    • Similarity
      88.93%
    • Coverage
      75.59%
    • Alignment (schematic)

      SEQ ID NO 1
      75.59% cov
      AC189493
      0.21% cov
    • Alignment Length
      289 bp
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
2
Length
126
Sequence Type
peptide
Locations
Claims, Detailed Description, Summary
Declared organism
Arabidopsis thaliana
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15222161
      NP_177661
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      126 aa
    • E Value
      3.88E-68
    • BLAST Score
      261.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_177661
      100% cov
    • Alignment Length
      126 aa
    • CIGAR string
      126M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297842271
      XP_002889017
    • Hit length
      95 aa
    • E Value
      6.85E-40
    • BLAST Score
      167.5 bits
    • Similarity
      97.78%
    • Coverage
      71.43%
    • Alignment (schematic)

      SEQ ID NO 2
      71.43% cov
      XP_002889017
      94.74% cov
    • Alignment Length
      90 aa
    • CIGAR string
      10MN3MN67M2N6M36H mismatches: 4 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225428460
      XP_002284148
    • Hit length
      96 aa
    • E Value
      1.36E-28
    • BLAST Score
      130.2 bits
    • Similarity
      78.26%
    • Coverage
      73.02%
    • Alignment (schematic)

      SEQ ID NO 2
      73.02% cov
      XP_002284148
      93.75% cov
    • Alignment Length
      92 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224062123
      XP_002300766
      1 of 2 hits reported for Populus trichocarpa.
    • Hit length
      99 aa
    • E Value
      3.47E-27
    • BLAST Score
      125.6 bits
    • Similarity
      80.49%
    • Coverage
      65.08%
    • Alignment (schematic)

      SEQ ID NO 2
      65.08% cov
      XP_002300766
      82.83% cov
    • Alignment Length
      82 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255538654
      XP_002510392
    • Hit length
      95 aa
    • E Value
      2.25E-25
    • BLAST Score
      119.4 bits
    • Similarity
      77.78%
    • Coverage
      64.29%
    • Alignment (schematic)

      SEQ ID NO 2
      64.29% cov
      XP_002510392
      85.26% cov
    • Alignment Length
      81 aa
Occurrence
47 times in PatSeqDB
Tools
SEQ ID NO
3
Length
98
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Brassica rapa
Determined organism
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:30686409
      NP_564087
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      100 aa
    • E Value
      2.28E-38
    • BLAST Score
      162.5 bits
    • Similarity
      96.51%
    • Coverage
      87.76%
    • Alignment (schematic)

      SEQ ID NO 3
      87.76% cov
      NP_564087
      86% cov
    • Alignment Length
      86 aa
    • CIGAR string
      12H4MN24MN36MN5M4N6M3NM mismatches: 10 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297842271
      XP_002889017
    • Hit length
      95 aa
    • E Value
      7.12E-28
    • BLAST Score
      127.9 bits
    • Similarity
      80.23%
    • Coverage
      87.76%
    • Alignment (schematic)

      SEQ ID NO 3
      87.76% cov
      XP_002889017
      88.42% cov
    • Alignment Length
      86 aa
    • CIGAR string
      9H2M2N3MN16MN7MNM2N14MN3M3N4MN3M2N2D2N3MNM4NMN3MN3H mismatches: 23 - insertions: 0 - deletions: 2
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225430734
      XP_002266235
      1 of 3 hits reported for Vitis vinifera.
    • Hit length
      79 aa
    • E Value
      7.18E-24
    • BLAST Score
      114.4 bits
    • Similarity
      81.01%
    • Coverage
      74.49%
    • Alignment (schematic)

      SEQ ID NO 3
      74.49% cov
      XP_002266235
      100% cov
    • Alignment Length
      79 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536853
      XP_002509493
      1 of 2 hits reported for Ricinus communis.
    • Hit length
      80 aa
    • E Value
      1.83E-23
    • BLAST Score
      113.2 bits
    • Similarity
      86.3%
    • Coverage
      74.49%
    • Alignment (schematic)

      SEQ ID NO 3
      74.49% cov
      XP_002509493
      91.25% cov
    • Alignment Length
      73 aa
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
4
Length
75
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Vitis vinifera
Determined organism
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225428458
      XP_002284141
      1 of 5 hits reported for Vitis vinifera.
    • Hit length
      75 aa
    • E Value
      6.3E-37
    • BLAST Score
      157.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002284141
      100% cov
    • Alignment Length
      75 aa
    • CIGAR string
      75M mismatches: 0 - insertions: 0 - deletions: 0
  • Vitis pseudoreticulata

    Vitis pseudoreticulata

    • Public DB hit
      GI:326417171
      ADZ73427
    • Hit length
      75 aa
    • E Value
      2.93E-36
    • BLAST Score
      155.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADZ73427
      100% cov
    • Alignment Length
      75 aa
    • CIGAR string
      62MN12M mismatches: 1 - insertions: 0 - deletions: 0
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224133822
      XP_002327689
      1 of 5 hits reported for Populus trichocarpa.
    • Hit length
      85 aa
    • E Value
      4.6E-28
    • BLAST Score
      128.6 bits
    • Similarity
      86.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002327689
      92.94% cov
    • Alignment Length
      79 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536853
      XP_002509493
    • Hit length
      80 aa
    • E Value
      3.06E-27
    • BLAST Score
      125.6 bits
    • Similarity
      90.28%
    • Coverage
      96%
    • Alignment (schematic)

      SEQ ID NO 4
      96% cov
      XP_002509493
      90% cov
    • Alignment Length
      72 aa
  • Glycine max

    Glycine max

    • Public DB hit
      GI:110931736
      ABH02867
    • Hit length
      97 aa
    • E Value
      4.56E-27
    • BLAST Score
      125.2 bits
    • Similarity
      89.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ABH02867
      77.32% cov
    • Alignment Length
      75 aa
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15222161
      NP_177661
    • Hit length
      126 aa
    • E Value
      2.23E-24
    • BLAST Score
      116.3 bits
    • Similarity
      82.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_177661
      59.52% cov
    • Alignment Length
      75 aa
Occurrence
41 times in PatSeqDB
Tools
SEQ ID NO
5
Length
97
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Glycine max
Determined organism
  • Glycine max

    Glycine max

    • Public DB hit
      GI:110931736
      ABH02867
    • Hit length
      97 aa
    • E Value
      1.23E-49
    • BLAST Score
      200.3 bits
    • Similarity
      97.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ABH02867
      100% cov
    • Alignment Length
      97 aa
    • CIGAR string
      MN91MN3M mismatches: 2 - insertions: 0 - deletions: 0
  • Medicago truncatula

    Medicago truncatula

    • Public DB hit
      GI:124360540
      ABN08550
    • Hit length
      92 aa
    • E Value
      8.09E-32
    • BLAST Score
      141 bits
    • Similarity
      91.46%
    • Coverage
      84.54%
    • Alignment (schematic)

      SEQ ID NO 5
      84.54% cov
      ABN08550
      85.87% cov
    • Alignment Length
      82 aa
    • CIGAR string
      13H2MN5MN29MN6MNMN6MN8MN3DM3N4MN2M2NMN2H mismatches: 14 - insertions: 0 - deletions: 3
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224077838
      XP_002305430
      1 of 2 hits reported for Populus trichocarpa.
    • Hit length
      99 aa
    • E Value
      2.24E-28
    • BLAST Score
      129.4 bits
    • Similarity
      83.53%
    • Coverage
      85.57%
    • Alignment (schematic)

      SEQ ID NO 5
      85.57% cov
      XP_002305430
      85.86% cov
    • Alignment Length
      85 aa
    • CIGAR string
      11HM4N5MN6MN6MN3MN6MN8MN2MN15M2NM2N2INM3N3M3NM2NM3H mismatches: 24 - insertions: 2 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225428460
      XP_002284148
      1 of 5 hits reported for Vitis vinifera.
    • Hit length
      96 aa
    • E Value
      3.54E-28
    • BLAST Score
      128.6 bits
    • Similarity
      76.84%
    • Coverage
      96.91%
    • Alignment (schematic)

      SEQ ID NO 5
      96.91% cov
      XP_002284148
      98.96% cov
    • Alignment Length
      95 aa
  • Antirrhinum majus

    Antirrhinum majus

    • Public DB hit
      GI:118137433
      2CJJ_A
    • Hit length
      93 aa
    • E Value
      3.95E-28
    • BLAST Score
      128.6 bits
    • Similarity
      80.43%
    • Coverage
      93.81%
    • Alignment (schematic)

      SEQ ID NO 5
      93.81% cov
      2CJJ_A
      97.85% cov
    • Alignment Length
      92 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297821363
      XP_002878564
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      96 aa
    • E Value
      1.05E-27
    • BLAST Score
      127.1 bits
    • Similarity
      80.22%
    • Coverage
      89.69%
    • Alignment (schematic)

      SEQ ID NO 5
      89.69% cov
      XP_002878564
      94.79% cov
    • Alignment Length
      91 aa
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15226604
      NP_179759
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      101 aa
    • E Value
      2.44E-26
    • BLAST Score
      122.9 bits
    • Similarity
      80.46%
    • Coverage
      85.57%
    • Alignment (schematic)

      SEQ ID NO 5
      85.57% cov
      NP_179759
      86.14% cov
    • Alignment Length
      87 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536847
      XP_002509490
    • Hit length
      107 aa
    • E Value
      4.48E-26
    • BLAST Score
      121.7 bits
    • Similarity
      84.42%
    • Coverage
      79.38%
    • Alignment (schematic)

      SEQ ID NO 5
      79.38% cov
      XP_002509490
      71.96% cov
    • Alignment Length
      77 aa
Occurrence
16 times in PatSeqDB
Tools
SEQ ID NO
6
Length
88
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Solanum tuberosum
Determined organism
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224080355
      XP_002306110
      1 of 5 hits reported for Populus trichocarpa.
    • Hit length
      92 aa
    • E Value
      6.12E-27
    • BLAST Score
      124.8 bits
    • Similarity
      94.03%
    • Coverage
      76.14%
    • Alignment (schematic)

      SEQ ID NO 6
      76.14% cov
      XP_002306110
      72.83% cov
    • Alignment Length
      67 aa
    • CIGAR string
      7H6M2N5MN3MN11MNMN4MN3MNMN12MN7MNMNM14H mismatches: 12 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225430734
      XP_002266235
      1 of 4 hits reported for Vitis vinifera.
    • Hit length
      79 aa
    • E Value
      1.25E-26
    • BLAST Score
      123.6 bits
    • Similarity
      87.84%
    • Coverage
      84.09%
    • Alignment (schematic)

      SEQ ID NO 6
      84.09% cov
      XP_002266235
      92.41% cov
    • Alignment Length
      74 aa
    • CIGAR string
      MN2M4N5MN6MN3M2N10MNMN2MD5MN12MNMN4MN2MNMNM14H mismatches: 17 - insertions: 0 - deletions: 1
  • Vitis pseudoreticulata

    Vitis pseudoreticulata

    • Public DB hit
      GI:326417171
      ADZ73427
    • Hit length
      75 aa
    • E Value
      1.03E-25
    • BLAST Score
      120.6 bits
    • Similarity
      90.67%
    • Coverage
      84.09%
    • Alignment (schematic)

      SEQ ID NO 6
      84.09% cov
      ADZ73427
      98.67% cov
    • Alignment Length
      75 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536853
      XP_002509493
    • Hit length
      80 aa
    • E Value
      1.2E-24
    • BLAST Score
      117.1 bits
    • Similarity
      92.54%
    • Coverage
      76.14%
    • Alignment (schematic)

      SEQ ID NO 6
      76.14% cov
      XP_002509493
      82.5% cov
    • Alignment Length
      67 aa
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242053749
      XP_002456020
    • Hit length
      98 aa
    • E Value
      4.46E-23
    • BLAST Score
      111.7 bits
    • Similarity
      85.53%
    • Coverage
      84.09%
    • Alignment (schematic)

      SEQ ID NO 6
      84.09% cov
      XP_002456020
      77.55% cov
    • Alignment Length
      76 aa
  • Zea mays

    Zea mays

    • Public DB hit
      GI:226531820
      NP_001147409
    • Hit length
      96 aa
    • E Value
      5.27E-23
    • BLAST Score
      111.7 bits
    • Similarity
      81.58%
    • Coverage
      86.36%
    • Alignment (schematic)

      SEQ ID NO 6
      86.36% cov
      NP_001147409
      79.17% cov
    • Alignment Length
      76 aa
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15222161
      NP_177661
    • Hit length
      126 aa
    • E Value
      1.3E-22
    • BLAST Score
      110.2 bits
    • Similarity
      82.67%
    • Coverage
      84.09%
    • Alignment (schematic)

      SEQ ID NO 6
      84.09% cov
      NP_177661
      58.73% cov
    • Alignment Length
      75 aa
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
7
Length
71
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Populus tremula
Determined organism
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224080355
      XP_002306110
      1 of 5 hits reported for Populus trichocarpa.
    • Hit length
      92 aa
    • E Value
      5.85E-32
    • BLAST Score
      141.4 bits
    • Similarity
      100%
    • Coverage
      97.18%
    • Alignment (schematic)

      SEQ ID NO 7
      97.18% cov
      XP_002306110
      75% cov
    • Alignment Length
      69 aa
    • CIGAR string
      38MNMN12MN15M2H mismatches: 3 - insertions: 0 - deletions: 0
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536853
      XP_002509493
      1 of 2 hits reported for Ricinus communis.
    • Hit length
      80 aa
    • E Value
      6.06E-26
    • BLAST Score
      121.3 bits
    • Similarity
      95.65%
    • Coverage
      97.18%
    • Alignment (schematic)

      SEQ ID NO 7
      97.18% cov
      XP_002509493
      85% cov
    • Alignment Length
      69 aa
    • CIGAR string
      4MNM2N21MN2MN5MNMN6MD3MN6M2N4MN4M2H mismatches: 11 - insertions: 0 - deletions: 1
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225430734
      XP_002266235
      1 of 5 hits reported for Vitis vinifera.
    • Hit length
      79 aa
    • E Value
      1.18E-22
    • BLAST Score
      110.5 bits
    • Similarity
      89.71%
    • Coverage
      95.77%
    • Alignment (schematic)

      SEQ ID NO 7
      95.77% cov
      XP_002266235
      84.81% cov
    • Alignment Length
      68 aa
  • Vitis pseudoreticulata

    Vitis pseudoreticulata

    • Public DB hit
      GI:326417171
      ADZ73427
    • Hit length
      75 aa
    • E Value
      2.35E-20
    • BLAST Score
      102.8 bits
    • Similarity
      88.89%
    • Coverage
      88.73%
    • Alignment (schematic)

      SEQ ID NO 7
      88.73% cov
      ADZ73427
      82.67% cov
    • Alignment Length
      63 aa
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:77556427
      ABA99223
    • Hit length
      109 aa
    • E Value
      7.24E-19
    • BLAST Score
      97.8 bits
    • Similarity
      88.33%
    • Coverage
      84.51%
    • Alignment (schematic)

      SEQ ID NO 7
      84.51% cov
      ABA99223
      55.05% cov
    • Alignment Length
      60 aa
Occurrence
16 times in PatSeqDB
Tools
SEQ ID NO
8
Length
88
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Solanum lycopersicum
Determined organism
  • Solanum lycopersicum

    Solanum lycopersicum

    • Public DB hit
      GI:7981380
      CAB91874
    • Hit length
      88 aa
    • E Value
      4.22E-45
    • BLAST Score
      184.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CAB91874
      100% cov
    • Alignment Length
      88 aa
    • CIGAR string
      88M mismatches: 0 - insertions: 0 - deletions: 0
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224133822
      XP_002327689
      1 of 3 hits reported for Populus trichocarpa.
    • Hit length
      85 aa
    • E Value
      6.33E-25
    • BLAST Score
      117.9 bits
    • Similarity
      82.93%
    • Coverage
      93.18%
    • Alignment (schematic)

      SEQ ID NO 8
      93.18% cov
      XP_002327689
      96.47% cov
    • Alignment Length
      82 aa
    • CIGAR string
      1HNM2NM4NMN3MN4MN6MN3MNMN3MN9MN4MN6M2N2M2NM2NMN4MNM3NMNMN5H mismatches: 29 - insertions: 0 - deletions: 0
  • Antirrhinum majus

    Antirrhinum majus

    • Public DB hit
      GI:118137433
      2CJJ_A
    • Hit length
      93 aa
    • E Value
      1.04E-24
    • BLAST Score
      117.5 bits
    • Similarity
      84.81%
    • Coverage
      89.77%
    • Alignment (schematic)

      SEQ ID NO 8
      89.77% cov
      2CJJ_A
      84.95% cov
    • Alignment Length
      79 aa
    • CIGAR string
      3HMNM2N2M3NMN2MN5MN7MNMN3MN3MN2MNMNMN4MN5M2NM3NM2NMN4MNMN4MN6H mismatches: 28 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:147767321
      CAN68999
      1 of 5 hits reported for Vitis vinifera.
    • Hit length
      96 aa
    • E Value
      2.55E-24
    • BLAST Score
      115.9 bits
    • Similarity
      83.33%
    • Coverage
      81.82%
    • Alignment (schematic)

      SEQ ID NO 8
      81.82% cov
      CAN68999
      75% cov
    • Alignment Length
      72 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255536847
      XP_002509490
    • Hit length
      107 aa
    • E Value
      5.83E-24
    • BLAST Score
      114.8 bits
    • Similarity
      82.14%
    • Coverage
      95.45%
    • Alignment (schematic)

      SEQ ID NO 8
      95.45% cov
      XP_002509490
      78.5% cov
    • Alignment Length
      84 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297821363
      XP_002878564
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      96 aa
    • E Value
      8.13E-24
    • BLAST Score
      114.4 bits
    • Similarity
      83.78%
    • Coverage
      84.09%
    • Alignment (schematic)

      SEQ ID NO 8
      84.09% cov
      XP_002878564
      77.08% cov
    • Alignment Length
      74 aa
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145356202
      NP_195636
      1 of 3 hits reported for Arabidopsis thaliana.
    • Hit length
      100 aa
    • E Value
      1.34E-23
    • BLAST Score
      113.6 bits
    • Similarity
      84.51%
    • Coverage
      80.68%
    • Alignment (schematic)

      SEQ ID NO 8
      80.68% cov
      NP_195636
      71% cov
    • Alignment Length
      71 aa
Occurrence
64 times in PatSeqDB
Tools
SEQ ID NO
9
Length
126
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Oryza sativa
Determined organism
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:5091605
      AAD39594
      1 of 3 hits reported for Oryza sativa Japonica Group.
    • Hit length
      126 aa
    • E Value
      5.79E-69
    • BLAST Score
      264.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAD39594
      100% cov
    • Alignment Length
      126 aa
    • CIGAR string
      126M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:125553458
      EAY99167
      1 of 2 hits reported for Oryza sativa Indica Group.
    • Hit length
      111 aa
    • E Value
      1.04E-54
    • BLAST Score
      216.9 bits
    • Similarity
      100%
    • Coverage
      82.54%
    • Alignment (schematic)

      SEQ ID NO 9
      82.54% cov
      EAY99167
      93.69% cov
    • Alignment Length
      104 aa
    • CIGAR string
      77MN26M22H mismatches: 1 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242053749
      XP_002456020
    • Hit length
      98 aa
    • E Value
      6.49E-22
    • BLAST Score
      107.8 bits
    • Similarity
      78.48%
    • Coverage
      62.7%
    • Alignment (schematic)

      SEQ ID NO 9
      62.7% cov
      XP_002456020
      76.53% cov
    • Alignment Length
      79 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224133822
      XP_002327689
    • Hit length
      85 aa
    • E Value
      1.25E-20
    • BLAST Score
      103.6 bits
    • Similarity
      75.29%
    • Coverage
      67.46%
    • Alignment (schematic)

      SEQ ID NO 9
      67.46% cov
      XP_002327689
      97.65% cov
    • Alignment Length
      85 aa
Occurrence
34 times in PatSeqDB
Tools
SEQ ID NO
10
Length
236
Sequence Type
peptide
Locations
Detailed Description
Declared organism
Oryza sativa
Determined organism
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:5091604
      AAD39593
    • Hit length
      236 aa
    • E Value
      7.54E-137
    • BLAST Score
      491.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAD39593
      100% cov
    • Alignment Length
      236 aa
    • CIGAR string
      236M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
20 times in PatSeqDB
Tools

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