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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
28 sequences found in this patent (in total)

Displaying 1 - 10 of 28 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
141
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:115312763
      AM295045
      1 of 23 hits reported for Streptococcus mutans.
    • Hit length
      141 bp
    • E Value
      8.5E-67
    • BLAST Score
      261.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM295045
      100% cov
    • Alignment Length
      141 bp
    • CIGAR string
      141M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans GS-5

    Streptococcus mutans GS-5

    • Public DB hit
      GI:90903952
      DQ403754
    • Hit length
      141 bp
    • E Value
      8.5E-67
    • BLAST Score
      261.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      DQ403754
      100% cov
    • Alignment Length
      141 bp
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24378526
      AE014133
    • Hit length
      2,030,921 bp
    • E Value
      8.5E-67
    • BLAST Score
      261.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AE014133
      0.01% cov
    • Alignment Length
      141 bp
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
46
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380265
      NP_722220
    • Hit length
      46 aa
    • E Value
      1.11E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_722220
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      46M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:12698428
      AAK01541
      1 of 8 hits reported for Streptococcus mutans.
    • Hit length
      46 aa
    • E Value
      4.35E-16
    • BLAST Score
      88.6 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAK01541
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      4MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579762
      YP_003484154
    • Hit length
      46 aa
    • E Value
      1.56E-15
    • BLAST Score
      86.7 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_003484154
      100% cov
    • Alignment Length
      46 aa
Occurrence
65 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,326
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24378526
      AE014133
    • Hit length
      2,030,921 bp
    • E Value
      0E0
    • BLAST Score
      2,449.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AE014133
      0.07% cov
    • Alignment Length
      1,326 bp
    • CIGAR string
      1326M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:254996425
      AP010655
    • Hit length
      2,013,587 bp
    • E Value
      0E0
    • BLAST Score
      2,283.6 bits
    • Similarity
      97.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AP010655
      0.07% cov
    • Alignment Length
      1,326 bp
    • CIGAR string
      164MN2MN18MN21MN119MN17MN63MN71MN43MN7MN298MN95MN23MN8MN17MN6MN10MN8MN23MN17MN8MN8MN3MN8MN4MN38MN14MN9MN135MN33MN6M mismatches: 30 - insertions: 0 - deletions: 0
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
441
Type
peptide
Locations
Drawings

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380266
      NP_722221
    • Hit length
      441 aa
    • E Value
      0E0
    • BLAST Score
      877.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_722221
      100% cov
    • Alignment Length
      441 aa
    • CIGAR string
      441M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579761
      YP_003484153
    • Hit length
      393 aa
    • E Value
      0E0
    • BLAST Score
      765.4 bits
    • Similarity
      97.96%
    • Coverage
      89.12%
    • Alignment (schematic)

      SEQ ID NO 4
      89.12% cov
      YP_003484153
      100% cov
    • Alignment Length
      393 aa
    • CIGAR string
      48H14MN6MN39MN5MN59MN2MN150MN5MN21MN3MN21MN44MN10MNM mismatches: 13 - insertions: 0 - deletions: 0
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
750
Type
nucleotide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24378526
      AE014133
    • Hit length
      2,030,921 bp
    • E Value
      0E0
    • BLAST Score
      1,386.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AE014133
      0.04% cov
    • Alignment Length
      750 bp
    • CIGAR string
      750M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:6681649
      AB016077
    • Hit length
      3,737 bp
    • E Value
      0E0
    • BLAST Score
      1,386.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AB016077
      20.07% cov
    • Alignment Length
      750 bp
    • CIGAR string
      750M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:254996425
      AP010655
    • Hit length
      2,013,587 bp
    • E Value
      0E0
    • BLAST Score
      1,352.9 bits
    • Similarity
      99.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AP010655
      0.04% cov
    • Alignment Length
      750 bp
    • CIGAR string
      137M2N18MN93MN121MN27MN348M mismatches: 6 - insertions: 0 - deletions: 0
  • Streptococcus mutans GS-5

    Streptococcus mutans GS-5

    • Public DB hit
      GI:1661198
      U75483
    • Hit length
      579 bp
    • E Value
      0E0
    • BLAST Score
      1,042.6 bits
    • Similarity
      99.14%
    • Coverage
      77.2%
    • Alignment (schematic)

      SEQ ID NO 5
      77.2% cov
      U75483
      100% cov
    • Alignment Length
      579 bp
Occurrence
10 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
250
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380267
      NP_722222
    • Hit length
      250 aa
    • E Value
      1.72E-145
    • BLAST Score
      520 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_722222
      100% cov
    • Alignment Length
      250 aa
    • CIGAR string
      250M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579760
      YP_003484152
    • Hit length
      250 aa
    • E Value
      1.11E-143
    • BLAST Score
      513.8 bits
    • Similarity
      99.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      YP_003484152
      100% cov
    • Alignment Length
      250 aa
    • CIGAR string
      46MN5MN71MN125M mismatches: 3 - insertions: 0 - deletions: 0
  • Streptococcus mutans GS-5

    Streptococcus mutans GS-5

    • Public DB hit
      GI:1661199
      AAB41200
    • Hit length
      193 aa
    • E Value
      1.99E-107
    • BLAST Score
      393.7 bits
    • Similarity
      98.96%
    • Coverage
      77.2%
    • Alignment (schematic)

      SEQ ID NO 6
      77.2% cov
      AAB41200
      100% cov
    • Alignment Length
      193 aa
    • CIGAR string
      52MN38MN32MN68M57H mismatches: 3 - insertions: 0 - deletions: 0
  • Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069

    Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069

    • Public DB hit
      GI:325977764
      YP_004287480
    • Hit length
      244 aa
    • E Value
      1.66E-77
    • BLAST Score
      294.3 bits
    • Similarity
      77.41%
    • Coverage
      95.6%
    • Alignment (schematic)

      SEQ ID NO 6
      95.6% cov
      YP_004287480
      97.54% cov
    • Alignment Length
      239 aa
  • Streptococcus cristatus ATCC 51100

    Streptococcus cristatus ATCC 51100

    • Public DB hit
      GI:322385671
      ZP_08059315
    • Hit length
      243 aa
    • E Value
      4.05E-77
    • BLAST Score
      292.7 bits
    • Similarity
      75.62%
    • Coverage
      96.8%
    • Alignment (schematic)

      SEQ ID NO 6
      96.8% cov
      ZP_08059315
      99.18% cov
    • Alignment Length
      242 aa
  • Streptococcus infantis SK1302

    Streptococcus infantis SK1302

    • Public DB hit
      GI:309800641
      ZP_07694784
    • Hit length
      247 aa
    • E Value
      7.69E-77
    • BLAST Score
      292 bits
    • Similarity
      76.57%
    • Coverage
      95.6%
    • Alignment (schematic)

      SEQ ID NO 6
      95.6% cov
      ZP_07694784
      96.36% cov
    • Alignment Length
      239 aa
  • Streptococcus gordonii str. Challis substr. CH1

    Streptococcus gordonii str. Challis substr. CH1

    • Public DB hit
      GI:157151586
      YP_001449692
    • Hit length
      244 aa
    • E Value
      1.29E-74
    • BLAST Score
      284.6 bits
    • Similarity
      76.45%
    • Coverage
      96%
    • Alignment (schematic)

      SEQ ID NO 6
      96% cov
      YP_001449692
      97.95% cov
    • Alignment Length
      242 aa
  • Streptococcus equi subsp. equi 4047

    Streptococcus equi subsp. equi 4047

    • Public DB hit
      GI:225870461
      YP_002746408
    • Hit length
      245 aa
    • E Value
      3.66E-74
    • BLAST Score
      283.1 bits
    • Similarity
      75.62%
    • Coverage
      96.8%
    • Alignment (schematic)

      SEQ ID NO 6
      96.8% cov
      YP_002746408
      98.37% cov
    • Alignment Length
      242 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
46
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:90903941
      ABE02365
      1 of 8 hits reported for Streptococcus mutans.
    • Hit length
      48 aa
    • E Value
      3.39E-17
    • BLAST Score
      92.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ABE02365
      95.83% cov
    • Alignment Length
      46 aa
    • CIGAR string
      46M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579762
      YP_003484154
    • Hit length
      46 aa
    • E Value
      1.18E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_003484154
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      12MN33M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380265
      NP_722220
    • Hit length
      46 aa
    • E Value
      4.35E-16
    • BLAST Score
      88.6 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_722220
      100% cov
    • Alignment Length
      46 aa
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
46
Type
peptide
Locations
Undetermined

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380265
      NP_722220
    • Hit length
      46 aa
    • E Value
      1.11E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_722220
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      46M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:12698428
      AAK01541
      1 of 8 hits reported for Streptococcus mutans.
    • Hit length
      46 aa
    • E Value
      4.35E-16
    • BLAST Score
      88.6 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAK01541
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      4MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579762
      YP_003484154
    • Hit length
      46 aa
    • E Value
      1.56E-15
    • BLAST Score
      86.7 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_003484154
      100% cov
    • Alignment Length
      46 aa
Occurrence
65 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
46
Type
peptide
Locations
Undetermined

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380265
      NP_722220
    • Hit length
      46 aa
    • E Value
      1.11E-16
    • BLAST Score
      90.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_722220
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      46M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:12698428
      AAK01541
      1 of 8 hits reported for Streptococcus mutans.
    • Hit length
      46 aa
    • E Value
      4.35E-16
    • BLAST Score
      88.6 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      AAK01541
      100% cov
    • Alignment Length
      46 aa
    • CIGAR string
      4MN41M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579762
      YP_003484154
    • Hit length
      46 aa
    • E Value
      1.56E-15
    • BLAST Score
      86.7 bits
    • Similarity
      97.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      YP_003484154
      100% cov
    • Alignment Length
      46 aa
Occurrence
65 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
43
Type
peptide
Locations
Undetermined

Declared organism:
Streptococcus mutans

Determined organism:
  • Streptococcus mutans

    Streptococcus mutans

    • Public DB hit
      GI:12698434
      AAK01544
      1 of 8 hits reported for Streptococcus mutans.
    • Hit length
      43 aa
    • E Value
      3.69E-15
    • BLAST Score
      85.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AAK01544
      100% cov
    • Alignment Length
      43 aa
    • CIGAR string
      43M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptococcus mutans UA159

    Streptococcus mutans UA159

    • Public DB hit
      GI:24380265
      NP_722220
    • Hit length
      46 aa
    • E Value
      8.63E-15
    • BLAST Score
      84.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_722220
      93.48% cov
    • Alignment Length
      43 aa
    • CIGAR string
      27MN15M mismatches: 1 - insertions: 0 - deletions: 0
  • Streptococcus mutans NN2025

    Streptococcus mutans NN2025

    • Public DB hit
      GI:290579762
      YP_003484154
    • Hit length
      46 aa
    • E Value
      1.27E-13
    • BLAST Score
      80.5 bits
    • Similarity
      97.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      YP_003484154
      93.48% cov
    • Alignment Length
      43 aa
Occurrence
11 times in PatSeqDB
Tools
PatSeq Finder

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