Inhibitors Of Ncca-atp Channels For Therapy

Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
15 sequences found in this patent (in total)

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Displaying 1 - 10 of 15 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
18
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Leishmania donovani BPK282A1

    Leishmania donovani BPK282A1

    • Public DB hit
      GI:322498401
      FR799606
    • Hit length
      757,180 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 1
      94.44% cov
      FR799606
      0% cov
    • Alignment Length
      17 bp
    • CIGAR string
      1H17M mismatches: 0 - insertions: 0 - deletions: 0
  • Leishmania infantum JPCM5

    Leishmania infantum JPCM5

    • Public DB hit
      GI:321399305
      FR796451
    • Hit length
      742,501 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 1
      94.44% cov
      FR796451
      0% cov
    • Alignment Length
      17 bp
    • CIGAR string
      1H17M mismatches: 0 - insertions: 0 - deletions: 0
  • Pseudomonas fluorescens

    Pseudomonas fluorescens

    • Public DB hit
      GI:37542630
      AY061859
    • Hit length
      17,974 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 1
      94.44% cov
      AY061859
      0.09% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M1H mismatches: 0 - insertions: 0 - deletions: 0
  • Leishmania donovani

    Leishmania donovani

    • Public DB hit
      GI:13518079
      AY028171
    • Hit length
      44,273 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 1
      94.44% cov
      AY028171
      0.04% cov
    • Alignment Length
      17 bp
  • Leishmania infantum

    Leishmania infantum

    • Public DB hit
      GI:79759162
      AM118098
    • Hit length
      4,272 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 1
      94.44% cov
      AM118098
      0.4% cov
    • Alignment Length
      17 bp
Occurrence
30 times in PatSeqDB
Tools
SEQ ID NO
2
Length
18
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130128
      NM_011510
      1 of 6 hits reported for Mus musculus.
    • Hit length
      4,952 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_011510
      0.36% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148368980
      NM_013039
      1 of 8 hits reported for Rattus norvegicus.
    • Hit length
      4,749 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NM_013039
      0.38% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Cricetus cricetus

    Cricetus cricetus

    • Public DB hit
      GI:1311521
      L40623
    • Hit length
      4,863 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      L40623
      0.37% cov
    • Alignment Length
      18 bp
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149641494
      XM_001508450
      1 of 2 hits reported for Ornithorhynchus anatinus.
    • Hit length
      4,764 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 2
      94.44% cov
      XM_001508450
      0.36% cov
    • Alignment Length
      17 bp
  • Atopobium parvulum DSM 20469

    Atopobium parvulum DSM 20469

    • Public DB hit
      GI:257472321
      CP001721
    • Hit length
      1,543,805 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 2
      94.44% cov
      CP001721
      0% cov
    • Alignment Length
      17 bp
  • Rhodobacter sphaeroides ATCC 17025

    Rhodobacter sphaeroides ATCC 17025

    • Public DB hit
      GI:145554299
      CP000661
    • Hit length
      3,217,726 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 2
      94.44% cov
      CP000661
      0% cov
    • Alignment Length
      17 bp
  • Marinobacter aquaeolei VT8

    Marinobacter aquaeolei VT8

    • Public DB hit
      GI:120322793
      CP000514
    • Hit length
      4,326,849 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 2
      94.44% cov
      CP000514
      0% cov
    • Alignment Length
      17 bp
  • Rat cytomegalovirus Maastricht

    Rat cytomegalovirus Maastricht

    • Public DB hit
      GI:20178619
      AF232689
    • Hit length
      230,138 bp
    • E Value
      4.14E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      94.44%
    • Alignment (schematic)

      SEQ ID NO 2
      94.44% cov
      AF232689
      0.01% cov
    • Alignment Length
      17 bp
Occurrence
30 times in PatSeqDB
Tools
SEQ ID NO
3
Length
48
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148368980
      NM_013039
      1 of 8 hits reported for Rattus norvegicus.
    • Hit length
      4,749 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_013039
      1.01% cov
    • Alignment Length
      48 bp
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130128
      NM_011510
      1 of 4 hits reported for Mus musculus.
    • Hit length
      4,952 bp
    • E Value
      2.66E-10
    • BLAST Score
      71.9 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_011510
      0.97% cov
    • Alignment Length
      48 bp
  • Cricetus cricetus

    Cricetus cricetus

    • Public DB hit
      GI:1311521
      L40623
    • Hit length
      4,863 bp
    • E Value
      2.66E-10
    • BLAST Score
      71.9 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      L40623
      0.99% cov
    • Alignment Length
      48 bp
Occurrence
33 times in PatSeqDB
Tools
SEQ ID NO
4
Length
48
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:210032370
      NG_008867
      1 of 12 hits reported for Homo sapiens.
    • Hit length
      91,018 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NG_008867
      0.05% cov
    • Alignment Length
      48 bp
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332836090
      XM_508310
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,960 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_508310
      0.97% cov
    • Alignment Length
      48 bp
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332211037
      XM_003254573
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      4,978 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003254573
      0.96% cov
    • Alignment Length
      48 bp
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297689186
      XM_002822013
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,094 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002822013
      1.55% cov
    • Alignment Length
      48 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297268319
      XM_002799621
      1 of 4 hits reported for Macaca mulatta.
    • Hit length
      4,875 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_002799621
      0.98% cov
    • Alignment Length
      48 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:189442451
      BC167829
    • Hit length
      4,807 bp
    • E Value
      1.83E-17
    • BLAST Score
      95.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BC167829
      1% cov
    • Alignment Length
      48 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194213880
      XM_001501642
    • Hit length
      4,726 bp
    • E Value
      1.09E-12
    • BLAST Score
      79.8 bits
    • Similarity
      100%
    • Coverage
      83.33%
    • Alignment (schematic)

      SEQ ID NO 4
      83.33% cov
      XM_001501642
      0.85% cov
    • Alignment Length
      40 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73988883
      XM_542520
    • Hit length
      4,632 bp
    • E Value
      1.09E-12
    • BLAST Score
      79.8 bits
    • Similarity
      100%
    • Coverage
      83.33%
    • Alignment (schematic)

      SEQ ID NO 4
      83.33% cov
      XM_542520
      0.86% cov
    • Alignment Length
      40 bp
Occurrence
14 times in PatSeqDB
Tools
SEQ ID NO
5
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194226813
      XM_001501126
      1 of 2 hits reported for Equus caballus.
    • Hit length
      705 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XM_001501126
      2.84% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:42476090
      NM_012578
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,887 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_012578
      1.06% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:85838505
      NM_008197
      1 of 15 hits reported for Mus musculus.
    • Hit length
      2,304 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_008197
      0.87% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:308818150
      NM_001197272
      1 of 2 hits reported for Xenopus laevis.
    • Hit length
      2,111 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_001197272
      0.95% cov
    • Alignment Length
      20 bp
Occurrence
38 times in PatSeqDB
Tools
SEQ ID NO
6
Length
17
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Pyrenophora tritici-repentis Pt-1C-BFP

    Pyrenophora tritici-repentis Pt-1C-BFP

    • Public DB hit
      GI:189206829
      XM_001939714
      1 of 2 hits reported for Pyrenophora tritici-repentis Pt-1C-BFP.
    • Hit length
      2,337 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001939714
      0.73% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Ajellomyces capsulatus NAm1

    Ajellomyces capsulatus NAm1

    • Public DB hit
      GI:154280474
      XM_001541000
      1 of 2 hits reported for Ajellomyces capsulatus NAm1.
    • Hit length
      1,737 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_001541000
      0.98% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:85838505
      NM_008197
      1 of 14 hits reported for Mus musculus.
    • Hit length
      2,304 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_008197
      0.74% cov
    • Alignment Length
      17 bp
    • CIGAR string
      17M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:308818150
      NM_001197272
      1 of 2 hits reported for Xenopus laevis.
    • Hit length
      2,111 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_001197272
      0.81% cov
    • Alignment Length
      17 bp
  • Sinorhizobium meliloti SM11

    Sinorhizobium meliloti SM11

    • Public DB hit
      GI:336031356
      CP001830
    • Hit length
      3,908,022 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP001830
      0% cov
    • Alignment Length
      17 bp
  • Sinorhizobium meliloti AK83

    Sinorhizobium meliloti AK83

    • Public DB hit
      GI:334093764
      CP002781
    • Hit length
      3,820,344 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002781
      0% cov
    • Alignment Length
      17 bp
  • Sinorhizobium meliloti BL225C

    Sinorhizobium meliloti BL225C

    • Public DB hit
      GI:333810283
      CP002740
    • Hit length
      3,671,982 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP002740
      0% cov
    • Alignment Length
      17 bp
  • Sinorhizobium meliloti 1021

    Sinorhizobium meliloti 1021

    • Public DB hit
      GI:30407155
      AL591688
    • Hit length
      3,654,135 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AL591688
      0% cov
    • Alignment Length
      17 bp
  • Ochrobactrum anthropi ATCC 49188

    Ochrobactrum anthropi ATCC 49188

    • Public DB hit
      GI:151559234
      CP000758
    • Hit length
      2,887,297 bp
    • E Value
      4.15E0
    • BLAST Score
      34.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      CP000758
      0% cov
    • Alignment Length
      17 bp
Occurrence
38 times in PatSeqDB
Tools
SEQ ID NO
7
Length
25
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:85838505
      NM_008197
      1 of 15 hits reported for Mus musculus.
    • Hit length
      2,304 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_008197
      1.09% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:308818150
      NM_001197272
      1 of 2 hits reported for Xenopus laevis.
    • Hit length
      2,111 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_001197272
      1.18% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301757491
      XM_002914540
    • Hit length
      890 bp
    • E Value
      8.25E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      96%
    • Alignment (schematic)

      SEQ ID NO 7
      96% cov
      XM_002914540
      2.7% cov
    • Alignment Length
      24 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:311255131
      XM_003126037
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      2,182 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_003126037
      1.15% cov
    • Alignment Length
      25 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:42476090
      NM_012578
    • Hit length
      1,887 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_012578
      1.32% cov
    • Alignment Length
      25 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73969711
      XM_847701
    • Hit length
      867 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XM_847701
      2.88% cov
    • Alignment Length
      25 bp
Occurrence
47 times in PatSeqDB
Tools
SEQ ID NO
8
Length
19
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Coprinopsis cinerea okayama7#130

    Coprinopsis cinerea okayama7#130

    • Public DB hit
      GI:299741035
      XM_001834115
      1 of 2 hits reported for Coprinopsis cinerea okayama7#130.
    • Hit length
      2,481 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_001834115
      0.77% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148368980
      NM_013039
      1 of 8 hits reported for Rattus norvegicus.
    • Hit length
      4,749 bp
    • E Value
      2.65E-1
    • BLAST Score
      38.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_013039
      0.4% cov
    • Alignment Length
      19 bp
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
38 times in PatSeqDB
Tools
SEQ ID NO
9
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148368980
      NM_013039
      1 of 8 hits reported for Rattus norvegicus.
    • Hit length
      4,749 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_013039
      0.42% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
22 times in PatSeqDB
Tools
SEQ ID NO
10
Length
25
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297482807
      XM_002693040
      1 of 4 hits reported for Bos taurus.
    • Hit length
      4,840 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002693040
      0.52% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:118130128
      NM_011510
      1 of 6 hits reported for Mus musculus.
    • Hit length
      4,952 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_011510
      0.5% cov
    • Alignment Length
      25 bp
    • CIGAR string
      25M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148368980
      NM_013039
      1 of 8 hits reported for Rattus norvegicus.
    • Hit length
      4,749 bp
    • E Value
      2.09E-4
    • BLAST Score
      50.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_013039
      0.53% cov
    • Alignment Length
      25 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335282171
      XM_003353938
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      3,111 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003353938
      0.8% cov
    • Alignment Length
      25 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332232559
      XM_003265424
    • Hit length
      6,772 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_003265424
      0.37% cov
    • Alignment Length
      25 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297261957
      XM_001098888
    • Hit length
      5,015 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001098888
      0.5% cov
    • Alignment Length
      25 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296217678
      XM_002807321
    • Hit length
      4,863 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002807321
      0.51% cov
    • Alignment Length
      25 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194213880
      XM_001501642
    • Hit length
      4,726 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001501642
      0.53% cov
    • Alignment Length
      25 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73988883
      XM_542520
    • Hit length
      4,632 bp
    • E Value
      5.09E-2
    • BLAST Score
      42.1 bits
    • Similarity
      96%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_542520
      0.54% cov
    • Alignment Length
      25 bp
Occurrence
38 times in PatSeqDB
Tools

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