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Search for Biological Sequences disclosed in Patents

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Data obtained from: USPTO Fulltext
161 sequences found in this patent (in total)

Displaying 1 - 10 of 161 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
110
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      4.42E-55
    • BLAST Score
      218 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      NP_444513
      100% cov
    • Alignment Length
      110 aa
    • CIGAR string
      110M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      1.77E-53
    • BLAST Score
      213 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002823400
      100% cov
    • Alignment Length
      110 aa
    • CIGAR string
      43MN32MN4MN22MN5M mismatches: 4 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      4.9E-51
    • BLAST Score
      204.9 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_003252914
      100% cov
    • Alignment Length
      110 aa
    • CIGAR string
      32MN15MN25MNMN4MN4MN17MNMN3M mismatches: 8 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      3.89E-41
    • BLAST Score
      171.8 bits
    • Similarity
      95.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001092492
      78.01% cov
    • Alignment Length
      110 aa
Occurrence
154 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
48
Type
peptide
Locations
Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      3.04E-16
    • BLAST Score
      89.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_444513
      43.64% cov
    • Alignment Length
      48 aa
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      2.9E-15
    • BLAST Score
      85.9 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002823400
      43.64% cov
    • Alignment Length
      48 aa
    • CIGAR string
      14MN4MN22MN5M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      7.19E-14
    • BLAST Score
      81.3 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001092492
      34.04% cov
    • Alignment Length
      48 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      1.27E-13
    • BLAST Score
      80.5 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_003252914
      43.64% cov
    • Alignment Length
      48 aa
Occurrence
85 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
47
Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      8.82E-16
    • BLAST Score
      87.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_444513
      42.73% cov
    • Alignment Length
      47 aa
    • CIGAR string
      47M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      8.32E-15
    • BLAST Score
      84.3 bits
    • Similarity
      97.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_002823400
      42.73% cov
    • Alignment Length
      47 aa
    • CIGAR string
      14MN4MN22MN4M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      2.08E-13
    • BLAST Score
      79.7 bits
    • Similarity
      93.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001092492
      33.33% cov
    • Alignment Length
      47 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      3.35E-13
    • BLAST Score
      79 bits
    • Similarity
      93.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003252914
      42.73% cov
    • Alignment Length
      47 aa
Occurrence
74 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
30
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      1.04E-8
    • BLAST Score
      64.3 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      NP_444513
      27.27% cov
    • Alignment Length
      30 aa
    • CIGAR string
      30M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      3.81E-8
    • BLAST Score
      62.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002823400
      27.27% cov
    • Alignment Length
      30 aa
    • CIGAR string
      24MN5M mismatches: 1 - insertions: 0 - deletions: 0
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      2.96E-7
    • BLAST Score
      59.3 bits
    • Similarity
      96.55%
    • Coverage
      96.67%
    • Alignment (schematic)

      SEQ ID NO 4
      96.67% cov
      XP_003252914
      26.36% cov
    • Alignment Length
      29 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      3.74E-7
    • BLAST Score
      58.9 bits
    • Similarity
      96.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001092492
      21.28% cov
    • Alignment Length
      30 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
30
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
Occurrence
6 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
458
Type
nucleotide
Locations
Drawings

Declared organism:
Homo sapiens

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:46575617
      BC069108
      1 of 10 hits reported for Homo sapiens.
    • Hit length
      458 bp
    • E Value
      0E0
    • BLAST Score
      841.3 bits
    • Similarity
      99.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      BC069108
      100% cov
    • Alignment Length
      458 bp
    • CIGAR string
      442MN15M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332839077
      XM_001170688
    • Hit length
      642 bp
    • E Value
      0E0
    • BLAST Score
      822.9 bits
    • Similarity
      99.12%
    • Coverage
      99.78%
    • Alignment (schematic)

      SEQ ID NO 6
      99.78% cov
      XM_001170688
      71.18% cov
    • Alignment Length
      457 bp
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692092
      XM_002823354
    • Hit length
      643 bp
    • E Value
      0E0
    • BLAST Score
      800.7 bits
    • Similarity
      98.25%
    • Coverage
      99.78%
    • Alignment (schematic)

      SEQ ID NO 6
      99.78% cov
      XM_002823354
      71.07% cov
    • Alignment Length
      457 bp
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262586
      XM_001092492
    • Hit length
      599 bp
    • E Value
      0E0
    • BLAST Score
      712.1 bits
    • Similarity
      94.76%
    • Coverage
      99.78%
    • Alignment (schematic)

      SEQ ID NO 6
      99.78% cov
      XM_001092492
      76.29% cov
    • Alignment Length
      458 bp
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207661
      XM_003252866
    • Hit length
      430 bp
    • E Value
      0E0
    • BLAST Score
      689.9 bits
    • Similarity
      95.59%
    • Coverage
      94.1%
    • Alignment (schematic)

      SEQ ID NO 6
      94.1% cov
      XM_003252866
      100% cov
    • Alignment Length
      431 bp
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:312151155
      HQ447604
      1 of 2 hits reported for synthetic construct.
    • Hit length
      432 bp
    • E Value
      1.69E-173
    • BLAST Score
      617.9 bits
    • Similarity
      100%
    • Coverage
      72.93%
    • Alignment (schematic)

      SEQ ID NO 6
      72.93% cov
      HQ447604
      77.31% cov
    • Alignment Length
      334 bp
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:24637712
      AF531422
    • Hit length
      333 bp
    • E Value
      6.1E-173
    • BLAST Score
      616.1 bits
    • Similarity
      100%
    • Coverage
      72.71%
    • Alignment (schematic)

      SEQ ID NO 6
      72.71% cov
      AF531422
      100% cov
    • Alignment Length
      333 bp
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
24
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 2 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      1.01E-4
    • BLAST Score
      50.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_444513
      21.82% cov
    • Alignment Length
      24 aa
    • CIGAR string
      24M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      3.5E-4
    • BLAST Score
      48.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002823400
      21.82% cov
    • Alignment Length
      24 aa
    • CIGAR string
      2MN21M mismatches: 1 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      3.53E-4
    • BLAST Score
      48.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001092492
      17.02% cov
    • Alignment Length
      24 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      5.01E-4
    • BLAST Score
      48.5 bits
    • Similarity
      95.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_003252914
      21.82% cov
    • Alignment Length
      24 aa
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
48
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      3.04E-16
    • BLAST Score
      89.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_444513
      43.64% cov
    • Alignment Length
      48 aa
    • CIGAR string
      48M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      2.9E-15
    • BLAST Score
      85.9 bits
    • Similarity
      97.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_002823400
      43.64% cov
    • Alignment Length
      48 aa
    • CIGAR string
      14MN4MN22MN5M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      7.19E-14
    • BLAST Score
      81.3 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_001092492
      34.04% cov
    • Alignment Length
      48 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      1.27E-13
    • BLAST Score
      80.5 bits
    • Similarity
      93.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      XP_003252914
      43.64% cov
    • Alignment Length
      48 aa
Occurrence
85 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
47
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      8.82E-16
    • BLAST Score
      87.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      NP_444513
      42.73% cov
    • Alignment Length
      47 aa
    • CIGAR string
      47M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      8.32E-15
    • BLAST Score
      84.3 bits
    • Similarity
      97.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_002823400
      42.73% cov
    • Alignment Length
      47 aa
    • CIGAR string
      14MN4MN22MN4M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      2.08E-13
    • BLAST Score
      79.7 bits
    • Similarity
      93.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_001092492
      33.33% cov
    • Alignment Length
      47 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      3.35E-13
    • BLAST Score
      79 bits
    • Similarity
      93.62%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 9
      100% cov
      XP_003252914
      42.73% cov
    • Alignment Length
      47 aa
Occurrence
74 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
45
Type
peptide
Locations
Detailed Description

Declared organism:
Artificial

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:16751921
      NP_444513
      1 of 3 hits reported for Homo sapiens.
    • Hit length
      110 aa
    • E Value
      1.02E-14
    • BLAST Score
      84 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      NP_444513
      40.91% cov
    • Alignment Length
      45 aa
    • CIGAR string
      45M mismatches: 0 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692093
      XP_002823400
    • Hit length
      110 aa
    • E Value
      9.1E-14
    • BLAST Score
      80.9 bits
    • Similarity
      97.78%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_002823400
      40.91% cov
    • Alignment Length
      45 aa
    • CIGAR string
      11MN4MN22MN5M mismatches: 3 - insertions: 0 - deletions: 0
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:297262587
      XP_001092492
    • Hit length
      141 aa
    • E Value
      9.57E-13
    • BLAST Score
      77.4 bits
    • Similarity
      93.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_001092492
      31.91% cov
    • Alignment Length
      45 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332207662
      XP_003252914
    • Hit length
      110 aa
    • E Value
      3.64E-12
    • BLAST Score
      75.5 bits
    • Similarity
      93.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 10
      100% cov
      XP_003252914
      40.91% cov
    • Alignment Length
      45 aa
Occurrence
12 times in PatSeqDB
Tools
PatSeq Finder

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