Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank EMBL-EBI Pat USPTO Fulltext
23 sequences found in this patent (in total)

Displaying 1 - 10 of 23 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
930
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:406988
      U02314
      1 of 23 hits reported for Neisseria meningitidis.
    • Hit length
      930 bp
    • E Value
      0E0
    • BLAST Score
      1,718.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U02314
      100% cov
    • Alignment Length
      930 bp
    • CIGAR string
      930M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis H44/76

    Neisseria meningitidis H44/76

    • Public DB hit
      GI:325199235
      CP002420
    • Hit length
      2,240,883 bp
    • E Value
      0E0
    • BLAST Score
      1,683.4 bits
    • Similarity
      99.35%
    • Coverage
      99.89%
    • Alignment (schematic)

      SEQ ID NO 1
      99.89% cov
      CP002420
      0.04% cov
    • Alignment Length
      929 bp
    • CIGAR string
      1H7MN2MN2MN5MN887MN8MN12M mismatches: 6 - insertions: 0 - deletions: 0
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:66731897
      AE002098
    • Hit length
      2,272,360 bp
    • E Value
      0E0
    • BLAST Score
      1,683.4 bits
    • Similarity
      99.35%
    • Coverage
      99.89%
    • Alignment (schematic)

      SEQ ID NO 1
      99.89% cov
      AE002098
      0.04% cov
    • Alignment Length
      929 bp
    • CIGAR string
      1H7MN2MN2MN5MN887MN8MN12M mismatches: 6 - insertions: 0 - deletions: 0
Occurrence
46 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
309
Type
peptide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis MC58

    Neisseria meningitidis MC58

    • Public DB hit
      GI:15677862
      NP_275030
    • Hit length
      331 aa
    • E Value
      1.92E-178
    • BLAST Score
      629.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_275030
      93.35% cov
    • Alignment Length
      309 aa
    • CIGAR string
      309M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:406989
      AAA03392
      1 of 22 hits reported for Neisseria meningitidis.
    • Hit length
      309 aa
    • E Value
      7.87E-178
    • BLAST Score
      627.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAA03392
      100% cov
    • Alignment Length
      309 aa
    • CIGAR string
      309M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis serogroup B

    Neisseria meningitidis serogroup B

    • Public DB hit
      GI:266697
      P30689
    • Hit length
      331 aa
    • E Value
      2.06E-163
    • BLAST Score
      580.1 bits
    • Similarity
      94.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      P30689
      93.35% cov
    • Alignment Length
      309 aa
Occurrence
61 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,029
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      0E0
    • BLAST Score
      1,895.8 bits
    • Similarity
      100%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 3
      99.71% cov
      AM421808
      0.05% cov
    • Alignment Length
      1,026 bp
    • CIGAR string
      3H1026M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:39726077
      AY465901
      1 of 22 hits reported for Neisseria meningitidis.
    • Hit length
      966 bp
    • E Value
      0E0
    • BLAST Score
      1,785 bits
    • Similarity
      100%
    • Coverage
      93.88%
    • Alignment (schematic)

      SEQ ID NO 3
      93.88% cov
      AY465901
      100% cov
    • Alignment Length
      966 bp
    • CIGAR string
      39H966M24H mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis serogroup C

    Neisseria meningitidis serogroup C

    • Public DB hit
      GI:37623925
      AY394653
    • Hit length
      969 bp
    • E Value
      0E0
    • BLAST Score
      1,742.5 bits
    • Similarity
      99.17%
    • Coverage
      93.88%
    • Alignment (schematic)

      SEQ ID NO 3
      93.88% cov
      AY394653
      100% cov
    • Alignment Length
      969 bp
    • CIGAR string
      39H700MN13MNMIM2I80MN33MN6MN127M24H mismatches: 5 - insertions: 3 - deletions: 0
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      95.93%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 3
      99.71% cov
      FM999788
      0.05% cov
    • Alignment Length
      1,032 bp
    • CIGAR string
      3H566MN26MNIMDMN7MN12M2N4MN2M2N15MN92MI3M2NDMNMNMNI5MD78MN27M2N5MIMD3M2N3MN81MN4MN7M4NI4MNMD3MN19MD2MIMN14M mismatches: 30 - insertions: 6 - deletions: 6
Occurrence
46 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
342
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121635698
      YP_975943
    • Hit length
      404 aa
    • E Value
      0E0
    • BLAST Score
      695.3 bits
    • Similarity
      100%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      YP_975943
      84.41% cov
    • Alignment Length
      341 aa
    • CIGAR string
      1H341M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis M6190

    Neisseria meningitidis M6190

    • Public DB hit
      GI:325131282
      EGC53993
    • Hit length
      360 aa
    • E Value
      0E0
    • BLAST Score
      693 bits
    • Similarity
      100%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      EGC53993
      94.72% cov
    • Alignment Length
      341 aa
    • CIGAR string
      1H341M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:293651786
      3A2R_X
      1 of 17 hits reported for Neisseria meningitidis.
    • Hit length
      355 aa
    • E Value
      0E0
    • BLAST Score
      688.3 bits
    • Similarity
      99.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      3A2R_X
      96.34% cov
    • Alignment Length
      342 aa
    • CIGAR string
      2N248MN91M mismatches: 3 - insertions: 0 - deletions: 0
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325199131
      ADY94587
    • Hit length
      361 aa
    • E Value
      0E0
    • BLAST Score
      662.1 bits
    • Similarity
      97.08%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      ADY94587
      94.74% cov
    • Alignment Length
      343 aa
  • Neisseria meningitidis 961-5945

    Neisseria meningitidis 961-5945

    • Public DB hit
      GI:325141399
      EGC63878
    • Hit length
      361 aa
    • E Value
      0E0
    • BLAST Score
      657.9 bits
    • Similarity
      96.79%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      EGC63878
      94.74% cov
    • Alignment Length
      343 aa
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261393364
      CAX51000
    • Hit length
      360 aa
    • E Value
      0E0
    • BLAST Score
      647.5 bits
    • Similarity
      95.6%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      CAX51000
      94.72% cov
    • Alignment Length
      341 aa
  • Neisseria meningitidis serogroup C

    Neisseria meningitidis serogroup C

    • Public DB hit
      GI:37623926
      AAQ95603
    • Hit length
      323 aa
    • E Value
      0E0
    • BLAST Score
      637.9 bits
    • Similarity
      99.07%
    • Coverage
      94.15%
    • Alignment (schematic)

      SEQ ID NO 4
      94.15% cov
      AAQ95603
      100% cov
    • Alignment Length
      323 aa
  • Neisseria meningitidis N1568

    Neisseria meningitidis N1568

    • Public DB hit
      GI:325127318
      EGC50253
    • Hit length
      358 aa
    • E Value
      3.51E-178
    • BLAST Score
      629.4 bits
    • Similarity
      93.84%
    • Coverage
      99.71%
    • Alignment (schematic)

      SEQ ID NO 4
      99.71% cov
      EGC50253
      94.69% cov
    • Alignment Length
      341 aa
Occurrence
31 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,092
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:120865607
      AM421808
    • Hit length
      2,194,961 bp
    • E Value
      0E0
    • BLAST Score
      1,895.8 bits
    • Similarity
      100%
    • Coverage
      93.96%
    • Alignment (schematic)

      SEQ ID NO 5
      93.96% cov
      AM421808
      0.05% cov
    • Alignment Length
      1,026 bp
    • CIGAR string
      66H1026M mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:39726077
      AY465901
      1 of 22 hits reported for Neisseria meningitidis.
    • Hit length
      966 bp
    • E Value
      0E0
    • BLAST Score
      1,785 bits
    • Similarity
      100%
    • Coverage
      88.46%
    • Alignment (schematic)

      SEQ ID NO 5
      88.46% cov
      AY465901
      100% cov
    • Alignment Length
      966 bp
    • CIGAR string
      102H966M24H mismatches: 0 - insertions: 0 - deletions: 0
  • Neisseria meningitidis serogroup C

    Neisseria meningitidis serogroup C

    • Public DB hit
      GI:37623925
      AY394653
    • Hit length
      969 bp
    • E Value
      0E0
    • BLAST Score
      1,742.5 bits
    • Similarity
      99.17%
    • Coverage
      88.46%
    • Alignment (schematic)

      SEQ ID NO 5
      88.46% cov
      AY394653
      100% cov
    • Alignment Length
      969 bp
    • CIGAR string
      102H700MN13MNMIM2I80MN33MN6MN127M24H mismatches: 5 - insertions: 3 - deletions: 0
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261391559
      FM999788
    • Hit length
      2,277,550 bp
    • E Value
      0E0
    • BLAST Score
      1,663.1 bits
    • Similarity
      95.93%
    • Coverage
      93.96%
    • Alignment (schematic)

      SEQ ID NO 5
      93.96% cov
      FM999788
      0.05% cov
    • Alignment Length
      1,032 bp
    • CIGAR string
      66H566MN26MNIMDMN7MN12M2N4MN2M2N15MN92MI3M2NDMNMNMNI5MD78MN27M2N5MIMD3M2N3MN81MN4MN7M4NI4MNMD3MN19MD2MIMN14M mismatches: 30 - insertions: 6 - deletions: 6
Occurrence
26 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
363
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • Neisseria meningitidis

    Neisseria meningitidis

    • Public DB hit
      GI:293651786
      3A2R_X
      1 of 17 hits reported for Neisseria meningitidis.
    • Hit length
      355 aa
    • E Value
      0E0
    • BLAST Score
      706.1 bits
    • Similarity
      96.97%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      3A2R_X
      100% cov
    • Alignment Length
      363 aa
    • CIGAR string
      13M8D2N248MN91M mismatches: 3 - insertions: 0 - deletions: 8
  • Neisseria meningitidis FAM18

    Neisseria meningitidis FAM18

    • Public DB hit
      GI:121635698
      YP_975943
    • Hit length
      404 aa
    • E Value
      0E0
    • BLAST Score
      696.8 bits
    • Similarity
      98.86%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      YP_975943
      86.63% cov
    • Alignment Length
      350 aa
    • CIGAR string
      13H2NM6N341M mismatches: 8 - insertions: 0 - deletions: 0
  • Neisseria meningitidis M6190

    Neisseria meningitidis M6190

    • Public DB hit
      GI:325131282
      EGC53993
    • Hit length
      360 aa
    • E Value
      0E0
    • BLAST Score
      694.5 bits
    • Similarity
      98.86%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      EGC53993
      97.22% cov
    • Alignment Length
      350 aa
    • CIGAR string
      13H2NM6N341M mismatches: 8 - insertions: 0 - deletions: 0
  • Neisseria meningitidis G2136

    Neisseria meningitidis G2136

    • Public DB hit
      GI:325199131
      ADY94587
    • Hit length
      361 aa
    • E Value
      0E0
    • BLAST Score
      663.7 bits
    • Similarity
      96.02%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      ADY94587
      97.23% cov
    • Alignment Length
      352 aa
  • Neisseria meningitidis 961-5945

    Neisseria meningitidis 961-5945

    • Public DB hit
      GI:325141399
      EGC63878
    • Hit length
      361 aa
    • E Value
      0E0
    • BLAST Score
      659.1 bits
    • Similarity
      95.74%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      EGC63878
      97.23% cov
    • Alignment Length
      352 aa
  • Neisseria meningitidis 8013

    Neisseria meningitidis 8013

    • Public DB hit
      GI:261393364
      CAX51000
    • Hit length
      360 aa
    • E Value
      0E0
    • BLAST Score
      648.7 bits
    • Similarity
      94.57%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      CAX51000
      97.22% cov
    • Alignment Length
      350 aa
  • Neisseria meningitidis serogroup C

    Neisseria meningitidis serogroup C

    • Public DB hit
      GI:37623926
      AAQ95603
    • Hit length
      323 aa
    • E Value
      0E0
    • BLAST Score
      639.4 bits
    • Similarity
      99.07%
    • Coverage
      88.71%
    • Alignment (schematic)

      SEQ ID NO 6
      88.71% cov
      AAQ95603
      100% cov
    • Alignment Length
      323 aa
  • Neisseria meningitidis N1568

    Neisseria meningitidis N1568

    • Public DB hit
      GI:325127318
      EGC50253
    • Hit length
      358 aa
    • E Value
      7.5E-179
    • BLAST Score
      631.7 bits
    • Similarity
      92.86%
    • Coverage
      96.42%
    • Alignment (schematic)

      SEQ ID NO 6
      96.42% cov
      EGC50253
      97.21% cov
    • Alignment Length
      350 aa
Occurrence
33 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
187
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:287941
      X54207
      1 of 10 hits reported for synthetic construct.
    • Hit length
      2,830 bp
    • E Value
      1.56E-65
    • BLAST Score
      257.8 bits
    • Similarity
      98.63%
    • Coverage
      78.07%
    • Alignment (schematic)

      SEQ ID NO 7
      78.07% cov
      X54207
      5.12% cov
    • Alignment Length
      146 bp
    • CIGAR string
      1H81MN56MD7M40H mismatches: 1 - insertions: 0 - deletions: 1
  • Burkholderia cenocepacia

    Burkholderia cenocepacia

    • Public DB hit
      GI:213959327
      EU874251
    • Hit length
      3,516 bp
    • E Value
      3.38E-62
    • BLAST Score
      246.7 bits
    • Similarity
      98.57%
    • Coverage
      74.33%
    • Alignment (schematic)

      SEQ ID NO 7
      74.33% cov
      EU874251
      3.98% cov
    • Alignment Length
      140 bp
    • CIGAR string
      82MN52MI4M48H mismatches: 1 - insertions: 1 - deletions: 0
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:45489
      X62498
      1 of 2 hits reported for Escherichia coli.
    • Hit length
      2,731 bp
    • E Value
      3.38E-62
    • BLAST Score
      246.7 bits
    • Similarity
      99.26%
    • Coverage
      72.73%
    • Alignment (schematic)

      SEQ ID NO 7
      72.73% cov
      X62498
      4.98% cov
    • Alignment Length
      136 bp
    • CIGAR string
      82MN53M51H mismatches: 1 - insertions: 0 - deletions: 0
  • Cloning vector pT7/Nde

    Cloning vector pT7/Nde

    • Public DB hit
      GI:806881
      U25269
    • Hit length
      2,894 bp
    • E Value
      1.21E-61
    • BLAST Score
      244.9 bits
    • Similarity
      98.56%
    • Coverage
      73.8%
    • Alignment (schematic)

      SEQ ID NO 7
      73.8% cov
      U25269
      4.8% cov
    • Alignment Length
      139 bp
    • CIGAR string
      1H81MN52MI4M48H mismatches: 1 - insertions: 1 - deletions: 0
  • Cloning vector pGEMEX-2

    Cloning vector pGEMEX-2

    • Public DB hit
      GI:8216954
      X65318
    • Hit length
      3,995 bp
    • E Value
      1.57E-60
    • BLAST Score
      241.2 bits
    • Similarity
      99.25%
    • Coverage
      71.12%
    • Alignment (schematic)

      SEQ ID NO 7
      71.12% cov
      X65318
      3.33% cov
    • Alignment Length
      133 bp
    • CIGAR string
      82MN50M54H mismatches: 1 - insertions: 0 - deletions: 0
  • Cloning vector pGEMEX-1

    Cloning vector pGEMEX-1

    • Public DB hit
      GI:8216952
      X65317
    • Hit length
      3,993 bp
    • E Value
      1.57E-60
    • BLAST Score
      241.2 bits
    • Similarity
      99.25%
    • Coverage
      71.12%
    • Alignment (schematic)

      SEQ ID NO 7
      71.12% cov
      X65317
      3.33% cov
    • Alignment Length
      133 bp
    • CIGAR string
      82MN50M54H mismatches: 1 - insertions: 0 - deletions: 0
  • Cloning vector pT7/Nco

    Cloning vector pT7/Nco

    • Public DB hit
      GI:806892
      U25273
    • Hit length
      2,891 bp
    • E Value
      9.45E-58
    • BLAST Score
      232 bits
    • Similarity
      97.78%
    • Coverage
      72.19%
    • Alignment (schematic)

      SEQ ID NO 7
      72.19% cov
      U25273
      4.64% cov
    • Alignment Length
      135 bp
    • CIGAR string
      1H81MN15MND36M51H mismatches: 2 - insertions: 0 - deletions: 1
  • Enterobacteria phage T7

    Enterobacteria phage T7

    • Public DB hit
      GI:265524965
      GU071091
      1 of 7 hits reported for Enterobacteria phage T7.
    • Hit length
      39,778 bp
    • E Value
      9.52E-53
    • BLAST Score
      215.3 bits
    • Similarity
      99.16%
    • Coverage
      63.64%
    • Alignment (schematic)

      SEQ ID NO 7
      63.64% cov
      GU071091
      0.3% cov
    • Alignment Length
      119 bp
    • CIGAR string
      14H68MN50M54H mismatches: 1 - insertions: 0 - deletions: 0
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
29
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
Occurrence
32 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
54
Type
DNA
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
7
Type
peptide
Locations
Detailed Description, Drawings

Declared organism:
Not specified

Determined organism:
Occurrence
30 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback