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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank USPTO PSIPS EMBL-EBI Pat
51 sequences found in this patent (in total)

Displaying 1 - 10 of 51 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
100,000
Type
DNA
Locations
Detailed Description, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 20 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      184,666.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AJ421479
      39.66% cov
    • Alignment Length
      100,000 bp
    • CIGAR string
      100000M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:202420
      L04961
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      14,739 bp
    • E Value
      0E0
    • BLAST Score
      17,320.8 bits
    • Similarity
      99.6%
    • Coverage
      9.5%
    • Alignment (schematic)

      SEQ ID NO 1
      9.5% cov
      L04961
      64.34% cov
    • Alignment Length
      9,511 bp
    • CIGAR string
      26312H313MN204M2D171MD2MI8MD3MD370MD1032MD665MD112M6D6M6D226M2D77MD148MI466MD105MD35MN673MD151MI3MI21MI1515MI1112MD33MD321MN1636MI65M64184H mismatches: 3 - insertions: 7 - deletions: 28
  • Mus musculus castaneus

    Mus musculus castaneus

    • Public DB hit
      GI:29500503
      AY190762
    • Hit length
      12,801 bp
    • E Value
      0E0
    • BLAST Score
      8,263 bits
    • Similarity
      98.74%
    • Coverage
      4.66%
    • Alignment (schematic)

      SEQ ID NO 1
      4.66% cov
      AY190762
      36.24% cov
    • Alignment Length
      4,669 bp
    • CIGAR string
      69999H35MN370MN838MN25MNI66MN162MN152MN19MD4M3D190MI203MN21MN28MN165M4D50MN47MD2M8D4MD2M6DMD2M5D169MN205MN176MN21MN641MN109MN21MN58M3I29MN305MN39MN116MN101MN6MN228M25337H mismatches: 24 - insertions: 5 - deletions: 30
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
82,845
Type
DNA
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 20 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      152,986.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AJ421479
      32.86% cov
    • Alignment Length
      82,845 bp
    • CIGAR string
      82845M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:202420
      L04961
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      14,739 bp
    • E Value
      0E0
    • BLAST Score
      17,320.8 bits
    • Similarity
      99.6%
    • Coverage
      11.47%
    • Alignment (schematic)

      SEQ ID NO 2
      11.47% cov
      L04961
      64.34% cov
    • Alignment Length
      9,511 bp
  • Mus musculus castaneus

    Mus musculus castaneus

    • Public DB hit
      GI:29500503
      AY190762
    • Hit length
      12,801 bp
    • E Value
      0E0
    • BLAST Score
      8,263 bits
    • Similarity
      98.74%
    • Coverage
      5.63%
    • Alignment (schematic)

      SEQ ID NO 2
      5.63% cov
      AY190762
      36.24% cov
    • Alignment Length
      4,669 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
82,845
Type
DNA
Locations
Detailed Description, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 20 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      152,986.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AJ421479
      32.86% cov
    • Alignment Length
      82,845 bp
    • CIGAR string
      82845M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:202420
      L04961
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      14,739 bp
    • E Value
      0E0
    • BLAST Score
      17,320.8 bits
    • Similarity
      99.6%
    • Coverage
      11.47%
    • Alignment (schematic)

      SEQ ID NO 3
      11.47% cov
      L04961
      64.34% cov
    • Alignment Length
      9,511 bp
  • Mus musculus castaneus

    Mus musculus castaneus

    • Public DB hit
      GI:29500503
      AY190762
    • Hit length
      12,801 bp
    • E Value
      0E0
    • BLAST Score
      8,263 bits
    • Similarity
      98.74%
    • Coverage
      5.63%
    • Alignment (schematic)

      SEQ ID NO 3
      5.63% cov
      AY190762
      36.24% cov
    • Alignment Length
      4,669 bp
  • Mus musculus musculus x M. m. castaneus

    Mus musculus musculus x M. m. castaneus

    • Public DB hit
      GI:210076757
      FJ361197
    • Hit length
      1,630 bp
    • E Value
      0E0
    • BLAST Score
      3,011.2 bits
    • Similarity
      100%
    • Coverage
      1.97%
    • Alignment (schematic)

      SEQ ID NO 3
      1.97% cov
      FJ361197
      100% cov
    • Alignment Length
      1,630 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
19,450
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 22 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      35,918.5 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AJ421479
      7.71% cov
    • Alignment Length
      19,450 bp
    • CIGAR string
      19450M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus castaneus

    Mus musculus castaneus

    • Public DB hit
      GI:29500503
      AY190762
    • Hit length
      12,801 bp
    • E Value
      0E0
    • BLAST Score
      5,461.7 bits
    • Similarity
      98.49%
    • Coverage
      16%
    • Alignment (schematic)

      SEQ ID NO 4
      16% cov
      AY190762
      24.09% cov
    • Alignment Length
      3,114 bp
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:13469702
      AF138745
    • Hit length
      4,300 bp
    • E Value
      3.59E-170
    • BLAST Score
      612.4 bits
    • Similarity
      100%
    • Coverage
      1.7%
    • Alignment (schematic)

      SEQ ID NO 4
      1.7% cov
      AF138745
      7.7% cov
    • Alignment Length
      331 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
5,074
Type
DNA
Locations
Detailed Description, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 23 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      9,371 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      AJ421479
      2.01% cov
    • Alignment Length
      5,074 bp
    • CIGAR string
      5074M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:291327552
      AC142003
    • Hit length
      180,990 bp
    • E Value
      1.4E-64
    • BLAST Score
      259.7 bits
    • Similarity
      89.15%
    • Coverage
      4.12%
    • Alignment (schematic)

      SEQ ID NO 5
      4.12% cov
      AC142003
      0.12% cov
    • Alignment Length
      212 bp
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:251821137
      CU633890
    • Hit length
      198,518 bp
    • E Value
      1.81E-63
    • BLAST Score
      256 bits
    • Similarity
      88.53%
    • Coverage
      4.14%
    • Alignment (schematic)

      SEQ ID NO 5
      4.14% cov
      CU633890
      0.11% cov
    • Alignment Length
      218 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
43,014
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:21425583
      AJ421479
      1 of 20 hits reported for Mus musculus.
    • Hit length
      252,150 bp
    • E Value
      0E0
    • BLAST Score
      33,218.7 bits
    • Similarity
      98.73%
    • Coverage
      43.45%
    • Alignment (schematic)

      SEQ ID NO 6
      43.45% cov
      AJ421479
      7.42% cov
    • Alignment Length
      18,724 bp
    • CIGAR string
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mismatches: 187 - insertions: 34 - deletions: 16
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:202420
      L04961
      1 of 2 hits reported for Mus musculus domesticus.
    • Hit length
      14,739 bp
    • E Value
      0E0
    • BLAST Score
      17,512.9 bits
    • Similarity
      100%
    • Coverage
      22.05%
    • Alignment (schematic)

      SEQ ID NO 6
      22.05% cov
      L04961
      64.34% cov
    • Alignment Length
      9,483 bp
  • Mus musculus castaneus

    Mus musculus castaneus

    • Public DB hit
      GI:89255270
      AB241552
    • Hit length
      2,786 bp
    • E Value
      0E0
    • BLAST Score
      4,619.6 bits
    • Similarity
      97.28%
    • Coverage
      6.3%
    • Alignment (schematic)

      SEQ ID NO 6
      6.3% cov
      AB241552
      98.38% cov
    • Alignment Length
      2,753 bp
  • Mus musculus musculus x M. m. castaneus

    Mus musculus musculus x M. m. castaneus

    • Public DB hit
      GI:210076757
      FJ361197
    • Hit length
      1,630 bp
    • E Value
      0E0
    • BLAST Score
      2,966.8 bits
    • Similarity
      99.57%
    • Coverage
      3.78%
    • Alignment (schematic)

      SEQ ID NO 6
      3.78% cov
      FJ361197
      100% cov
    • Alignment Length
      1,631 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
4,929
Type
DNA
Locations
Drawings, Summary

Declared organism:
Mus musculus

Determined organism:
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:164519100
      NR_001463
      1 of 6 hits reported for Mus musculus.
    • Hit length
      17,918 bp
    • E Value
      0E0
    • BLAST Score
      9,103.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NR_001463
      27.51% cov
    • Alignment Length
      4,929 bp
    • CIGAR string
      4929M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus domesticus

    Mus musculus domesticus

    • Public DB hit
      GI:202420
      L04961
    • Hit length
      14,739 bp
    • E Value
      0E0
    • BLAST Score
      6,791.3 bits
    • Similarity
      99.41%
    • Coverage
      75.96%
    • Alignment (schematic)

      SEQ ID NO 7
      75.96% cov
      L04961
      25.4% cov
    • Alignment Length
      3,747 bp
Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
4,800
Type
DNA
Locations
Drawings, Summary

Declared organism:
Mus musculus

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
4,317
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
3,695
Type
DNA
Locations
Detailed Description, Drawings, Summary

Declared organism:
Mus musculus

Occurrence
5 times in PatSeqDB
Tools
PatSeq Finder

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