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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
162 sequences found in this patent (in total)

Displaying 1 - 10 of 162 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,157
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:71981144
      NM_001026087
      1 of 2 hits reported for Caenorhabditis elegans.
    • Hit length
      1,259 bp
    • E Value
      0E0
    • BLAST Score
      2,122.9 bits
    • Similarity
      99.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NM_001026087
      92.14% cov
    • Alignment Length
      1,160 bp
    • CIGAR string
      590M2IMI566M mismatches: 0 - insertions: 3 - deletions: 0
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
385
Type
peptide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:71981145
      NP_001021258
      1 of 3 hits reported for Caenorhabditis elegans.
    • Hit length
      386 aa
    • E Value
      0E0
    • BLAST Score
      791.2 bits
    • Similarity
      99.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001021258
      100% cov
    • Alignment Length
      386 aa
    • CIGAR string
      198MI187M mismatches: 0 - insertions: 1 - deletions: 0
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308478283
      XP_003101353
    • Hit length
      401 aa
    • E Value
      0E0
    • BLAST Score
      663.7 bits
    • Similarity
      86.82%
    • Coverage
      99.22%
    • Alignment (schematic)

      SEQ ID NO 2
      99.22% cov
      XP_003101353
      99.25% cov
    • Alignment Length
      402 aa
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:309356496
      CAP37130
      1 of 2 hits reported for Caenorhabditis briggsae.
    • Hit length
      381 aa
    • E Value
      2.05E-171
    • BLAST Score
      607.1 bits
    • Similarity
      85.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CAP37130
      99.48% cov
    • Alignment Length
      389 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
1,202
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:71981135
      NM_001026086
      1 of 2 hits reported for Caenorhabditis elegans.
    • Hit length
      1,188 bp
    • E Value
      0E0
    • BLAST Score
      2,089.7 bits
    • Similarity
      98.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_001026086
      99.92% cov
    • Alignment Length
      1,205 bp
    • CIGAR string
      594M3I180M6D2M2DMD3M7DMDMD402M mismatches: 0 - insertions: 3 - deletions: 18
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308478282
      XM_003101305
    • Hit length
      1,206 bp
    • E Value
      0E0
    • BLAST Score
      987.2 bits
    • Similarity
      83.29%
    • Coverage
      90.1%
    • Alignment (schematic)

      SEQ ID NO 3
      90.1% cov
      XM_003101305
      90.3% cov
    • Alignment Length
      1,101 bp
    • CIGAR string
      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 mismatches: 154 - insertions: 18 - deletions: 12
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
400
Type
peptide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:71981136
      NP_001021257
      1 of 3 hits reported for Caenorhabditis elegans.
    • Hit length
      395 aa
    • E Value
      0E0
    • BLAST Score
      803.9 bits
    • Similarity
      98.25%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_001021257
      100% cov
    • Alignment Length
      401 aa
    • CIGAR string
      197MI61M6D136M mismatches: 0 - insertions: 1 - deletions: 6
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308478283
      XP_003101353
    • Hit length
      401 aa
    • E Value
      0E0
    • BLAST Score
      699.9 bits
    • Similarity
      90.3%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 4
      99.25% cov
      XP_003101353
      99.25% cov
    • Alignment Length
      402 aa
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:309356496
      CAP37130
      1 of 2 hits reported for Caenorhabditis briggsae.
    • Hit length
      381 aa
    • E Value
      9.55E-169
    • BLAST Score
      598.2 bits
    • Similarity
      81.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      CAP37130
      99.48% cov
    • Alignment Length
      404 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
1,214
Type
nucleotide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:86564878
      NM_077324
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      2,204.2 bits
    • Similarity
      99.51%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_077324
      76.75% cov
    • Alignment Length
      1,214 bp
    • CIGAR string
      1115M4D3M2D90M mismatches: 0 - insertions: 0 - deletions: 6
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459620
      XM_003092079
    • Hit length
      1,209 bp
    • E Value
      0E0
    • BLAST Score
      942.9 bits
    • Similarity
      81.49%
    • Coverage
      96.13%
    • Alignment (schematic)

      SEQ ID NO 5
      96.13% cov
      XM_003092079
      96.03% cov
    • Alignment Length
      1,178 bp
    • CIGAR string
      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 mismatches: 190 - insertions: 11 - deletions: 17
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578450
      XM_002644162
    • Hit length
      1,215 bp
    • E Value
      1.74E-152
    • BLAST Score
      549.6 bits
    • Similarity
      77.91%
    • Coverage
      76.77%
    • Alignment (schematic)

      SEQ ID NO 5
      76.77% cov
      XM_002644162
      76.46% cov
    • Alignment Length
      955 bp
    • CIGAR string
      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 mismatches: 162 - insertions: 23 - deletions: 26
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
404
Type
peptide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:25152230
      NP_509725
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      819.3 bits
    • Similarity
      99.5%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_509725
      100% cov
    • Alignment Length
      404 aa
    • CIGAR string
      370M2D32M mismatches: 0 - insertions: 0 - deletions: 2
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459621
      XP_003092127
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      767.3 bits
    • Similarity
      95.05%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_003092127
      100% cov
    • Alignment Length
      404 aa
    • CIGAR string
      5M4NMNMNM2N2MN2MN19MN4MNM2N5MN128MN14MN26MN10MN48MN4MN36MN16MN3MN8MNM2N8M2D4MNMN25M mismatches: 29 - insertions: 0 - deletions: 2
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578451
      XP_002644208
    • Hit length
      404 aa
    • E Value
      2.5E-178
    • BLAST Score
      630.2 bits
    • Similarity
      84.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_002644208
      100% cov
    • Alignment Length
      408 aa
    • CIGAR string
      5MDNM2NM5NM2NM3N4MN2M4N2M3N3MNMNMNMN2M2N5MN4MN19MN14MN4MN50MN3M2N2MN2M2N3MNMN2MN5M2NM2N2MNM2NMN3M4N3MN2MN3MN4MN9MN9MN20MN22M3NMD2N2M2N2M2N3MN13M2NMN11MN3MN3MN13MN5MNMN2MN4IN7MN2D4MNMNMN2MN20M mismatches: 86 - insertions: 4 - deletions: 4
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
1,208
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:86564878
      NM_077324
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      2,231.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NM_077324
      76.75% cov
    • Alignment Length
      1,208 bp
    • CIGAR string
      1208M mismatches: 0 - insertions: 0 - deletions: 0
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459620
      XM_003092079
    • Hit length
      1,209 bp
    • E Value
      0E0
    • BLAST Score
      965.1 bits
    • Similarity
      81.83%
    • Coverage
      96.11%
    • Alignment (schematic)

      SEQ ID NO 7
      96.11% cov
      XM_003092079
      96.03% cov
    • Alignment Length
      1,172 bp
    • CIGAR string
      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 mismatches: 191 - insertions: 11 - deletions: 11
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578450
      XM_002644162
    • Hit length
      1,215 bp
    • E Value
      3.69E-159
    • BLAST Score
      571.7 bits
    • Similarity
      76.88%
    • Coverage
      89.32%
    • Alignment (schematic)

      SEQ ID NO 7
      89.32% cov
      XM_002644162
      89.55% cov
    • Alignment Length
      1,116 bp
    • CIGAR string
      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 mismatches: 193 - insertions: 37 - deletions: 28
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
402
Type
peptide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:25152230
      NP_509725
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      823.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_509725
      100% cov
    • Alignment Length
      402 aa
    • CIGAR string
      402M mismatches: 0 - insertions: 0 - deletions: 0
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459621
      XP_003092127
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      772.7 bits
    • Similarity
      95.52%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003092127
      100% cov
    • Alignment Length
      402 aa
    • CIGAR string
      5M4NMNMNM2N2MN2MN19MN4MNM2N5MN128MN14MN26MN10MN48MN4MN36MN16MN3MN8MNM2N12MNMN25M mismatches: 29 - insertions: 0 - deletions: 0
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578451
      XP_002644208
    • Hit length
      404 aa
    • E Value
      4.92E-180
    • BLAST Score
      636 bits
    • Similarity
      84.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002644208
      100% cov
    • Alignment Length
      406 aa
    • CIGAR string
      5MDNM2NM5NM2NM3N4MN2M4N2M3N3MNMNMNMN2M2N5MN4MN19MN14MN4MN50MN3M2N2MN2M2N3MNMN2MN5M2NM2N2MNM2NMN3M4N3MN2MN3MN4MN9MN9MN20MN22M3NMD2N2M2N2M2N3MN13M2NMN11MN3MN3MN13MN5MNMN2MN4IN7MN4MNMNMN2MN20M mismatches: 86 - insertions: 4 - deletions: 2
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
1,220
Type
nucleotide
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:86564878
      NM_077324
    • Hit length
      1,574 bp
    • E Value
      0E0
    • BLAST Score
      2,176.5 bits
    • Similarity
      99.02%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_077324
      76.75% cov
    • Alignment Length
      1,220 bp
    • CIGAR string
      1115M4D2M4DM4D90M mismatches: 0 - insertions: 0 - deletions: 12
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459620
      XM_003092079
    • Hit length
      1,209 bp
    • E Value
      0E0
    • BLAST Score
      926.3 bits
    • Similarity
      81.25%
    • Coverage
      96.15%
    • Alignment (schematic)

      SEQ ID NO 9
      96.15% cov
      XM_003092079
      96.03% cov
    • Alignment Length
      1,184 bp
    • CIGAR string
      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 mismatches: 188 - insertions: 11 - deletions: 23
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578450
      XM_002644162
    • Hit length
      1,215 bp
    • E Value
      1.74E-152
    • BLAST Score
      549.6 bits
    • Similarity
      77.91%
    • Coverage
      76.39%
    • Alignment (schematic)

      SEQ ID NO 9
      76.39% cov
      XM_002644162
      76.46% cov
    • Alignment Length
      955 bp
    • CIGAR string
      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 mismatches: 162 - insertions: 23 - deletions: 26
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
406
Type
peptide
Locations
Summary

Declared organism:
Homo sapiens

Determined organism:
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:25152230
      NP_509725
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      819.3 bits
    • Similarity
      99.01%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_509725
      100% cov
    • Alignment Length
      406 aa
    • CIGAR string
      370M4D32M mismatches: 0 - insertions: 0 - deletions: 4
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308459621
      XP_003092127
    • Hit length
      402 aa
    • E Value
      0E0
    • BLAST Score
      766.9 bits
    • Similarity
      94.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003092127
      100% cov
    • Alignment Length
      406 aa
    • CIGAR string
      5M4NMNMNM2N2MN2MN19MN4MNM2N5MN128MN14MN26MN10MN48MN4MN36MN16MN3MN8MNM2N8M4D4MNMN25M mismatches: 29 - insertions: 0 - deletions: 4
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:268578451
      XP_002644208
    • Hit length
      404 aa
    • E Value
      2.7E-178
    • BLAST Score
      630.2 bits
    • Similarity
      83.66%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002644208
      100% cov
    • Alignment Length
      410 aa
    • CIGAR string
      5MDNM2NM5NM2NM3N4MN2M4N2M3N3MNMNMNMN2M2N5MN4MN19MN14MN4MN50MN3M2N2MN2M2N3MNMN2MN5M2NM2N2MNM2NMN3M4N3MN2MN3MN4MN9MN9MN20MN22M3NMD2N2M2N2M2N3MN13M2NMN11MN3MN3MN13MN5MNMN2MN4IN7MN4D4MNMNMN2MN20M mismatches: 86 - insertions: 4 - deletions: 6
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder

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