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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
52 sequences found in this patent (in total)

Displaying 1 - 10 of 52 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
3,894
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      7,169.8 bits
    • Similarity
      99.9%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF425297
      100% cov
    • Alignment Length
      3,898 bp
    • CIGAR string
      448MI12MI743MI2405MI286M mismatches: 0 - insertions: 4 - deletions: 0
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      7,131 bits
    • Similarity
      99.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AF425299
      100% cov
    • Alignment Length
      3,895 bp
    • CIGAR string
      135MN71MN994MN15MN423MN2MNMN89MD2MD3MI2MN2147M mismatches: 8 - insertions: 1 - deletions: 2
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
2,947
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Expression vector pGA2

    Expression vector pGA2

    • Public DB hit
      GI:16930602
      AF425298
    • Hit length
      2,947 bp
    • E Value
      0E0
    • BLAST Score
      5,443.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AF425298
      100% cov
    • Alignment Length
      2,947 bp
    • CIGAR string
      2947M mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      4,154.2 bits
    • Similarity
      99.96%
    • Coverage
      76.42%
    • Alignment (schematic)

      SEQ ID NO 2
      76.42% cov
      AF425297
      57.8% cov
    • Alignment Length
      2,253 bp
    • CIGAR string
      695H1966MI286M mismatches: 0 - insertions: 1 - deletions: 0
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      4,124.7 bits
    • Similarity
      99.82%
    • Coverage
      76.21%
    • Alignment (schematic)

      SEQ ID NO 2
      76.21% cov
      AF425299
      57.67% cov
    • Alignment Length
      2,247 bp
    • CIGAR string
      701H89MD2MD3MI2MN2147M mismatches: 1 - insertions: 1 - deletions: 2
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:19352319
      AF426288
      1 of 4 hits reported for synthetic construct.
    • Hit length
      9,542 bp
    • E Value
      0E0
    • BLAST Score
      4,015.7 bits
    • Similarity
      100%
    • Coverage
      73.77%
    • Alignment (schematic)

      SEQ ID NO 2
      73.77% cov
      AF426288
      22.78% cov
    • Alignment Length
      2,174 bp
    • CIGAR string
      773H2174M mismatches: 0 - insertions: 0 - deletions: 0
  • Cloning vector pRama-34

    Cloning vector pRama-34

    • Public DB hit
      GI:254575546
      GQ258349
    • Hit length
      8,361 bp
    • E Value
      0E0
    • BLAST Score
      3,936.3 bits
    • Similarity
      99.86%
    • Coverage
      72.62%
    • Alignment (schematic)

      SEQ ID NO 2
      72.62% cov
      GQ258349
      25.6% cov
    • Alignment Length
      2,141 bp
    • CIGAR string
      807H276MIMDN1861M mismatches: 1 - insertions: 1 - deletions: 1
  • Cloning vector pRama-35

    Cloning vector pRama-35

    • Public DB hit
      GI:254575550
      GQ258350
    • Hit length
      5,312 bp
    • E Value
      0E0
    • BLAST Score
      3,925.3 bits
    • Similarity
      99.77%
    • Coverage
      72.62%
    • Alignment (schematic)

      SEQ ID NO 2
      72.62% cov
      GQ258350
      40.29% cov
    • Alignment Length
      2,142 bp
    • CIGAR string
      807H276MIMDN1815MI4MD41M mismatches: 1 - insertions: 2 - deletions: 2
  • Cloning vector pRama-31

    Cloning vector pRama-31

    • Public DB hit
      GI:254575543
      GQ258348
    • Hit length
      4,828 bp
    • E Value
      0E0
    • BLAST Score
      3,925.3 bits
    • Similarity
      99.77%
    • Coverage
      72.62%
    • Alignment (schematic)

      SEQ ID NO 2
      72.62% cov
      GQ258348
      44.32% cov
    • Alignment Length
      2,142 bp
    • CIGAR string
      807H276MIMDN1815MI4MD41M mismatches: 1 - insertions: 2 - deletions: 2
  • Neurospora knock-in vector p13xMyc::hph::loxP

    Neurospora knock-in vector p13xMyc::hph::loxP

    • Public DB hit
      GI:221229288
      FJ457012
    • Hit length
      5,316 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      FJ457012
      35.01% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Neurospora knock-in vector pGFP::hph::loxP

    Neurospora knock-in vector pGFP::hph::loxP

    • Public DB hit
      GI:221229284
      FJ457011
    • Hit length
      5,504 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      FJ457011
      33.81% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Neurospora knock-in vector p3xHA::hph::loxP

    Neurospora knock-in vector p3xHA::hph::loxP

    • Public DB hit
      GI:221229281
      FJ457010
    • Hit length
      5,147 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      FJ457010
      36.16% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Neurospora knock-in vector p3xFLAG::hph::loxP

    Neurospora knock-in vector p3xFLAG::hph::loxP

    • Public DB hit
      GI:221229278
      FJ457009
    • Hit length
      5,044 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      FJ457009
      36.9% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Cloning vector pZeRO-2T

    Cloning vector pZeRO-2T

    • Public DB hit
      GI:2950219
      Y10545
    • Hit length
      5,025 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      Y10545
      37.03% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Cloning vector pKILHIS-1

    Cloning vector pKILHIS-1

    • Public DB hit
      GI:3892162
      AF028837
    • Hit length
      3,555 bp
    • E Value
      0E0
    • BLAST Score
      3,404.5 bits
    • Similarity
      99.68%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      AF028837
      52.35% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN27M2H mismatches: 6 - insertions: 0 - deletions: 0
  • Cloning vector pKILHIS-2

    Cloning vector pKILHIS-2

    • Public DB hit
      GI:3892165
      AF028838
    • Hit length
      3,616 bp
    • E Value
      0E0
    • BLAST Score
      3,400.8 bits
    • Similarity
      99.68%
    • Coverage
      63.08%
    • Alignment (schematic)

      SEQ ID NO 2
      63.08% cov
      AF028838
      51.41% cov
    • Alignment Length
      1,859 bp
    • CIGAR string
      1084H154MN677MN33MN490MN459MN15MN25M4H mismatches: 6 - insertions: 0 - deletions: 0
  • Cloning vector pZero++ Kan

    Cloning vector pZero++ Kan

    • Public DB hit
      GI:45861225
      AY569777
    • Hit length
      3,356 bp
    • E Value
      0E0
    • BLAST Score
      3,391.6 bits
    • Similarity
      99.57%
    • Coverage
      63.15%
    • Alignment (schematic)

      SEQ ID NO 2
      63.15% cov
      AY569777
      55.42% cov
    • Alignment Length
      1,861 bp
    • CIGAR string
      1084H154MN80MN598MN19MD11MN490MN459MN15MN27M2H mismatches: 7 - insertions: 0 - deletions: 1
  • Cloning vector pTarg2

    Cloning vector pTarg2

    • Public DB hit
      GI:42557817
      AJ430835
    • Hit length
      8,245 bp
    • E Value
      0E0
    • BLAST Score
      3,380.5 bits
    • Similarity
      99.52%
    • Coverage
      63.08%
    • Alignment (schematic)

      SEQ ID NO 2
      63.08% cov
      AJ430835
      22.5% cov
    • Alignment Length
      1,859 bp
    • CIGAR string
      1084H154MN675M2DMDMD30MN490MN459MN15MN25M4H mismatches: 5 - insertions: 0 - deletions: 4
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
3,893
Type
nucleotide
Locations
Claims, Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • Expression vector pGA3

    Expression vector pGA3

    • Public DB hit
      GI:16930604
      AF425299
    • Hit length
      3,893 bp
    • E Value
      0E0
    • BLAST Score
      7,190.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF425299
      100% cov
    • Alignment Length
      3,893 bp
    • CIGAR string
      3893M mismatches: 0 - insertions: 0 - deletions: 0
  • Expression vector pGA1

    Expression vector pGA1

    • Public DB hit
      GI:16930600
      AF425297
    • Hit length
      3,898 bp
    • E Value
      0E0
    • BLAST Score
      7,118.1 bits
    • Similarity
      99.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AF425297
      100% cov
    • Alignment Length
      3,899 bp
    • CIGAR string
      135MN71MN240MI12MI741MI17MN423MN2MNMN89MI2MI3MD2MN1861MI286M mismatches: 7 - insertions: 6 - deletions: 1
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
9,545
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:19352319
      AF426288
      1 of 3 hits reported for synthetic construct.
    • Hit length
      9,542 bp
    • E Value
      0E0
    • BLAST Score
      17,529.5 bits
    • Similarity
      99.82%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AF426288
      100% cov
    • Alignment Length
      9,547 bp
    • CIGAR string
      3650MD227MN1959MN294MNMN1711MN490MN459MN15MN33M2DMDMD129MN63MNMI157MI339M mismatches: 10 - insertions: 2 - deletions: 5
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:326383
      M15654
      1 of 22 hits reported for Human immunodeficiency virus 1.
    • Hit length
      8,932 bp
    • E Value
      0E0
    • BLAST Score
      6,593.7 bits
    • Similarity
      99.53%
    • Coverage
      37.94%
    • Alignment (schematic)

      SEQ ID NO 4
      37.94% cov
      M15654
      40.54% cov
    • Alignment Length
      3,621 bp
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
9,918
Type
nucleotide
Locations
Detailed Description, Drawings

Declared organism:
Artificial

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:16798502
      AF430344
      1 of 3 hits reported for synthetic construct.
    • Hit length
      9,918 bp
    • E Value
      0E0
    • BLAST Score
      18,310.7 bits
    • Similarity
      99.99%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AF430344
      100% cov
    • Alignment Length
      9,918 bp
    • CIGAR string
      5716MN4201M mismatches: 1 - insertions: 0 - deletions: 0
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:326383
      M15654
      1 of 22 hits reported for Human immunodeficiency virus 1.
    • Hit length
      8,932 bp
    • E Value
      0E0
    • BLAST Score
      6,599.2 bits
    • Similarity
      99.56%
    • Coverage
      36.51%
    • Alignment (schematic)

      SEQ ID NO 5
      36.51% cov
      M15654
      40.54% cov
    • Alignment Length
      3,621 bp
    • CIGAR string
      1H4MN1272MNMN6MNMN51MNMN6MNMN1100MNMN240M3N633MN284MN4M6296H mismatches: 16 - insertions: 0 - deletions: 0
Occurrence
9 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
35
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
30
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
30
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
29
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Cloning vector pDBR

    Cloning vector pDBR

    • Public DB hit
      GI:328795281
      FR822201
    • Hit length
      6,619 bp
    • E Value
      7.64E-2
    • BLAST Score
      42.1 bits
    • Similarity
      93.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      FR822201
      0.44% cov
    • Alignment Length
      29 bp
  • Human immunodeficiency virus 1

    Human immunodeficiency virus 1

    • Public DB hit
      GI:325637425
      JF320431
      1 of 20 hits reported for Human immunodeficiency virus 1.
    • Hit length
      9,045 bp
    • E Value
      7.64E-2
    • BLAST Score
      42.1 bits
    • Similarity
      93.1%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      JF320431
      0.32% cov
    • Alignment Length
      29 bp
Occurrence
25 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
31
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
17 times in PatSeqDB
Tools
PatSeq Finder

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