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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (EBI) EMBL-EBI Pat EPO Sequence Listings
12 sequences found in this patent (in total)

Displaying 1 - 10 of 12 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
6
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73957788
      XP_546937
    • Hit length
      1,108 aa
    • E Value
      1.58E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_546937
      0.54% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310118388
      XP_003119104
      1 of 6 hits reported for Homo sapiens.
    • Hit length
      670 aa
    • E Value
      1.62E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003119104
      0.9% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Xanthomonas oryzae pv. oryzicola BLS256

    Xanthomonas oryzae pv. oryzicola BLS256

    • Public DB hit
      GI:166710260
      ZP_02241467
    • Hit length
      464 aa
    • E Value
      1.95E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_02241467
      1.29% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296192295
      XP_002744021
    • Hit length
      902 aa
    • E Value
      2.04E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002744021
      0.67% cov
    • Alignment Length
      6 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335284194
      XP_003354535
      1 of 3 hits reported for Sus scrofa.
    • Hit length
      802 aa
    • E Value
      2.26E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003354535
      0.75% cov
    • Alignment Length
      6 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334324982
      XP_001378769
    • Hit length
      751 aa
    • E Value
      2.32E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001378769
      0.8% cov
    • Alignment Length
      6 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301780884
      XP_002925860
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      801 aa
    • E Value
      2.45E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002925860
      0.75% cov
    • Alignment Length
      6 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218890
      XP_001492971
    • Hit length
      802 aa
    • E Value
      2.52E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001492971
      0.75% cov
    • Alignment Length
      6 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332865556
      XP_003318557
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      203 aa
    • E Value
      2.54E3
    • BLAST Score
      24.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003318557
      2.96% cov
    • Alignment Length
      6 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
18
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335284195
      XM_003354488
      1 of 4 hits reported for Sus scrofa.
    • Hit length
      2,849 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003354488
      0.63% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332865555
      XM_003318509
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      673 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003318509
      2.67% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310120066
      XM_003118598
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      3,034 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_003118598
      0.59% cov
    • Alignment Length
      18 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297680128
      XR_093826
    • Hit length
      2,797 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_093826
      0.64% cov
    • Alignment Length
      18 bp
  • Bos taurus

    Bos taurus

    • Public DB hit
      GI:297490507
      XR_084076
      1 of 2 hits reported for Bos taurus.
    • Hit length
      2,998 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XR_084076
      0.6% cov
    • Alignment Length
      18 bp
  • Ixodes scapularis

    Ixodes scapularis

    • Public DB hit
      GI:241671174
      XM_002399972
    • Hit length
      399 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_002399972
      4.51% cov
    • Alignment Length
      18 bp
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218889
      XM_001492921
    • Hit length
      2,409 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XM_001492921
      0.75% cov
    • Alignment Length
      18 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
13
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310118388
      XP_003119104
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      670 aa
    • E Value
      3.82E-3
    • BLAST Score
      44.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003119104
      1.94% cov
    • Alignment Length
      13 aa
    • CIGAR string
      13M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:301608582
      XP_002933873
    • Hit length
      803 aa
    • E Value
      1.84E-2
    • BLAST Score
      42.2 bits
    • Similarity
      92.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002933873
      1.62% cov
    • Alignment Length
      13 aa
  • Monodelphis domestica

    Monodelphis domestica

    • Public DB hit
      GI:334324982
      XP_001378769
    • Hit length
      751 aa
    • E Value
      2.19E-2
    • BLAST Score
      41.8 bits
    • Similarity
      92.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001378769
      1.73% cov
    • Alignment Length
      13 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
39
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310120066
      XM_003118598
      1 of 24 hits reported for Homo sapiens.
    • Hit length
      3,034 bp
    • E Value
      2.92E-12
    • BLAST Score
      77.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XM_003118598
      1.29% cov
    • Alignment Length
      39 bp
    • CIGAR string
      39M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:313883833
      HQ258652
    • Hit length
      2,446 bp
    • E Value
      2.92E-12
    • BLAST Score
      77.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      HQ258652
      1.59% cov
    • Alignment Length
      39 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
9
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332867685
      XP_003318722
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      605 aa
    • E Value
      8.06E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003318722
      1.49% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194218890
      XP_001492971
    • Hit length
      802 aa
    • E Value
      9.08E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001492971
      1.12% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74196375
      BAE33076
      1 of 6 hits reported for Mus musculus.
    • Hit length
      802 aa
    • E Value
      9.17E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      BAE33076
      1.12% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:293341124
      XP_002724855
      1 of 6 hits reported for Rattus norvegicus.
    • Hit length
      803 aa
    • E Value
      9.25E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002724855
      1.12% cov
    • Alignment Length
      9 aa
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301780884
      XP_002925860
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      801 aa
    • E Value
      9.51E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002925860
      1.12% cov
    • Alignment Length
      9 aa
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310118388
      XP_003119104
    • Hit length
      670 aa
    • E Value
      9.87E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003119104
      1.34% cov
    • Alignment Length
      9 aa
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335284194
      XP_003354535
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      802 aa
    • E Value
      9.96E-1
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003354535
      1.12% cov
    • Alignment Length
      9 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73957788
      XP_546937
    • Hit length
      1,108 aa
    • E Value
      1.04E0
    • BLAST Score
      36.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_546937
      0.81% cov
    • Alignment Length
      9 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
27
Type
DNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332867914
      XM_003318697
      1 of 9 hits reported for Pan troglodytes.
    • Hit length
      3,036 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003318697
      0.89% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:310120066
      XM_003118598
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      3,034 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003118598
      0.89% cov
    • Alignment Length
      27 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301780883
      XM_002925814
    • Hit length
      2,406 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002925814
      1.12% cov
    • Alignment Length
      27 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297680128
      XR_093826
    • Hit length
      2,797 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XR_093826
      0.97% cov
    • Alignment Length
      27 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296192294
      XM_002743975
    • Hit length
      2,709 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002743975
      1% cov
    • Alignment Length
      27 bp
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
6
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Plasmodium knowlesi strain H

    Plasmodium knowlesi strain H

    • Public DB hit
      GI:221061259
      XP_002262199
    • Hit length
      1,222 aa
    • E Value
      1.56E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002262199
      0.49% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium vivax Sal-1

    Plasmodium vivax Sal-1

    • Public DB hit
      GI:156103065
      XP_001617225
    • Hit length
      1,226 aa
    • E Value
      1.56E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001617225
      0.49% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium chabaudi chabaudi

    Plasmodium chabaudi chabaudi

    • Public DB hit
      GI:70945822
      XP_742690
    • Hit length
      500 aa
    • E Value
      1.56E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_742690
      1.2% cov
    • Alignment Length
      6 aa
    • CIGAR string
      6M mismatches: 0 - insertions: 0 - deletions: 0
  • Plasmodium berghei ANKA

    Plasmodium berghei ANKA

    • Public DB hit
      GI:68063149
      XP_673584
    • Hit length
      446 aa
    • E Value
      1.56E3
    • BLAST Score
      24.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_673584
      1.35% cov
    • Alignment Length
      6 aa
  • Spirochaeta smaragdinae DSM 11293

    Spirochaeta smaragdinae DSM 11293

    • Public DB hit
      GI:302339363
      YP_003804569
    • Hit length
      669 aa
    • E Value
      3.35E3
    • BLAST Score
      24 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_003804569
      0.9% cov
    • Alignment Length
      6 aa
  • Dictyostelium purpureum

    Dictyostelium purpureum

    • Public DB hit
      GI:330804869
      XP_003290412
    • Hit length
      185 aa
    • E Value
      3.67E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_003290412
      3.24% cov
    • Alignment Length
      6 aa
  • Magnaporthe oryzae 70-15

    Magnaporthe oryzae 70-15

    • Public DB hit
      GI:145603562
      XP_369509
    • Hit length
      616 aa
    • E Value
      3.77E3
    • BLAST Score
      23.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_369509
      0.97% cov
    • Alignment Length
      6 aa
  • Chelativorans sp. BNC1

    Chelativorans sp. BNC1

    • Public DB hit
      GI:110633044
      YP_673252
    • Hit length
      114 aa
    • E Value
      5.02E3
    • BLAST Score
      23.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_673252
      5.26% cov
    • Alignment Length
      6 aa
  • Dyadobacter fermentans DSM 18053

    Dyadobacter fermentans DSM 18053

    • Public DB hit
      GI:255038447
      YP_003089068
    • Hit length
      691 aa
    • E Value
      7.52E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_003089068
      0.87% cov
    • Alignment Length
      6 aa
  • Methanococcus aeolicus Nankai-3

    Methanococcus aeolicus Nankai-3

    • Public DB hit
      GI:150400822
      YP_001324588
    • Hit length
      341 aa
    • E Value
      7.87E3
    • BLAST Score
      22.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_001324588
      1.76% cov
    • Alignment Length
      6 aa
  • Photobacterium profundum 3TCK

    Photobacterium profundum 3TCK

    • Public DB hit
      GI:90413565
      ZP_01221555
    • Hit length
      325 aa
    • E Value
      1.05E4
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      ZP_01221555
      1.85% cov
    • Alignment Length
      6 aa
  • Photobacterium profundum SS9

    Photobacterium profundum SS9

    • Public DB hit
      GI:54307528
      YP_128548
    • Hit length
      332 aa
    • E Value
      1.09E4
    • BLAST Score
      22.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      YP_128548
      1.81% cov
    • Alignment Length
      6 aa
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
18
Type
RNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335301246
      XM_003132908
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      2,460 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_003132908
      0.73% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840476
      XM_509394
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,504 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_509394
      0.72% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332250734
      XR_122543
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      3,276 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XR_122543
      0.55% cov
    • Alignment Length
      18 bp
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:302058261
      NM_004658
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      3,841 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_004658
      0.47% cov
    • Alignment Length
      18 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301779845
      XM_002925294
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      2,421 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002925294
      0.74% cov
    • Alignment Length
      18 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297693025
      XM_002823787
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,779 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002823787
      0.48% cov
    • Alignment Length
      18 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297263583
      XM_002807993
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      2,650 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002807993
      0.68% cov
    • Alignment Length
      18 bp
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291407000
      XM_002719778
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      2,439 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_002719778
      0.74% cov
    • Alignment Length
      18 bp
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73995243
      XM_543403
    • Hit length
      2,478 bp
    • E Value
      1.05E0
    • BLAST Score
      36.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_543403
      0.73% cov
    • Alignment Length
      18 bp
Occurrence
Tools
PatSeq Finder
SEQ ID NO
9
Length
9
Type
peptide
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:335301247
      XP_003132956
      1 of 2 hits reported for Sus scrofa.
    • Hit length
      819 aa
    • E Value
      3.6E0
    • BLAST Score
      34.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003132956
      1.1% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297693026
      XP_002823833
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      938 aa
    • E Value
      3.6E0
    • BLAST Score
      34.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002823833
      0.96% cov
    • Alignment Length
      9 aa
    • CIGAR string
      9M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
2 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
27
Type
RNA
Locations
Fulltext

Declared organism:
Artificial

Determined organism:
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840476
      XM_509394
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      2,504 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_509394
      1.08% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:302058261
      NM_004658
      1 of 13 hits reported for Homo sapiens.
    • Hit length
      3,841 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_004658
      0.7% cov
    • Alignment Length
      27 bp
    • CIGAR string
      27M mismatches: 0 - insertions: 0 - deletions: 0
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296212988
      XM_002753031
      1 of 4 hits reported for Callithrix jacchus.
    • Hit length
      2,337 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_002753031
      1.16% cov
    • Alignment Length
      27 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:190691924
      EU832646
      1 of 6 hits reported for synthetic construct.
    • Hit length
      2,374 bp
    • E Value
      1.78E-5
    • BLAST Score
      54 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EU832646
      1.14% cov
    • Alignment Length
      27 bp
Occurrence
Tools
PatSeq Finder

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