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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
93 sequences found in this patent (in total)

Displaying 1 - 10 of 93 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
2,775
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Murine

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:746416
      U18812
      1 of 12 hits reported for Mus musculus.
    • Hit length
      2,793 bp
    • E Value
      0E0
    • BLAST Score
      5,077.6 bits
    • Similarity
      100%
    • Coverage
      99.06%
    • Alignment (schematic)

      SEQ ID NO 1
      99.06% cov
      U18812
      98.42% cov
    • Alignment Length
      2,749 bp
    • CIGAR string
      2749M26H mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:291463266
      NM_013076
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      3,290 bp
    • E Value
      0E0
    • BLAST Score
      2,998.2 bits
    • Similarity
      86.84%
    • Coverage
      97.33%
    • Alignment (schematic)

      SEQ ID NO 1
      97.33% cov
      NM_013076
      83.86% cov
    • Alignment Length
      2,805 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
167
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6678678
      NP_032519
      1 of 2 hits reported for Mus musculus.
    • Hit length
      167 aa
    • E Value
      1.14E-90
    • BLAST Score
      336.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_032519
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      167M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6981148
      NP_037208
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      167 aa
    • E Value
      6.93E-88
    • BLAST Score
      327 bits
    • Similarity
      98.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_037208
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      24MN28MN30MN13MN23MN39MN4M mismatches: 6 - insertions: 0 - deletions: 0
  • Notomys alexis

    Notomys alexis

    • Public DB hit
      GI:256692869
      ACV13199
    • Hit length
      167 aa
    • E Value
      1.67E-84
    • BLAST Score
      315.8 bits
    • Similarity
      96.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ACV13199
      100% cov
    • Alignment Length
      167 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:3024234
      O42164
    • Hit length
      163 aa
    • E Value
      8.91E-82
    • BLAST Score
      307 bits
    • Similarity
      95.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      O42164
      100% cov
    • Alignment Length
      167 aa
  • Ctenopharyngodon idella

    Ctenopharyngodon idella

    • Public DB hit
      GI:48526395
      AAT45394
    • Hit length
      146 aa
    • E Value
      2.43E-76
    • BLAST Score
      288.9 bits
    • Similarity
      100%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT45394
      100% cov
    • Alignment Length
      146 aa
  • Anguilla japonica

    Anguilla japonica

    • Public DB hit
      GI:110666863
      ABG81864
    • Hit length
      146 aa
    • E Value
      6.95E-76
    • BLAST Score
      287.3 bits
    • Similarity
      100%
    • Coverage
      86.83%
    • Alignment (schematic)

      SEQ ID NO 2
      86.83% cov
      ABG81864
      99.32% cov
    • Alignment Length
      145 aa
  • Cyprinus carpio

    Cyprinus carpio

    • Public DB hit
      GI:47498581
      AAT28186
    • Hit length
      146 aa
    • E Value
      8.56E-76
    • BLAST Score
      287 bits
    • Similarity
      100%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT28186
      100% cov
    • Alignment Length
      146 aa
  • Megalobrama amblycephala

    Megalobrama amblycephala

    • Public DB hit
      GI:48526403
      AAT45398
    • Hit length
      146 aa
    • E Value
      1.78E-75
    • BLAST Score
      285.8 bits
    • Similarity
      100%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT45398
      100% cov
    • Alignment Length
      146 aa
  • Silurus asotus

    Silurus asotus

    • Public DB hit
      GI:48526401
      AAT45397
    • Hit length
      146 aa
    • E Value
      1.36E-74
    • BLAST Score
      283.1 bits
    • Similarity
      99.32%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT45397
      100% cov
    • Alignment Length
      146 aa
  • Culter sp. TP-2004

    Culter sp. TP-2004

    • Public DB hit
      GI:47716909
      AAT37636
    • Hit length
      146 aa
    • E Value
      1.36E-74
    • BLAST Score
      283.1 bits
    • Similarity
      99.32%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT37636
      100% cov
    • Alignment Length
      146 aa
  • Channa argus

    Channa argus

    • Public DB hit
      GI:48526405
      AAT45399
    • Hit length
      146 aa
    • E Value
      2.2E-74
    • BLAST Score
      282.3 bits
    • Similarity
      99.32%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT45399
      100% cov
    • Alignment Length
      146 aa
  • Anas platyrhynchos

    Anas platyrhynchos

    • Public DB hit
      GI:47834166
      AAT38807
    • Hit length
      147 aa
    • E Value
      2.24E-74
    • BLAST Score
      282.3 bits
    • Similarity
      99.32%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT38807
      100% cov
    • Alignment Length
      147 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557715
      NP_000221
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      167 aa
    • E Value
      7.44E-74
    • BLAST Score
      280.4 bits
    • Similarity
      91.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_000221
      100% cov
    • Alignment Length
      167 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:255653078
      NP_001157452
    • Hit length
      167 aa
    • E Value
      1.13E-73
    • BLAST Score
      280 bits
    • Similarity
      93.25%
    • Coverage
      97.6%
    • Alignment (schematic)

      SEQ ID NO 2
      97.6% cov
      NP_001157452
      97.6% cov
    • Alignment Length
      163 aa
  • Hypophthalmichthys nobilis

    Hypophthalmichthys nobilis

    • Public DB hit
      GI:48526399
      AAT45396
    • Hit length
      146 aa
    • E Value
      1.27E-73
    • BLAST Score
      279.6 bits
    • Similarity
      98.63%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 2
      87.43% cov
      AAT45396
      100% cov
    • Alignment Length
      146 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:302488569
      NP_001180601
    • Hit length
      167 aa
    • E Value
      1.5E-73
    • BLAST Score
      279.6 bits
    • Similarity
      91.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001180601
      100% cov
    • Alignment Length
      167 aa
Occurrence
114 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
684
Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:169790920
      NM_000230
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      3,444 bp
    • E Value
      0E0
    • BLAST Score
      1,194.1 bits
    • Similarity
      98.39%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 3
      99.12% cov
      NM_000230
      19.74% cov
    • Alignment Length
      684 bp
    • CIGAR string
      6H12M3D11MI3M3IMIMI527MD22MN96M mismatches: 1 - insertions: 6 - deletions: 4
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681425
      XM_002818410
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,412 bp
    • E Value
      0E0
    • BLAST Score
      1,123.9 bits
    • Similarity
      97.16%
    • Coverage
      96.93%
    • Alignment (schematic)

      SEQ ID NO 3
      96.93% cov
      XM_002818410
      19.58% cov
    • Alignment Length
      669 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224366
      XM_003261290
    • Hit length
      3,451 bp
    • E Value
      0E0
    • BLAST Score
      1,077.7 bits
    • Similarity
      95.32%
    • Coverage
      99.12%
    • Alignment (schematic)

      SEQ ID NO 3
      99.12% cov
      XM_003261290
      19.7% cov
    • Alignment Length
      684 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
167
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557715
      NP_000221
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      167 aa
    • E Value
      5.52E-92
    • BLAST Score
      340.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_000221
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      167M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:302488569
      NP_001180601
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      167 aa
    • E Value
      1.49E-91
    • BLAST Score
      339.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001180601
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      93MN73M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681426
      XP_002818456
    • Hit length
      167 aa
    • E Value
      3.03E-90
    • BLAST Score
      335.1 bits
    • Similarity
      98.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002818456
      100% cov
    • Alignment Length
      167 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224367
      XP_003261338
    • Hit length
      167 aa
    • E Value
      8.05E-88
    • BLAST Score
      327 bits
    • Similarity
      97.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003261338
      100% cov
    • Alignment Length
      167 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:112363109
      NP_001036220
    • Hit length
      167 aa
    • E Value
      9.14E-82
    • BLAST Score
      307 bits
    • Similarity
      95.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001036220
      100% cov
    • Alignment Length
      167 aa
  • Rhinopithecus avunculus

    Rhinopithecus avunculus

    • Public DB hit
      GI:325484938
      ADZ16385
    • Hit length
      167 aa
    • E Value
      1.94E-81
    • BLAST Score
      305.8 bits
    • Similarity
      95.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADZ16385
      100% cov
    • Alignment Length
      167 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:255653078
      NP_001157452
    • Hit length
      167 aa
    • E Value
      1.18E-79
    • BLAST Score
      299.7 bits
    • Similarity
      94.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001157452
      100% cov
    • Alignment Length
      167 aa
  • Gorilla gorilla gorilla

    Gorilla gorilla gorilla

    • Public DB hit
      GI:2498683
      Q95189
    • Hit length
      146 aa
    • E Value
      1.49E-76
    • BLAST Score
      289.7 bits
    • Similarity
      100%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 4
      87.43% cov
      Q95189
      100% cov
    • Alignment Length
      146 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619023
      NP_001009850
    • Hit length
      167 aa
    • E Value
      1.64E-76
    • BLAST Score
      289.3 bits
    • Similarity
      91.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001009850
      100% cov
    • Alignment Length
      167 aa
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:2498685
      Q95234
    • Hit length
      146 aa
    • E Value
      6.84E-76
    • BLAST Score
      287.3 bits
    • Similarity
      98.63%
    • Coverage
      87.43%
    • Alignment (schematic)

      SEQ ID NO 4
      87.43% cov
      Q95234
      100% cov
    • Alignment Length
      146 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:243010668
      ACS94424
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      167 aa
    • E Value
      1.23E-75
    • BLAST Score
      286.6 bits
    • Similarity
      91.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ACS94424
      100% cov
    • Alignment Length
      167 aa
Occurrence
732 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
166
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Murine

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6678678
      NP_032519
      1 of 2 hits reported for Mus musculus.
    • Hit length
      167 aa
    • E Value
      1.3E-88
    • BLAST Score
      329.7 bits
    • Similarity
      99.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_032519
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      48MI118M mismatches: 0 - insertions: 1 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6981148
      NP_037208
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      167 aa
    • E Value
      5.47E-86
    • BLAST Score
      320.9 bits
    • Similarity
      98.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_037208
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      24MN23MI4MN30MN13MN23MN39MN4M mismatches: 6 - insertions: 1 - deletions: 0
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:3024234
      O42164
    • Hit length
      163 aa
    • E Value
      4.33E-83
    • BLAST Score
      311.2 bits
    • Similarity
      95.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      O42164
      100% cov
    • Alignment Length
      166 aa
  • Notomys alexis

    Notomys alexis

    • Public DB hit
      GI:256692869
      ACV13199
    • Hit length
      167 aa
    • E Value
      1.58E-82
    • BLAST Score
      309.3 bits
    • Similarity
      95.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ACV13199
      100% cov
    • Alignment Length
      167 aa
  • Ctenopharyngodon idella

    Ctenopharyngodon idella

    • Public DB hit
      GI:48526395
      AAT45394
    • Hit length
      146 aa
    • E Value
      2.25E-74
    • BLAST Score
      282.3 bits
    • Similarity
      99.32%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT45394
      100% cov
    • Alignment Length
      146 aa
  • Anguilla japonica

    Anguilla japonica

    • Public DB hit
      GI:110666863
      ABG81864
    • Hit length
      146 aa
    • E Value
      6.59E-74
    • BLAST Score
      280.8 bits
    • Similarity
      99.31%
    • Coverage
      86.75%
    • Alignment (schematic)

      SEQ ID NO 5
      86.75% cov
      ABG81864
      99.32% cov
    • Alignment Length
      145 aa
  • Cyprinus carpio

    Cyprinus carpio

    • Public DB hit
      GI:47498581
      AAT28186
    • Hit length
      146 aa
    • E Value
      7.29E-74
    • BLAST Score
      280.4 bits
    • Similarity
      99.32%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT28186
      100% cov
    • Alignment Length
      146 aa
  • Megalobrama amblycephala

    Megalobrama amblycephala

    • Public DB hit
      GI:48526403
      AAT45398
    • Hit length
      146 aa
    • E Value
      1.54E-73
    • BLAST Score
      279.6 bits
    • Similarity
      99.32%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT45398
      100% cov
    • Alignment Length
      146 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:904212
      BAA08448
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      166 aa
    • E Value
      2.1E-73
    • BLAST Score
      278.9 bits
    • Similarity
      90.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAA08448
      100% cov
    • Alignment Length
      166 aa
  • Culter sp. TP-2004

    Culter sp. TP-2004

    • Public DB hit
      GI:47716909
      AAT37636
    • Hit length
      146 aa
    • E Value
      1.05E-72
    • BLAST Score
      276.6 bits
    • Similarity
      98.63%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT37636
      100% cov
    • Alignment Length
      146 aa
  • Silurus asotus

    Silurus asotus

    • Public DB hit
      GI:48526401
      AAT45397
    • Hit length
      146 aa
    • E Value
      1.22E-72
    • BLAST Score
      276.6 bits
    • Similarity
      98.63%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT45397
      100% cov
    • Alignment Length
      146 aa
  • Channa argus

    Channa argus

    • Public DB hit
      GI:48526405
      AAT45399
    • Hit length
      146 aa
    • E Value
      2.03E-72
    • BLAST Score
      275.8 bits
    • Similarity
      98.63%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT45399
      100% cov
    • Alignment Length
      146 aa
  • Anas platyrhynchos

    Anas platyrhynchos

    • Public DB hit
      GI:47834166
      AAT38807
    • Hit length
      147 aa
    • E Value
      2.17E-72
    • BLAST Score
      275.8 bits
    • Similarity
      98.64%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT38807
      100% cov
    • Alignment Length
      147 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755234
      XP_002913466
    • Hit length
      166 aa
    • E Value
      9.13E-72
    • BLAST Score
      273.5 bits
    • Similarity
      92.59%
    • Coverage
      97.59%
    • Alignment (schematic)

      SEQ ID NO 5
      97.59% cov
      XP_002913466
      97.59% cov
    • Alignment Length
      162 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:255653078
      NP_001157452
    • Hit length
      167 aa
    • E Value
      9.76E-72
    • BLAST Score
      273.5 bits
    • Similarity
      92.64%
    • Coverage
      97.59%
    • Alignment (schematic)

      SEQ ID NO 5
      97.59% cov
      NP_001157452
      97.6% cov
    • Alignment Length
      163 aa
  • Hypophthalmichthys nobilis

    Hypophthalmichthys nobilis

    • Public DB hit
      GI:48526399
      AAT45396
    • Hit length
      146 aa
    • E Value
      1.08E-71
    • BLAST Score
      273.5 bits
    • Similarity
      97.95%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 5
      87.35% cov
      AAT45396
      100% cov
    • Alignment Length
      146 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:302488569
      NP_001180601
    • Hit length
      167 aa
    • E Value
      1.43E-71
    • BLAST Score
      273.1 bits
    • Similarity
      90.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_001180601
      100% cov
    • Alignment Length
      167 aa
Occurrence
27 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
166
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:904212
      BAA08448
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      166 aa
    • E Value
      2.39E-91
    • BLAST Score
      338.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BAA08448
      100% cov
    • Alignment Length
      166 aa
    • CIGAR string
      166M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:302488569
      NP_001180601
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      167 aa
    • E Value
      1.27E-89
    • BLAST Score
      332.8 bits
    • Similarity
      99.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001180601
      100% cov
    • Alignment Length
      167 aa
    • CIGAR string
      48MI44MN73M mismatches: 1 - insertions: 1 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297681426
      XP_002818456
    • Hit length
      167 aa
    • E Value
      2.71E-88
    • BLAST Score
      328.6 bits
    • Similarity
      98.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002818456
      100% cov
    • Alignment Length
      167 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332224367
      XP_003261338
    • Hit length
      167 aa
    • E Value
      6.91E-86
    • BLAST Score
      320.5 bits
    • Similarity
      96.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003261338
      100% cov
    • Alignment Length
      167 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:112363109
      NP_001036220
    • Hit length
      167 aa
    • E Value
      7.15E-80
    • BLAST Score
      300.4 bits
    • Similarity
      95.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001036220
      100% cov
    • Alignment Length
      167 aa
  • Rhinopithecus avunculus

    Rhinopithecus avunculus

    • Public DB hit
      GI:325484938
      ADZ16385
    • Hit length
      167 aa
    • E Value
      1.82E-79
    • BLAST Score
      299.3 bits
    • Similarity
      94.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ADZ16385
      100% cov
    • Alignment Length
      167 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:255653078
      NP_001157452
    • Hit length
      167 aa
    • E Value
      1.32E-77
    • BLAST Score
      293.1 bits
    • Similarity
      93.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001157452
      100% cov
    • Alignment Length
      167 aa
  • Gorilla gorilla gorilla

    Gorilla gorilla gorilla

    • Public DB hit
      GI:2498683
      Q95189
    • Hit length
      146 aa
    • E Value
      1.19E-74
    • BLAST Score
      283.1 bits
    • Similarity
      99.32%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 6
      87.35% cov
      Q95189
      100% cov
    • Alignment Length
      146 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619023
      NP_001009850
    • Hit length
      167 aa
    • E Value
      1.89E-74
    • BLAST Score
      282.3 bits
    • Similarity
      91.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001009850
      100% cov
    • Alignment Length
      167 aa
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:2498685
      Q95234
    • Hit length
      146 aa
    • E Value
      6.06E-74
    • BLAST Score
      280.8 bits
    • Similarity
      97.95%
    • Coverage
      87.35%
    • Alignment (schematic)

      SEQ ID NO 6
      87.35% cov
      Q95234
      100% cov
    • Alignment Length
      146 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755234
      XP_002913466
    • Hit length
      166 aa
    • E Value
      7.23E-74
    • BLAST Score
      280.4 bits
    • Similarity
      90.96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002913466
      100% cov
    • Alignment Length
      166 aa
Occurrence
69 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
176
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:34328437
      NM_008493
      1 of 10 hits reported for Mus musculus.
    • Hit length
      3,257 bp
    • E Value
      2.39E-73
    • BLAST Score
      283.7 bits
    • Similarity
      94.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_008493
      5.37% cov
    • Alignment Length
      176 bp
    • CIGAR string
      25MD30MN3MN4MN22MN40MN20MN8MN3MN12M mismatches: 8 - insertions: 0 - deletions: 1
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
2
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Occurrence
18133 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
5
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Occurrence
46 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
23
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:305861125
      ADM72802
      1 of 2 hits reported for Mus musculus.
    • Hit length
      167 aa
    • E Value
      5.53E-6
    • BLAST Score
      55.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ADM72802
      13.77% cov
    • Alignment Length
      23 aa
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:6981148
      NP_037208
    • Hit length
      167 aa
    • E Value
      6.54E-6
    • BLAST Score
      54.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_037208
      13.77% cov
    • Alignment Length
      23 aa
    • CIGAR string
      23M mismatches: 0 - insertions: 0 - deletions: 0
  • Notomys alexis

    Notomys alexis

    • Public DB hit
      GI:256692869
      ACV13199
    • Hit length
      167 aa
    • E Value
      7.6E-4
    • BLAST Score
      47.8 bits
    • Similarity
      95.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ACV13199
      13.77% cov
    • Alignment Length
      23 aa
  • Phocoena phocoena

    Phocoena phocoena

    • Public DB hit
      GI:81294750
      CAJ43198
    • Hit length
      138 aa
    • E Value
      1.67E-2
    • BLAST Score
      43.5 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      CAJ43198
      13.77% cov
    • Alignment Length
      19 aa
  • Neovison vison

    Neovison vison

    • Public DB hit
      GI:192293825
      ACE87887
    • Hit length
      166 aa
    • E Value
      1.1E-1
    • BLAST Score
      40.8 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      ACE87887
      11.45% cov
    • Alignment Length
      19 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619023
      NP_001009850
    • Hit length
      167 aa
    • E Value
      1.14E-1
    • BLAST Score
      40.8 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      NP_001009850
      11.38% cov
    • Alignment Length
      19 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:243010668
      ACS94424
      1 of 5 hits reported for Sus scrofa.
    • Hit length
      167 aa
    • E Value
      1.18E-1
    • BLAST Score
      40.4 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      ACS94424
      11.38% cov
    • Alignment Length
      19 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301755234
      XP_002913466
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      166 aa
    • E Value
      1.51E-1
    • BLAST Score
      40.4 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      XP_002913466
      11.45% cov
    • Alignment Length
      19 aa
  • Ursus thibetanus

    Ursus thibetanus

    • Public DB hit
      GI:97071742
      Q1XG29
    • Hit length
      167 aa
    • E Value
      1.53E-1
    • BLAST Score
      40 bits
    • Similarity
      94.74%
    • Coverage
      82.61%
    • Alignment (schematic)

      SEQ ID NO 10
      82.61% cov
      Q1XG29
      11.38% cov
    • Alignment Length
      19 aa
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:3024234
      O42164
    • Hit length
      163 aa
    • E Value
      1.6E-1
    • BLAST Score
      40 bits
    • Similarity
      82.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      O42164
      12.27% cov
    • Alignment Length
      23 aa
Occurrence
18 times in PatSeqDB
Tools
PatSeq Finder

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