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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
63 sequences found in this patent (in total)

Displaying 1 - 10 of 63 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
4,298
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:297374806
      NM_007327
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      4,400 bp
    • E Value
      0E0
    • BLAST Score
      7,816.1 bits
    • Similarity
      99.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_007327
      97.84% cov
    • Alignment Length
      4,307 bp
    • CIGAR string
      11MN61MN24MN2882MN661MN39MN171MNMD20MN18MN74MN42MN5MN3MD174MIM8I97M mismatches: 12 - insertions: 9 - deletions: 2
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:162319231
      BC156097
      1 of 3 hits reported for synthetic construct.
    • Hit length
      2,878 bp
    • E Value
      0E0
    • BLAST Score
      5,197.6 bits
    • Similarity
      99.96%
    • Coverage
      65.54%
    • Alignment (schematic)

      SEQ ID NO 1
      65.54% cov
      BC156097
      97.88% cov
    • Alignment Length
      2,817 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:8393483
      NM_017010
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      4,213 bp
    • E Value
      0E0
    • BLAST Score
      4,603 bits
    • Similarity
      90.08%
    • Coverage
      82.88%
    • Alignment (schematic)

      SEQ ID NO 1
      82.88% cov
      NM_017010
      84.33% cov
    • Alignment Length
      3,577 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301781559
      XM_002926131
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,817 bp
    • E Value
      0E0
    • BLAST Score
      4,139.5 bits
    • Similarity
      93.19%
    • Coverage
      65.54%
    • Alignment (schematic)

      SEQ ID NO 1
      65.54% cov
      XM_002926131
      100% cov
    • Alignment Length
      2,821 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:294997255
      NM_008169
      1 of 2 hits reported for Mus musculus.
    • Hit length
      3,215 bp
    • E Value
      0E0
    • BLAST Score
      3,945.6 bits
    • Similarity
      90.54%
    • Coverage
      69.52%
    • Alignment (schematic)

      SEQ ID NO 1
      69.52% cov
      NM_008169
      92.75% cov
    • Alignment Length
      2,993 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
938
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:11038637
      NP_015566
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      938 aa
    • E Value
      0E0
    • BLAST Score
      1,962.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_015566
      100% cov
    • Alignment Length
      938 aa
    • CIGAR string
      938M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:8393484
      NP_058706
      1 of 4 hits reported for Rattus norvegicus.
    • Hit length
      938 aa
    • E Value
      0E0
    • BLAST Score
      1,952.6 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_058706
      100% cov
    • Alignment Length
      938 aa
    • CIGAR string
      4MN3MN7MN141MN52MN54MN147MN523M mismatches: 7 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:6680095
      NP_032195
      1 of 3 hits reported for Mus musculus.
    • Hit length
      938 aa
    • E Value
      0E0
    • BLAST Score
      1,950.6 bits
    • Similarity
      99.68%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_032195
      100% cov
    • Alignment Length
      938 aa
    • CIGAR string
      4MN3MN7MN141MN52M2N53MN147MN44MN478M mismatches: 9 - insertions: 0 - deletions: 0
  • Rattus rattus

    Rattus rattus

    • Public DB hit
      GI:228224
      1718345A
    • Hit length
      938 aa
    • E Value
      0E0
    • BLAST Score
      1,950.3 bits
    • Similarity
      99.57%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      1718345A
      100% cov
    • Alignment Length
      938 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301781560
      XP_002926177
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      938 aa
    • E Value
      0E0
    • BLAST Score
      1,937.2 bits
    • Similarity
      99.15%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002926177
      100% cov
    • Alignment Length
      938 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:56790282
      NP_001008717
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      922 aa
    • E Value
      0E0
    • BLAST Score
      1,879.8 bits
    • Similarity
      99.89%
    • Coverage
      95.95%
    • Alignment (schematic)

      SEQ ID NO 2
      95.95% cov
      NP_001008717
      97.61% cov
    • Alignment Length
      900 aa
Occurrence
128 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
63
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:224809340
      NG_011507
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      36,600 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NG_011507
      0.17% cov
    • Alignment Length
      63 bp
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332833436
      XM_520645
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,657 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_520645
      2.37% cov
    • Alignment Length
      63 bp
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332261650
      XM_003279833
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,455 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_003279833
      1.82% cov
    • Alignment Length
      63 bp
    • CIGAR string
      63M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301781553
      XM_002926128
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,721 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_002926128
      2.32% cov
    • Alignment Length
      63 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297685807
      XR_094283
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,811 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_094283
      2.24% cov
    • Alignment Length
      63 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297269803
      XM_001117773
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,532 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XM_001117773
      1.78% cov
    • Alignment Length
      63 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296191233
      XR_086953
      1 of 2 hits reported for Callithrix jacchus.
    • Hit length
      3,072 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XR_086953
      2.05% cov
    • Alignment Length
      63 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:294997256
      NM_001177656
      1 of 3 hits reported for Mus musculus.
    • Hit length
      3,898 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001177656
      1.62% cov
    • Alignment Length
      63 bp
  • Zalophus californianus

    Zalophus californianus

    • Public DB hit
      GI:299007025
      GU566741
    • Hit length
      1,354 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      GU566741
      4.65% cov
    • Alignment Length
      63 bp
  • Cavia porcellus

    Cavia porcellus

    • Public DB hit
      GI:224466269
      FJ236322
    • Hit length
      665 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      FJ236322
      9.47% cov
    • Alignment Length
      63 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:24209926
      AY157515
    • Hit length
      14,641 bp
    • E Value
      6.02E-24
    • BLAST Score
      117.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AY157515
      0.43% cov
    • Alignment Length
      63 bp
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
21
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:154800424
      NP_001081615
      1 of 4 hits reported for Xenopus laevis.
    • Hit length
      904 aa
    • E Value
      3.5E-4
    • BLAST Score
      48.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001081615
      2.32% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301781554
      XP_002926174
    • Hit length
      906 aa
    • E Value
      3.81E-4
    • BLAST Score
      48.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002926174
      2.32% cov
    • Alignment Length
      21 aa
    • CIGAR string
      21M mismatches: 0 - insertions: 0 - deletions: 0
  • Gallus gallus

    Gallus gallus

    • Public DB hit
      GI:68164778
      AAY87407
      1 of 2 hits reported for Gallus gallus.
    • Hit length
      888 aa
    • E Value
      3.84E-4
    • BLAST Score
      48.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAY87407
      2.36% cov
    • Alignment Length
      21 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:294997257
      NP_001171127
      1 of 2 hits reported for Mus musculus.
    • Hit length
      906 aa
    • E Value
      4.14E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001171127
      2.32% cov
    • Alignment Length
      21 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:475568
      AAB50933
      1 of 2 hits reported for Rattus norvegicus.
    • Hit length
      906 aa
    • E Value
      4.14E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAB50933
      2.32% cov
    • Alignment Length
      21 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:297374811
      NP_001172020
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      906 aa
    • E Value
      4.21E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001172020
      2.32% cov
    • Alignment Length
      21 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109109727
      XP_001117773
    • Hit length
      867 aa
    • E Value
      4.93E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001117773
      2.42% cov
    • Alignment Length
      21 aa
  • Meleagris gallopavo

    Meleagris gallopavo

    • Public DB hit
      GI:326930178
      XP_003211228
    • Hit length
      925 aa
    • E Value
      5.06E-4
    • BLAST Score
      48.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003211228
      2.27% cov
    • Alignment Length
      21 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334312093
      XP_001375016
    • Hit length
      947 aa
    • E Value
      6.02E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001375016
      2.22% cov
    • Alignment Length
      21 aa
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
4,068
Type
nucleotide
Locations
Claims, Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2444023
      U77782
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      4,340 bp
    • E Value
      0E0
    • BLAST Score
      7,406.2 bits
    • Similarity
      99.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      U77782
      93.69% cov
    • Alignment Length
      4,068 bp
    • CIGAR string
      17MN312MN462MN4MN1314MN520MN240MN43MN478MN29MN244MN37MN24MN23MN215MNMN2MD31MN45MD8M mismatches: 17 - insertions: 0 - deletions: 2
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701725
      XM_002827809
    • Hit length
      3,717 bp
    • E Value
      0E0
    • BLAST Score
      6,226.2 bits
    • Similarity
      97.04%
    • Coverage
      90.73%
    • Alignment (schematic)

      SEQ ID NO 5
      90.73% cov
      XM_002827809
      99.78% cov
    • Alignment Length
      3,713 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296203124
      XM_002806869
    • Hit length
      3,735 bp
    • E Value
      0E0
    • BLAST Score
      5,635.2 bits
    • Similarity
      94.01%
    • Coverage
      91.22%
    • Alignment (schematic)

      SEQ ID NO 5
      91.22% cov
      XM_002806869
      100% cov
    • Alignment Length
      3,742 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332266197
      XM_003282052
    • Hit length
      3,438 bp
    • E Value
      0E0
    • BLAST Score
      5,005.5 bits
    • Similarity
      97.38%
    • Coverage
      72.25%
    • Alignment (schematic)

      SEQ ID NO 5
      72.25% cov
      XM_003282052
      85.57% cov
    • Alignment Length
      2,944 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297273562
      XM_002800617
    • Hit length
      3,291 bp
    • E Value
      0E0
    • BLAST Score
      4,730.4 bits
    • Similarity
      96.27%
    • Coverage
      70.7%
    • Alignment (schematic)

      SEQ ID NO 5
      70.7% cov
      XM_002800617
      87.94% cov
    • Alignment Length
      2,895 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:332634683
      NM_001206894
    • Hit length
      3,835 bp
    • E Value
      0E0
    • BLAST Score
      4,427.5 bits
    • Similarity
      87.89%
    • Coverage
      93.81%
    • Alignment (schematic)

      SEQ ID NO 5
      93.81% cov
      NM_001206894
      98.88% cov
    • Alignment Length
      3,874 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:148747562
      NM_012575
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      4,388 bp
    • E Value
      0E0
    • BLAST Score
      3,936.3 bits
    • Similarity
      85.27%
    • Coverage
      95.06%
    • Alignment (schematic)

      SEQ ID NO 5
      95.06% cov
      NM_012575
      88.2% cov
    • Alignment Length
      3,932 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73965061
      XM_540421
    • Hit length
      3,246 bp
    • E Value
      0E0
    • BLAST Score
      3,917.9 bits
    • Similarity
      91.8%
    • Coverage
      69.17%
    • Alignment (schematic)

      SEQ ID NO 5
      69.17% cov
      XM_540421
      86.88% cov
    • Alignment Length
      2,830 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:75709201
      NM_010350
      1 of 2 hits reported for Mus musculus.
    • Hit length
      4,895 bp
    • E Value
      0E0
    • BLAST Score
      3,814.5 bits
    • Similarity
      84.7%
    • Coverage
      95.13%
    • Alignment (schematic)

      SEQ ID NO 5
      95.13% cov
      NM_010350
      79.22% cov
    • Alignment Length
      3,940 bp
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
1,236
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2444024
      AAB71624
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      1,236 aa
    • E Value
      0E0
    • BLAST Score
      2,504.6 bits
    • Similarity
      99.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAB71624
      100% cov
    • Alignment Length
      1,236 aa
    • CIGAR string
      47MN155MN437MN173MN79MN14MN159MN9MN80MN12MN15MN45M mismatches: 11 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297701726
      XP_002827855
    • Hit length
      1,238 aa
    • E Value
      0E0
    • BLAST Score
      2,300.4 bits
    • Similarity
      96.53%
    • Coverage
      99.68%
    • Alignment (schematic)

      SEQ ID NO 6
      99.68% cov
      XP_002827855
      100% cov
    • Alignment Length
      1,238 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:256997178
      BAI22782
    • Hit length
      1,215 aa
    • E Value
      0E0
    • BLAST Score
      2,277.3 bits
    • Similarity
      95.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BAI22782
      100% cov
    • Alignment Length
      1,242 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296203125
      XP_002806915
    • Hit length
      1,244 aa
    • E Value
      0E0
    • BLAST Score
      2,187.5 bits
    • Similarity
      95.64%
    • Coverage
      97.65%
    • Alignment (schematic)

      SEQ ID NO 6
      97.65% cov
      XP_002806915
      97.67% cov
    • Alignment Length
      1,215 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:75709202
      NP_034480
      1 of 2 hits reported for Mus musculus.
    • Hit length
      1,239 aa
    • E Value
      0E0
    • BLAST Score
      2,133.6 bits
    • Similarity
      90.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_034480
      100% cov
    • Alignment Length
      1,246 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:475550
      AAA17832
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      1,250 aa
    • E Value
      0E0
    • BLAST Score
      2,114 bits
    • Similarity
      90.19%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAA17832
      98.96% cov
    • Alignment Length
      1,244 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:332634684
      NP_001193823
    • Hit length
      1,228 aa
    • E Value
      0E0
    • BLAST Score
      2,103.6 bits
    • Similarity
      90.18%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_001193823
      100% cov
    • Alignment Length
      1,242 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194216687
      XP_001916896
    • Hit length
      1,198 aa
    • E Value
      0E0
    • BLAST Score
      2,077.4 bits
    • Similarity
      88.65%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001916896
      100% cov
    • Alignment Length
      1,242 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332266198
      XP_003282100
    • Hit length
      1,145 aa
    • E Value
      0E0
    • BLAST Score
      1,832.4 bits
    • Similarity
      97.35%
    • Coverage
      79.29%
    • Alignment (schematic)

      SEQ ID NO 6
      79.29% cov
      XP_003282100
      85.68% cov
    • Alignment Length
      981 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334322930
      XP_001378152
    • Hit length
      1,270 aa
    • E Value
      0E0
    • BLAST Score
      1,790.8 bits
    • Similarity
      81.67%
    • Coverage
      98.62%
    • Alignment (schematic)

      SEQ ID NO 6
      98.62% cov
      XP_001378152
      98.66% cov
    • Alignment Length
      1,255 aa
Occurrence
19 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:256997177
      AB514216
    • Hit length
      14,177 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AB514216
      0.17% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:26801282
      AC068874
    • Hit length
      174,914 bp
    • E Value
      6.88E-4
    • BLAST Score
      48.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AC068874
      0.01% cov
    • Alignment Length
      24 bp
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
7
Type
peptide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
  • Streptomyces scabiei 87.22

    Streptomyces scabiei 87.22

    • Public DB hit
      GI:290957053
      YP_003488235
      1 of 2 hits reported for Streptomyces scabiei 87.22.
    • Hit length
      472 aa
    • E Value
      1.42E3
    • BLAST Score
      25.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_003488235
      1.48% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Streptomyces sviceus ATCC 29083

    Streptomyces sviceus ATCC 29083

    • Public DB hit
      GI:297202699
      ZP_06920096
      1 of 2 hits reported for Streptomyces sviceus ATCC 29083.
    • Hit length
      467 aa
    • E Value
      1.42E3
    • BLAST Score
      25.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_06920096
      1.5% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Alcanivorax sp. DG881

    Alcanivorax sp. DG881

    • Public DB hit
      GI:254430014
      ZP_05043721
      1 of 2 hits reported for Alcanivorax sp. DG881.
    • Hit length
      450 aa
    • E Value
      1.42E3
    • BLAST Score
      25.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_05043721
      1.56% cov
    • Alignment Length
      7 aa
    • CIGAR string
      7M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila grimshawi

    Drosophila grimshawi

    • Public DB hit
      GI:195053169
      XP_001993499
    • Hit length
      787 aa
    • E Value
      2.05E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001993499
      0.89% cov
    • Alignment Length
      7 aa
  • Streptomyces avermitilis MA-4680 = NBRC 14893

    Streptomyces avermitilis MA-4680 = NBRC 14893

    • Public DB hit
      GI:29829128
      NP_823762
    • Hit length
      511 aa
    • E Value
      3.25E3
    • BLAST Score
      24 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_823762
      1.37% cov
    • Alignment Length
      7 aa
  • Magnetospirillum magneticum AMB-1

    Magnetospirillum magneticum AMB-1

    • Public DB hit
      GI:83311802
      YP_422066
    • Hit length
      399 aa
    • E Value
      3.7E3
    • BLAST Score
      24 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_422066
      1.75% cov
    • Alignment Length
      7 aa
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301611264
      XP_002935152
    • Hit length
      372 aa
    • E Value
      6.53E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002935152
      1.88% cov
    • Alignment Length
      7 aa
  • Streptomyces lividans TK24

    Streptomyces lividans TK24

    • Public DB hit
      GI:289768795
      ZP_06528173
      1 of 2 hits reported for Streptomyces lividans TK24.
    • Hit length
      470 aa
    • E Value
      6.53E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_06528173
      1.49% cov
    • Alignment Length
      7 aa
  • Methanocella paludicola SANAE

    Methanocella paludicola SANAE

    • Public DB hit
      GI:282163970
      YP_003356355
    • Hit length
      293 aa
    • E Value
      7.57E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_003356355
      2.39% cov
    • Alignment Length
      7 aa
  • Streptomyces viridochromogenes DSM 40736

    Streptomyces viridochromogenes DSM 40736

    • Public DB hit
      GI:302554493
      ZP_07306835
    • Hit length
      472 aa
    • E Value
      8.37E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ZP_07306835
      1.48% cov
    • Alignment Length
      7 aa
Occurrence
20 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
11
Type
nucleotide
Locations
Detailed Description

Declared organism:
Not specified

Determined organism:
Occurrence
14 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
4,808
Type
nucleotide
Locations
Claims, Detailed Description

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:1899199
      U90277
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      4,808 bp
    • E Value
      0E0
    • BLAST Score
      8,846.6 bits
    • Similarity
      99.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      U90277
      100% cov
    • Alignment Length
      4,808 bp
    • CIGAR string
      2030M2N5MN2MN4MN2629MN132M mismatches: 6 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332240275
      XM_003269267
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      14,433 bp
    • E Value
      0E0
    • BLAST Score
      8,442.2 bits
    • Similarity
      98.38%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 10
      99.94% cov
      XM_003269267
      33.29% cov
    • Alignment Length
      4,805 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168277761
      AB385003
      1 of 2 hits reported for synthetic construct.
    • Hit length
      4,409 bp
    • E Value
      0E0
    • BLAST Score
      8,050.7 bits
    • Similarity
      99.75%
    • Coverage
      91.35%
    • Alignment (schematic)

      SEQ ID NO 10
      91.35% cov
      AB385003
      99.61% cov
    • Alignment Length
      4,392 bp
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:77736528
      NM_001034189
    • Hit length
      4,395 bp
    • E Value
      0E0
    • BLAST Score
      7,962 bits
    • Similarity
      99.36%
    • Coverage
      91.41%
    • Alignment (schematic)

      SEQ ID NO 10
      91.41% cov
      NM_001034189
      100% cov
    • Alignment Length
      4,395 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297698069
      XM_002826109
    • Hit length
      13,865 bp
    • E Value
      0E0
    • BLAST Score
      7,282.5 bits
    • Similarity
      98.85%
    • Coverage
      84.94%
    • Alignment (schematic)

      SEQ ID NO 10
      84.94% cov
      XM_002826109
      29.46% cov
    • Alignment Length
      4,084 bp
  • Saimiri boliviensis

    Saimiri boliviensis

    • Public DB hit
      GI:56122249
      AY665238
    • Hit length
      4,167 bp
    • E Value
      0E0
    • BLAST Score
      6,887.3 bits
    • Similarity
      96.5%
    • Coverage
      86.67%
    • Alignment (schematic)

      SEQ ID NO 10
      86.67% cov
      AY665238
      100% cov
    • Alignment Length
      4,168 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73959180
      XM_547132
    • Hit length
      5,184 bp
    • E Value
      0E0
    • BLAST Score
      6,314.8 bits
    • Similarity
      90.47%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 10
      99.71% cov
      XM_547132
      92.46% cov
    • Alignment Length
      4,806 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296219551
      XM_002755882
    • Hit length
      5,006 bp
    • E Value
      0E0
    • BLAST Score
      6,246.5 bits
    • Similarity
      96.36%
    • Coverage
      78.95%
    • Alignment (schematic)

      SEQ ID NO 10
      78.95% cov
      XM_002755882
      75.83% cov
    • Alignment Length
      3,796 bp
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder

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