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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
2 sequences found in this patent (in total)

Displaying 2 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
12,455
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Cloning vector pr8a

    Cloning vector pr8a

    • Public DB hit
      GI:199427735
      FM209526
    • Hit length
      9,041 bp
    • E Value
      0E0
    • BLAST Score
      8,017.4 bits
    • Similarity
      99.98%
    • Coverage
      34.89%
    • Alignment (schematic)

      SEQ ID NO 1
      34.89% cov
      FM209526
      48.05% cov
    • Alignment Length
      4,345 bp
    • CIGAR string
      26H4338MD6M8084H mismatches: 0 - insertions: 0 - deletions: 1
  • Cloning vector pBR322

    Cloning vector pBR322

    • Public DB hit
      GI:208958
      J01749
    • Hit length
      4,361 bp
    • E Value
      0E0
    • BLAST Score
      8,013.7 bits
    • Similarity
      100%
    • Coverage
      34.84%
    • Alignment (schematic)

      SEQ ID NO 1
      34.84% cov
      J01749
      99.5% cov
    • Alignment Length
      4,339 bp
    • CIGAR string
      26H4339M8090H mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector YRp7

    Cloning vector YRp7

    • Public DB hit
      GI:416343
      U03501
    • Hit length
      5,817 bp
    • E Value
      0E0
    • BLAST Score
      7,999 bits
    • Similarity
      99.95%
    • Coverage
      34.81%
    • Alignment (schematic)

      SEQ ID NO 1
      34.81% cov
      U03501
      74.57% cov
    • Alignment Length
      4,338 bp
    • CIGAR string
      26H1871MI21MI2444M8093H mismatches: 0 - insertions: 2 - deletions: 0
  • Cloning vector YEp213

    Cloning vector YEp213

    • Public DB hit
      GI:416341
      U03499
    • Hit length
      10,667 bp
    • E Value
      0E0
    • BLAST Score
      7,999 bits
    • Similarity
      99.91%
    • Coverage
      34.86%
    • Alignment (schematic)

      SEQ ID NO 1
      34.86% cov
      U03499
      40.72% cov
    • Alignment Length
      4,345 bp
  • Cloning vector YEp13

    Cloning vector YEp13

    • Public DB hit
      GI:416340
      U03498
    • Hit length
      10,667 bp
    • E Value
      0E0
    • BLAST Score
      7,999 bits
    • Similarity
      99.91%
    • Coverage
      34.86%
    • Alignment (schematic)

      SEQ ID NO 1
      34.86% cov
      U03498
      40.72% cov
    • Alignment Length
      4,345 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:310760
      L08855
      1 of 4 hits reported for synthetic construct.
    • Hit length
      5,996 bp
    • E Value
      0E0
    • BLAST Score
      7,995.3 bits
    • Similarity
      99.95%
    • Coverage
      34.8%
    • Alignment (schematic)

      SEQ ID NO 1
      34.8% cov
      L08855
      72.31% cov
    • Alignment Length
      4,336 bp
  • Cloning vector pHRS-9

    Cloning vector pHRS-9

    • Public DB hit
      GI:31075616
      AY289598
    • Hit length
      8,530 bp
    • E Value
      0E0
    • BLAST Score
      7,984.2 bits
    • Similarity
      99.95%
    • Coverage
      34.75%
    • Alignment (schematic)

      SEQ ID NO 1
      34.75% cov
      AY289598
      50.76% cov
    • Alignment Length
      4,330 bp
  • Cloning vector pSUP202

    Cloning vector pSUP202

    • Public DB hit
      GI:45386989
      AY428809
    • Hit length
      7,830 bp
    • E Value
      0E0
    • BLAST Score
      7,956.5 bits
    • Similarity
      99.79%
    • Coverage
      34.8%
    • Alignment (schematic)

      SEQ ID NO 1
      34.8% cov
      AY428809
      55.38% cov
    • Alignment Length
      4,338 bp
  • Cloning vector pALTER(R)-1

    Cloning vector pALTER(R)-1

    • Public DB hit
      GI:13620161
      X65334
    • Hit length
      5,676 bp
    • E Value
      0E0
    • BLAST Score
      7,941.7 bits
    • Similarity
      99.77%
    • Coverage
      34.78%
    • Alignment (schematic)

      SEQ ID NO 1
      34.78% cov
      X65334
      76.25% cov
    • Alignment Length
      4,332 bp
  • Cloning vector pALTER-Ex1

    Cloning vector pALTER-Ex1

    • Public DB hit
      GI:13937413
      U47102
    • Hit length
      5,854 bp
    • E Value
      0E0
    • BLAST Score
      7,928.8 bits
    • Similarity
      99.72%
    • Coverage
      34.77%
    • Alignment (schematic)

      SEQ ID NO 1
      34.77% cov
      U47102
      73.92% cov
    • Alignment Length
      4,331 bp
  • Cloning vector pDO19

    Cloning vector pDO19

    • Public DB hit
      GI:424109
      U03461
    • Hit length
      11,581 bp
    • E Value
      0E0
    • BLAST Score
      7,818 bits
    • Similarity
      99.86%
    • Coverage
      34.12%
    • Alignment (schematic)

      SEQ ID NO 1
      34.12% cov
      U03461
      36.72% cov
    • Alignment Length
      4,253 bp
  • Cloning vector pDO17

    Cloning vector pDO17

    • Public DB hit
      GI:424107
      U03459
    • Hit length
      12,035 bp
    • E Value
      0E0
    • BLAST Score
      7,818 bits
    • Similarity
      99.86%
    • Coverage
      34.12%
    • Alignment (schematic)

      SEQ ID NO 1
      34.12% cov
      U03459
      35.33% cov
    • Alignment Length
      4,253 bp
  • Sequencing vector pAA3.7X

    Sequencing vector pAA3.7X

    • Public DB hit
      GI:150807
      M11320
    • Hit length
      9,583 bp
    • E Value
      0E0
    • BLAST Score
      7,818 bits
    • Similarity
      99.86%
    • Coverage
      34.12%
    • Alignment (schematic)

      SEQ ID NO 1
      34.12% cov
      M11320
      44.37% cov
    • Alignment Length
      4,253 bp
  • Cloning vector pKK388-1

    Cloning vector pKK388-1

    • Public DB hit
      GI:413810
      U02444
    • Hit length
      5,075 bp
    • E Value
      0E0
    • BLAST Score
      7,720.1 bits
    • Similarity
      99.98%
    • Coverage
      33.58%
    • Alignment (schematic)

      SEQ ID NO 1
      33.58% cov
      U02444
      82.42% cov
    • Alignment Length
      4,183 bp
  • RNA transcription vector pBRDI2

    RNA transcription vector pBRDI2

    • Public DB hit
      GI:28916167
      AY204705
    • Hit length
      13,822 bp
    • E Value
      0E0
    • BLAST Score
      7,712.7 bits
    • Similarity
      100%
    • Coverage
      33.53%
    • Alignment (schematic)

      SEQ ID NO 1
      33.53% cov
      AY204705
      30.21% cov
    • Alignment Length
      4,176 bp
  • RNA transcription vector pBRDI1

    RNA transcription vector pBRDI1

    • Public DB hit
      GI:28916157
      AY204704
    • Hit length
      14,201 bp
    • E Value
      0E0
    • BLAST Score
      7,712.7 bits
    • Similarity
      100%
    • Coverage
      33.53%
    • Alignment (schematic)

      SEQ ID NO 1
      33.53% cov
      AY204704
      29.41% cov
    • Alignment Length
      4,176 bp
  • Cloning vector pDO184

    Cloning vector pDO184

    • Public DB hit
      GI:424108
      U03460
    • Hit length
      9,820 bp
    • E Value
      0E0
    • BLAST Score
      7,454.2 bits
    • Similarity
      99.88%
    • Coverage
      32.52%
    • Alignment (schematic)

      SEQ ID NO 1
      32.52% cov
      U03460
      41.26% cov
    • Alignment Length
      4,053 bp
  • Expression vector LIC-pDEST-LC2

    Expression vector LIC-pDEST-LC2

    • Public DB hit
      GI:332650943
      JF327847
    • Hit length
      6,349 bp
    • E Value
      0E0
    • BLAST Score
      7,387.7 bits
    • Similarity
      99.85%
    • Coverage
      32.24%
    • Alignment (schematic)

      SEQ ID NO 1
      32.24% cov
      JF327847
      63.33% cov
    • Alignment Length
      4,021 bp
  • Expression vector LIC-pDEST-LC1

    Expression vector LIC-pDEST-LC1

    • Public DB hit
      GI:332650941
      JF327846
    • Hit length
      6,366 bp
    • E Value
      0E0
    • BLAST Score
      7,387.7 bits
    • Similarity
      99.85%
    • Coverage
      32.24%
    • Alignment (schematic)

      SEQ ID NO 1
      32.24% cov
      JF327846
      63.16% cov
    • Alignment Length
      4,021 bp
  • Plasmid pETHIS-1

    Plasmid pETHIS-1

    • Public DB hit
      GI:2815579
      AF012911
    • Hit length
      4,273 bp
    • E Value
      0E0
    • BLAST Score
      7,371.1 bits
    • Similarity
      99.85%
    • Coverage
      32.2%
    • Alignment (schematic)

      SEQ ID NO 1
      32.2% cov
      AF012911
      93.8% cov
    • Alignment Length
      4,012 bp
  • Cloning vector YEP46

    Cloning vector YEP46

    • Public DB hit
      GI:6318567
      AF134781
    • Hit length
      7,876 bp
    • E Value
      0E0
    • BLAST Score
      7,360 bits
    • Similarity
      99.95%
    • Coverage
      32.04%
    • Alignment (schematic)

      SEQ ID NO 1
      32.04% cov
      AF134781
      50.69% cov
    • Alignment Length
      3,992 bp
  • unidentified cloning vector

    unidentified cloning vector

    • Public DB hit
      GI:2190698
      U89928
    • Hit length
      5,429 bp
    • E Value
      0E0
    • BLAST Score
      7,358.2 bits
    • Similarity
      100%
    • Coverage
      31.99%
    • Alignment (schematic)

      SEQ ID NO 1
      31.99% cov
      U89928
      73.38% cov
    • Alignment Length
      3,984 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
19
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Geobacillus thermoglucosidasius C56-YS93

    Geobacillus thermoglucosidasius C56-YS93

    • Public DB hit
      GI:335360401
      CP002835
    • Hit length
      3,893,306 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002835
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus amyloliquefaciens LL3

    Bacillus amyloliquefaciens LL3

    • Public DB hit
      GI:328909959
      CP002634
    • Hit length
      3,995,227 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002634
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus amyloliquefaciens TA208

    Bacillus amyloliquefaciens TA208

    • Public DB hit
      GI:328551700
      CP002627
    • Hit length
      3,937,511 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002627
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Bacillus thuringiensis serovar finitimus YBT-020

    Bacillus thuringiensis serovar finitimus YBT-020

    • Public DB hit
      GI:324323994
      CP002508
    • Hit length
      5,355,490 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002508
      0% cov
    • Alignment Length
      19 bp
  • Bacillus subtilis BSn5

    Bacillus subtilis BSn5

    • Public DB hit
      GI:320017650
      CP002468
    • Hit length
      4,093,599 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002468
      0% cov
    • Alignment Length
      19 bp
  • Geobacillus sp. Y4.1MC1

    Geobacillus sp. Y4.1MC1

    • Public DB hit
      GI:311214252
      CP002293
    • Hit length
      3,840,330 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002293
      0% cov
    • Alignment Length
      19 bp
  • Bacillus atrophaeus 1942

    Bacillus atrophaeus 1942

    • Public DB hit
      GI:310867486
      CP002207
    • Hit length
      4,168,266 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002207
      0% cov
    • Alignment Length
      19 bp
  • Paenibacillus polymyxa SC2

    Paenibacillus polymyxa SC2

    • Public DB hit
      GI:309244421
      CP002213
    • Hit length
      5,731,816 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002213
      0% cov
    • Alignment Length
      19 bp
  • Bacillus amyloliquefaciens DSM 7

    Bacillus amyloliquefaciens DSM 7

    • Public DB hit
      GI:307604755
      FN597644
    • Hit length
      3,980,199 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      FN597644
      0% cov
    • Alignment Length
      19 bp
  • Paenibacillus polymyxa E681

    Paenibacillus polymyxa E681

    • Public DB hit
      GI:305856117
      CP000154
    • Hit length
      5,394,884 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000154
      0% cov
    • Alignment Length
      19 bp
  • Bacillus subtilis subsp. spizizenii str. W23

    Bacillus subtilis subsp. spizizenii str. W23

    • Public DB hit
      GI:305410941
      CP002183
    • Hit length
      4,027,676 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002183
      0% cov
    • Alignment Length
      19 bp
  • Bacillus cereus biovar anthracis str. CI

    Bacillus cereus biovar anthracis str. CI

    • Public DB hit
      GI:300373910
      CP001746
    • Hit length
      5,196,054 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001746
      0% cov
    • Alignment Length
      19 bp
  • Ralstonia solanacearum CMR15

    Ralstonia solanacearum CMR15

    • Public DB hit
      GI:299065054
      FP885895
    • Hit length
      3,596,030 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      FP885895
      0% cov
    • Alignment Length
      19 bp
  • Moraxella catarrhalis BBH18

    Moraxella catarrhalis BBH18

    • Public DB hit
      GI:295919923
      CP002005
    • Hit length
      1,863,286 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002005
      0% cov
    • Alignment Length
      19 bp
  • Staphylococcus lugdunensis HKU09-01

    Staphylococcus lugdunensis HKU09-01

    • Public DB hit
      GI:289178903
      CP001837
    • Hit length
      2,658,366 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001837
      0% cov
    • Alignment Length
      19 bp
  • Listeria monocytogenes 08-5923

    Listeria monocytogenes 08-5923

    • Public DB hit
      GI:284058907
      CP001604
    • Hit length
      2,999,054 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001604
      0% cov
    • Alignment Length
      19 bp
  • Listeria monocytogenes 08-5578

    Listeria monocytogenes 08-5578

    • Public DB hit
      GI:284055817
      CP001602
    • Hit length
      3,032,288 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001602
      0% cov
    • Alignment Length
      19 bp
  • Paenibacillus sp. JDR-2

    Paenibacillus sp. JDR-2

    • Public DB hit
      GI:247541662
      CP001656
    • Hit length
      7,184,930 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001656
      0% cov
    • Alignment Length
      19 bp
  • Bacillus anthracis str. A0248

    Bacillus anthracis str. A0248

    • Public DB hit
      GI:229264291
      CP001598
    • Hit length
      5,227,419 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001598
      0% cov
    • Alignment Length
      19 bp
  • Bacillus anthracis str. CDC 684

    Bacillus anthracis str. CDC 684

    • Public DB hit
      GI:227002338
      CP001215
    • Hit length
      5,230,115 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001215
      0% cov
    • Alignment Length
      19 bp
  • Brevibacillus brevis NBRC 100599

    Brevibacillus brevis NBRC 100599

    • Public DB hit
      GI:226092535
      AP008955
    • Hit length
      6,296,436 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AP008955
      0% cov
    • Alignment Length
      19 bp
  • Bacillus cereus 03BB102

    Bacillus cereus 03BB102

    • Public DB hit
      GI:225785631
      CP001407
    • Hit length
      5,269,628 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001407
      0% cov
    • Alignment Length
      19 bp
  • Bacillus subtilis subsp. subtilis str. 168

    Bacillus subtilis subsp. subtilis str. 168

    • Public DB hit
      GI:225184640
      AL009126
    • Hit length
      4,215,606 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AL009126
      0% cov
    • Alignment Length
      19 bp
  • Bacillus cereus Q1

    Bacillus cereus Q1

    • Public DB hit
      GI:221237819
      CP000227
    • Hit length
      5,214,195 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000227
      0% cov
    • Alignment Length
      19 bp
  • Bacillus cereus AH820

    Bacillus cereus AH820

    • Public DB hit
      GI:218534755
      CP001283
    • Hit length
      5,302,683 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001283
      0% cov
    • Alignment Length
      19 bp
Occurrence
69 times in PatSeqDB
Tools
PatSeq Finder

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