Herpes Virus Entry Receptor Protein

  • Published: Sep 18, 2001
  • Earliest Priority: Jul 28 1995
  • Family: 6
  • Cited Works: 66
  • Cited by: 7
  • Cites: 2
  • Sequences: 7
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext EMBL-EBI Pat DDBJ Pat NCBI GenBank
7 sequences found in this patent (in total)

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Download sequences in fasta format: 2 peptides 5 DNAs

Displaying 7 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,724
Sequence Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2138189
      U70321
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      1,724 bp
    • E Value
      0E0
    • BLAST Score
      3,184.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U70321
      100% cov
    • Alignment Length
      1,724 bp
    • CIGAR string
      1724M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114550634
      XM_513730
    • Hit length
      2,310 bp
    • E Value
      0E0
    • BLAST Score
      2,965 bits
    • Similarity
      98.07%
    • Coverage
      98.67%
    • Alignment (schematic)

      SEQ ID NO 1
      98.67% cov
      XM_513730
      73.9% cov
    • Alignment Length
      1,708 bp
    • CIGAR string
      6MN176M6I23MN132MN2MN189MN2MN26MN113MN62MN132MN74MN109MN57MN50MN50MN5MN44MN218MN18MN28MN22MN13MN15MN13MN16MD2MI6MN72M23H mismatches: 25 - insertions: 7 - deletions: 1
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297666663
      XM_002811589
    • Hit length
      1,577 bp
    • E Value
      0E0
    • BLAST Score
      1,825.6 bits
    • Similarity
      96.4%
    • Coverage
      64.33%
    • Alignment (schematic)

      SEQ ID NO 1
      64.33% cov
      XM_002811589
      70.26% cov
    • Alignment Length
      1,111 bp
    • CIGAR string
      592H37MN10MN36MN7MN182MN3MN10MN33MI3MD26MN44MN26MN37MN38MN12MN5MN50MN50MN89MN52MN2MN2MN19MN12MN40MN3MN41MN2MN5MN24MD14MN23MN12MN14M2N25MN3MND2MI6MN72M23H mismatches: 35 - insertions: 2 - deletions: 3
Occurrence
41 times in PatSeqDB
Tools
SEQ ID NO
2
Length
283
Sequence Type
peptide
Locations
Detailed Description, Drawings, Summary
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2138190
      AAB58354
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      283 aa
    • E Value
      8.39E-163
    • BLAST Score
      577.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAB58354
      100% cov
    • Alignment Length
      283 aa
    • CIGAR string
      283M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:124000491
      ABM87754
      1 of 3 hits reported for synthetic construct.
    • Hit length
      283 aa
    • E Value
      4.41E-162
    • BLAST Score
      575.5 bits
    • Similarity
      99.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ABM87754
      100% cov
    • Alignment Length
      283 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114550635
      XP_513730
    • Hit length
      283 aa
    • E Value
      1.28E-151
    • BLAST Score
      540.8 bits
    • Similarity
      98.89%
    • Coverage
      95.76%
    • Alignment (schematic)

      SEQ ID NO 2
      95.76% cov
      XP_513730
      95.76% cov
    • Alignment Length
      271 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:112983640
      NP_001036822
    • Hit length
      281 aa
    • E Value
      7.52E-134
    • BLAST Score
      481.5 bits
    • Similarity
      88.97%
    • Coverage
      98.94%
    • Alignment (schematic)

      SEQ ID NO 2
      98.94% cov
      NP_001036822
      100% cov
    • Alignment Length
      281 aa
  • Chlorocebus aethiops

    Chlorocebus aethiops

    • Public DB hit
      GI:5002248
      AAD37381
    • Hit length
      283 aa
    • E Value
      3.8E-129
    • BLAST Score
      466.1 bits
    • Similarity
      88.34%
    • Coverage
      98.94%
    • Alignment (schematic)

      SEQ ID NO 2
      98.94% cov
      AAD37381
      100% cov
    • Alignment Length
      283 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332267475
      XP_003282707
    • Hit length
      245 aa
    • E Value
      5.15E-117
    • BLAST Score
      425.6 bits
    • Similarity
      95.48%
    • Coverage
      78.09%
    • Alignment (schematic)

      SEQ ID NO 2
      78.09% cov
      XP_003282707
      90.2% cov
    • Alignment Length
      221 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297666664
      XP_002811635
    • Hit length
      199 aa
    • E Value
      2.02E-98
    • BLAST Score
      364 bits
    • Similarity
      98.91%
    • Coverage
      64.66%
    • Alignment (schematic)

      SEQ ID NO 2
      64.66% cov
      XP_002811635
      91.96% cov
    • Alignment Length
      183 aa
Occurrence
145 times in PatSeqDB
Tools
SEQ ID NO
3
Length
21
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Cricetulus griseus

    Cricetulus griseus

    • Public DB hit
      GI:71610983
      AB183827
    • Hit length
      1,710 bp
    • E Value
      2.55E-2
    • BLAST Score
      42.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AB183827
      1.23% cov
    • Alignment Length
      21 bp
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
15 times in PatSeqDB
Tools
SEQ ID NO
4
Length
22
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
5
Length
19
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Pantoea sp. At-9b

    Pantoea sp. At-9b

    • Public DB hit
      GI:316951815
      CP002434
    • Hit length
      793,953 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP002434
      0% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:165127
      K00752
    • Hit length
      1,235 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      K00752
      1.54% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
6
Length
4,622
Sequence Type
DNA
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
Occurrence
5 times in PatSeqDB
Tools
SEQ ID NO
7
Length
419
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
Occurrence
5 times in PatSeqDB
Tools

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