Use Of Prion Conversion Modulating Agents

  • Published: Oct 6, 2009
  • Earliest Priority: Jun 19 2003
  • Family: 17
  • Cited Works: 41
  • Cited by: 0
  • Cites: 20
  • Sequences: 6
  • Additional Info: Cited Works Full text
Data obtained from: EMBL-EBI Pat DDBJ Pat USPTO Fulltext NCBI GenBank
6 sequences found in this patent (in total)

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Download sequences in fasta format: 3 peptides 3 nucleotides

Displaying 6 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
4,563
Sequence Type
peptide
Locations
Summary
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:34331
      CAA28191
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      4,563 aa
    • E Value
      0E0
    • BLAST Score
      9,408.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CAA28191
      100% cov
    • Alignment Length
      4,563 aa
    • CIGAR string
      4563M mismatches: 0 - insertions: 0 - deletions: 0
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:306921627
      BAJ17893
    • Hit length
      4,563 aa
    • E Value
      0E0
    • BLAST Score
      9,382.7 bits
    • Similarity
      99.8%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      BAJ17893
      100% cov
    • Alignment Length
      4,563 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114576391
      XP_515323
    • Hit length
      4,562 aa
    • E Value
      0E0
    • BLAST Score
      9,180.1 bits
    • Similarity
      99.21%
    • Coverage
      99.41%
    • Alignment (schematic)

      SEQ ID NO 1
      99.41% cov
      XP_515323
      99.43% cov
    • Alignment Length
      4,536 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332242896
      XP_003270616
    • Hit length
      4,559 aa
    • E Value
      0E0
    • BLAST Score
      9,010.2 bits
    • Similarity
      98.17%
    • Coverage
      99.41%
    • Alignment (schematic)

      SEQ ID NO 1
      99.41% cov
      XP_003270616
      99.5% cov
    • Alignment Length
      4,536 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109102154
      XP_001097500
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      4,555 aa
    • E Value
      0E0
    • BLAST Score
      8,828 bits
    • Similarity
      97.13%
    • Coverage
      99.41%
    • Alignment (schematic)

      SEQ ID NO 1
      99.41% cov
      XP_001097500
      99.5% cov
    • Alignment Length
      4,536 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296224396
      XP_002758016
    • Hit length
      4,587 aa
    • E Value
      0E0
    • BLAST Score
      8,337.2 bits
    • Similarity
      94.03%
    • Coverage
      99.47%
    • Alignment (schematic)

      SEQ ID NO 1
      99.47% cov
      XP_002758016
      98.87% cov
    • Alignment Length
      4,539 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149728117
      XP_001501729
    • Hit length
      4,597 aa
    • E Value
      0E0
    • BLAST Score
      7,294.1 bits
    • Similarity
      87.27%
    • Coverage
      99.39%
    • Alignment (schematic)

      SEQ ID NO 1
      99.39% cov
      XP_001501729
      98.76% cov
    • Alignment Length
      4,549 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297668101
      XP_002812292
    • Hit length
      3,624 aa
    • E Value
      0E0
    • BLAST Score
      7,238.3 bits
    • Similarity
      98.45%
    • Coverage
      79.42%
    • Alignment (schematic)

      SEQ ID NO 1
      79.42% cov
      XP_002812292
      100% cov
    • Alignment Length
      3,624 aa
Occurrence
87 times in PatSeqDB
Tools
SEQ ID NO
2
Length
317
Sequence Type
peptide
Locations
Summary
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4557325
      NP_000032
      1 of 4 hits reported for Homo sapiens.
    • Hit length
      317 aa
    • E Value
      1.41E-174
    • BLAST Score
      617.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_000032
      100% cov
    • Alignment Length
      317 aa
    • CIGAR string
      317M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo pygmaeus

    Pongo pygmaeus

    • Public DB hit
      GI:48427898
      Q9GLM7
    • Hit length
      317 aa
    • E Value
      3.53E-163
    • BLAST Score
      579.3 bits
    • Similarity
      98.42%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Q9GLM7
      100% cov
    • Alignment Length
      317 aa
  • Gorilla gorilla gorilla

    Gorilla gorilla gorilla

    • Public DB hit
      GI:48427899
      Q9GLM8
    • Hit length
      317 aa
    • E Value
      5.45E-163
    • BLAST Score
      578.6 bits
    • Similarity
      98.11%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Q9GLM8
      100% cov
    • Alignment Length
      317 aa
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:57113897
      NP_001009007
    • Hit length
      317 aa
    • E Value
      1.13E-162
    • BLAST Score
      577.8 bits
    • Similarity
      97.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001009007
      100% cov
    • Alignment Length
      317 aa
  • Hylobates lar

    Hylobates lar

    • Public DB hit
      GI:48427897
      Q9GLM6
    • Hit length
      317 aa
    • E Value
      4.74E-161
    • BLAST Score
      572.4 bits
    • Similarity
      97.79%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Q9GLM6
      100% cov
    • Alignment Length
      317 aa
  • Papio anubis

    Papio anubis

    • Public DB hit
      GI:114042
      P05770
    • Hit length
      317 aa
    • E Value
      2.03E-154
    • BLAST Score
      550.1 bits
    • Similarity
      94.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      P05770
      100% cov
    • Alignment Length
      317 aa
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:126143532
      BAF47380
      1 of 2 hits reported for Macaca fascicularis.
    • Hit length
      317 aa
    • E Value
      8.51E-154
    • BLAST Score
      548.1 bits
    • Similarity
      94.32%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BAF47380
      100% cov
    • Alignment Length
      317 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297705109
      XP_002829426
    • Hit length
      307 aa
    • E Value
      1.31E-152
    • BLAST Score
      544.3 bits
    • Similarity
      96.73%
    • Coverage
      96.53%
    • Alignment (schematic)

      SEQ ID NO 2
      96.53% cov
      XP_002829426
      99.67% cov
    • Alignment Length
      306 aa
  • Callithrix jacchus

    Callithrix jacchus

    • Public DB hit
      GI:296234066
      XP_002762273
    • Hit length
      320 aa
    • E Value
      5.44E-145
    • BLAST Score
      518.8 bits
    • Similarity
      92.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002762273
      100% cov
    • Alignment Length
      320 aa
  • Tupaia glis

    Tupaia glis

    • Public DB hit
      GI:60391726
      Q9GLC0
    • Hit length
      313 aa
    • E Value
      1.74E-134
    • BLAST Score
      484.2 bits
    • Similarity
      88.64%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      Q9GLC0
      100% cov
    • Alignment Length
      317 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:309109
      AAA37251
      1 of 6 hits reported for Mus musculus.
    • Hit length
      311 aa
    • E Value
      1.42E-122
    • BLAST Score
      444.5 bits
    • Similarity
      82.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAA37251
      100% cov
    • Alignment Length
      319 aa
Occurrence
439 times in PatSeqDB
Tools
SEQ ID NO
3
Length
11
Sequence Type
peptide
Locations
Claims, Detailed Description
Declared organism
Artificial
Determined organism
  • Macaca fascicularis

    Macaca fascicularis

    • Public DB hit
      GI:930126
      CAA33755
    • Hit length
      596 aa
    • E Value
      3.08E-1
    • BLAST Score
      38 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CAA33755
      1.85% cov
    • Alignment Length
      11 aa
    • CIGAR string
      11M mismatches: 0 - insertions: 0 - deletions: 0
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:74184767
      BAE27983
      1 of 3 hits reported for Mus musculus.
    • Hit length
      1,495 aa
    • E Value
      5.1E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      BAE27983
      0.74% cov
    • Alignment Length
      11 aa
    • CIGAR string
      11M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119621207
      EAX00802
      1 of 11 hits reported for Homo sapiens.
    • Hit length
      3,000 aa
    • E Value
      5.34E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      EAX00802
      0.37% cov
    • Alignment Length
      11 aa
    • CIGAR string
      11M mismatches: 0 - insertions: 0 - deletions: 0
  • Ailuropoda melanoleuca

    Ailuropoda melanoleuca

    • Public DB hit
      GI:301789475
      XP_002930154
      1 of 2 hits reported for Ailuropoda melanoleuca.
    • Hit length
      4,442 aa
    • E Value
      5.69E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002930154
      0.25% cov
    • Alignment Length
      11 aa
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:229442249
      AAI72788
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,275 aa
    • E Value
      6.02E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAI72788
      0.86% cov
    • Alignment Length
      11 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297668101
      XP_002812292
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      3,624 aa
    • E Value
      6.42E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002812292
      0.3% cov
    • Alignment Length
      11 aa
  • Oryctolagus cuniculus

    Oryctolagus cuniculus

    • Public DB hit
      GI:291387156
      XP_002710102
      1 of 2 hits reported for Oryctolagus cuniculus.
    • Hit length
      4,548 aa
    • E Value
      6.42E-1
    • BLAST Score
      37.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002710102
      0.24% cov
    • Alignment Length
      11 aa
Occurrence
36 times in PatSeqDB
Tools
SEQ ID NO
4
Length
22
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:187960117
      NM_011170
      1 of 18 hits reported for Mus musculus.
    • Hit length
      2,206 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_011170
      1% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:30039678
      NM_012631
      1 of 7 hits reported for Rattus norvegicus.
    • Hit length
      2,142 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NM_012631
      1.03% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
5
Length
22
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:187960117
      NM_011170
      1 of 21 hits reported for Mus musculus.
    • Hit length
      2,206 bp
    • E Value
      6.44E-3
    • BLAST Score
      44.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NM_011170
      1% cov
    • Alignment Length
      22 bp
    • CIGAR string
      22M mismatches: 0 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:32328943
      AC010282
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      191,131 bp
    • E Value
      1.01E-1
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      90.91%
    • Alignment (schematic)

      SEQ ID NO 5
      90.91% cov
      AC010282
      0.01% cov
    • Alignment Length
      20 bp
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
6
Length
20
Sequence Type
nucleotide
Locations
Detailed Description
Declared organism
Artificial
Determined organism
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:187960117
      NM_011170
      1 of 18 hits reported for Mus musculus.
    • Hit length
      2,206 bp
    • E Value
      6.71E-2
    • BLAST Score
      40.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NM_011170
      0.91% cov
    • Alignment Length
      20 bp
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools

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