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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
55 sequences found in this patent (in total)

Displaying 1 - 10 of 55 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
10,182
Type
nucleotide
Locations
Claims, Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160707948
      NM_004992
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      10,241 bp
    • E Value
      0E0
    • BLAST Score
      18,803.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_004992
      99.42% cov
    • Alignment Length
      10,182 bp
    • CIGAR string
      10182M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:110349808
      CT827814
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      163,866 bp
    • E Value
      0E0
    • BLAST Score
      17,470.4 bits
    • Similarity
      99.39%
    • Coverage
      94.66%
    • Alignment (schematic)

      SEQ ID NO 1
      94.66% cov
      CT827814
      5.88% cov
    • Alignment Length
      9,639 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297305073
      XM_001088566
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      10,478 bp
    • E Value
      0E0
    • BLAST Score
      16,214.7 bits
    • Similarity
      95.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XM_001088566
      96.99% cov
    • Alignment Length
      10,249 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:154091193
      AC202458
    • Hit length
      210,893 bp
    • E Value
      0E0
    • BLAST Score
      15,429.9 bits
    • Similarity
      97.61%
    • Coverage
      88.4%
    • Alignment (schematic)

      SEQ ID NO 1
      88.4% cov
      AC202458
      4.27% cov
    • Alignment Length
      9,037 bp
Occurrence
51 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
486
Type
peptide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4826830
      NP_004983
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      953.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_004983
      100% cov
    • Alignment Length
      486 aa
    • CIGAR string
      486M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296236735
      XP_002763454
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      952.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002763454
      100% cov
    • Alignment Length
      486 aa
    • CIGAR string
      37MN448M mismatches: 1 - insertions: 0 - deletions: 0
  • Callicebus moloch

    Callicebus moloch

    • Public DB hit
      GI:170649629
      ACB21216
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      951 bits
    • Similarity
      99.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACB21216
      100% cov
    • Alignment Length
      486 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297711430
      XP_002832346
    • Hit length
      489 aa
    • E Value
      0E0
    • BLAST Score
      933.3 bits
    • Similarity
      100%
    • Coverage
      98.15%
    • Alignment (schematic)

      SEQ ID NO 2
      98.15% cov
      XP_002832346
      97.55% cov
    • Alignment Length
      477 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301786889
      XP_002928858
    • Hit length
      483 aa
    • E Value
      0E0
    • BLAST Score
      755 bits
    • Similarity
      95.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002928858
      100% cov
    • Alignment Length
      486 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330864700
      NP_001193481
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      743 bits
    • Similarity
      96.91%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001193481
      100% cov
    • Alignment Length
      486 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149758807
      XP_001494268
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      738.8 bits
    • Similarity
      97.94%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001494268
      100% cov
    • Alignment Length
      486 aa
Occurrence
233 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,504
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160707949
      NM_001110792
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      1,734 bp
    • E Value
      0E0
    • BLAST Score
      2,778.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001110792
      86.74% cov
    • Alignment Length
      1,504 bp
    • CIGAR string
      1504M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
    • Hit length
      2,478 bp
    • E Value
      0E0
    • BLAST Score
      2,756.3 bits
    • Similarity
      99.73%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_521333
      60.69% cov
    • Alignment Length
      1,504 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:157928321
      EU176656
      1 of 3 hits reported for synthetic construct.
    • Hit length
      1,501 bp
    • E Value
      0E0
    • BLAST Score
      2,647.4 bits
    • Similarity
      100%
    • Coverage
      95.28%
    • Alignment (schematic)

      SEQ ID NO 3
      95.28% cov
      EU176656
      95.47% cov
    • Alignment Length
      1,433 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
498
Type
peptide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160707950
      NP_001104262
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      498 aa
    • E Value
      0E0
    • BLAST Score
      974.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001104262
      100% cov
    • Alignment Length
      498 aa
    • CIGAR string
      498M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297711430
      XP_002832346
    • Hit length
      489 aa
    • E Value
      0E0
    • BLAST Score
      936.8 bits
    • Similarity
      98.77%
    • Coverage
      97.79%
    • Alignment (schematic)

      SEQ ID NO 4
      97.79% cov
      XP_002832346
      99.59% cov
    • Alignment Length
      487 aa
    • CIGAR string
      11H2MNM6N477M mismatches: 7 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296236735
      XP_002763454
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      932.9 bits
    • Similarity
      100%
    • Coverage
      95.78%
    • Alignment (schematic)

      SEQ ID NO 4
      95.78% cov
      XP_002763454
      98.15% cov
    • Alignment Length
      477 aa
  • Callicebus moloch

    Callicebus moloch

    • Public DB hit
      GI:170649629
      ACB21216
    • Hit length
      486 aa
    • E Value
      0E0
    • BLAST Score
      931.4 bits
    • Similarity
      99.79%
    • Coverage
      95.78%
    • Alignment (schematic)

      SEQ ID NO 4
      95.78% cov
      ACB21216
      98.15% cov
    • Alignment Length
      477 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281341235
      EFB16819
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      474 aa
    • E Value
      0E0
    • BLAST Score
      735.7 bits
    • Similarity
      94.97%
    • Coverage
      95.78%
    • Alignment (schematic)

      SEQ ID NO 4
      95.78% cov
      EFB16819
      100% cov
    • Alignment Length
      477 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:284004980
      NP_001164841
    • Hit length
      497 aa
    • E Value
      0E0
    • BLAST Score
      723.8 bits
    • Similarity
      98.52%
    • Coverage
      94.78%
    • Alignment (schematic)

      SEQ ID NO 4
      94.78% cov
      NP_001164841
      94.77% cov
    • Alignment Length
      472 aa
Occurrence
153 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
18
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160624914
      NG_007107
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      82,866 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NG_007107
      0.02% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,478 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_521333
      0.73% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332260670
      XM_003279358
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,184 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_003279358
      0.82% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297305073
      XM_001088566
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      10,478 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001088566
      0.17% cov
    • Alignment Length
      18 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296236736
      XM_002763409
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,768 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_002763409
      1.02% cov
    • Alignment Length
      18 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:126517468
      NM_001081979
    • Hit length
      10,152 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001081979
      0.18% cov
    • Alignment Length
      18 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
20
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160624914
      NG_007107
      1 of 15 hits reported for Homo sapiens.
    • Hit length
      82,866 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NG_007107
      0.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_521333
      0.81% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332260670
      XM_003279358
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,184 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003279358
      0.92% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297711429
      XM_002832300
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,603 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002832300
      1.25% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297305073
      XM_001088566
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      10,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001088566
      0.19% cov
    • Alignment Length
      20 bp
Occurrence
54 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
20
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160624914
      NG_007107
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      82,866 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NG_007107
      0.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_521333
      0.81% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297711429
      XM_002832300
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,603 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_002832300
      1.25% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297305073
      XM_001088566
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      10,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_001088566
      0.19% cov
    • Alignment Length
      20 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:126517481
      NM_010788
      1 of 2 hits reported for Mus musculus.
    • Hit length
      10,233 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_010788
      0.2% cov
    • Alignment Length
      20 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:115312277
      NM_022673
    • Hit length
      1,711 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_022673
      1.17% cov
    • Alignment Length
      20 bp
  • Microtus levis

    Microtus levis

    • Public DB hit
      GI:305690619
      GU812374
    • Hit length
      534 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU812374
      3.75% cov
    • Alignment Length
      20 bp
  • Microtus arvalis

    Microtus arvalis

    • Public DB hit
      GI:305690618
      GU812373
    • Hit length
      535 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      GU812373
      3.74% cov
    • Alignment Length
      20 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
20
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160624914
      NG_007107
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      82,866 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NG_007107
      0.02% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_521333
      0.81% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332260670
      XM_003279358
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,184 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003279358
      0.92% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:330864699
      NM_001206552
      1 of 2 hits reported for Bos taurus.
    • Hit length
      10,224 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001206552
      0.2% cov
    • Alignment Length
      20 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297305073
      XM_001088566
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      10,478 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001088566
      0.19% cov
    • Alignment Length
      20 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296236736
      XM_002763409
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      1,768 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002763409
      1.13% cov
    • Alignment Length
      20 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:284004979
      NM_001171370
    • Hit length
      1,494 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_001171370
      1.34% cov
    • Alignment Length
      20 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:126517481
      NM_010788
      1 of 2 hits reported for Mus musculus.
    • Hit length
      10,233 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_010788
      0.2% cov
    • Alignment Length
      20 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:115312277
      NM_022673
    • Hit length
      1,711 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_022673
      1.17% cov
    • Alignment Length
      20 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:74008802
      XM_862378
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      1,542 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_862378
      1.3% cov
    • Alignment Length
      20 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
19
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:126517481
      NM_010788
      1 of 16 hits reported for Mus musculus.
    • Hit length
      10,233 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_010788
      0.19% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:115312277
      NM_022673
      1 of 5 hits reported for Rattus norvegicus.
    • Hit length
      1,711 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_022673
      1.11% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila grimshawi

    Drosophila grimshawi

    • Public DB hit
      GI:195025259
      XM_001985994
      1 of 2 hits reported for Drosophila grimshawi.
    • Hit length
      2,625 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 9
      94.74% cov
      XM_001985994
      0.69% cov
    • Alignment Length
      18 bp
  • Ferrimonas balearica DSM 9799

    Ferrimonas balearica DSM 9799

    • Public DB hit
      GI:307629912
      CP002209
    • Hit length
      4,279,159 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 9
      94.74% cov
      CP002209
      0% cov
    • Alignment Length
      18 bp
  • Methanosarcina acetivorans C2A

    Methanosarcina acetivorans C2A

    • Public DB hit
      GI:19918815
      AE010299
    • Hit length
      5,751,492 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 9
      94.74% cov
      AE010299
      0% cov
    • Alignment Length
      18 bp
Occurrence
22 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
22
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332861982
      XM_521333
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,478 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_521333
      0.89% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332260670
      XM_003279358
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,184 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003279358
      1.01% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:284004979
      NM_001171370
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      1,494 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001171370
      1.47% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:160707949
      NM_001110792
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,734 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001110792
      1.27% cov
    • Alignment Length
      22 bp
  • Ixodes scapularis

    Ixodes scapularis

    • Public DB hit
      GI:241749097
      XM_002405741
    • Hit length
      1,249 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 10
      90.91% cov
      XM_002405741
      1.6% cov
    • Alignment Length
      20 bp
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder

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