Thermophilic Polymerase Iii Holoenzyme

Data obtained from: USPTO Fulltext EMBL-EBI Pat DDBJ Pat NCBI GenBank
195 sequences found in this patent (in total)

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Download sequences in fasta format: 151 peptides 44 DNAs

Displaying 1 - 10 of 195 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
19
Sequence Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981921
      YP_145218
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      529 aa
    • E Value
      3.65E-2
    • BLAST Score
      42 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_145218
      3.59% cov
    • Alignment Length
      19 aa
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583049
      AAB82595
    • Hit length
      529 aa
    • E Value
      3.65E-2
    • BLAST Score
      42 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AAB82595
      3.59% cov
    • Alignment Length
      19 aa
    • CIGAR string
      19M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46199890
      YP_005557
    • Hit length
      529 aa
    • E Value
      3.68E-2
    • BLAST Score
      42 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_005557
      3.59% cov
    • Alignment Length
      19 aa
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333967577
      AEG34342
    • Hit length
      529 aa
    • E Value
      3.75E-2
    • BLAST Score
      42 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AEG34342
      3.59% cov
    • Alignment Length
      19 aa
  • Thermus aquaticus Y51MC23

    Thermus aquaticus Y51MC23

    • Public DB hit
      GI:218296188
      ZP_03496944
    • Hit length
      500 aa
    • E Value
      6.23E-1
    • BLAST Score
      37.7 bits
    • Similarity
      89.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_03496944
      3.8% cov
    • Alignment Length
      19 aa
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320449175
      YP_004201271
    • Hit length
      492 aa
    • E Value
      1.16E0
    • BLAST Score
      37 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      YP_004201271
      3.86% cov
    • Alignment Length
      19 aa
  • Actinomyces sp. oral taxon 848 str. F0332

    Actinomyces sp. oral taxon 848 str. F0332

    • Public DB hit
      GI:269217441
      ZP_06161295
    • Hit length
      401 aa
    • E Value
      1.37E0
    • BLAST Score
      37 bits
    • Similarity
      94.44%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 1
      94.74% cov
      ZP_06161295
      4.49% cov
    • Alignment Length
      18 aa
  • Actinomyces viscosus C505

    Actinomyces viscosus C505

    • Public DB hit
      GI:326772637
      ZP_08231921
    • Hit length
      365 aa
    • E Value
      2.06E0
    • BLAST Score
      36.2 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_08231921
      5.21% cov
    • Alignment Length
      19 aa
  • Actinomyces sp. oral taxon 171 str. F0337

    Actinomyces sp. oral taxon 171 str. F0337

    • Public DB hit
      GI:320532120
      ZP_08032996
    • Hit length
      357 aa
    • E Value
      2.13E0
    • BLAST Score
      36.2 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_08032996
      5.32% cov
    • Alignment Length
      19 aa
  • Actinomyces oris K20

    Actinomyces oris K20

    • Public DB hit
      GI:325066589
      ZP_08125262
    • Hit length
      352 aa
    • E Value
      2.16E0
    • BLAST Score
      36.2 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_08125262
      5.4% cov
    • Alignment Length
      19 aa
  • Actinomyces sp. oral taxon 170 str. F0386

    Actinomyces sp. oral taxon 170 str. F0386

    • Public DB hit
      GI:329948064
      ZP_08294965
    • Hit length
      1,079 aa
    • E Value
      2.18E0
    • BLAST Score
      36.2 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_08294965
      1.76% cov
    • Alignment Length
      19 aa
  • Actinomyces urogenitalis DSM 15434

    Actinomyces urogenitalis DSM 15434

    • Public DB hit
      GI:227496710
      ZP_03926985
    • Hit length
      375 aa
    • E Value
      2.62E0
    • BLAST Score
      35.8 bits
    • Similarity
      94.74%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_03926985
      5.07% cov
    • Alignment Length
      19 aa
  • Catenulispora acidiphila DSM 44928

    Catenulispora acidiphila DSM 44928

    • Public DB hit
      GI:256398119
      YP_003119683
    • Hit length
      863 aa
    • E Value
      3.17E0
    • BLAST Score
      35.4 bits
    • Similarity
      94.44%
    • Coverage
      94.74%
    • Alignment (schematic)

      SEQ ID NO 1
      94.74% cov
      YP_003119683
      2.09% cov
    • Alignment Length
      18 aa
  • Brevibacterium linens BL2

    Brevibacterium linens BL2

    • Public DB hit
      GI:260905315
      ZP_05913637
    • Hit length
      1,148 aa
    • E Value
      3.23E0
    • BLAST Score
      35.4 bits
    • Similarity
      89.47%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      ZP_05913637
      1.66% cov
    • Alignment Length
      19 aa
Occurrence
8 times in PatSeqDB
Tools
SEQ ID NO
2
Length
20
Sequence Type
peptide
Locations
Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46199890
      YP_005557
      1 of 2 hits reported for Thermus thermophilus HB27.
    • Hit length
      529 aa
    • E Value
      4.32E-3
    • BLAST Score
      45.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_005557
      3.78% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981921
      YP_145218
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      529 aa
    • E Value
      4.32E-3
    • BLAST Score
      45.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_145218
      3.78% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583049
      AAB82595
    • Hit length
      529 aa
    • E Value
      4.32E-3
    • BLAST Score
      45.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AAB82595
      3.78% cov
    • Alignment Length
      20 aa
    • CIGAR string
      20M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333967577
      AEG34342
    • Hit length
      529 aa
    • E Value
      4.36E-3
    • BLAST Score
      45.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AEG34342
      3.78% cov
    • Alignment Length
      20 aa
  • Thermus aquaticus Y51MC23

    Thermus aquaticus Y51MC23

    • Public DB hit
      GI:218296188
      ZP_03496944
    • Hit length
      500 aa
    • E Value
      8.01E-2
    • BLAST Score
      40.8 bits
    • Similarity
      90%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_03496944
      4% cov
    • Alignment Length
      20 aa
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320449175
      YP_004201271
    • Hit length
      492 aa
    • E Value
      1.5E-1
    • BLAST Score
      40 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      YP_004201271
      4.07% cov
    • Alignment Length
      20 aa
  • Actinomyces sp. oral taxon 848 str. F0332

    Actinomyces sp. oral taxon 848 str. F0332

    • Public DB hit
      GI:269217441
      ZP_06161295
    • Hit length
      401 aa
    • E Value
      1.91E-1
    • BLAST Score
      39.7 bits
    • Similarity
      94.74%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      ZP_06161295
      4.74% cov
    • Alignment Length
      19 aa
  • Actinomyces sp. oral taxon 170 str. F0386

    Actinomyces sp. oral taxon 170 str. F0386

    • Public DB hit
      GI:329948064
      ZP_08294965
      1 of 2 hits reported for Actinomyces sp. oral taxon 170 str. F0386.
    • Hit length
      1,079 aa
    • E Value
      2.9E-1
    • BLAST Score
      39.3 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_08294965
      1.85% cov
    • Alignment Length
      20 aa
  • Actinomyces viscosus C505

    Actinomyces viscosus C505

    • Public DB hit
      GI:326772637
      ZP_08231921
      1 of 2 hits reported for Actinomyces viscosus C505.
    • Hit length
      365 aa
    • E Value
      2.9E-1
    • BLAST Score
      39.3 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_08231921
      5.48% cov
    • Alignment Length
      20 aa
  • Actinomyces oris K20

    Actinomyces oris K20

    • Public DB hit
      GI:325066589
      ZP_08125262
      1 of 2 hits reported for Actinomyces oris K20.
    • Hit length
      352 aa
    • E Value
      2.97E-1
    • BLAST Score
      38.9 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_08125262
      5.68% cov
    • Alignment Length
      20 aa
  • Actinomyces sp. oral taxon 171 str. F0337

    Actinomyces sp. oral taxon 171 str. F0337

    • Public DB hit
      GI:320532120
      ZP_08032996
      1 of 2 hits reported for Actinomyces sp. oral taxon 171 str. F0337.
    • Hit length
      357 aa
    • E Value
      2.97E-1
    • BLAST Score
      38.9 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_08032996
      5.6% cov
    • Alignment Length
      20 aa
  • Brevibacterium linens BL2

    Brevibacterium linens BL2

    • Public DB hit
      GI:260905315
      ZP_05913637
    • Hit length
      1,148 aa
    • E Value
      3.2E-1
    • BLAST Score
      38.9 bits
    • Similarity
      90%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_05913637
      1.74% cov
    • Alignment Length
      20 aa
  • Actinomyces urogenitalis DSM 15434

    Actinomyces urogenitalis DSM 15434

    • Public DB hit
      GI:227496710
      ZP_03926985
    • Hit length
      375 aa
    • E Value
      3.45E-1
    • BLAST Score
      38.9 bits
    • Similarity
      95%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      ZP_03926985
      5.33% cov
    • Alignment Length
      20 aa
  • Catenulispora acidiphila DSM 44928

    Catenulispora acidiphila DSM 44928

    • Public DB hit
      GI:256398119
      YP_003119683
    • Hit length
      863 aa
    • E Value
      3.78E-1
    • BLAST Score
      38.9 bits
    • Similarity
      94.74%
    • Coverage
      95%
    • Alignment (schematic)

      SEQ ID NO 2
      95% cov
      YP_003119683
      2.2% cov
    • Alignment Length
      19 aa
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
3
Length
18
Sequence Type
peptide
Locations
Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981921
      YP_145218
      1 of 2 hits reported for Thermus thermophilus HB8.
    • Hit length
      529 aa
    • E Value
      4.71E-2
    • BLAST Score
      41.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_145218
      3.4% cov
    • Alignment Length
      18 aa
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583049
      AAB82595
    • Hit length
      529 aa
    • E Value
      4.71E-2
    • BLAST Score
      41.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAB82595
      3.4% cov
    • Alignment Length
      18 aa
    • CIGAR string
      18M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46199890
      YP_005557
    • Hit length
      529 aa
    • E Value
      4.75E-2
    • BLAST Score
      41.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_005557
      3.4% cov
    • Alignment Length
      18 aa
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333967577
      AEG34342
    • Hit length
      529 aa
    • E Value
      4.83E-2
    • BLAST Score
      41.6 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AEG34342
      3.4% cov
    • Alignment Length
      18 aa
  • Actinomyces sp. oral taxon 848 str. F0332

    Actinomyces sp. oral taxon 848 str. F0332

    • Public DB hit
      GI:269217441
      ZP_06161295
    • Hit length
      401 aa
    • E Value
      1.52E-1
    • BLAST Score
      40 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_06161295
      4.49% cov
    • Alignment Length
      18 aa
  • Catenulispora acidiphila DSM 44928

    Catenulispora acidiphila DSM 44928

    • Public DB hit
      GI:256398119
      YP_003119683
    • Hit length
      863 aa
    • E Value
      2.3E-1
    • BLAST Score
      39.3 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003119683
      2.09% cov
    • Alignment Length
      18 aa
  • Thermus aquaticus Y51MC23

    Thermus aquaticus Y51MC23

    • Public DB hit
      GI:218296188
      ZP_03496944
    • Hit length
      500 aa
    • E Value
      2.79E-1
    • BLAST Score
      38.9 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_03496944
      3.6% cov
    • Alignment Length
      18 aa
  • Actinomyces viscosus C505

    Actinomyces viscosus C505

    • Public DB hit
      GI:326772637
      ZP_08231921
    • Hit length
      365 aa
    • E Value
      4.41E-1
    • BLAST Score
      38.5 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_08231921
      4.93% cov
    • Alignment Length
      18 aa
  • Actinomyces oris K20

    Actinomyces oris K20

    • Public DB hit
      GI:325066589
      ZP_08125262
    • Hit length
      352 aa
    • E Value
      4.67E-1
    • BLAST Score
      38.1 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_08125262
      5.11% cov
    • Alignment Length
      18 aa
  • Actinomyces sp. oral taxon 171 str. F0337

    Actinomyces sp. oral taxon 171 str. F0337

    • Public DB hit
      GI:320532120
      ZP_08032996
    • Hit length
      357 aa
    • E Value
      4.75E-1
    • BLAST Score
      38.1 bits
    • Similarity
      94.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_08032996
      5.04% cov
    • Alignment Length
      18 aa
  • Brevibacterium linens BL2

    Brevibacterium linens BL2

    • Public DB hit
      GI:260905315
      ZP_05913637
    • Hit length
      1,148 aa
    • E Value
      6.21E-1
    • BLAST Score
      37.7 bits
    • Similarity
      88.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_05913637
      1.57% cov
    • Alignment Length
      18 aa
  • Xylanimonas cellulosilytica DSM 15894

    Xylanimonas cellulosilytica DSM 15894

    • Public DB hit
      GI:269955062
      YP_003324851
    • Hit length
      926 aa
    • E Value
      7.15E-1
    • BLAST Score
      37.7 bits
    • Similarity
      88.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003324851
      1.94% cov
    • Alignment Length
      18 aa
  • Streptomyces sp. Tu6071

    Streptomyces sp. Tu6071

    • Public DB hit
      GI:333025585
      ZP_08453649
    • Hit length
      468 aa
    • E Value
      8.04E-1
    • BLAST Score
      37.4 bits
    • Similarity
      88.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ZP_08453649
      3.85% cov
    • Alignment Length
      18 aa
  • Rothia dentocariosa ATCC 17931

    Rothia dentocariosa ATCC 17931

    • Public DB hit
      GI:311112888
      YP_003984110
    • Hit length
      957 aa
    • E Value
      8.11E-1
    • BLAST Score
      37.4 bits
    • Similarity
      88.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      YP_003984110
      1.88% cov
    • Alignment Length
      18 aa
Occurrence
Tools
SEQ ID NO
4
Length
19
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Unspecified
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
5
Length
18
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Unspecified
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
6
Length
19
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Unspecified
Determined organism
Occurrence
4 times in PatSeqDB
Tools
SEQ ID NO
7
Length
2,681
Sequence Type
DNA
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583048
      AF025391
    • Hit length
      2,724 bp
    • E Value
      0E0
    • BLAST Score
      4,940.9 bits
    • Similarity
      99.93%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AF025391
      98.42% cov
    • Alignment Length
      2,681 bp
    • CIGAR string
      698MN115MN1866M mismatches: 2 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46197919
      AE017221
    • Hit length
      1,894,877 bp
    • E Value
      0E0
    • BLAST Score
      4,935.4 bits
    • Similarity
      99.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      AE017221
      0.14% cov
    • Alignment Length
      2,681 bp
    • CIGAR string
      698MN115MN1305MN560M mismatches: 3 - insertions: 0 - deletions: 0
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333965676
      CP002777
    • Hit length
      1,863,201 bp
    • E Value
      0E0
    • BLAST Score
      4,536.5 bits
    • Similarity
      97.21%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      CP002777
      0.14% cov
    • Alignment Length
      2,686 bp
    • CIGAR string
      42MN7MN65MN32MN2MNMN3MN2MN7MN3MN6MD2N2MIN17MN8MN8MN11MN12MNMN13MIM2N3MD10MN13MIMNMDN119MN6MDMI3MN8MN5MNM2N7MD3MI20M2N2MN17MNMN3MN4M2N7MN4MN4MN17MN5MN15M2N9MN115MN3MN111MN392MN132MN7MN23MN5MN161MN8MN22MN3MN47MNMN172MN213MN60MN45MN308MN251M mismatches: 65 - insertions: 5 - deletions: 5
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55771382
      AP008226
    • Hit length
      1,849,742 bp
    • E Value
      0E0
    • BLAST Score
      4,337.1 bits
    • Similarity
      95.91%
    • Coverage
      99.89%
    • Alignment (schematic)

      SEQ ID NO 7
      99.89% cov
      AP008226
      0.14% cov
    • Alignment Length
      2,692 bp
Occurrence
Tools
SEQ ID NO
8
Length
528
Sequence Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583049
      AAB82595
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      1,012.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AAB82595
      99.81% cov
    • Alignment Length
      528 aa
    • CIGAR string
      528M mismatches: 0 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46199890
      YP_005557
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      1,008.1 bits
    • Similarity
      99.81%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_005557
      99.81% cov
    • Alignment Length
      528 aa
    • CIGAR string
      458MN69M mismatches: 1 - insertions: 0 - deletions: 0
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981921
      YP_145218
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      1,007.7 bits
    • Similarity
      99.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      YP_145218
      99.81% cov
    • Alignment Length
      528 aa
    • CIGAR string
      351MN106MN69M mismatches: 2 - insertions: 0 - deletions: 0
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333967577
      AEG34342
    • Hit length
      529 aa
    • E Value
      0E0
    • BLAST Score
      998 bits
    • Similarity
      98.86%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      AEG34342
      99.81% cov
    • Alignment Length
      528 aa
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320449175
      YP_004201271
    • Hit length
      492 aa
    • E Value
      2.47E-171
    • BLAST Score
      607.4 bits
    • Similarity
      78.59%
    • Coverage
      86.55%
    • Alignment (schematic)

      SEQ ID NO 8
      86.55% cov
      YP_004201271
      99.8% cov
    • Alignment Length
      495 aa
  • Thermus aquaticus Y51MC23

    Thermus aquaticus Y51MC23

    • Public DB hit
      GI:218296188
      ZP_03496944
    • Hit length
      500 aa
    • E Value
      1.95E-160
    • BLAST Score
      571.2 bits
    • Similarity
      81.01%
    • Coverage
      88.64%
    • Alignment (schematic)

      SEQ ID NO 8
      88.64% cov
      ZP_03496944
      93.4% cov
    • Alignment Length
      474 aa
  • Oceanithermus profundus DSM 14977

    Oceanithermus profundus DSM 14977

    • Public DB hit
      GI:313680933
      YP_004058672
    • Hit length
      615 aa
    • E Value
      3.15E-111
    • BLAST Score
      407.9 bits
    • Similarity
      77.68%
    • Coverage
      62.88%
    • Alignment (schematic)

      SEQ ID NO 8
      62.88% cov
      YP_004058672
      54.63% cov
    • Alignment Length
      336 aa
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
9
Length
273
Sequence Type
peptide
Locations
Detailed Description, Drawings, Summary
Declared organism
Unspecified
Determined organism
  • Thermus thermophilus SG0.5JP17-16

    Thermus thermophilus SG0.5JP17-16

    • Public DB hit
      GI:333967577
      AEG34342
    • Hit length
      529 aa
    • E Value
      1.65E-122
    • BLAST Score
      443.7 bits
    • Similarity
      92.58%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      AEG34342
      45.37% cov
    • Alignment Length
      256 aa
    • CIGAR string
      6H28MN34M6D69MD9M2D9MN18M4D29MN20MN2M3D18M11H mismatches: 4 - insertions: 0 - deletions: 16
  • Thermus thermophilus HB8

    Thermus thermophilus HB8

    • Public DB hit
      GI:55981921
      YP_145218
    • Hit length
      529 aa
    • E Value
      4.93E-114
    • BLAST Score
      415.6 bits
    • Similarity
      92.97%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_145218
      45.37% cov
    • Alignment Length
      256 aa
    • CIGAR string
      6H28MN34M6D69MD9M2D9MN18M4D50MN2M3D18M11H mismatches: 3 - insertions: 0 - deletions: 16
  • Thermus thermophilus

    Thermus thermophilus

    • Public DB hit
      GI:2583049
      AAB82595
    • Hit length
      529 aa
    • E Value
      7.24E-114
    • BLAST Score
      415.2 bits
    • Similarity
      92.97%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      AAB82595
      45.37% cov
    • Alignment Length
      256 aa
    • CIGAR string
      6H28MN34M6D69MD9M2D9MN18M4D50MN2M3D18M11H mismatches: 3 - insertions: 0 - deletions: 16
  • Thermus thermophilus HB27

    Thermus thermophilus HB27

    • Public DB hit
      GI:46199890
      YP_005557
    • Hit length
      529 aa
    • E Value
      7.36E-114
    • BLAST Score
      415.2 bits
    • Similarity
      92.97%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_005557
      45.37% cov
    • Alignment Length
      256 aa
  • Thermus scotoductus SA-01

    Thermus scotoductus SA-01

    • Public DB hit
      GI:320449175
      YP_004201271
    • Hit length
      492 aa
    • E Value
      5.51E-106
    • BLAST Score
      389 bits
    • Similarity
      88.28%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_004201271
      48.78% cov
    • Alignment Length
      256 aa
  • Thermus aquaticus Y51MC23

    Thermus aquaticus Y51MC23

    • Public DB hit
      GI:218296188
      ZP_03496944
    • Hit length
      500 aa
    • E Value
      3.64E-96
    • BLAST Score
      356.3 bits
    • Similarity
      86.72%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      ZP_03496944
      48% cov
    • Alignment Length
      256 aa
  • Marinithermus hydrothermalis DSM 14884

    Marinithermus hydrothermalis DSM 14884

    • Public DB hit
      GI:328951662
      YP_004368997
    • Hit length
      563 aa
    • E Value
      1.11E-89
    • BLAST Score
      334.7 bits
    • Similarity
      79.3%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_004368997
      43.16% cov
    • Alignment Length
      256 aa
  • Meiothermus silvanus DSM 9946

    Meiothermus silvanus DSM 9946

    • Public DB hit
      GI:297564866
      YP_003683838
    • Hit length
      485 aa
    • E Value
      3.12E-88
    • BLAST Score
      330.1 bits
    • Similarity
      77.73%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_003683838
      49.69% cov
    • Alignment Length
      256 aa
  • Meiothermus ruber DSM 1279

    Meiothermus ruber DSM 1279

    • Public DB hit
      GI:291297392
      YP_003508790
    • Hit length
      641 aa
    • E Value
      5.23E-88
    • BLAST Score
      329.3 bits
    • Similarity
      78.99%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_003508790
      37.44% cov
    • Alignment Length
      257 aa
  • Oceanithermus profundus DSM 14977

    Oceanithermus profundus DSM 14977

    • Public DB hit
      GI:313680933
      YP_004058672
    • Hit length
      615 aa
    • E Value
      9.7E-86
    • BLAST Score
      321.6 bits
    • Similarity
      77.65%
    • Coverage
      93.41%
    • Alignment (schematic)

      SEQ ID NO 9
      93.41% cov
      YP_004058672
      39.35% cov
    • Alignment Length
      255 aa
  • Truepera radiovictrix DSM 17093

    Truepera radiovictrix DSM 17093

    • Public DB hit
      GI:297624591
      YP_003706025
    • Hit length
      522 aa
    • E Value
      2.15E-80
    • BLAST Score
      303.9 bits
    • Similarity
      75.39%
    • Coverage
      93.77%
    • Alignment (schematic)

      SEQ ID NO 9
      93.77% cov
      YP_003706025
      45.98% cov
    • Alignment Length
      256 aa
Occurrence
3 times in PatSeqDB
Tools
SEQ ID NO
10
Length
273
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Unspecified
Determined organism
  • Escherichia coli 101-1

    Escherichia coli 101-1

    • Public DB hit
      GI:194437483
      ZP_03069580
    • Hit length
      643 aa
    • E Value
      7.18E-142
    • BLAST Score
      508.1 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      ZP_03069580
      39.97% cov
    • Alignment Length
      270 aa
    • CIGAR string
      3H67M4D70MD9M2D6MN21M4D30MN23M2D29M mismatches: 2 - insertions: 0 - deletions: 13
  • Shigella flexneri 2a str. 301

    Shigella flexneri 2a str. 301

    • Public DB hit
      GI:24111853
      NP_706363
    • Hit length
      641 aa
    • E Value
      8.01E-142
    • BLAST Score
      508.1 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      NP_706363
      40.09% cov
    • Alignment Length
      270 aa
    • CIGAR string
      3H67M4D70MD9M2D6MN21M4D30MN23M2D29M mismatches: 2 - insertions: 0 - deletions: 13
  • Escherichia coli str. K-12 substr. MG1655

    Escherichia coli str. K-12 substr. MG1655

    • Public DB hit
      GI:16128454
      NP_415003
    • Hit length
      643 aa
    • E Value
      8.21E-142
    • BLAST Score
      508.1 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      NP_415003
      39.97% cov
    • Alignment Length
      270 aa
    • CIGAR string
      3H67M4D70MD9M2D6MN21M4D30MN23M2D29M mismatches: 2 - insertions: 0 - deletions: 13
  • Escherichia albertii TW07627

    Escherichia albertii TW07627

    • Public DB hit
      GI:170767813
      ZP_02902266
    • Hit length
      640 aa
    • E Value
      8.35E-142
    • BLAST Score
      508.1 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      ZP_02902266
      40.16% cov
    • Alignment Length
      270 aa
  • Escherichia coli H120

    Escherichia coli H120

    • Public DB hit
      GI:323945253
      EGB41310
    • Hit length
      643 aa
    • E Value
      8.63E-142
    • BLAST Score
      508.1 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      EGB41310
      39.97% cov
    • Alignment Length
      270 aa
  • Shigella boydii CDC 3083-94

    Shigella boydii CDC 3083-94

    • Public DB hit
      GI:187733496
      YP_001879179
    • Hit length
      643 aa
    • E Value
      9.3E-142
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      YP_001879179
      39.97% cov
    • Alignment Length
      270 aa
  • Escherichia coli E110019

    Escherichia coli E110019

    • Public DB hit
      GI:193067655
      ZP_03048622
    • Hit length
      643 aa
    • E Value
      9.62E-142
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      ZP_03048622
      39.97% cov
    • Alignment Length
      270 aa
  • Shigella sonnei Ss046

    Shigella sonnei Ss046

    • Public DB hit
      GI:74311049
      YP_309468
      1 of 2 hits reported for Shigella sonnei Ss046.
    • Hit length
      641 aa
    • E Value
      1E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      YP_309468
      40.09% cov
    • Alignment Length
      270 aa
  • Shigella flexneri VA-6

    Shigella flexneri VA-6

    • Public DB hit
      GI:333008160
      EGK27635
    • Hit length
      641 aa
    • E Value
      1E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      EGK27635
      40.09% cov
    • Alignment Length
      270 aa
  • Escherichia coli UMN026

    Escherichia coli UMN026

    • Public DB hit
      GI:218703753
      YP_002411272
    • Hit length
      643 aa
    • E Value
      1.02E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      YP_002411272
      39.97% cov
    • Alignment Length
      270 aa
  • Escherichia coli M863

    Escherichia coli M863

    • Public DB hit
      GI:323965156
      EGB60615
    • Hit length
      643 aa
    • E Value
      1.04E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      EGB60615
      39.97% cov
    • Alignment Length
      270 aa
  • Escherichia coli O127:H6 str. E2348/69

    Escherichia coli O127:H6 str. E2348/69

    • Public DB hit
      GI:215485550
      YP_002327981
    • Hit length
      643 aa
    • E Value
      1.05E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      YP_002327981
      39.97% cov
    • Alignment Length
      270 aa
  • Escherichia coli H299

    Escherichia coli H299

    • Public DB hit
      GI:331681865
      ZP_08382498
    • Hit length
      643 aa
    • E Value
      1.05E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      ZP_08382498
      39.97% cov
    • Alignment Length
      270 aa
  • Escherichia coli 536

    Escherichia coli 536

    • Public DB hit
      GI:110640731
      YP_668459
    • Hit length
      643 aa
    • E Value
      1.13E-141
    • BLAST Score
      507.7 bits
    • Similarity
      95.19%
    • Coverage
      98.9%
    • Alignment (schematic)

      SEQ ID NO 10
      98.9% cov
      YP_668459
      39.97% cov
    • Alignment Length
      270 aa
Occurrence
3 times in PatSeqDB
Tools

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