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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
379 sequences found in this patent (in total)

Displaying 1 - 10 of 379 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
9,078
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:13569237
      AF286226
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      8,978 bp
    • E Value
      0E0
    • BLAST Score
      16,188.9 bits
    • Similarity
      99.24%
    • Coverage
      98.81%
    • Alignment (schematic)

      SEQ ID NO 1
      98.81% cov
      AF286226
      99.92% cov
    • Alignment Length
      8,974 bp
    • CIGAR string
      31H330MN55MD2MI38MN288MN338MN4MN159MN228MN23MN194MN680MN29MN29MN133MN66MN79MN164MN158MN97MN344MN419MN29MN82MN98MN217MN281MN15MN120MN448MN20MN144MN4MN215MN130MN56MN153MN113MN329MI5MD33MN315MN38MN118M2N35MN146MN11MN55MN110MIMD4MN237MN290MN10MN91MN5MN15MN23MN181MN237MN65MN205MN10MN72MN111MN21MI25MN126M77H mismatches: 61 - insertions: 4 - deletions: 3
Occurrence
16 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
4,288
Type
nucleotide
Locations
Claims, Detailed Description, Summary

Declared organism:
Human immunodeficiency virus

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
2,605
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Human immunodeficiency virus

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:37414026
      AY181197
      1 of 9 hits reported for synthetic construct.
    • Hit length
      2,607 bp
    • E Value
      0E0
    • BLAST Score
      2,870.8 bits
    • Similarity
      87.62%
    • Coverage
      95.43%
    • Alignment (schematic)

      SEQ ID NO 3
      95.43% cov
      AY181197
      96.39% cov
    • Alignment Length
      2,545 bp
    • CIGAR string
      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 mismatches: 224 - insertions: 59 - deletions: 32
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:282761977
      ADA84589
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      864 aa
    • E Value
      8.41E-15
    • BLAST Score
      84.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADA84589
      4.05% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:49617645
      AAT67518
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      852 aa
    • E Value
      7.24E-13
    • BLAST Score
      77.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AAT67518
      4.11% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:3252964
      AAD12112
      1 of 24 hits reported for Human immunodeficiency virus 1.
    • Hit length
      843 aa
    • E Value
      2.25E-14
    • BLAST Score
      82.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAD12112
      4.15% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:298162250
      ADI59551
    • Hit length
      1,165 aa
    • E Value
      2.66E-14
    • BLAST Score
      82.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ADI59551
      3% cov
    • Alignment Length
      35 aa
    • CIGAR string
      26MN8M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:148725743
      CAK49344
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      862 aa
    • E Value
      1.05E-13
    • BLAST Score
      80.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CAK49344
      4.06% cov
    • Alignment Length
      35 aa
    • CIGAR string
      MN9MN23M mismatches: 2 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:298162250
      ADI59551
    • Hit length
      1,165 aa
    • E Value
      3.14E-14
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ADI59551
      3% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:262211592
      ACY35640
      1 of 24 hits reported for Human immunodeficiency virus 1.
    • Hit length
      858 aa
    • E Value
      3.17E-14
    • BLAST Score
      82.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ACY35640
      4.08% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
24 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:119366592
      ABL67451
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      862 aa
    • E Value
      8.77E-14
    • BLAST Score
      80.9 bits
    • Similarity
      97.14%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      ABL67451
      4.06% cov
    • Alignment Length
      35 aa
    • CIGAR string
      11MN23M mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
35
Type
peptide
Locations
Detailed Description

Declared organism:
Human immunodeficiency virus

Determined organism:
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:316937515
      ADU60719
      1 of 25 hits reported for Human immunodeficiency virus 1.
    • Hit length
      860 aa
    • E Value
      2.11E-14
    • BLAST Score
      83.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      ADU60719
      4.07% cov
    • Alignment Length
      35 aa
    • CIGAR string
      35M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder

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