Methods For Determining Sensitivity To Microtubule-stabilizing Agents Comprising Ixabepilone By Measuring The Level Of Estrogen Receptor 1

Data obtained from: NCBI GenBank DDBJ Pat EMBL-EBI Pat USPTO PSIPS
395 sequences found in this patent (in total)

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Displaying 1 - 10 of 395 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
1,880
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34784915
      BC056908
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      1,880 bp
    • E Value
      0E0
    • BLAST Score
      3,472.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BC056908
      100% cov
    • Alignment Length
      1,880 bp
    • CIGAR string
      1880M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822945
      XM_001162147
    • Hit length
      1,734 bp
    • E Value
      0E0
    • BLAST Score
      3,064.7 bits
    • Similarity
      98.89%
    • Coverage
      91.28%
    • Alignment (schematic)

      SEQ ID NO 1
      91.28% cov
      XM_001162147
      99.02% cov
    • Alignment Length
      1,719 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677036
      XM_002816374
    • Hit length
      2,177 bp
    • E Value
      0E0
    • BLAST Score
      3,003.8 bits
    • Similarity
      95.78%
    • Coverage
      99.1%
    • Alignment (schematic)

      SEQ ID NO 1
      99.1% cov
      XM_002816374
      85.58% cov
    • Alignment Length
      1,872 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246163
      XM_003272171
    • Hit length
      2,008 bp
    • E Value
      0E0
    • BLAST Score
      2,342.7 bits
    • Similarity
      95.99%
    • Coverage
      76.65%
    • Alignment (schematic)

      SEQ ID NO 1
      76.65% cov
      XM_003272171
      71.86% cov
    • Alignment Length
      1,446 bp
Occurrence
23 times in PatSeqDB
Tools
SEQ ID NO
2
Length
1,539
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:2125811
      Y11651
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,539 bp
    • E Value
      0E0
    • BLAST Score
      2,843.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Y11651
      100% cov
    • Alignment Length
      1,539 bp
    • CIGAR string
      1539M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332809625
      XM_001160984
    • Hit length
      1,555 bp
    • E Value
      0E0
    • BLAST Score
      2,704.6 bits
    • Similarity
      99.07%
    • Coverage
      97.86%
    • Alignment (schematic)

      SEQ ID NO 2
      97.86% cov
      XM_001160984
      96.85% cov
    • Alignment Length
      1,506 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332222019
      XM_003260114
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      2,570 bp
    • E Value
      0E0
    • BLAST Score
      2,697.2 bits
    • Similarity
      98.31%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 2
      99.94% cov
      XM_003260114
      59.84% cov
    • Alignment Length
      1,538 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297664334
      XM_002810557
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      2,442 bp
    • E Value
      0E0
    • BLAST Score
      2,686.1 bits
    • Similarity
      98.18%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 2
      99.94% cov
      XM_002810557
      62.98% cov
    • Alignment Length
      1,538 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297279365
      XM_001107617
    • Hit length
      1,596 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      97.02%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 2
      99.94% cov
      XM_001107617
      96.55% cov
    • Alignment Length
      1,542 bp
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:67971969
      AB179276
    • Hit length
      1,519 bp
    • E Value
      0E0
    • BLAST Score
      2,540.3 bits
    • Similarity
      97.21%
    • Coverage
      97.47%
    • Alignment (schematic)

      SEQ ID NO 2
      97.47% cov
      AB179276
      98.88% cov
    • Alignment Length
      1,504 bp
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296208632
      XM_002751137
    • Hit length
      1,541 bp
    • E Value
      0E0
    • BLAST Score
      2,442.4 bits
    • Similarity
      95.32%
    • Coverage
      99.94%
    • Alignment (schematic)

      SEQ ID NO 2
      99.94% cov
      XM_002751137
      99.87% cov
    • Alignment Length
      1,540 bp
Occurrence
68 times in PatSeqDB
Tools
SEQ ID NO
3
Length
890
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:257195180
      NM_014164
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      914 bp
    • E Value
      0E0
    • BLAST Score
      1,644.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NM_014164
      97.37% cov
    • Alignment Length
      890 bp
    • CIGAR string
      890M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332854896
      XM_003316269
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      815 bp
    • E Value
      0E0
    • BLAST Score
      1,439.7 bits
    • Similarity
      98.65%
    • Coverage
      91.24%
    • Alignment (schematic)

      SEQ ID NO 3
      91.24% cov
      XM_003316269
      99.63% cov
    • Alignment Length
      812 bp
Occurrence
30 times in PatSeqDB
Tools
SEQ ID NO
4
Length
2,855
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:38327550
      NM_005754
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      2,855 bp
    • E Value
      0E0
    • BLAST Score
      5,273.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_005754
      100% cov
    • Alignment Length
      2,855 bp
    • CIGAR string
      2855M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332822454
      XM_001169085
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      9,071 bp
    • E Value
      0E0
    • BLAST Score
      5,149.6 bits
    • Similarity
      99.47%
    • Coverage
      99.3%
    • Alignment (schematic)

      SEQ ID NO 4
      99.3% cov
      XM_001169085
      31.22% cov
    • Alignment Length
      2,836 bp
    • CIGAR string
      45MN22MNMN5MN640MN337MN8MN761MD54MD29MN138MN132MD10MD224MI41MN374M20H mismatches: 10 - insertions: 1 - deletions: 4
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197097937
      NM_001132090
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      2,794 bp
    • E Value
      0E0
    • BLAST Score
      4,972.3 bits
    • Similarity
      98.72%
    • Coverage
      98.32%
    • Alignment (schematic)

      SEQ ID NO 4
      98.32% cov
      NM_001132090
      100% cov
    • Alignment Length
      2,808 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297295505
      XM_001110695
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      3,319 bp
    • E Value
      0E0
    • BLAST Score
      4,567.9 bits
    • Similarity
      97.41%
    • Coverage
      94.01%
    • Alignment (schematic)

      SEQ ID NO 4
      94.01% cov
      XM_001110695
      80.81% cov
    • Alignment Length
      2,700 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332254996
      XM_003276574
    • Hit length
      3,881 bp
    • E Value
      0E0
    • BLAST Score
      3,808.9 bits
    • Similarity
      98.65%
    • Coverage
      75.34%
    • Alignment (schematic)

      SEQ ID NO 4
      75.34% cov
      XM_003276574
      55.35% cov
    • Alignment Length
      2,154 bp
Occurrence
25 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,578
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:315139017
      NM_000801
      1 of 21 hits reported for Homo sapiens.
    • Hit length
      1,643 bp
    • E Value
      0E0
    • BLAST Score
      2,893 bits
    • Similarity
      99.87%
    • Coverage
      99.62%
    • Alignment (schematic)

      SEQ ID NO 5
      99.62% cov
      NM_000801
      95.68% cov
    • Alignment Length
      1,572 bp
    • CIGAR string
      510MN1050MN10M6H mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332857866
      XM_001167897
    • Hit length
      1,602 bp
    • E Value
      0E0
    • BLAST Score
      2,809.9 bits
    • Similarity
      99.17%
    • Coverage
      98.92%
    • Alignment (schematic)

      SEQ ID NO 5
      98.92% cov
      XM_001167897
      97.38% cov
    • Alignment Length
      1,562 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332248682
      XM_003273446
    • Hit length
      1,568 bp
    • E Value
      0E0
    • BLAST Score
      2,610.4 bits
    • Similarity
      97.05%
    • Coverage
      97.97%
    • Alignment (schematic)

      SEQ ID NO 5
      97.97% cov
      XM_003273446
      99.23% cov
    • Alignment Length
      1,561 bp
Occurrence
63 times in PatSeqDB
Tools
SEQ ID NO
6
Length
4,092
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:94538367
      NM_006295
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      4,308 bp
    • E Value
      0E0
    • BLAST Score
      7,552.1 bits
    • Similarity
      99.98%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_006295
      94.99% cov
    • Alignment Length
      4,092 bp
    • CIGAR string
      2845MN1246M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114606510
      XM_518361
    • Hit length
      4,312 bp
    • E Value
      0E0
    • BLAST Score
      7,452.4 bits
    • Similarity
      99.54%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_518361
      94.9% cov
    • Alignment Length
      4,092 bp
    • CIGAR string
      228MN1071MN221MN96MN298MN135MN163MN215MN164MN65MN23MN155MN33MN85MN43MN408MN314MN98MN43MN215M mismatches: 19 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246065
      XM_003272123
    • Hit length
      4,294 bp
    • E Value
      0E0
    • BLAST Score
      7,142.1 bits
    • Similarity
      98.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_003272123
      95.3% cov
    • Alignment Length
      4,092 bp
    • CIGAR string
      10MN32MN4MN17MNMN35MN4MN26MN46MN26MN17MN97MN25MN197MN20MN107MN85MN66MN9MN54MN159MN47MN119MN29MN26MN2MN179MN56MN275MN129MN22MN50MN14MN24MN30MN15MN8MN233MN56MN46MN33MN32MN29MN65MN52MN12MN23MN8MN80MN98M2N7MN77MN2MN40MN36MN287MN11MN118MN99MN122MN46MN6MN2MN17MN50MN23MN50MN11MN14MN41MN11MN11MN8MN5MN94M mismatches: 75 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297677729
      XM_002816661
    • Hit length
      4,326 bp
    • E Value
      0E0
    • BLAST Score
      7,046.1 bits
    • Similarity
      97.69%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XM_002816661
      94.94% cov
    • Alignment Length
      4,112 bp
    • CIGAR string
      15MN93MN100MN17MN123MN59MN329MN56MN32MN163MN97MN56MN34MN68MN26MN2MN8MN128MN29MN68MN96MN178MN110MN11MN95MN71MN176MN221MN22MN87MN11MN36MN16MN23MN20MN134MN33MN97MN31MN42MN140MN21MN11MD3MNI3MN12MD2MDMI3MNMNMI3MNIM2N3MDMNI4M4I2M2IM4I5MN4MDM2N3MIMIMN2IMI45MN36MN142MN143MN17MN20MN2MN41MN8MN29MN44MN50MN11MN68MN11MN53MN55M mismatches: 70 - insertions: 20 - deletions: 5
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296197730
      XM_002746356
    • Hit length
      3,954 bp
    • E Value
      0E0
    • BLAST Score
      6,244.6 bits
    • Similarity
      95.17%
    • Coverage
      96.65%
    • Alignment (schematic)

      SEQ ID NO 6
      96.65% cov
      XM_002746356
      100% cov
    • Alignment Length
      3,957 bp
    • CIGAR string
      137H8MN58MN5M2N16MN22MNMN20MN38MN26MN11MN60MN7MN70MN9MN2MN23MN9MN19MN11MN11MN4MN12MN44MN62MN2MN29MN26MN26MN10MN18MN5MN23MN8MN8MN17MN5MN50MN71MN26MN29MN59MN80MN35MN32MN59MN20MN5MN8MN8MN11MN17MN41MN8MN119MN14MN8M2N83MN7MN14MN17MN11MN77MN111MN16MN8MN44MN23MN42MN4MN23MN20MN2MN20MN20MN47MN32MN8MN20MN2MN2MN5MN5MN7MN27MN29MN44MN5MN4MN5MN9MN23MN23MN2MN5MN7MN9MN32MN59MN5MN44MN17MN5MN41MN17MN32MN14MN2MN51MNMN3MN19M2N22MN8MN17MN35MN2MN40MN6MN26MN26MN23MN8MN5MN10MN9MN86MN47MN26MN17MN19MN42MN8MN8MN2MN8MN2MN17MN17MN5MN7MN24M2N6M2N14MN20MN17MN14MN6MN4MN11MN5MN8MN38MN14MN3MN3M2N2MN2MN20MN8MN2MN11MN2MN23MN14MN2MN5MN29MN6MN10MN2MIMD8MN17MN10MN41MN5MN12MI2MN2MD122MN5MN3MN4M2N3MD29M mismatches: 186 - insertions: 2 - deletions: 3
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290464
      XM_001105797
    • Hit length
      4,021 bp
    • E Value
      0E0
    • BLAST Score
      5,456.1 bits
    • Similarity
      98.15%
    • Coverage
      76.42%
    • Alignment (schematic)

      SEQ ID NO 6
      76.42% cov
      XM_001105797
      77.84% cov
    • Alignment Length
      3,130 bp
    • CIGAR string
      20H28MN33MN26MN6MN48MN7MN21MN14MN17MN123MN65MN27MN5MN10MN11MN20MN8MN74MN54MN55MN134MN5MN8MN14MN33MN107MN2MI3MIMI250MN29MN41MN95MN41MN56MN95M2N178MN173MN44MN71MN26MN60MN130MN161MN26MN101MN23MN41MN17MN5MN155MN12MN20MN7MN77MN2MN40MN137M945H mismatches: 55 - insertions: 3 - deletions: 0
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:194223355
      XM_001491721
    • Hit length
      3,872 bp
    • E Value
      0E0
    • BLAST Score
      5,350.9 bits
    • Similarity
      91.64%
    • Coverage
      94.62%
    • Alignment (schematic)

      SEQ ID NO 6
      94.62% cov
      XM_001491721
      100% cov
    • Alignment Length
      3,887 bp
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301792291
      XM_002931067
    • Hit length
      3,872 bp
    • E Value
      0E0
    • BLAST Score
      5,097.9 bits
    • Similarity
      90.48%
    • Coverage
      94.57%
    • Alignment (schematic)

      SEQ ID NO 6
      94.57% cov
      XM_002931067
      99.97% cov
    • Alignment Length
      3,888 bp
  • Sus scrofa

    Sus scrofa

    • Public DB hit
      GI:305855129
      NM_001195378
    • Hit length
      4,253 bp
    • E Value
      0E0
    • BLAST Score
      4,913.2 bits
    • Similarity
      89.87%
    • Coverage
      93.55%
    • Alignment (schematic)

      SEQ ID NO 6
      93.55% cov
      NM_001195378
      90.1% cov
    • Alignment Length
      3,849 bp
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:31565369
      BC053703
      1 of 3 hits reported for Mus musculus.
    • Hit length
      4,021 bp
    • E Value
      0E0
    • BLAST Score
      4,501.4 bits
    • Similarity
      87.66%
    • Coverage
      95.11%
    • Alignment (schematic)

      SEQ ID NO 6
      95.11% cov
      BC053703
      96.64% cov
    • Alignment Length
      3,921 bp
Occurrence
41 times in PatSeqDB
Tools
SEQ ID NO
7
Length
1,578
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:315139017
      NM_000801
      1 of 21 hits reported for Homo sapiens.
    • Hit length
      1,643 bp
    • E Value
      0E0
    • BLAST Score
      2,893 bits
    • Similarity
      99.87%
    • Coverage
      99.62%
    • Alignment (schematic)

      SEQ ID NO 7
      99.62% cov
      NM_000801
      95.68% cov
    • Alignment Length
      1,572 bp
    • CIGAR string
      510MN1050MN10M6H mismatches: 2 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332857866
      XM_001167897
    • Hit length
      1,602 bp
    • E Value
      0E0
    • BLAST Score
      2,809.9 bits
    • Similarity
      99.17%
    • Coverage
      98.92%
    • Alignment (schematic)

      SEQ ID NO 7
      98.92% cov
      XM_001167897
      97.38% cov
    • Alignment Length
      1,562 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332248682
      XM_003273446
    • Hit length
      1,568 bp
    • E Value
      0E0
    • BLAST Score
      2,610.4 bits
    • Similarity
      97.05%
    • Coverage
      97.97%
    • Alignment (schematic)

      SEQ ID NO 7
      97.97% cov
      XM_003273446
      99.23% cov
    • Alignment Length
      1,561 bp
Occurrence
63 times in PatSeqDB
Tools
SEQ ID NO
8
Length
4,493
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:219842304
      NM_016156
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      4,603 bp
    • E Value
      0E0
    • BLAST Score
      8,298.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NM_016156
      97.61% cov
    • Alignment Length
      4,493 bp
    • CIGAR string
      4493M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114639939
      XM_508710
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      4,775 bp
    • E Value
      0E0
    • BLAST Score
      8,157.8 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XM_508710
      94.07% cov
    • Alignment Length
      4,498 bp
    • CIGAR string
      134MN314MN833MN1284MN72MN40MN45MN64MN11MN133MN23MN46MD4M3D259M3I3MI39MI38MN17MN293M2D508MN313M mismatches: 14 - insertions: 5 - deletions: 6
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:197102744
      NM_001133737
    • Hit length
      4,635 bp
    • E Value
      0E0
    • BLAST Score
      7,818 bits
    • Similarity
      98.03%
    • Coverage
      99.98%
    • Alignment (schematic)

      SEQ ID NO 8
      99.98% cov
      NM_001133737
      97.26% cov
    • Alignment Length
      4,510 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297269010
      XM_001092784
      1 of 6 hits reported for Macaca mulatta.
    • Hit length
      4,640 bp
    • E Value
      0E0
    • BLAST Score
      7,265.8 bits
    • Similarity
      96.02%
    • Coverage
      99.96%
    • Alignment (schematic)

      SEQ ID NO 8
      99.96% cov
      XM_001092784
      95.93% cov
    • Alignment Length
      4,501 bp
Occurrence
22 times in PatSeqDB
Tools
SEQ ID NO
9
Length
1,370
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:73747873
      NM_004159
      1 of 9 hits reported for Homo sapiens.
    • Hit length
      1,602 bp
    • E Value
      0E0
    • BLAST Score
      2,531 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NM_004159
      85.52% cov
    • Alignment Length
      1,370 bp
    • CIGAR string
      1370M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332823717
      XM_001167241
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      1,627 bp
    • E Value
      0E0
    • BLAST Score
      2,388.8 bits
    • Similarity
      98.59%
    • Coverage
      98.54%
    • Alignment (schematic)

      SEQ ID NO 9
      98.54% cov
      XM_001167241
      82.97% cov
    • Alignment Length
      1,350 bp
    • CIGAR string
      30MN77MN27MN29MN55MN52MN85MN14MN259MN39MN113MN209MN59MN86MN20MN15MN22MN16MN22MN102M20H mismatches: 19 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297661234
      XM_002809125
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,562 bp
    • E Value
      0E0
    • BLAST Score
      2,220.8 bits
    • Similarity
      97.9%
    • Coverage
      93.65%
    • Alignment (schematic)

      SEQ ID NO 9
      93.65% cov
      XM_002809125
      82.14% cov
    • Alignment Length
      1,283 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332246134
      XM_003272157
    • Hit length
      1,109 bp
    • E Value
      0E0
    • BLAST Score
      1,568.9 bits
    • Similarity
      97.2%
    • Coverage
      67.66%
    • Alignment (schematic)

      SEQ ID NO 9
      67.66% cov
      XM_003272157
      83.59% cov
    • Alignment Length
      927 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297290550
      XM_001115562
    • Hit length
      1,145 bp
    • E Value
      0E0
    • BLAST Score
      1,559.7 bits
    • Similarity
      97.09%
    • Coverage
      67.66%
    • Alignment (schematic)

      SEQ ID NO 9
      67.66% cov
      XM_001115562
      80.61% cov
    • Alignment Length
      927 bp
Occurrence
9 times in PatSeqDB
Tools
SEQ ID NO
10
Length
1,904
Sequence Type
DNA
Locations
Detailed Description
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:189083843
      NM_001814
      1 of 22 hits reported for Homo sapiens.
    • Hit length
      1,924 bp
    • E Value
      0E0
    • BLAST Score
      3,517.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NM_001814
      98.96% cov
    • Alignment Length
      1,904 bp
    • CIGAR string
      1904M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114639715
      XM_508684
    • Hit length
      1,928 bp
    • E Value
      0E0
    • BLAST Score
      3,439.6 bits
    • Similarity
      99.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_508684
      98.76% cov
    • Alignment Length
      1,904 bp
Occurrence
104 times in PatSeqDB
Tools

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