Mycobacterium Mutants For Vaccines With Improved Protective Efficacy

Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat WIPO-PCT
22 sequences found in this patent (in total)

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Displaying 1 - 10 of 22 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
900
Sequence Type
DNA
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP010918
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      900M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM408590
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      900M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31619894
      BX248345
    • Hit length
      308,050 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BX248345
      0.29% cov
    • Alignment Length
      900 bp
    • CIGAR string
      900M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001662
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001658
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000717
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000611
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE000516
      0.02% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:38490319
      BX842582
    • Hit length
      349,563 bp
    • E Value
      0E0
    • BLAST Score
      1,657.6 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BX842582
      0.26% cov
    • Alignment Length
      900 bp
    • CIGAR string
      510MN389M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
2
Length
299
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
Occurrence
11 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,671
Sequence Type
DNA
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001662
      0.04% cov
    • Alignment Length
      1,671 bp
    • CIGAR string
      1671M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP001658
      0.04% cov
    • Alignment Length
      1,671 bp
    • CIGAR string
      1671M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AP010918
      0.04% cov
    • Alignment Length
      1,671 bp
    • CIGAR string
      1671M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000717
      0.04% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CP000611
      0.04% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AM408590
      0.04% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE000516
      0.04% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:38684030
      BX842577
    • Hit length
      347,496 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BX842577
      0.48% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31618223
      BX248339
    • Hit length
      300,050 bp
    • E Value
      0E0
    • BLAST Score
      3,086.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BX248339
      0.56% cov
    • Alignment Length
      1,671 bp
  • Mycobacterium avium 104

    Mycobacterium avium 104

    • Public DB hit
      GI:118163506
      CP000479
    • Hit length
      5,475,491 bp
    • E Value
      1.39E-179
    • BLAST Score
      640.1 bits
    • Similarity
      75.42%
    • Coverage
      88.93%
    • Alignment (schematic)

      SEQ ID NO 3
      88.93% cov
      CP000479
      0.03% cov
    • Alignment Length
      1,546 bp
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41400296
      AE016958
    • Hit length
      4,829,781 bp
    • E Value
      6.46E-178
    • BLAST Score
      634.5 bits
    • Similarity
      75.36%
    • Coverage
      88.93%
    • Alignment (schematic)

      SEQ ID NO 3
      88.93% cov
      AE016958
      0.03% cov
    • Alignment Length
      1,546 bp
Occurrence
21 times in PatSeqDB
Tools
SEQ ID NO
4
Length
556
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15608773
      NP_216151
      1 of 2 hits reported for Mycobacterium tuberculosis H37Rv.
    • Hit length
      556 aa
    • E Value
      0E0
    • BLAST Score
      1,106.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_216151
      100% cov
    • Alignment Length
      556 aa
    • CIGAR string
      556M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15841090
      NP_336127
      1 of 2 hits reported for Mycobacterium tuberculosis CDC1551.
    • Hit length
      565 aa
    • E Value
      0E0
    • BLAST Score
      1,106.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_336127
      98.41% cov
    • Alignment Length
      556 aa
    • CIGAR string
      556M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis T17

    Mycobacterium tuberculosis T17

    • Public DB hit
      GI:219557554
      ZP_03536630
      1 of 2 hits reported for Mycobacterium tuberculosis T17.
    • Hit length
      565 aa
    • E Value
      0E0
    • BLAST Score
      1,105.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ZP_03536630
      98.41% cov
    • Alignment Length
      556 aa
  • Mycobacterium tuberculosis T92

    Mycobacterium tuberculosis T92

    • Public DB hit
      GI:215426953
      ZP_03424872
    • Hit length
      474 aa
    • E Value
      0E0
    • BLAST Score
      847 bits
    • Similarity
      100%
    • Coverage
      78.06%
    • Alignment (schematic)

      SEQ ID NO 4
      78.06% cov
      ZP_03424872
      91.56% cov
    • Alignment Length
      434 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183982453
      YP_001850744
    • Hit length
      571 aa
    • E Value
      0E0
    • BLAST Score
      846.3 bits
    • Similarity
      83.51%
    • Coverage
      99.64%
    • Alignment (schematic)

      SEQ ID NO 4
      99.64% cov
      YP_001850744
      97.72% cov
    • Alignment Length
      558 aa
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118617258
      YP_905590
    • Hit length
      522 aa
    • E Value
      0E0
    • BLAST Score
      825.1 bits
    • Similarity
      85.63%
    • Coverage
      93.88%
    • Alignment (schematic)

      SEQ ID NO 4
      93.88% cov
      YP_905590
      100% cov
    • Alignment Length
      522 aa
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168016
      ZP_04746675
    • Hit length
      527 aa
    • E Value
      0E0
    • BLAST Score
      812 bits
    • Similarity
      86.96%
    • Coverage
      94.6%
    • Alignment (schematic)

      SEQ ID NO 4
      94.6% cov
      ZP_04746675
      100% cov
    • Alignment Length
      529 aa
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15827724
      NP_301987
    • Hit length
      527 aa
    • E Value
      0E0
    • BLAST Score
      723.8 bits
    • Similarity
      81.25%
    • Coverage
      94.6%
    • Alignment (schematic)

      SEQ ID NO 4
      94.6% cov
      NP_301987
      100% cov
    • Alignment Length
      528 aa
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41407436
      NP_960272
    • Hit length
      616 aa
    • E Value
      0E0
    • BLAST Score
      703.4 bits
    • Similarity
      79.44%
    • Coverage
      96.22%
    • Alignment (schematic)

      SEQ ID NO 4
      96.22% cov
      NP_960272
      87.66% cov
    • Alignment Length
      540 aa
  • Mycobacterium avium subsp. paratuberculosis S397

    Mycobacterium avium subsp. paratuberculosis S397

    • Public DB hit
      GI:336457789
      EGO36783
    • Hit length
      525 aa
    • E Value
      0E0
    • BLAST Score
      689.9 bits
    • Similarity
      79.73%
    • Coverage
      93.17%
    • Alignment (schematic)

      SEQ ID NO 4
      93.17% cov
      EGO36783
      99.62% cov
    • Alignment Length
      523 aa
  • Mycobacterium parascrofulaceum ATCC BAA-614

    Mycobacterium parascrofulaceum ATCC BAA-614

    • Public DB hit
      GI:296164514
      ZP_06847085
    • Hit length
      527 aa
    • E Value
      0E0
    • BLAST Score
      688.3 bits
    • Similarity
      80.46%
    • Coverage
      94.6%
    • Alignment (schematic)

      SEQ ID NO 4
      94.6% cov
      ZP_06847085
      100% cov
    • Alignment Length
      527 aa
  • Mycobacterium avium 104

    Mycobacterium avium 104

    • Public DB hit
      GI:118465416
      YP_882322
    • Hit length
      498 aa
    • E Value
      0E0
    • BLAST Score
      675.6 bits
    • Similarity
      81.53%
    • Coverage
      89.57%
    • Alignment (schematic)

      SEQ ID NO 4
      89.57% cov
      YP_882322
      100% cov
    • Alignment Length
      498 aa
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,284
Sequence Type
DNA
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001662
      0.03% cov
    • Alignment Length
      1,284 bp
    • CIGAR string
      1284M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP001658
      0.03% cov
    • Alignment Length
      1,284 bp
    • CIGAR string
      1284M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AP010918
      0.03% cov
    • Alignment Length
      1,284 bp
    • CIGAR string
      1284M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000717
      0.03% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP000611
      0.03% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AM408590
      0.03% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE000516
      0.03% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353667
      BX842579
    • Hit length
      348,247 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BX842579
      0.37% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31618753
      BX248341
    • Hit length
      306,050 bp
    • E Value
      0E0
    • BLAST Score
      2,372.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BX248341
      0.42% cov
    • Alignment Length
      1,284 bp
  • Mycobacterium avium 104

    Mycobacterium avium 104

    • Public DB hit
      GI:118163506
      CP000479
    • Hit length
      5,475,491 bp
    • E Value
      0E0
    • BLAST Score
      791.5 bits
    • Similarity
      79.48%
    • Coverage
      90.26%
    • Alignment (schematic)

      SEQ ID NO 5
      90.26% cov
      CP000479
      0.02% cov
    • Alignment Length
      1,184 bp
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41400296
      AE016958
    • Hit length
      4,829,781 bp
    • E Value
      0E0
    • BLAST Score
      785.9 bits
    • Similarity
      79.37%
    • Coverage
      90.26%
    • Alignment (schematic)

      SEQ ID NO 5
      90.26% cov
      AE016958
      0.02% cov
    • Alignment Length
      1,183 bp
Occurrence
18 times in PatSeqDB
Tools
SEQ ID NO
6
Length
427
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15609318
      NP_216697
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      824.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_216697
      100% cov
    • Alignment Length
      427 aa
    • CIGAR string
      427M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis 02_1987

    Mycobacterium tuberculosis 02_1987

    • Public DB hit
      GI:289745454
      ZP_06504832
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      823.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_06504832
      100% cov
    • Alignment Length
      427 aa
    • CIGAR string
      102MN324M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium africanum K85

    Mycobacterium africanum K85

    • Public DB hit
      GI:289574866
      ZP_06455093
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      822.8 bits
    • Similarity
      99.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_06455093
      100% cov
    • Alignment Length
      427 aa
    • CIGAR string
      68MN358M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis SUMu007

    Mycobacterium tuberculosis SUMu007

    • Public DB hit
      GI:308375799
      ZP_07445158
    • Hit length
      419 aa
    • E Value
      0E0
    • BLAST Score
      805.1 bits
    • Similarity
      100%
    • Coverage
      98.13%
    • Alignment (schematic)

      SEQ ID NO 6
      98.13% cov
      ZP_07445158
      100% cov
    • Alignment Length
      419 aa
  • Mycobacterium tuberculosis SUMu001

    Mycobacterium tuberculosis SUMu001

    • Public DB hit
      GI:308232057
      ZP_07414769
    • Hit length
      411 aa
    • E Value
      0E0
    • BLAST Score
      791.2 bits
    • Similarity
      100%
    • Coverage
      96.25%
    • Alignment (schematic)

      SEQ ID NO 6
      96.25% cov
      ZP_07414769
      100% cov
    • Alignment Length
      411 aa
  • Mycobacterium tuberculosis SUMu003

    Mycobacterium tuberculosis SUMu003

    • Public DB hit
      GI:308370934
      ZP_07423278
    • Hit length
      410 aa
    • E Value
      0E0
    • BLAST Score
      789.3 bits
    • Similarity
      100%
    • Coverage
      96.02%
    • Alignment (schematic)

      SEQ ID NO 6
      96.02% cov
      ZP_07423278
      100% cov
    • Alignment Length
      410 aa
  • Mycobacterium tuberculosis T17

    Mycobacterium tuberculosis T17

    • Public DB hit
      GI:289570296
      ZP_06450523
    • Hit length
      425 aa
    • E Value
      0E0
    • BLAST Score
      782.7 bits
    • Similarity
      97.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_06450523
      100% cov
    • Alignment Length
      427 aa
  • Mycobacterium tuberculosis RGTB423

    Mycobacterium tuberculosis RGTB423

    • Public DB hit
      GI:386005120
      YP_005923399
    • Hit length
      413 aa
    • E Value
      0E0
    • BLAST Score
      748.8 bits
    • Similarity
      100%
    • Coverage
      91.1%
    • Alignment (schematic)

      SEQ ID NO 6
      91.1% cov
      YP_005923399
      94.19% cov
    • Alignment Length
      389 aa
  • Mycobacterium leprae TN

    Mycobacterium leprae TN

    • Public DB hit
      GI:15827415
      NP_301678
    • Hit length
      428 aa
    • E Value
      0E0
    • BLAST Score
      660.6 bits
    • Similarity
      86.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_301678
      100% cov
    • Alignment Length
      428 aa
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168239
      ZP_04746898
    • Hit length
      428 aa
    • E Value
      0E0
    • BLAST Score
      657.5 bits
    • Similarity
      89.23%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ZP_04746898
      99.77% cov
    • Alignment Length
      427 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183983215
      YP_001851506
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      631.3 bits
    • Similarity
      87.32%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 6
      99.77% cov
      YP_001851506
      99.77% cov
    • Alignment Length
      426 aa
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118618824
      YP_907156
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      626.7 bits
    • Similarity
      86.85%
    • Coverage
      99.77%
    • Alignment (schematic)

      SEQ ID NO 6
      99.77% cov
      YP_907156
      99.77% cov
    • Alignment Length
      426 aa
  • Mycobacterium sp. MOTT36Y

    Mycobacterium sp. MOTT36Y

    • Public DB hit
      GI:387875543
      YP_006305847
    • Hit length
      409 aa
    • E Value
      0E0
    • BLAST Score
      598.6 bits
    • Similarity
      87.4%
    • Coverage
      91.1%
    • Alignment (schematic)

      SEQ ID NO 6
      91.1% cov
      YP_006305847
      94.87% cov
    • Alignment Length
      389 aa
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
7
Length
1,551
Sequence Type
DNA
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31618753
      BX248341
    • Hit length
      306,050 bp
    • E Value
      0E0
    • BLAST Score
      2,865.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      BX248341
      0.51% cov
    • Alignment Length
      1,551 bp
    • CIGAR string
      1551M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001662
      0.04% cov
    • Alignment Length
      1,551 bp
    • CIGAR string
      1350MN200M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP001658
      0.04% cov
    • Alignment Length
      1,551 bp
    • CIGAR string
      1350MN200M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AP010918
      0.04% cov
    • Alignment Length
      1,552 bp
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP000717
      0.04% cov
    • Alignment Length
      1,551 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP000611
      0.04% cov
    • Alignment Length
      1,551 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AM408590
      0.04% cov
    • Alignment Length
      1,552 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:41353667
      BX842579
    • Hit length
      348,247 bp
    • E Value
      0E0
    • BLAST Score
      2,859.7 bits
    • Similarity
      99.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      BX842579
      0.45% cov
    • Alignment Length
      1,551 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      0E0
    • BLAST Score
      2,854.2 bits
    • Similarity
      99.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AE000516
      0.04% cov
    • Alignment Length
      1,551 bp
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183173361
      CP000854
    • Hit length
      6,636,827 bp
    • E Value
      0E0
    • BLAST Score
      1,212.5 bits
    • Similarity
      82.69%
    • Coverage
      89.3%
    • Alignment (schematic)

      SEQ ID NO 7
      89.3% cov
      CP000854
      0.02% cov
    • Alignment Length
      1,404 bp
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118568029
      CP000325
    • Hit length
      5,631,606 bp
    • E Value
      0E0
    • BLAST Score
      1,201.4 bits
    • Similarity
      82.54%
    • Coverage
      89.3%
    • Alignment (schematic)

      SEQ ID NO 7
      89.3% cov
      CP000325
      0.02% cov
    • Alignment Length
      1,403 bp
  • Mycobacterium avium subsp. paratuberculosis K-10

    Mycobacterium avium subsp. paratuberculosis K-10

    • Public DB hit
      GI:41400296
      AE016958
    • Hit length
      4,829,781 bp
    • E Value
      0E0
    • BLAST Score
      1,123.9 bits
    • Similarity
      82.2%
    • Coverage
      85.82%
    • Alignment (schematic)

      SEQ ID NO 7
      85.82% cov
      AE016958
      0.03% cov
    • Alignment Length
      1,354 bp
  • Mycobacterium avium 104

    Mycobacterium avium 104

    • Public DB hit
      GI:118163506
      CP000479
    • Hit length
      5,475,491 bp
    • E Value
      0E0
    • BLAST Score
      1,090.6 bits
    • Similarity
      81.77%
    • Coverage
      85.82%
    • Alignment (schematic)

      SEQ ID NO 7
      85.82% cov
      CP000479
      0.02% cov
    • Alignment Length
      1,355 bp
  • Mycobacterium leprae Br4923

    Mycobacterium leprae Br4923

    • Public DB hit
      GI:219932450
      FM211192
    • Hit length
      3,268,071 bp
    • E Value
      0E0
    • BLAST Score
      1,059.3 bits
    • Similarity
      81.17%
    • Coverage
      86.27%
    • Alignment (schematic)

      SEQ ID NO 7
      86.27% cov
      FM211192
      0.04% cov
    • Alignment Length
      1,354 bp
  • Mycobacterium leprae

    Mycobacterium leprae

    • Public DB hit
      GI:13092922
      AL583920
      1 of 2 hits reported for Mycobacterium leprae.
    • Hit length
      348,450 bp
    • E Value
      0E0
    • BLAST Score
      1,059.3 bits
    • Similarity
      81.17%
    • Coverage
      86.27%
    • Alignment (schematic)

      SEQ ID NO 7
      86.27% cov
      AL583920
      0.38% cov
    • Alignment Length
      1,354 bp
  • Mycobacterium vanbaalenii PYR-1

    Mycobacterium vanbaalenii PYR-1

    • Public DB hit
      GI:119953846
      CP000511
    • Hit length
      6,491,865 bp
    • E Value
      0E0
    • BLAST Score
      649.3 bits
    • Similarity
      76.48%
    • Coverage
      84.78%
    • Alignment (schematic)

      SEQ ID NO 7
      84.78% cov
      CP000511
      0.02% cov
    • Alignment Length
      1,369 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
8
Length
516
Sequence Type
peptide
Locations
Claims, Fulltext
Declared organism
Mycobacterium tuberculosis variant bovis
Determined organism
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31793352
      NP_855845
    • Hit length
      516 aa
    • E Value
      0E0
    • BLAST Score
      1,004.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_855845
      100% cov
    • Alignment Length
      516 aa
    • CIGAR string
      516M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:15609311
      NP_216690
    • Hit length
      516 aa
    • E Value
      0E0
    • BLAST Score
      1,003.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_216690
      100% cov
    • Alignment Length
      516 aa
    • CIGAR string
      450MN65M mismatches: 1 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:15841664
      NP_336701
    • Hit length
      516 aa
    • E Value
      0E0
    • BLAST Score
      1,001.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_336701
      100% cov
    • Alignment Length
      516 aa
    • CIGAR string
      311MN138MN65M mismatches: 2 - insertions: 0 - deletions: 0
  • Mycobacterium canettii CIPT 140010059

    Mycobacterium canettii CIPT 140010059

    • Public DB hit
      GI:340627180
      YP_004745632
      1 of 2 hits reported for Mycobacterium canettii CIPT 140010059.
    • Hit length
      516 aa
    • E Value
      0E0
    • BLAST Score
      1,000.7 bits
    • Similarity
      99.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_004745632
      100% cov
    • Alignment Length
      516 aa
  • Mycobacterium tuberculosis SUMu002

    Mycobacterium tuberculosis SUMu002

    • Public DB hit
      GI:306780201
      ZP_07418538
      1 of 2 hits reported for Mycobacterium tuberculosis SUMu002.
    • Hit length
      516 aa
    • E Value
      0E0
    • BLAST Score
      1,000.7 bits
    • Similarity
      99.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_07418538
      100% cov
    • Alignment Length
      516 aa
  • Mycobacterium tuberculosis CCDC5180

    Mycobacterium tuberculosis CCDC5180

    • Public DB hit
      GI:385991517
      YP_005909815
    • Hit length
      505 aa
    • E Value
      0E0
    • BLAST Score
      979.2 bits
    • Similarity
      100%
    • Coverage
      97.87%
    • Alignment (schematic)

      SEQ ID NO 8
      97.87% cov
      YP_005909815
      100% cov
    • Alignment Length
      505 aa
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121638054
      YP_978278
    • Hit length
      567 aa
    • E Value
      0E0
    • BLAST Score
      968 bits
    • Similarity
      100%
    • Coverage
      96.51%
    • Alignment (schematic)

      SEQ ID NO 8
      96.51% cov
      YP_978278
      87.83% cov
    • Alignment Length
      498 aa
  • Mycobacterium tuberculosis 02_1987

    Mycobacterium tuberculosis 02_1987

    • Public DB hit
      GI:289745447
      ZP_06504825
    • Hit length
      519 aa
    • E Value
      0E0
    • BLAST Score
      938.3 bits
    • Similarity
      98.8%
    • Coverage
      97.09%
    • Alignment (schematic)

      SEQ ID NO 8
      97.09% cov
      ZP_06504825
      96.72% cov
    • Alignment Length
      502 aa
  • Mycobacterium tuberculosis RGTB327

    Mycobacterium tuberculosis RGTB327

    • Public DB hit
      GI:383307977
      YP_005360788
    • Hit length
      456 aa
    • E Value
      0E0
    • BLAST Score
      880.2 bits
    • Similarity
      100%
    • Coverage
      87.98%
    • Alignment (schematic)

      SEQ ID NO 8
      87.98% cov
      YP_005360788
      99.56% cov
    • Alignment Length
      454 aa
  • Mycobacterium tuberculosis RGTB423

    Mycobacterium tuberculosis RGTB423

    • Public DB hit
      GI:386005113
      YP_005923392
    • Hit length
      427 aa
    • E Value
      0E0
    • BLAST Score
      827 bits
    • Similarity
      100%
    • Coverage
      82.75%
    • Alignment (schematic)

      SEQ ID NO 8
      82.75% cov
      YP_005923392
      100% cov
    • Alignment Length
      427 aa
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183983199
      YP_001851490
    • Hit length
      526 aa
    • E Value
      0E0
    • BLAST Score
      824.7 bits
    • Similarity
      89.82%
    • Coverage
      99.03%
    • Alignment (schematic)

      SEQ ID NO 8
      99.03% cov
      YP_001851490
      96.96% cov
    • Alignment Length
      511 aa
  • Mycobacterium kansasii ATCC 12478

    Mycobacterium kansasii ATCC 12478

    • Public DB hit
      GI:240168233
      ZP_04746892
    • Hit length
      513 aa
    • E Value
      0E0
    • BLAST Score
      810.4 bits
    • Similarity
      87.84%
    • Coverage
      98.84%
    • Alignment (schematic)

      SEQ ID NO 8
      98.84% cov
      ZP_04746892
      99.22% cov
    • Alignment Length
      510 aa
  • Mycobacterium colombiense CECT 3035

    Mycobacterium colombiense CECT 3035

    • Public DB hit
      GI:342859884
      ZP_08716537
    • Hit length
      513 aa
    • E Value
      0E0
    • BLAST Score
      798.5 bits
    • Similarity
      88.19%
    • Coverage
      98.45%
    • Alignment (schematic)

      SEQ ID NO 8
      98.45% cov
      ZP_08716537
      99.03% cov
    • Alignment Length
      508 aa
Occurrence
6 times in PatSeqDB
Tools
SEQ ID NO
9
Length
22
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP001662
      0% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP001658
      0% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AP010918
      0% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP000717
      0% cov
    • Alignment Length
      22 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      CP000611
      0% cov
    • Alignment Length
      22 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AM408590
      0% cov
    • Alignment Length
      22 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AE000516
      0% cov
    • Alignment Length
      22 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:38684030
      BX842577
    • Hit length
      347,496 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BX842577
      0.01% cov
    • Alignment Length
      22 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31618223
      BX248339
    • Hit length
      300,050 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      BX248339
      0.01% cov
    • Alignment Length
      22 bp
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
10
Length
24
Sequence Type
DNA
Locations
Undetermined
Declared organism
Artificial
Determined organism
  • Mycobacterium tuberculosis KZN 4207

    Mycobacterium tuberculosis KZN 4207

    • Public DB hit
      GI:328456706
      CP001662
    • Hit length
      4,394,985 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001662
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis KZN 1435

    Mycobacterium tuberculosis KZN 1435

    • Public DB hit
      GI:253318418
      CP001658
    • Hit length
      4,398,250 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP001658
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium bovis BCG str. Tokyo 172

    Mycobacterium bovis BCG str. Tokyo 172

    • Public DB hit
      GI:224771496
      AP010918
    • Hit length
      4,371,711 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AP010918
      0% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Mycobacterium tuberculosis F11

    Mycobacterium tuberculosis F11

    • Public DB hit
      GI:148719718
      CP000717
    • Hit length
      4,424,435 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000717
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Ra

    Mycobacterium tuberculosis H37Ra

    • Public DB hit
      GI:148503909
      CP000611
    • Hit length
      4,419,977 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000611
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis BCG str. Pasteur 1173P2

    Mycobacterium bovis BCG str. Pasteur 1173P2

    • Public DB hit
      GI:121491530
      AM408590
    • Hit length
      4,374,522 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AM408590
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis CDC1551

    Mycobacterium tuberculosis CDC1551

    • Public DB hit
      GI:50952454
      AE000516
    • Hit length
      4,403,837 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AE000516
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium tuberculosis H37Rv

    Mycobacterium tuberculosis H37Rv

    • Public DB hit
      GI:38684030
      BX842577
    • Hit length
      347,496 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BX842577
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium bovis AF2122/97

    Mycobacterium bovis AF2122/97

    • Public DB hit
      GI:31618223
      BX248339
    • Hit length
      300,050 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      BX248339
      0.01% cov
    • Alignment Length
      24 bp
  • Mycobacterium marinum M

    Mycobacterium marinum M

    • Public DB hit
      GI:183173361
      CP000854
    • Hit length
      6,636,827 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000854
      0% cov
    • Alignment Length
      24 bp
  • Mycobacterium ulcerans Agy99

    Mycobacterium ulcerans Agy99

    • Public DB hit
      GI:118568029
      CP000325
    • Hit length
      5,631,606 bp
    • E Value
      1.68E-1
    • BLAST Score
      40.1 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      CP000325
      0% cov
    • Alignment Length
      24 bp
  • Isosphaera pallida ATCC 43644

    Isosphaera pallida ATCC 43644

    • Public DB hit
      GI:319748837
      CP002353
    • Hit length
      5,472,964 bp
    • E Value
      2.62E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      91.67%
    • Alignment (schematic)

      SEQ ID NO 10
      91.67% cov
      CP002353
      0% cov
    • Alignment Length
      22 bp
Occurrence
4 times in PatSeqDB
Tools

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