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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
16 sequences found in this patent (in total)

Displaying 1 - 10 of 16 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
20
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:301171358
      NR_034682
      1 of 2 hits reported for Ornithorhynchus anatinus.
    • Hit length
      135 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_034682
      14.81% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:297139692
      NR_031890
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      83 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_031890
      24.1% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:270132849
      NR_031974
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      86 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_031974
      23.26% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132607
      NR_032179
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      85 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_032179
      23.53% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132522
      NR_032415
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      86 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_032415
      23.26% cov
    • Alignment Length
      20 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270132423
      NR_032900
      1 of 2 hits reported for Equus caballus.
    • Hit length
      66 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_032900
      30.3% cov
    • Alignment Length
      20 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269847867
      NR_031025
      1 of 2 hits reported for Bos taurus.
    • Hit length
      84 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_031025
      23.81% cov
    • Alignment Length
      20 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269846996
      NR_031585
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      85 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_031585
      23.53% cov
    • Alignment Length
      20 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:262206082
      NR_030092
      1 of 2 hits reported for Danio rerio.
    • Hit length
      89 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_030092
      22.47% cov
    • Alignment Length
      20 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262205959
      NR_029556
      1 of 2 hits reported for Mus musculus.
    • Hit length
      66 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_029556
      30.3% cov
    • Alignment Length
      20 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262205324
      NR_029685
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      86 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NR_029685
      23.26% cov
    • Alignment Length
      20 bp
Occurrence
324 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172128
      NR_035700
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      82 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_035700
      26.83% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132616
      NR_032437
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      83 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_032437
      26.51% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262205232
      NR_030177
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      83 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_030177
      26.51% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:301173202
      NR_034635
      1 of 2 hits reported for Ornithorhynchus anatinus.
    • Hit length
      95 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_034635
      23.16% cov
    • Alignment Length
      22 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:301172460
      NR_030106
      1 of 3 hits reported for Danio rerio.
    • Hit length
      85 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_030106
      25.88% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270132529
      NR_032928
      1 of 2 hits reported for Equus caballus.
    • Hit length
      69 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_032928
      31.88% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269847070
      NR_031097
      1 of 2 hits reported for Bos taurus.
    • Hit length
      83 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_031097
      26.51% cov
    • Alignment Length
      22 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269846826
      NR_031545
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      83 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_031545
      26.51% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262205815
      NR_030549
      1 of 2 hits reported for Mus musculus.
    • Hit length
      79 bp
    • E Value
      1.57E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NR_030549
      27.85% cov
    • Alignment Length
      22 bp
Occurrence
312 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:312147219
      NR_037324
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      120 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_037324
      18.33% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172176
      NR_035706
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      89 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_035706
      24.72% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:301171539
      NR_034703
      1 of 2 hits reported for Ornithorhynchus anatinus.
    • Hit length
      114 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_034703
      19.3% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270133090
      NR_032795
      1 of 2 hits reported for Equus caballus.
    • Hit length
      90 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_032795
      24.44% cov
    • Alignment Length
      22 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132812
      NR_032222
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      86 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_032222
      25.58% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132646
      NR_032444
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      90 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_032444
      24.44% cov
    • Alignment Length
      22 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269847623
      NR_031473
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      87 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_031473
      25.29% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269847029
      NR_031343
      1 of 2 hits reported for Bos taurus.
    • Hit length
      86 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_031343
      25.58% cov
    • Alignment Length
      22 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:262206172
      NR_030111
      1 of 2 hits reported for Danio rerio.
    • Hit length
      86 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_030111
      25.58% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206071
      NR_029834
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      90 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_029834
      24.44% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262205534
      NR_029723
      1 of 2 hits reported for Mus musculus.
    • Hit length
      90 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NR_029723
      24.44% cov
    • Alignment Length
      22 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:149728273
      EF640742
    • Hit length
      22 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EF640742
      100% cov
    • Alignment Length
      22 bp
Occurrence
490 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:301171548
      NR_034704
      1 of 2 hits reported for Ornithorhynchus anatinus.
    • Hit length
      109 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_034704
      20.18% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:297139671
      NR_031917
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      95 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_031917
      23.16% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270133094
      NR_032796
      1 of 2 hits reported for Equus caballus.
    • Hit length
      69 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_032796
      31.88% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132805
      NR_032221
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      68 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_032221
      32.35% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269847637
      NR_030970
      1 of 2 hits reported for Bos taurus.
    • Hit length
      59 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_030970
      37.29% cov
    • Alignment Length
      22 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269847629
      NR_031474
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      85 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_031474
      25.88% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206358
      NR_029639
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      95 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029639
      23.16% cov
    • Alignment Length
      22 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:262206177
      NR_030112
      1 of 3 hits reported for Danio rerio.
    • Hit length
      82 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_030112
      26.83% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262206115
      NR_029587
      1 of 4 hits reported for Mus musculus.
    • Hit length
      70 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NR_029587
      31.43% cov
    • Alignment Length
      22 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:149728392
      EF640746
    • Hit length
      23 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EF640746
      95.65% cov
    • Alignment Length
      22 bp
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:149389373
      EF638018
    • Hit length
      23 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      EF638018
      95.65% cov
    • Alignment Length
      22 bp
Occurrence
350 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
23
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:312147347
      NR_037367
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      115 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_037367
      20% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132769
      NR_032215
      1 of 2 hits reported for Monodelphis domestica.
    • Hit length
      68 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_032215
      33.82% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132753
      NR_031956
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      68 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_031956
      33.82% cov
    • Alignment Length
      23 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270132248
      NR_032856
      1 of 2 hits reported for Equus caballus.
    • Hit length
      64 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_032856
      35.94% cov
    • Alignment Length
      23 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269847033
      NR_031344
      1 of 3 hits reported for Bos taurus.
    • Hit length
      65 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_031344
      35.38% cov
    • Alignment Length
      23 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262205860
      NR_029792
      1 of 4 hits reported for Mus musculus.
    • Hit length
      69 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029792
      33.33% cov
    • Alignment Length
      23 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262205800
      NR_029779
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      68 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NR_029779
      33.82% cov
    • Alignment Length
      23 bp
  • Pan paniscus

    Pan paniscus

    • Public DB hit
      GI:57902630
      AY865828
    • Hit length
      608 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY865828
      3.78% cov
    • Alignment Length
      23 bp
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:57902629
      AY865827
    • Hit length
      669 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY865827
      3.44% cov
    • Alignment Length
      23 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:57902628
      AY865826
    • Hit length
      754 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AY865826
      3.05% cov
    • Alignment Length
      23 bp
Occurrence
408 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:312147205
      NR_037319
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      115 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_037319
      19.13% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172192
      NR_035708
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      109 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_035708
      20.18% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132650
      NR_032445
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_032445
      20% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206272
      NR_029620
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_029620
      20% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262206129
      NR_029590
      1 of 4 hits reported for Mus musculus.
    • Hit length
      76 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NR_029590
      28.95% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:149728817
      EF640787
    • Hit length
      22 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EF640787
      100% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:149389414
      EF638059
    • Hit length
      22 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      EF638059
      100% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326921085
      XM_003206747
      1 of 2 hits reported for Meleagris gallopavo.
    • Hit length
      2,025 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 6
      90.91% cov
      XM_003206747
      0.99% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132657
      NR_032191
    • Hit length
      81 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 6
      90.91% cov
      NR_032191
      24.69% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269847468
      NR_031438
    • Hit length
      98 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 6
      90.91% cov
      NR_031438
      20.41% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M2H mismatches: 0 - insertions: 0 - deletions: 0
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:262205293
      NR_029933
    • Hit length
      96 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 6
      90.91% cov
      NR_029933
      20.83% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M2H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
387 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:336285451
      NR_038514
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      76 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_038514
      28.95% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:312147346
      NR_037366
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      118 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_037366
      18.64% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172234
      NR_035713
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      109 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_035713
      20.18% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132676
      NR_032451
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_032451
      20% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206286
      NR_029623
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_029623
      20% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262205864
      NR_029793
      1 of 4 hits reported for Mus musculus.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_029793
      20% cov
    • Alignment Length
      22 bp
  • Ovis aries

    Ovis aries

    • Public DB hit
      GI:149728922
      EF640791
    • Hit length
      22 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF640791
      100% cov
    • Alignment Length
      22 bp
  • Capra hircus

    Capra hircus

    • Public DB hit
      GI:149389418
      EF638063
    • Hit length
      22 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EF638063
      100% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:109390127
      DQ642648
      1 of 2 hits reported for Bos taurus.
    • Hit length
      23 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      DQ642648
      95.65% cov
    • Alignment Length
      22 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:301172710
      NR_034982
    • Hit length
      82 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 7
      90.91% cov
      NR_034982
      24.39% cov
    • Alignment Length
      20 bp
Occurrence
386 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
23
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:270133346
      NR_032083
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      110 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_032083
      20.91% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270133336
      NR_032081
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      110 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_032081
      20.91% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206310
      NR_029628
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      110 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_029628
      20.91% cov
    • Alignment Length
      23 bp
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca nemestrina

    Macaca nemestrina

    • Public DB hit
      GI:57903125
      AY866323
    • Hit length
      645 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AY866323
      3.57% cov
    • Alignment Length
      23 bp
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:57903123
      AY866321
    • Hit length
      757 bp
    • E Value
      2.17E-3
    • BLAST Score
      46.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AY866321
      3.04% cov
    • Alignment Length
      23 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:336285463
      NR_038518
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      96 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_038518
      23.96% cov
    • Alignment Length
      23 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270133151
      NR_033066
      1 of 2 hits reported for Equus caballus.
    • Hit length
      110 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NR_033066
      20.91% cov
    • Alignment Length
      23 bp
  • Gorilla gorilla

    Gorilla gorilla

    • Public DB hit
      GI:57903124
      AY866322
    • Hit length
      687 bp
    • E Value
      5.3E-1
    • BLAST Score
      38.2 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AY866322
      3.35% cov
    • Alignment Length
      23 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:301172719
      NR_034983
    • Hit length
      103 bp
    • E Value
      2.09E0
    • BLAST Score
      36.2 bits
    • Similarity
      95.45%
    • Coverage
      95.65%
    • Alignment (schematic)

      SEQ ID NO 8
      95.65% cov
      NR_034983
      21.36% cov
    • Alignment Length
      22 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:336285160
      NR_038545
      1 of 4 hits reported for Sus scrofa.
    • Hit length
      80 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_038545
      27.5% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332239926
      XM_003269095
    • Hit length
      697 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XM_003269095
      3.16% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:301173211
      NR_034636
    • Hit length
      83 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_034636
      26.51% cov
    • Alignment Length
      22 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172746
      NR_035769
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      110 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_035769
      20% cov
    • Alignment Length
      22 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:301172645
      NR_034209
      1 of 3 hits reported for Danio rerio.
    • Hit length
      99 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_034209
      22.22% cov
    • Alignment Length
      22 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:296923787
      NR_031952
    • Hit length
      86 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_031952
      25.58% cov
    • Alignment Length
      22 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132867
      NR_032490
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      111 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_032490
      19.82% cov
    • Alignment Length
      22 bp
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:270132707
      NR_032202
    • Hit length
      87 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_032202
      25.29% cov
    • Alignment Length
      22 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:270132537
      NR_032930
      1 of 2 hits reported for Equus caballus.
    • Hit length
      87 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_032930
      25.29% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269846897
      NR_031313
      1 of 2 hits reported for Bos taurus.
    • Hit length
      111 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_031313
      19.82% cov
    • Alignment Length
      22 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269846850
      NR_031551
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      96 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_031551
      22.92% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206176
      NR_029856
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      111 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_029856
      19.82% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:262206171
      NR_029855
      1 of 2 hits reported for Mus musculus.
    • Hit length
      87 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NR_029855
      25.29% cov
    • Alignment Length
      22 bp
Occurrence
392 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
22
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334347184
      XM_001364443
      1 of 4 hits reported for Monodelphis domestica.
    • Hit length
      941 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001364443
      2.34% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:301172842
      NR_035777
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      63 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_035777
      34.92% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:297206789
      NR_032271
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      75 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_032271
      29.33% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:270132905
      NR_032498
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      64 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_032498
      34.38% cov
    • Alignment Length
      22 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:269847799
      NR_029876
      1 of 4 hits reported for Mus musculus.
    • Hit length
      64 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_029876
      34.38% cov
    • Alignment Length
      22 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:269846921
      NR_031317
      1 of 2 hits reported for Bos taurus.
    • Hit length
      64 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_031317
      34.38% cov
    • Alignment Length
      22 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:262206227
      NR_029867
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      64 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NR_029867
      34.38% cov
    • Alignment Length
      22 bp
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:301172676
      NR_030133
      1 of 3 hits reported for Danio rerio.
    • Hit length
      83 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 10
      90.91% cov
      NR_030133
      24.1% cov
    • Alignment Length
      20 bp
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:269846854
      NR_031552
    • Hit length
      65 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 10
      90.91% cov
      NR_031552
      30.77% cov
    • Alignment Length
      20 bp
Occurrence
475 times in PatSeqDB
Tools
PatSeq Finder

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