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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
5 sequences found in this patent (in total)

Displaying 5 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
68
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:281346427
      EFB22011
    • Hit length
      535 aa
    • E Value
      1.88E-32
    • BLAST Score
      142.9 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EFB22011
      12.71% cov
    • Alignment Length
      68 aa
    • CIGAR string
      5MN37MN24M mismatches: 2 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244134
      XP_003271227
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      119 aa
    • E Value
      7.4E-32
    • BLAST Score
      141 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003271227
      57.14% cov
    • Alignment Length
      68 aa
    • CIGAR string
      5MN62M mismatches: 1 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:76563933
      NP_001029058
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      119 aa
    • E Value
      8.39E-32
    • BLAST Score
      141 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001029058
      57.14% cov
    • Alignment Length
      68 aa
    • CIGAR string
      5MN62M mismatches: 1 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278353
      BAG11056
    • Hit length
      137 aa
    • E Value
      9.05E-32
    • BLAST Score
      140.6 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAG11056
      49.64% cov
    • Alignment Length
      68 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:57528015
      NP_001009580
    • Hit length
      116 aa
    • E Value
      1.14E-31
    • BLAST Score
      140.6 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001009580
      58.62% cov
    • Alignment Length
      68 aa
  • Felis catus

    Felis catus

    • Public DB hit
      GI:57619014
      NP_001009847
      1 of 2 hits reported for Felis catus.
    • Hit length
      93 aa
    • E Value
      2.65E-31
    • BLAST Score
      139 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001009847
      73.12% cov
    • Alignment Length
      68 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:74136417
      NP_001028106
    • Hit length
      89 aa
    • E Value
      2.89E-31
    • BLAST Score
      139 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001028106
      76.4% cov
    • Alignment Length
      68 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148667157
      EDK99573
      1 of 2 hits reported for Mus musculus.
    • Hit length
      142 aa
    • E Value
      4.8E-31
    • BLAST Score
      138.3 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EDK99573
      47.89% cov
    • Alignment Length
      68 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102118
      NP_001126092
    • Hit length
      93 aa
    • E Value
      6.54E-31
    • BLAST Score
      137.9 bits
    • Similarity
      98.53%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_001126092
      73.12% cov
    • Alignment Length
      68 aa
Occurrence
56 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
89
Type
peptide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:76563933
      NP_001029058
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      119 aa
    • E Value
      1.37E-44
    • BLAST Score
      183.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001029058
      74.79% cov
    • Alignment Length
      89 aa
    • CIGAR string
      89M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278353
      BAG11056
    • Hit length
      137 aa
    • E Value
      2.12E-44
    • BLAST Score
      182.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAG11056
      64.96% cov
    • Alignment Length
      89 aa
    • CIGAR string
      89M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332244134
      XP_003271227
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      119 aa
    • E Value
      3.71E-44
    • BLAST Score
      181.8 bits
    • Similarity
      98.88%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003271227
      74.79% cov
    • Alignment Length
      89 aa
    • CIGAR string
      9MN79M mismatches: 1 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102118
      NP_001126092
    • Hit length
      93 aa
    • E Value
      2.84E-42
    • BLAST Score
      175.6 bits
    • Similarity
      97.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001126092
      95.7% cov
    • Alignment Length
      89 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:189339264
      NP_001121569
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      93 aa
    • E Value
      3.68E-41
    • BLAST Score
      171.8 bits
    • Similarity
      95.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001121569
      95.7% cov
    • Alignment Length
      89 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:57528015
      NP_001009580
    • Hit length
      116 aa
    • E Value
      7.8E-41
    • BLAST Score
      171 bits
    • Similarity
      94.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001009580
      76.72% cov
    • Alignment Length
      89 aa
Occurrence
438 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
89
Type
peptide
Locations
Detailed Description

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:76563910
      NP_001029055
      1 of 3 hits reported for Rattus norvegicus.
    • Hit length
      119 aa
    • E Value
      7.23E-45
    • BLAST Score
      184.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001029055
      74.79% cov
    • Alignment Length
      89 aa
    • CIGAR string
      89M mismatches: 0 - insertions: 0 - deletions: 0
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:57528015
      NP_001009580
    • Hit length
      116 aa
    • E Value
      4.69E-41
    • BLAST Score
      171.8 bits
    • Similarity
      95.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001009580
      76.72% cov
    • Alignment Length
      89 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102118
      NP_001126092
    • Hit length
      93 aa
    • E Value
      1.27E-40
    • BLAST Score
      170.2 bits
    • Similarity
      97.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001126092
      95.7% cov
    • Alignment Length
      89 aa
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:163915359
      NP_001106645
    • Hit length
      89 aa
    • E Value
      2.7E-40
    • BLAST Score
      169.1 bits
    • Similarity
      95.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001106645
      100% cov
    • Alignment Length
      89 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:189339264
      NP_001121569
      1 of 2 hits reported for Canis lupus familiaris.
    • Hit length
      93 aa
    • E Value
      5.1E-39
    • BLAST Score
      164.9 bits
    • Similarity
      94.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001121569
      95.7% cov
    • Alignment Length
      89 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:168278353
      BAG11056
    • Hit length
      137 aa
    • E Value
      2.33E-37
    • BLAST Score
      159.5 bits
    • Similarity
      96.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAG11056
      64.96% cov
    • Alignment Length
      89 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:76563933
      NP_001029058
      1 of 5 hits reported for Homo sapiens.
    • Hit length
      119 aa
    • E Value
      6.03E-37
    • BLAST Score
      157.9 bits
    • Similarity
      96.63%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001029058
      74.79% cov
    • Alignment Length
      89 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:148667157
      EDK99573
    • Hit length
      142 aa
    • E Value
      2.06E-36
    • BLAST Score
      156 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EDK99573
      62.68% cov
    • Alignment Length
      89 aa
Occurrence
67 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
1,940
Type
nucleotide
Locations
Detailed Description

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:291045298
      NM_199168
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,940 bp
    • E Value
      0E0
    • BLAST Score
      3,583.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_199168
      100% cov
    • Alignment Length
      1,940 bp
    • CIGAR string
      1940M mismatches: 0 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:154240762
      AC202607
    • Hit length
      193,054 bp
    • E Value
      0E0
    • BLAST Score
      2,652.9 bits
    • Similarity
      95.55%
    • Coverage
      85.57%
    • Alignment (schematic)

      SEQ ID NO 4
      85.57% cov
      AC202607
      0.86% cov
    • Alignment Length
      1,663 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:115554351
      AK240146
    • Hit length
      1,865 bp
    • E Value
      0E0
    • BLAST Score
      1,478.4 bits
    • Similarity
      82.38%
    • Coverage
      91.03%
    • Alignment (schematic)

      SEQ ID NO 4
      91.03% cov
      AK240146
      94.75% cov
    • Alignment Length
      1,827 bp
Occurrence
103 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
293
Type
nucleotide
Locations
Detailed Description

Declared organism:
Rattus norvegicus

Determined organism:
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:12003259
      AF209976
      1 of 9 hits reported for Rattus norvegicus.
    • Hit length
      1,830 bp
    • E Value
      6.43E-151
    • BLAST Score
      542.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AF209976
      16.01% cov
    • Alignment Length
      293 bp
    • CIGAR string
      293M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:270309137
      NM_021704
      1 of 13 hits reported for Mus musculus.
    • Hit length
      1,878 bp
    • E Value
      3.08E-129
    • BLAST Score
      470.2 bits
    • Similarity
      95.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_021704
      15.6% cov
    • Alignment Length
      294 bp
    • CIGAR string
      22MN44MN18MN13MN5MN8M2N19MN48MN7MI2MD57MN5MN33M mismatches: 11 - insertions: 1 - deletions: 1
  • Mus sp.

    Mus sp.

    • Public DB hit
      GI:786393
      S74318
    • Hit length
      1,841 bp
    • E Value
      3.08E-129
    • BLAST Score
      470.2 bits
    • Similarity
      95.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      S74318
      15.92% cov
    • Alignment Length
      294 bp
    • CIGAR string
      22MN44MN18MN13MN5MN8M2N19MN48MN7MI2MD57MN5MN33M mismatches: 11 - insertions: 1 - deletions: 1
Occurrence
57 times in PatSeqDB
Tools
PatSeq Finder

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