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Search for Biological Sequences disclosed in Patents

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Data obtained from: DDBJ Pat NCBI GenBank (DDBJ) WIPO-PCT EMBL-EBI Pat
38 sequences found in this patent (in total)

Displaying 1 - 10 of 38 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,323
Type
DNA
Locations
Undetermined

Declared organism:
Escherichia coli

Determined organism:
  • Escherichia coli DH1

    Escherichia coli DH1

    • Public DB hit
      GI:315134697
      AP012030
      1 of 2 hits reported for Escherichia coli DH1.
    • Hit length
      4,621,430 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP012030
      0.03% cov
    • Alignment Length
      1,323 bp
    • CIGAR string
      1323M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli BW2952

    Escherichia coli BW2952

    • Public DB hit
      GI:238859724
      CP001396
    • Hit length
      4,578,159 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001396
      0.03% cov
    • Alignment Length
      1,323 bp
    • CIGAR string
      1323M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli str. K-12 substr. DH10B

    Escherichia coli str. K-12 substr. DH10B

    • Public DB hit
      GI:169887498
      CP000948
    • Hit length
      4,686,137 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000948
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli str. K-12 substr. W3110

    Escherichia coli str. K-12 substr. W3110

    • Public DB hit
      GI:85674274
      AP009048
    • Hit length
      4,646,332 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP009048
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli str. K-12 substr. MG1655

    Escherichia coli str. K-12 substr. MG1655

    • Public DB hit
      GI:48994873
      U00096
      1 of 2 hits reported for Escherichia coli str. K-12 substr. MG1655.
    • Hit length
      4,639,675 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      U00096
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:43313
      X04691
      1 of 3 hits reported for Escherichia coli.
    • Hit length
      4,176 bp
    • E Value
      0E0
    • BLAST Score
      2,444.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      X04691
      31.68% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli UMNK88

    Escherichia coli UMNK88

    • Public DB hit
      GI:332341332
      CP002729
    • Hit length
      5,186,416 bp
    • E Value
      0E0
    • BLAST Score
      2,438.7 bits
    • Similarity
      99.92%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002729
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli BL21(DE3)

    Escherichia coli BL21(DE3)

    • Public DB hit
      GI:313848522
      AM946981
      1 of 2 hits reported for Escherichia coli BL21(DE3).
    • Hit length
      4,558,947 bp
    • E Value
      0E0
    • BLAST Score
      2,422.1 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AM946981
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli B str. REL606

    Escherichia coli B str. REL606

    • Public DB hit
      GI:253972022
      CP000819
    • Hit length
      4,629,812 bp
    • E Value
      0E0
    • BLAST Score
      2,422.1 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000819
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    • Public DB hit
      GI:253322479
      CP001665
    • Hit length
      4,570,938 bp
    • E Value
      0E0
    • BLAST Score
      2,422.1 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001665
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli ATCC 8739

    Escherichia coli ATCC 8739

    • Public DB hit
      GI:169752989
      CP000946
    • Hit length
      4,746,218 bp
    • E Value
      0E0
    • BLAST Score
      2,422.1 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000946
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli HS

    Escherichia coli HS

    • Public DB hit
      GI:157065147
      CP000802
    • Hit length
      4,643,538 bp
    • E Value
      0E0
    • BLAST Score
      2,422.1 bits
    • Similarity
      99.7%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000802
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli SE11

    Escherichia coli SE11

    • Public DB hit
      GI:209910450
      AP009240
    • Hit length
      4,887,515 bp
    • E Value
      0E0
    • BLAST Score
      2,383.3 bits
    • Similarity
      99.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      AP009240
      0.03% cov
    • Alignment Length
      1,323 bp
  • Shigella boydii CDC 3083-94

    Shigella boydii CDC 3083-94

    • Public DB hit
      GI:187427012
      CP001063
    • Hit length
      4,615,997 bp
    • E Value
      0E0
    • BLAST Score
      2,383.3 bits
    • Similarity
      99.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001063
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli E24377A

    Escherichia coli E24377A

    • Public DB hit
      GI:157076741
      CP000800
    • Hit length
      4,979,619 bp
    • E Value
      0E0
    • BLAST Score
      2,383.3 bits
    • Similarity
      99.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000800
      0.03% cov
    • Alignment Length
      1,323 bp
  • Shigella sonnei Ss046

    Shigella sonnei Ss046

    • Public DB hit
      GI:73854091
      CP000038
    • Hit length
      4,825,265 bp
    • E Value
      0E0
    • BLAST Score
      2,383.3 bits
    • Similarity
      99.17%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP000038
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli KO11FL

    Escherichia coli KO11FL

    • Public DB hit
      GI:323376397
      CP002516
    • Hit length
      4,920,168 bp
    • E Value
      0E0
    • BLAST Score
      2,377.8 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002516
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli W

    Escherichia coli W

    • Public DB hit
      GI:315059226
      CP002185
    • Hit length
      4,900,968 bp
    • E Value
      0E0
    • BLAST Score
      2,377.8 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP002185
      0.03% cov
    • Alignment Length
      1,323 bp
  • Shigella flexneri 2002017

    Shigella flexneri 2002017

    • Public DB hit
      GI:281599365
      CP001383
    • Hit length
      4,650,856 bp
    • E Value
      0E0
    • BLAST Score
      2,377.8 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CP001383
      0.03% cov
    • Alignment Length
      1,323 bp
  • Escherichia coli IAI1

    Escherichia coli IAI1

    • Public DB hit
      GI:218359353
      CU928160
    • Hit length
      4,700,560 bp
    • E Value
      0E0
    • BLAST Score
      2,377.8 bits
    • Similarity
      99.09%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      CU928160
      0.03% cov
    • Alignment Length
      1,323 bp
Occurrence
77 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
1,455
Type
DNA
Locations
Undetermined

Declared organism:
Escherichia coli

Determined organism:
  • Escherichia coli DH1

    Escherichia coli DH1

    • Public DB hit
      GI:315134697
      AP012030
      1 of 2 hits reported for Escherichia coli DH1.
    • Hit length
      4,621,430 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AP012030
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli BW2952

    Escherichia coli BW2952

    • Public DB hit
      GI:238859724
      CP001396
    • Hit length
      4,578,159 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001396
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli str. K-12 substr. DH10B

    Escherichia coli str. K-12 substr. DH10B

    • Public DB hit
      GI:169887498
      CP000948
    • Hit length
      4,686,137 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000948
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli str. K-12 substr. W3110

    Escherichia coli str. K-12 substr. W3110

    • Public DB hit
      GI:85674274
      AP009048
    • Hit length
      4,646,332 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AP009048
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli str. K-12 substr. MG1655

    Escherichia coli str. K-12 substr. MG1655

    • Public DB hit
      GI:48994873
      U00096
      1 of 2 hits reported for Escherichia coli str. K-12 substr. MG1655.
    • Hit length
      4,639,675 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      U00096
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli

    Escherichia coli

    • Public DB hit
      GI:43313
      X04691
      1 of 7 hits reported for Escherichia coli.
    • Hit length
      4,176 bp
    • E Value
      0E0
    • BLAST Score
      2,688 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      X04691
      34.84% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      1455M mismatches: 0 - insertions: 0 - deletions: 0
  • Escherichia coli UMNK88

    Escherichia coli UMNK88

    • Public DB hit
      GI:332341332
      CP002729
    • Hit length
      5,186,416 bp
    • E Value
      0E0
    • BLAST Score
      2,643.7 bits
    • Similarity
      99.45%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP002729
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      713MN110MN44MN11MN47MN221MN29MN33MN239M mismatches: 8 - insertions: 0 - deletions: 0
  • Escherichia coli HS

    Escherichia coli HS

    • Public DB hit
      GI:157065147
      CP000802
    • Hit length
      4,643,538 bp
    • E Value
      0E0
    • BLAST Score
      2,638.1 bits
    • Similarity
      99.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000802
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN157MN11MN11MN8MN2MN60MN13MN2MN1107M mismatches: 9 - insertions: 0 - deletions: 0
  • Escherichia coli BL21(DE3)

    Escherichia coli BL21(DE3)

    • Public DB hit
      GI:313848522
      AM946981
      1 of 2 hits reported for Escherichia coli BL21(DE3).
    • Hit length
      4,558,947 bp
    • E Value
      0E0
    • BLAST Score
      2,632.6 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      AM946981
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN157MN11MN11MN8MN2MN60MN13MN2MN908MN198M mismatches: 10 - insertions: 0 - deletions: 0
  • Escherichia coli B str. REL606

    Escherichia coli B str. REL606

    • Public DB hit
      GI:253972022
      CP000819
    • Hit length
      4,629,812 bp
    • E Value
      0E0
    • BLAST Score
      2,632.6 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000819
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN157MN11MN11MN8MN2MN60MN13MN2MN908MN198M mismatches: 10 - insertions: 0 - deletions: 0
  • Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    Escherichia coli 'BL21-Gold(DE3)pLysS AG'

    • Public DB hit
      GI:253322479
      CP001665
    • Hit length
      4,570,938 bp
    • E Value
      0E0
    • BLAST Score
      2,632.6 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001665
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN157MN11MN11MN8MN2MN60MN13MN2MN908MN198M mismatches: 10 - insertions: 0 - deletions: 0
  • Escherichia coli ATCC 8739

    Escherichia coli ATCC 8739

    • Public DB hit
      GI:169752989
      CP000946
    • Hit length
      4,746,218 bp
    • E Value
      0E0
    • BLAST Score
      2,632.6 bits
    • Similarity
      99.31%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP000946
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN157MN11MN11MN8MN2MN60MN13MN2MN777MN329M mismatches: 10 - insertions: 0 - deletions: 0
  • Escherichia coli O55:H7 str. CB9615

    Escherichia coli O55:H7 str. CB9615

    • Public DB hit
      GI:290760697
      CP001846
    • Hit length
      5,386,352 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      98.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001846
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN169MN11MN8MN2MN45MN24MN483MN23MN20MN143MN23MN113MN29MN119MN29MN74MN5MN42M mismatches: 18 - insertions: 0 - deletions: 0
  • Escherichia coli O157:H7 str. TW14359

    Escherichia coli O157:H7 str. TW14359

    • Public DB hit
      GI:254590536
      CP001368
    • Hit length
      5,528,136 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      98.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001368
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN169MN11MN8MN2MN45MN24MN483MN23MN20MN143MN23MN113MN29MN119MN29MN74MN5MN42M mismatches: 18 - insertions: 0 - deletions: 0
  • Escherichia coli O157:H7 str. EC4115

    Escherichia coli O157:H7 str. EC4115

    • Public DB hit
      GI:209157093
      CP001164
    • Hit length
      5,572,075 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      98.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      CP001164
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN169MN11MN8MN2MN45MN24MN483MN23MN20MN143MN23MN113MN29MN119MN29MN74MN5MN42M mismatches: 18 - insertions: 0 - deletions: 0
  • Escherichia coli O157:H7 str. Sakai

    Escherichia coli O157:H7 str. Sakai

    • Public DB hit
      GI:47118301
      BA000007
    • Hit length
      5,498,450 bp
    • E Value
      0E0
    • BLAST Score
      2,588.3 bits
    • Similarity
      98.76%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      BA000007
      0.03% cov
    • Alignment Length
      1,455 bp
    • CIGAR string
      75MN169MN11MN8MN2MN45MN24MN483MN23MN20MN143MN23MN113MN29MN119MN29MN74MN5MN42M mismatches: 18 - insertions: 0 - deletions: 0
Occurrence
90 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
4
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
5
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
6
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
7
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
8
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
9
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
8 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
10
Length
30
Type
DNA
Locations
Undetermined

Declared organism:
Artificial

Determined organism:
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder

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