Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
49 sequences found in this patent (in total)

Displaying 1 - 10 of 49 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
805
Type
nucleotide
Locations
Detailed Description

Declared organism:
Physcomitrella patens

Determined organism:
  • Physcomitrella patens

    Physcomitrella patens

    • Public DB hit
      GI:168002005
      XM_001753653
      1 of 2 hits reported for Physcomitrella patens.
    • Hit length
      1,061 bp
    • E Value
      0E0
    • BLAST Score
      1,386.1 bits
    • Similarity
      100%
    • Coverage
      93.17%
    • Alignment (schematic)

      SEQ ID NO 1
      93.17% cov
      XM_001753653
      70.69% cov
    • Alignment Length
      750 bp
    • CIGAR string
      48H750M7H mismatches: 0 - insertions: 0 - deletions: 0
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224123939
      XM_002330211
    • Hit length
      1,096 bp
    • E Value
      4.67E-57
    • BLAST Score
      232 bits
    • Similarity
      75.41%
    • Coverage
      65.71%
    • Alignment (schematic)

      SEQ ID NO 1
      65.71% cov
      XM_002330211
      48.54% cov
    • Alignment Length
      549 bp
    • CIGAR string
      176H7MN5MNM2NMN4MNMN5MN2MN2MN2MN11MN5MN2MN8MN7MN3MIMN2MI2MD3M2DMI2M2N3MN7MD2MI2MN2MN8MINM2I4MNMI5MNMI3MD2MD8MN5MN2MNMN3MN2MN17MN4M2N2MN2MDMNMI2MN2MI2MD2MDMIMDMIM2N2MN2MN5MN4MN3MNM2N8MNMN3MN2MN8M2N4MI2MDN2MN2MN2MN2MN2MDMNMIMN12MN8MN2M2N4MN2MN2MN5MN2MI2MND5MN4MN3MN2MN2MN2MN5MNMNIMIM2NM2D29MN5MN9MN3MNMN7MN2MNMN4M3N2MI3MD2MN2MN7MN3MN2MN2MN4MI3MD2MN3MN5MN11M100H mismatches: 98 - insertions: 20 - deletions: 17
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
671
Type
nucleotide
Locations
Detailed Description

Declared organism:
Physcomitrella patens

Determined organism:
  • Physcomitrella patens

    Physcomitrella patens

    • Public DB hit
      GI:168054150
      XM_001779444
      1 of 2 hits reported for Physcomitrella patens.
    • Hit length
      1,221 bp
    • E Value
      0E0
    • BLAST Score
      1,227.3 bits
    • Similarity
      100%
    • Coverage
      98.96%
    • Alignment (schematic)

      SEQ ID NO 2
      98.96% cov
      XM_001779444
      54.38% cov
    • Alignment Length
      664 bp
    • CIGAR string
      7H664M mismatches: 0 - insertions: 0 - deletions: 0
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225456095
      XM_002281243
      1 of 2 hits reported for Vitis vinifera.
    • Hit length
      1,476 bp
    • E Value
      3.01E-53
    • BLAST Score
      219 bits
    • Similarity
      76.73%
    • Coverage
      62.74%
    • Alignment (schematic)

      SEQ ID NO 2
      62.74% cov
      XM_002281243
      28.52% cov
    • Alignment Length
      434 bp
    • CIGAR string
      172H6MN9M2N3M2NMN6MI2MD3MNMN3MN2MNMN2MN2MN2MN6M2N7MN5MDMI5M2DMDMN4MNMNMIMIMI6MN3MN4MN2M2NMN2MN5MN2M2NMN2MN2MN2MN5MN2MN2M2N13MN8MN2MNMI3MINMDMD8MI2MNMDMN2M2NMN6MIMNM2DMIN4MIMN2MD2MN4MN2MN3MN16MN2MN2M3N12MN9MNMN5MN7M2N2MN2MN3MDNMI2MN8MN40MIMD5MN3MNMNM2N21M78H mismatches: 75 - insertions: 13 - deletions: 13
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
749
Type
nucleotide
Locations
Detailed Description

Declared organism:
Physcomitrella patens

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
815
Type
nucleotide
Locations
Detailed Description

Declared organism:
Physcomitrella patens

Determined organism:
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
490
Type
nucleotide
Locations
Detailed Description

Declared organism:
Physcomitrella patens

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
667
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Physcomitrella patens

Determined organism:
  • Physcomitrella patens

    Physcomitrella patens

    • Public DB hit
      GI:168002005
      XM_001753653
      1 of 2 hits reported for Physcomitrella patens.
    • Hit length
      1,061 bp
    • E Value
      0E0
    • BLAST Score
      1,210.7 bits
    • Similarity
      100%
    • Coverage
      98.2%
    • Alignment (schematic)

      SEQ ID NO 6
      98.2% cov
      XM_001753653
      61.73% cov
    • Alignment Length
      655 bp
    • CIGAR string
      4H655M8H mismatches: 0 - insertions: 0 - deletions: 0
  • Populus trichocarpa

    Populus trichocarpa

    • Public DB hit
      GI:224123939
      XM_002330211
    • Hit length
      1,096 bp
    • E Value
      3.84E-57
    • BLAST Score
      232 bits
    • Similarity
      75.41%
    • Coverage
      79.31%
    • Alignment (schematic)

      SEQ ID NO 6
      79.31% cov
      XM_002330211
      48.54% cov
    • Alignment Length
      549 bp
    • CIGAR string
      80H11MN5MN3MN2MD3MI4MN2MN2MN3MN7MN2MN2MD3MI2M3N4MNMN2MN7MNMN3MN9MN5MN29M2DM2NMIMINMN5MN2MN2MN2MN3MN4MN5MDN2MI2MN5MN2MN2MN4M2N2MN8MN12MNMIMNMD2MN2MN2MN2MN2MND2MI4M2N8MN2MN3MNMN8M2NMN3MN4MN5MN2MN2M2NMIMDMIMD2MD2MI2MN2MIMNMD2MN2M2N4MN17MN2MN3MNMN2MN5MN8MD2MD3MIMN5MIMN4M2IMNI8MN2MN2MI2MD7MN3M2N2MIM2D3MD2MI2MNMI3MN7MN8MN2MN5MN11MN2MN2MN2MN5MNMN4MNM2NMN5MN7M58H mismatches: 98 - insertions: 20 - deletions: 17
Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
698
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Physcomitrella patens

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
2,119
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Physcomitrella patens

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
883
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Physcomitrella patens

Occurrence
13 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
11
Length
192
Type
peptide
Locations
Claims, Detailed Description

Declared organism:
Physcomitrella patens

Determined organism:
  • Physcomitrella patens

    Physcomitrella patens

    • Public DB hit
      GI:168002006
      XP_001753705
      1 of 4 hits reported for Physcomitrella patens.
    • Hit length
      192 aa
    • E Value
      9.26E-109
    • BLAST Score
      397.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_001753705
      100% cov
    • Alignment Length
      192 aa
    • CIGAR string
      192M mismatches: 0 - insertions: 0 - deletions: 0
  • Sorghum bicolor

    Sorghum bicolor

    • Public DB hit
      GI:242056867
      XP_002457579
    • Hit length
      193 aa
    • E Value
      7.55E-95
    • BLAST Score
      350.9 bits
    • Similarity
      94.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_002457579
      100% cov
    • Alignment Length
      193 aa
    • CIGAR string
      9MN3MN29MNMN15MNMN10MN6MN8MN8MN11MN2MN4M2N2MNMN10MN2MN3M2N3MNIN5MN3MN3MN2MNMN4MN13MN4M mismatches: 29 - insertions: 1 - deletions: 0
  • Zea mays

    Zea mays

    • Public DB hit
      GI:162464302
      NP_001105262
    • Hit length
      193 aa
    • E Value
      2.2E-94
    • BLAST Score
      349.4 bits
    • Similarity
      94.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      NP_001105262
      100% cov
    • Alignment Length
      193 aa
  • Oryza sativa Japonica Group

    Oryza sativa Japonica Group

    • Public DB hit
      GI:115435714
      NP_001042615
    • Hit length
      193 aa
    • E Value
      6.23E-94
    • BLAST Score
      347.8 bits
    • Similarity
      93.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      NP_001042615
      100% cov
    • Alignment Length
      193 aa
  • Nicotiana tabacum

    Nicotiana tabacum

    • Public DB hit
      GI:6563322
      AAF17254
    • Hit length
      193 aa
    • E Value
      9.95E-94
    • BLAST Score
      347.1 bits
    • Similarity
      94.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      AAF17254
      100% cov
    • Alignment Length
      193 aa
  • Arabidopsis lyrata subsp. lyrata

    Arabidopsis lyrata subsp. lyrata

    • Public DB hit
      GI:297843056
      XP_002889409
      1 of 2 hits reported for Arabidopsis lyrata subsp. lyrata.
    • Hit length
      193 aa
    • E Value
      2.64E-93
    • BLAST Score
      345.5 bits
    • Similarity
      93.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_002889409
      100% cov
    • Alignment Length
      193 aa
  • Solanum tuberosum

    Solanum tuberosum

    • Public DB hit
      GI:76573331
      ABA46770
    • Hit length
      193 aa
    • E Value
      2.89E-93
    • BLAST Score
      345.5 bits
    • Similarity
      94.3%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      ABA46770
      100% cov
    • Alignment Length
      193 aa
  • Vitis vinifera

    Vitis vinifera

    • Public DB hit
      GI:225437537
      XP_002275765
    • Hit length
      193 aa
    • E Value
      5.59E-93
    • BLAST Score
      344.7 bits
    • Similarity
      93.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      XP_002275765
      100% cov
    • Alignment Length
      193 aa
  • Hordeum vulgare subsp. vulgare

    Hordeum vulgare subsp. vulgare

    • Public DB hit
      GI:326499492
      BAJ86057
      1 of 2 hits reported for Hordeum vulgare subsp. vulgare.
    • Hit length
      193 aa
    • E Value
      5.98E-93
    • BLAST Score
      344.4 bits
    • Similarity
      93.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      BAJ86057
      100% cov
    • Alignment Length
      193 aa
  • Triticum aestivum

    Triticum aestivum

    • Public DB hit
      GI:187424044
      ACD03829
    • Hit length
      193 aa
    • E Value
      5.98E-93
    • BLAST Score
      344.4 bits
    • Similarity
      93.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 11
      100% cov
      ACD03829
      100% cov
    • Alignment Length
      193 aa
Occurrence
34 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback