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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO PSIPS
956 sequences found in this patent (in total)

Displaying 1 - 10 of 956 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,588
Type
DNA
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
315
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:42573431
      NP_974812
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      472 aa
    • E Value
      0E0
    • BLAST Score
      656.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_974812
      66.74% cov
    • Alignment Length
      315 aa
    • CIGAR string
      315M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297807977
      XP_002871872
    • Hit length
      473 aa
    • E Value
      0E0
    • BLAST Score
      648.7 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002871872
      66.6% cov
    • Alignment Length
      315 aa
    • CIGAR string
      64MN3MN93MN129MN19MN2M mismatches: 5 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225432566
      XP_002277780
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      482 aa
    • E Value
      7.51E-142
    • BLAST Score
      508.4 bits
    • Similarity
      86.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002277780
      65.98% cov
    • Alignment Length
      318 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255552301
      XP_002517195
    • Hit length
      476 aa
    • E Value
      2.9E-140
    • BLAST Score
      503.1 bits
    • Similarity
      87.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002517195
      65.34% cov
    • Alignment Length
      315 aa
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224111250
      XP_002315792
    • Hit length
      310 aa
    • E Value
      2.42E-136
    • BLAST Score
      490.3 bits
    • Similarity
      86.13%
    • Coverage
      97.46%
    • Alignment (schematic)

      SEQ ID NO 2
      97.46% cov
      XP_002315792
      100% cov
    • Alignment Length
      310 aa
  • Medicago truncatula

    Medicago truncatula

    • Public DB hit
      GI:217074248
      ACJ85484
    • Hit length
      480 aa
    • E Value
      6.99E-133
    • BLAST Score
      478.8 bits
    • Similarity
      84.54%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 2
      99.68% cov
      ACJ85484
      66.04% cov
    • Alignment Length
      317 aa
  • Nicotiana tabacum

    Nicotiana tabacum

    • Public DB hit
      GI:11385586
      AAG34873
      1 of 3 hits reported for Nicotiana tabacum.
    • Hit length
      466 aa
    • E Value
      7.41E-131
    • BLAST Score
      471.9 bits
    • Similarity
      84.28%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAG34873
      68.24% cov
    • Alignment Length
      318 aa
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:143456767
      Q0JFN7
    • Hit length
      438 aa
    • E Value
      5.19E-125
    • BLAST Score
      452.6 bits
    • Similarity
      81.79%
    • Coverage
      99.37%
    • Alignment (schematic)

      SEQ ID NO 2
      99.37% cov
      Q0JFN7
      69.86% cov
    • Alignment Length
      313 aa
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326519807
      BAK00276
    • Hit length
      448 aa
    • E Value
      1.56E-121
    • BLAST Score
      441 bits
    • Similarity
      80.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAK00276
      68.75% cov
    • Alignment Length
      315 aa
  • Zea mays

    Zea mays

    • Public DB hit
      GI:226509832
      NP_001147746
      1 of 2 hits reported for Zea mays.
    • Hit length
      447 aa
    • E Value
      1.51E-114
    • BLAST Score
      417.9 bits
    • Similarity
      81.21%
    • Coverage
      99.05%
    • Alignment (schematic)

      SEQ ID NO 2
      99.05% cov
      NP_001147746
      68.68% cov
    • Alignment Length
      314 aa
  • Picea sitchensis

    Picea sitchensis

    • Public DB hit
      GI:294462398
      ADE76747
    • Hit length
      329 aa
    • E Value
      3.7E-112
    • BLAST Score
      409.8 bits
    • Similarity
      76.45%
    • Coverage
      99.37%
    • Alignment (schematic)

      SEQ ID NO 2
      99.37% cov
      ADE76747
      98.78% cov
    • Alignment Length
      327 aa
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
681
Type
DNA
Locations
Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:145357692
      NM_120689
      1 of 6 hits reported for Arabidopsis thaliana.
    • Hit length
      1,037 bp
    • E Value
      0E0
    • BLAST Score
      1,258.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_120689
      65.67% cov
    • Alignment Length
      681 bp
    • CIGAR string
      681M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297810702
      XM_002873189
    • Hit length
      934 bp
    • E Value
      0E0
    • BLAST Score
      1,053.7 bits
    • Similarity
      94.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002873189
      72.91% cov
    • Alignment Length
      681 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
153
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:18415088
      NP_568161
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      226 aa
    • E Value
      4.93E-84
    • BLAST Score
      314.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_568161
      67.7% cov
    • Alignment Length
      153 aa
    • CIGAR string
      153M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297810703
      XP_002873235
    • Hit length
      226 aa
    • E Value
      2.18E-78
    • BLAST Score
      295.4 bits
    • Similarity
      97.39%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002873235
      67.7% cov
    • Alignment Length
      153 aa
    • CIGAR string
      25MN2MN42MN6MN12MN10MN13MN11MNMN22M mismatches: 9 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,518
Type
DNA
Locations
Undetermined

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:330250293
      CP002685
      1 of 8 hits reported for Arabidopsis thaliana.
    • Hit length
      19,698,289 bp
    • E Value
      0E0
    • BLAST Score
      2,804.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      CP002685
      0.01% cov
    • Alignment Length
      1,518 bp
    • CIGAR string
      1518M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297823740
      XM_002879707
    • Hit length
      1,561 bp
    • E Value
      0E0
    • BLAST Score
      1,570.8 bits
    • Similarity
      95.79%
    • Coverage
      64.1%
    • Alignment (schematic)

      SEQ ID NO 5
      64.1% cov
      XM_002879707
      62.33% cov
    • Alignment Length
      974 bp
  • Eutrema halophilum

    Eutrema halophilum

    • Public DB hit
      GI:312283192
      AK353376
    • Hit length
      1,516 bp
    • E Value
      0E0
    • BLAST Score
      1,050 bits
    • Similarity
      86.3%
    • Coverage
      64.23%
    • Alignment (schematic)

      SEQ ID NO 5
      64.23% cov
      AK353376
      64.91% cov
    • Alignment Length
      1,000 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
378
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Arabidopsis thaliana

Determined organism:
  • Arabidopsis thaliana

    Arabidopsis thaliana

    • Public DB hit
      GI:15224901
      NP_181390
      1 of 2 hits reported for Arabidopsis thaliana.
    • Hit length
      378 aa
    • E Value
      0E0
    • BLAST Score
      774.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_181390
      100% cov
    • Alignment Length
      378 aa
    • CIGAR string
      378M mismatches: 0 - insertions: 0 - deletions: 0
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297823741
      XP_002879753
    • Hit length
      378 aa
    • E Value
      0E0
    • BLAST Score
      683.7 bits
    • Similarity
      97.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002879753
      100% cov
    • Alignment Length
      378 aa
    • CIGAR string
      6MN17MN9MN32MNMN17MN24MN32MN9M2NMN34MN25MN14MN42MN25MN74M mismatches: 16 - insertions: 0 - deletions: 0
  • Eutrema halophilum

    Eutrema halophilum

    • Public DB hit
      GI:312283193
      BAJ34462
    • Hit length
      381 aa
    • E Value
      6.84E-180
    • BLAST Score
      635.2 bits
    • Similarity
      90.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BAJ34462
      100% cov
    • Alignment Length
      383 aa
  • Ricinus communis

    Ricinus communis

    • Public DB hit
      GI:255575598
      XP_002528699
    • Hit length
      342 aa
    • E Value
      3.54E-116
    • BLAST Score
      423.7 bits
    • Similarity
      75.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002528699
      100% cov
    • Alignment Length
      381 aa
Occurrence
52 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
367
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Oryza sativa

Determined organism:
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115456173
      NP_001051687
      1 of 4 hits reported for Oryza sativa Japonica Group.
    • Hit length
      367 aa
    • E Value
      0E0
    • BLAST Score
      759.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001051687
      100% cov
    • Alignment Length
      367 aa
    • CIGAR string
      367M mismatches: 0 - insertions: 0 - deletions: 0
  • Zea mays

    Zea mays

    • Public DB hit
      GI:226498648
      NP_001142260
      1 of 4 hits reported for Zea mays.
    • Hit length
      367 aa
    • E Value
      3.11E-165
    • BLAST Score
      586.6 bits
    • Similarity
      88.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_001142260
      100% cov
    • Alignment Length
      368 aa
    • CIGAR string
      9MN8MN2M2N5MN5M2N3M2N2MN2MN11MN7MN2M2NMN2MN7MN2MI5M2N2M2NM2NM4N2M2N4MNMN3MNMNMN3MNM2N5M3N4M3NMNM2NMN5M2N2M2N2MDMN3MN28MN2M2NM2N3MN3MN11MN16MN20MN10MN3MN4MN4MN8MN2MN13MN49M mismatches: 71 - insertions: 1 - deletions: 1
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242032519
      XP_002463654
    • Hit length
      368 aa
    • E Value
      2.57E-164
    • BLAST Score
      583.6 bits
    • Similarity
      88.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002463654
      100% cov
    • Alignment Length
      368 aa
  • Oryza sativa Indica Group

    Oryza sativa Indica Group

    • Public DB hit
      GI:125557745
      EAZ03281
    • Hit length
      373 aa
    • E Value
      1.21E-136
    • BLAST Score
      491.5 bits
    • Similarity
      77.6%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      EAZ03281
      100% cov
    • Alignment Length
      375 aa
Occurrence
35 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
368
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Glycine max

Occurrence
37 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
368
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Zea mays

Determined organism:
  • Zea mays

    Zea mays

    • Public DB hit
      GI:226504526
      NP_001149284
      1 of 4 hits reported for Zea mays.
    • Hit length
      368 aa
    • E Value
      0E0
    • BLAST Score
      758.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001149284
      100% cov
    • Alignment Length
      368 aa
    • CIGAR string
      368M mismatches: 0 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242032519
      XP_002463654
    • Hit length
      368 aa
    • E Value
      0E0
    • BLAST Score
      655.2 bits
    • Similarity
      93.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002463654
      100% cov
    • Alignment Length
      368 aa
    • CIGAR string
      MN16MNMN2MN4MN79MNM2NMN10MN12M3N5MN4M2N12MN6MN3MNMNMN25M2N6MN13MNMN7MN10MN3MNM2N12MN11MNMN2MN3MN23MN3M2N11MN37M mismatches: 40 - insertions: 0 - deletions: 0
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115456173
      NP_001051687
      1 of 2 hits reported for Oryza sativa Japonica Group.
    • Hit length
      367 aa
    • E Value
      3.55E-161
    • BLAST Score
      573.2 bits
    • Similarity
      88.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_001051687
      100% cov
    • Alignment Length
      368 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
368
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Zea mays

Determined organism:
  • Zea mays

    Zea mays

    • Public DB hit
      GI:195622302
      ACG32981
      1 of 4 hits reported for Zea mays.
    • Hit length
      368 aa
    • E Value
      0E0
    • BLAST Score
      758.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ACG32981
      100% cov
    • Alignment Length
      368 aa
    • CIGAR string
      368M mismatches: 0 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242032519
      XP_002463654
    • Hit length
      368 aa
    • E Value
      0E0
    • BLAST Score
      663.3 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002463654
      100% cov
    • Alignment Length
      368 aa
    • CIGAR string
      MN15M2NMN2MN4MN82MNMN10MN12M2N6MN4M2N12MN4MNMN3MNMNMN25M2N6MN6MN6MN9MN10MN3MNM2N24MNMN2MN4MN22MN3M2N11MN37M mismatches: 38 - insertions: 0 - deletions: 0
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115456173
      NP_001051687
      1 of 2 hits reported for Oryza sativa Japonica Group.
    • Hit length
      367 aa
    • E Value
      6.69E-160
    • BLAST Score
      568.9 bits
    • Similarity
      87.77%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_001051687
      100% cov
    • Alignment Length
      368 aa
Occurrence
18 times in PatSeqDB
Tools
PatSeq Finder

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