Loading...

Search for Biological Sequences disclosed in Patents

Discover PatSeq Finder: Search and analyse similar sequence matches in the Lens PatSeq database effortlessly using PatSeq Finder. Scan 480M+ biological sequences disclosed in patents on a privacy-assured platform and give your IP strategy the edge.

View PatSeq Dismiss
Data obtained from: DDBJ Pat NCBI GenBank USPTO Fulltext EMBL-EBI Pat
17 sequences found in this patent (in total)

Displaying 1 - 10 of 17 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
798
Type
nucleotide
Locations
Claims, Detailed Description, Summary

Declared organism:
Euphausia superba

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
798
Type
nucleotide
Locations
Claims, Detailed Description, Summary

Declared organism:
Euphausia superba

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
266
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Euphausia superba

Determined organism:
  • Fenneropenaeus chinensis

    Fenneropenaeus chinensis

    • Public DB hit
      GI:229258304
      ACQ45455
      1 of 8 hits reported for Fenneropenaeus chinensis.
    • Hit length
      266 aa
    • E Value
      1.31E-126
    • BLAST Score
      457.2 bits
    • Similarity
      89.77%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 3
      99.25% cov
      ACQ45455
      99.25% cov
    • Alignment Length
      264 aa
    • CIGAR string
      2M2NMNMN5MN10M2N7M2NMN12MNMNMNMN10MN9MN17MN2M2N6MN12MN2MN5MNM2N7MN2MN2M2NM2N2MN23MN2MN2MNMNMN2MN4M2N2MN7MN15MN7MN4MN16MN2MNMN4M2NM2H mismatches: 50 - insertions: 0 - deletions: 0
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:190610833
      ACE80257
      1 of 2 hits reported for Marsupenaeus japonicus.
    • Hit length
      266 aa
    • E Value
      1.8E-126
    • BLAST Score
      456.8 bits
    • Similarity
      89.02%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 3
      99.25% cov
      ACE80257
      99.25% cov
    • Alignment Length
      264 aa
    • CIGAR string
      2M2NMN3MN3MN10M2N7MNM2N12MNMNM3N20MN20M2N6M2N8MN2MN2MN5MNMN2MN2MN3MNM2NM2N2MN2MN17MN3MN4MN2MNMNMN2MN4M5N23M2N6MN4MN10MN8MN6MN2M2H mismatches: 53 - insertions: 0 - deletions: 0
  • Litopenaeus vannamei

    Litopenaeus vannamei

    • Public DB hit
      GI:3006086
      CAA75311
      1 of 4 hits reported for Litopenaeus vannamei.
    • Hit length
      263 aa
    • E Value
      2.09E-125
    • BLAST Score
      453.4 bits
    • Similarity
      90.04%
    • Coverage
      98.12%
    • Alignment (schematic)

      SEQ ID NO 3
      98.12% cov
      CAA75311
      99.24% cov
    • Alignment Length
      261 aa
    • CIGAR string
      3HNMN3MN3MN10M2N7M2NMN12MNMNM3N20MN18MNM2N6M2N8MN2MN2MN5MN7MN5M2NMN6MN17MN5MN2MN2MNMNMN2MN4M3NMN7MN15MN7MN2MNMN16MN4MN4M2NM2H mismatches: 49 - insertions: 0 - deletions: 0
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027776
      ADB66711
      1 of 5 hits reported for Panulirus argus.
    • Hit length
      266 aa
    • E Value
      1.86E-122
    • BLAST Score
      443.7 bits
    • Similarity
      87.22%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      ADB66711
      100% cov
    • Alignment Length
      266 aa
  • Paralithodes camtschaticus

    Paralithodes camtschaticus

    • Public DB hit
      GI:18266073
      AAL67442
    • Hit length
      266 aa
    • E Value
      1.84E-98
    • BLAST Score
      364 bits
    • Similarity
      80.08%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      AAL67442
      100% cov
    • Alignment Length
      266 aa
  • Pacifastacus leniusculus

    Pacifastacus leniusculus

    • Public DB hit
      GI:2853182
      CAA10915
    • Hit length
      268 aa
    • E Value
      5.99E-94
    • BLAST Score
      349 bits
    • Similarity
      75.76%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 3
      99.25% cov
      CAA10915
      98.51% cov
    • Alignment Length
      264 aa
  • Pontastacus leptodactylus

    Pontastacus leptodactylus

    • Public DB hit
      GI:99032198
      2F91_A
      1 of 2 hits reported for Pontastacus leptodactylus.
    • Hit length
      237 aa
    • E Value
      8.8E-89
    • BLAST Score
      331.6 bits
    • Similarity
      78.72%
    • Coverage
      88.35%
    • Alignment (schematic)

      SEQ ID NO 3
      88.35% cov
      2F91_A
      99.16% cov
    • Alignment Length
      235 aa
  • Astacus astacus

    Astacus astacus

    • Public DB hit
      GI:136424
      P00765
    • Hit length
      237 aa
    • E Value
      8.59E-88
    • BLAST Score
      328.6 bits
    • Similarity
      78.3%
    • Coverage
      88.35%
    • Alignment (schematic)

      SEQ ID NO 3
      88.35% cov
      P00765
      99.16% cov
    • Alignment Length
      235 aa
  • Euphausia pacifica

    Euphausia pacifica

    • Public DB hit
      GI:146150454
      ABQ02516
    • Hit length
      185 aa
    • E Value
      3.8E-84
    • BLAST Score
      316.2 bits
    • Similarity
      89.19%
    • Coverage
      69.55%
    • Alignment (schematic)

      SEQ ID NO 3
      69.55% cov
      ABQ02516
      100% cov
    • Alignment Length
      185 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
266
Type
peptide
Locations
Claims, Detailed Description, Summary

Declared organism:
Euphausia superba

Determined organism:
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:190610833
      ACE80257
      1 of 2 hits reported for Marsupenaeus japonicus.
    • Hit length
      266 aa
    • E Value
      1.55E-129
    • BLAST Score
      467.2 bits
    • Similarity
      90.15%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 4
      99.25% cov
      ACE80257
      99.25% cov
    • Alignment Length
      264 aa
    • CIGAR string
      2M2NMN3MN3MN19MNM2N12MNMNM3N20MN20M2N6M2N8MN2MN2MN5MNMN2MN2MN5MN3MN2MN2MN17MN3MN4MN2MNMNMN2MN4M5N23M2N6MN4MN10MN8MN6MN2M2H mismatches: 48 - insertions: 0 - deletions: 0
  • Litopenaeus vannamei

    Litopenaeus vannamei

    • Public DB hit
      GI:3006086
      CAA75311
      1 of 4 hits reported for Litopenaeus vannamei.
    • Hit length
      263 aa
    • E Value
      9.62E-128
    • BLAST Score
      461.1 bits
    • Similarity
      91.19%
    • Coverage
      98.12%
    • Alignment (schematic)

      SEQ ID NO 4
      98.12% cov
      CAA75311
      99.24% cov
    • Alignment Length
      261 aa
    • CIGAR string
      3HNMN3MN3MN19M2NMN12MNMNM3N20MN18MNM2N6M2N8MN2MN2MN5MN7MN3MNMN9MN17MN5MN2MN2MNMNMN2MN4M3NMN7MN15MN7MN2MNMN16MN4MN4M2NM2H mismatches: 46 - insertions: 0 - deletions: 0
  • Fenneropenaeus chinensis

    Fenneropenaeus chinensis

    • Public DB hit
      GI:229258304
      ACQ45455
      1 of 8 hits reported for Fenneropenaeus chinensis.
    • Hit length
      266 aa
    • E Value
      8.71E-127
    • BLAST Score
      458 bits
    • Similarity
      89.77%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 4
      99.25% cov
      ACQ45455
      99.25% cov
    • Alignment Length
      264 aa
    • CIGAR string
      2M2NMNMN5MN19M2NMN12MNMNMNMN10MN9MN17MN2M2N6MN12MN2MN5MNM2N7M2NM2NM2NM2N2MN23MN2MN2MNMNMN2MN4M2N2MN7MN15MN7MN4MN16MN2MNMN4M2NM2H mismatches: 50 - insertions: 0 - deletions: 0
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027776
      ADB66711
      1 of 5 hits reported for Panulirus argus.
    • Hit length
      266 aa
    • E Value
      1.54E-125
    • BLAST Score
      453.8 bits
    • Similarity
      88.35%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      ADB66711
      100% cov
    • Alignment Length
      266 aa
  • Paralithodes camtschaticus

    Paralithodes camtschaticus

    • Public DB hit
      GI:18266073
      AAL67442
    • Hit length
      266 aa
    • E Value
      7.61E-101
    • BLAST Score
      371.7 bits
    • Similarity
      81.2%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      AAL67442
      100% cov
    • Alignment Length
      266 aa
  • Pacifastacus leniusculus

    Pacifastacus leniusculus

    • Public DB hit
      GI:2853182
      CAA10915
    • Hit length
      268 aa
    • E Value
      4.43E-95
    • BLAST Score
      352.8 bits
    • Similarity
      76.14%
    • Coverage
      99.25%
    • Alignment (schematic)

      SEQ ID NO 4
      99.25% cov
      CAA10915
      98.51% cov
    • Alignment Length
      264 aa
  • Pontastacus leptodactylus

    Pontastacus leptodactylus

    • Public DB hit
      GI:99032198
      2F91_A
      1 of 2 hits reported for Pontastacus leptodactylus.
    • Hit length
      237 aa
    • E Value
      2.41E-90
    • BLAST Score
      337 bits
    • Similarity
      79.57%
    • Coverage
      88.35%
    • Alignment (schematic)

      SEQ ID NO 4
      88.35% cov
      2F91_A
      99.16% cov
    • Alignment Length
      235 aa
  • Astacus astacus

    Astacus astacus

    • Public DB hit
      GI:136424
      P00765
    • Hit length
      237 aa
    • E Value
      2.34E-89
    • BLAST Score
      333.6 bits
    • Similarity
      79.15%
    • Coverage
      88.35%
    • Alignment (schematic)

      SEQ ID NO 4
      88.35% cov
      P00765
      99.16% cov
    • Alignment Length
      235 aa
  • Euphausia superba

    Euphausia superba

    • Public DB hit
      GI:146150468
      ABQ02523
    • Hit length
      185 aa
    • E Value
      7.52E-85
    • BLAST Score
      318.5 bits
    • Similarity
      90.81%
    • Coverage
      69.55%
    • Alignment (schematic)

      SEQ ID NO 4
      69.55% cov
      ABQ02523
      100% cov
    • Alignment Length
      185 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
23
Type
peptide
Locations
Detailed Description

Declared organism:
Euphausia superba

Determined organism:
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027784
      ADB66715
    • Hit length
      278 aa
    • E Value
      4.85E0
    • BLAST Score
      35.4 bits
    • Similarity
      78.26%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ADB66715
      8.27% cov
    • Alignment Length
      23 aa
    • CIGAR string
      MN2MNMNMN2M2N3MN3MN2M mismatches: 8 - insertions: 0 - deletions: 0
  • Metapenaeus ensis

    Metapenaeus ensis

    • Public DB hit
      GI:146150484
      ABQ02531
    • Hit length
      185 aa
    • E Value
      5.78E0
    • BLAST Score
      35 bits
    • Similarity
      82.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ABQ02531
      12.43% cov
    • Alignment Length
      23 aa
    • CIGAR string
      MN2MNMN4MN4M2NM2N2M mismatches: 8 - insertions: 0 - deletions: 0
  • Portunus trituberculatus

    Portunus trituberculatus

    • Public DB hit
      GI:146150498
      ABQ02538
    • Hit length
      185 aa
    • E Value
      6.18E0
    • BLAST Score
      35 bits
    • Similarity
      82.61%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      ABQ02538
      12.43% cov
    • Alignment Length
      23 aa
    • CIGAR string
      MN2MNMN4MN4M2NM2N2M mismatches: 8 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
21
Type
peptide
Locations
Detailed Description

Declared organism:
Euphausia superba

Determined organism:
  • Metapenaeus ensis

    Metapenaeus ensis

    • Public DB hit
      GI:146150484
      ABQ02531
    • Hit length
      185 aa
    • E Value
      5.1E-3
    • BLAST Score
      45.1 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02531
      11.35% cov
    • Alignment Length
      21 aa
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Fenneropenaeus chinensis

    Fenneropenaeus chinensis

    • Public DB hit
      GI:47078719
      AAT09988
      1 of 7 hits reported for Fenneropenaeus chinensis.
    • Hit length
      183 aa
    • E Value
      5.5E-3
    • BLAST Score
      45.1 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAT09988
      11.48% cov
    • Alignment Length
      21 aa
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:47078721
      AAT09989
    • Hit length
      182 aa
    • E Value
      5.68E-3
    • BLAST Score
      44.7 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAT09989
      11.54% cov
    • Alignment Length
      21 aa
    • CIGAR string
      11MN9M mismatches: 1 - insertions: 0 - deletions: 0
  • Portunus trituberculatus

    Portunus trituberculatus

    • Public DB hit
      GI:146150500
      ABQ02539
      1 of 2 hits reported for Portunus trituberculatus.
    • Hit length
      185 aa
    • E Value
      1.02E-2
    • BLAST Score
      43.9 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02539
      11.35% cov
    • Alignment Length
      21 aa
  • Neocaridina denticulata sinensis

    Neocaridina denticulata sinensis

    • Public DB hit
      GI:47078723
      AAT09990
    • Hit length
      182 aa
    • E Value
      1.26E-2
    • BLAST Score
      43.5 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAT09990
      11.54% cov
    • Alignment Length
      21 aa
  • Paralithodes camtschaticus

    Paralithodes camtschaticus

    • Public DB hit
      GI:18266073
      AAL67442
    • Hit length
      266 aa
    • E Value
      1.35E-2
    • BLAST Score
      43.5 bits
    • Similarity
      95.24%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      AAL67442
      7.89% cov
    • Alignment Length
      21 aa
  • Euphausia superba

    Euphausia superba

    • Public DB hit
      GI:146150468
      ABQ02523
      1 of 2 hits reported for Euphausia superba.
    • Hit length
      185 aa
    • E Value
      1.74E-2
    • BLAST Score
      43.1 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02523
      11.35% cov
    • Alignment Length
      21 aa
  • Palaemon carinicauda

    Palaemon carinicauda

    • Public DB hit
      GI:146150490
      ABQ02534
    • Hit length
      185 aa
    • E Value
      3.2E-2
    • BLAST Score
      42.4 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02534
      11.35% cov
    • Alignment Length
      21 aa
  • Acetes chinensis

    Acetes chinensis

    • Public DB hit
      GI:146150444
      ABQ02511
      1 of 5 hits reported for Acetes chinensis.
    • Hit length
      185 aa
    • E Value
      3.2E-2
    • BLAST Score
      42.4 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02511
      11.35% cov
    • Alignment Length
      21 aa
  • Euphausia pacifica

    Euphausia pacifica

    • Public DB hit
      GI:146150458
      ABQ02518
      1 of 3 hits reported for Euphausia pacifica.
    • Hit length
      185 aa
    • E Value
      3.62E-2
    • BLAST Score
      42.4 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ABQ02518
      11.35% cov
    • Alignment Length
      21 aa
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027780
      ADB66713
    • Hit length
      266 aa
    • E Value
      4.17E-2
    • BLAST Score
      42 bits
    • Similarity
      90.48%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      ADB66713
      7.89% cov
    • Alignment Length
      21 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
16
Type
peptide
Locations
Detailed Description

Declared organism:
Euphausia superba

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
36
Type
peptide
Locations
Detailed Description

Declared organism:
Euphausia superba

Determined organism:
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027778
      ADB66712
      1 of 3 hits reported for Panulirus argus.
    • Hit length
      266 aa
    • E Value
      1.4E-6
    • BLAST Score
      57 bits
    • Similarity
      83.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ADB66712
      13.53% cov
    • Alignment Length
      36 aa
    • CIGAR string
      M2NMNMNMNM2N4MN3MN7MN7M mismatches: 10 - insertions: 0 - deletions: 0
  • Euphausia pacifica

    Euphausia pacifica

    • Public DB hit
      GI:146150454
      ABQ02516
      1 of 4 hits reported for Euphausia pacifica.
    • Hit length
      185 aa
    • E Value
      4.14E-6
    • BLAST Score
      55.5 bits
    • Similarity
      83.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABQ02516
      19.46% cov
    • Alignment Length
      36 aa
  • Fenneropenaeus chinensis

    Fenneropenaeus chinensis

    • Public DB hit
      GI:229258304
      ACQ45455
      1 of 6 hits reported for Fenneropenaeus chinensis.
    • Hit length
      266 aa
    • E Value
      4.28E-6
    • BLAST Score
      55.5 bits
    • Similarity
      83.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ACQ45455
      13.53% cov
    • Alignment Length
      36 aa
  • Litopenaeus vannamei

    Litopenaeus vannamei

    • Public DB hit
      GI:3006086
      CAA75311
      1 of 4 hits reported for Litopenaeus vannamei.
    • Hit length
      263 aa
    • E Value
      4.73E-6
    • BLAST Score
      55.5 bits
    • Similarity
      86.11%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      CAA75311
      13.69% cov
    • Alignment Length
      36 aa
  • Acetes chinensis

    Acetes chinensis

    • Public DB hit
      GI:146150442
      ABQ02510
      1 of 2 hits reported for Acetes chinensis.
    • Hit length
      185 aa
    • E Value
      5.23E-6
    • BLAST Score
      55.1 bits
    • Similarity
      80.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABQ02510
      19.46% cov
    • Alignment Length
      36 aa
  • Euphausia superba

    Euphausia superba

    • Public DB hit
      GI:146150470
      ABQ02524
      1 of 2 hits reported for Euphausia superba.
    • Hit length
      185 aa
    • E Value
      5.97E-6
    • BLAST Score
      55.1 bits
    • Similarity
      86.11%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABQ02524
      19.46% cov
    • Alignment Length
      36 aa
  • Charybdis japonica

    Charybdis japonica

    • Public DB hit
      GI:146150450
      ABQ02514
    • Hit length
      185 aa
    • E Value
      6.94E-6
    • BLAST Score
      54.7 bits
    • Similarity
      83.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABQ02514
      19.46% cov
    • Alignment Length
      36 aa
  • Metapenaeus ensis

    Metapenaeus ensis

    • Public DB hit
      GI:146150488
      ABQ02533
      1 of 2 hits reported for Metapenaeus ensis.
    • Hit length
      185 aa
    • E Value
      8.62E-6
    • BLAST Score
      54.3 bits
    • Similarity
      83.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ABQ02533
      19.46% cov
    • Alignment Length
      36 aa
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:190610833
      ACE80257
    • Hit length
      266 aa
    • E Value
      1.02E-5
    • BLAST Score
      54.3 bits
    • Similarity
      80.56%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      ACE80257
      13.53% cov
    • Alignment Length
      36 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
15
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
26
Type
nucleotide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Phaeosphaeria nodorum SN15

    Phaeosphaeria nodorum SN15

    • Public DB hit
      GI:169605080
      XM_001795909
      1 of 2 hits reported for Phaeosphaeria nodorum SN15.
    • Hit length
      995 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XM_001795909
      2.61% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Panulirus argus

    Panulirus argus

    • Public DB hit
      GI:284027781
      GU338029
      1 of 3 hits reported for Panulirus argus.
    • Hit length
      879 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      GU338029
      2.96% cov
    • Alignment Length
      26 bp
    • CIGAR string
      26M mismatches: 0 - insertions: 0 - deletions: 0
  • Fenneropenaeus chinensis

    Fenneropenaeus chinensis

    • Public DB hit
      GI:229258303
      FJ904937
      1 of 5 hits reported for Fenneropenaeus chinensis.
    • Hit length
      878 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      FJ904937
      2.96% cov
    • Alignment Length
      26 bp
  • Palaemon carinicauda

    Palaemon carinicauda

    • Public DB hit
      GI:146150493
      EF530722
      1 of 2 hits reported for Palaemon carinicauda.
    • Hit length
      665 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EF530722
      3.91% cov
    • Alignment Length
      26 bp
  • Euphausia superba

    Euphausia superba

    • Public DB hit
      GI:146150469
      EF530710
      1 of 3 hits reported for Euphausia superba.
    • Hit length
      795 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EF530710
      3.27% cov
    • Alignment Length
      26 bp
  • Euphausia pacifica

    Euphausia pacifica

    • Public DB hit
      GI:146150455
      EF530703
      1 of 2 hits reported for Euphausia pacifica.
    • Hit length
      665 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EF530703
      3.91% cov
    • Alignment Length
      26 bp
  • Charybdis japonica

    Charybdis japonica

    • Public DB hit
      GI:146150449
      EF530700
    • Hit length
      802 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      EF530700
      3.24% cov
    • Alignment Length
      26 bp
  • Marsupenaeus japonicus

    Marsupenaeus japonicus

    • Public DB hit
      GI:47078720
      AY596944
    • Hit length
      656 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AY596944
      3.96% cov
    • Alignment Length
      26 bp
  • Pontastacus leptodactylus

    Pontastacus leptodactylus

    • Public DB hit
      GI:62752064
      AY906961
    • Hit length
      714 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AY906961
      3.64% cov
    • Alignment Length
      26 bp
  • Parastagonospora nodorum

    Parastagonospora nodorum

    • Public DB hit
      GI:3661611
      AF092435
    • Hit length
      3,582 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AF092435
      0.73% cov
    • Alignment Length
      26 bp
  • Litopenaeus vannamei

    Litopenaeus vannamei

    • Public DB hit
      GI:3006085
      Y15041
      1 of 3 hits reported for Litopenaeus vannamei.
    • Hit length
      1,206 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      Y15041
      2.16% cov
    • Alignment Length
      26 bp
  • Pacifastacus leniusculus

    Pacifastacus leniusculus

    • Public DB hit
      GI:2853181
      AJ222658
    • Hit length
      900 bp
    • E Value
      6.17E-5
    • BLAST Score
      52 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      AJ222658
      2.89% cov
    • Alignment Length
      26 bp
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder

Filter Sequences

Clear

Sign in to the Lens

Forgot Password? Register New Account

Language Improvements

We have been busy updating our localisation and all existing languages.

Much of these translations have been done using machine translation with a check from a native speaker, however not all elements of the UI have been checked for each language. If you see a term that is not translated correctly or should be improved, please contact Support.

  Don't show again
Feedback