Soluble, Functional Apoptotic Protease-activating Factor 1 Fragments

  • Published: Oct 7, 2008
  • Earliest Priority: Nov 15 2004
  • Family: 2
  • Cited Works: 53
  • Cited by: 5
  • Cites: 3
  • Sequences: 8
  • Additional Info: Cited Works Full text
Data obtained from: USPTO Fulltext NCBI GenBank EMBL-EBI Pat
8 sequences found in this patent (in total)

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Download sequences in fasta format: 8 peptides

Displaying 8 sequences

SEQ ID NO
Length
Sequence Type
Locations
Declared organism
Determined organism
Occurrence
Tools
SEQ ID NO
1
Length
591
Sequence Type
peptide
Locations
Claims, Detailed Description, Drawings, Summary
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:119618010
      EAW97604
      1 of 19 hits reported for Homo sapiens.
    • Hit length
      1,163 aa
    • E Value
      0E0
    • BLAST Score
      1,226.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      EAW97604
      50.82% cov
    • Alignment Length
      591 aa
    • CIGAR string
      591M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840129
      XP_001151599
      1 of 3 hits reported for Pan troglodytes.
    • Hit length
      1,205 aa
    • E Value
      0E0
    • BLAST Score
      1,223.8 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_001151599
      49.05% cov
    • Alignment Length
      591 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692687
      XP_002823669
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      1,220.3 bits
    • Similarity
      99.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 1
      100% cov
      XP_002823669
      47.36% cov
    • Alignment Length
      591 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
2
Length
1,194
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:4502123
      NP_001151
      1 of 16 hits reported for Homo sapiens.
    • Hit length
      1,194 aa
    • E Value
      0E0
    • BLAST Score
      2,481.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      NP_001151
      100% cov
    • Alignment Length
      1,194 aa
    • CIGAR string
      1194M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114646461
      XP_001151719
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,194 aa
    • E Value
      0E0
    • BLAST Score
      2,472.2 bits
    • Similarity
      99.83%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_001151719
      100% cov
    • Alignment Length
      1,194 aa
    • CIGAR string
      244MN533MN23MN11MN133MN21MN223M mismatches: 6 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692689
      XP_002823670
    • Hit length
      1,194 aa
    • E Value
      0E0
    • BLAST Score
      2,457.6 bits
    • Similarity
      99.41%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 2
      100% cov
      XP_002823670
      100% cov
    • Alignment Length
      1,194 aa
Occurrence
85 times in PatSeqDB
Tools
SEQ ID NO
3
Length
1,205
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:5869870
      CAB55579
      1 of 18 hits reported for Homo sapiens.
    • Hit length
      1,205 aa
    • E Value
      0E0
    • BLAST Score
      2,504.9 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      CAB55579
      100% cov
    • Alignment Length
      1,205 aa
    • CIGAR string
      1205M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840129
      XP_001151599
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,205 aa
    • E Value
      0E0
    • BLAST Score
      2,492.2 bits
    • Similarity
      99.75%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_001151599
      100% cov
    • Alignment Length
      1,205 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221209
      XP_003259753
    • Hit length
      1,205 aa
    • E Value
      0E0
    • BLAST Score
      2,452.6 bits
    • Similarity
      98.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      XP_003259753
      100% cov
    • Alignment Length
      1,205 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
4
Length
1,237
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:20521041
      BAA24843
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      1,237 aa
    • E Value
      0E0
    • BLAST Score
      2,571.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      BAA24843
      100% cov
    • Alignment Length
      1,237 aa
    • CIGAR string
      1229MN7M mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114646457
      XP_001151785
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,237 aa
    • E Value
      0E0
    • BLAST Score
      2,561.2 bits
    • Similarity
      99.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001151785
      100% cov
    • Alignment Length
      1,237 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692685
      XP_002823668
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,237 aa
    • E Value
      0E0
    • BLAST Score
      2,549.2 bits
    • Similarity
      99.43%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_002823668
      100% cov
    • Alignment Length
      1,237 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221213
      XP_003259755
      1 of 2 hits reported for Nomascus leucogenys.
    • Hit length
      1,237 aa
    • E Value
      0E0
    • BLAST Score
      2,521.5 bits
    • Similarity
      98.71%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_003259755
      100% cov
    • Alignment Length
      1,237 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098379
      XP_001086945
      1 of 2 hits reported for Macaca mulatta.
    • Hit length
      1,237 aa
    • E Value
      0E0
    • BLAST Score
      2,488.4 bits
    • Similarity
      98.38%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 4
      100% cov
      XP_001086945
      100% cov
    • Alignment Length
      1,237 aa
Occurrence
58 times in PatSeqDB
Tools
SEQ ID NO
5
Length
1,248
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Homo sapiens
Determined organism
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:32483359
      NP_863651
      1 of 7 hits reported for Homo sapiens.
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      2,593.1 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      NP_863651
      100% cov
    • Alignment Length
      1,248 aa
    • CIGAR string
      1248M mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332840131
      XP_003313928
      1 of 2 hits reported for Pan troglodytes.
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      2,582 bits
    • Similarity
      99.84%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003313928
      100% cov
    • Alignment Length
      1,248 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297692687
      XP_002823669
      1 of 2 hits reported for Pongo abelii.
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      2,569.3 bits
    • Similarity
      99.44%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_002823669
      100% cov
    • Alignment Length
      1,248 aa
  • Nomascus leucogenys

    Nomascus leucogenys

    • Public DB hit
      GI:332221211
      XP_003259754
      1 of 3 hits reported for Nomascus leucogenys.
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      2,538.8 bits
    • Similarity
      98.72%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_003259754
      100% cov
    • Alignment Length
      1,248 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:109098377
      XP_001087067
      1 of 3 hits reported for Macaca mulatta.
    • Hit length
      1,248 aa
    • E Value
      0E0
    • BLAST Score
      2,496.8 bits
    • Similarity
      98.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 5
      100% cov
      XP_001087067
      100% cov
    • Alignment Length
      1,248 aa
Occurrence
64 times in PatSeqDB
Tools
SEQ ID NO
6
Length
600
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Danio rerio
Determined organism
  • Danio rerio

    Danio rerio

    • Public DB hit
      GI:18858279
      NP_571683
      1 of 3 hits reported for Danio rerio.
    • Hit length
      1,261 aa
    • E Value
      0E0
    • BLAST Score
      1,232.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_571683
      47.58% cov
    • Alignment Length
      600 aa
    • CIGAR string
      600M mismatches: 0 - insertions: 0 - deletions: 0
  • Ornithorhynchus anatinus

    Ornithorhynchus anatinus

    • Public DB hit
      GI:149637799
      XP_001505891
      1 of 4 hits reported for Ornithorhynchus anatinus.
    • Hit length
      1,250 aa
    • E Value
      0E0
    • BLAST Score
      762.7 bits
    • Similarity
      77.87%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001505891
      47.84% cov
    • Alignment Length
      601 aa
  • Canis lupus familiaris

    Canis lupus familiaris

    • Public DB hit
      GI:73977674
      XP_866491
      1 of 4 hits reported for Canis lupus familiaris.
    • Hit length
      1,165 aa
    • E Value
      0E0
    • BLAST Score
      746.1 bits
    • Similarity
      77.37%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_866491
      51.42% cov
    • Alignment Length
      601 aa
  • Rattus norvegicus

    Rattus norvegicus

    • Public DB hit
      GI:13027436
      NP_076469
    • Hit length
      1,249 aa
    • E Value
      0E0
    • BLAST Score
      742.7 bits
    • Similarity
      77.67%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      NP_076469
      47.88% cov
    • Alignment Length
      600 aa
  • Equus caballus

    Equus caballus

    • Public DB hit
      GI:149742932
      XP_001495685
    • Hit length
      1,249 aa
    • E Value
      0E0
    • BLAST Score
      742.7 bits
    • Similarity
      77.33%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 6
      100% cov
      XP_001495685
      47.88% cov
    • Alignment Length
      600 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
7
Length
588
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Drosophila melanogaster
Determined organism
  • Drosophila melanogaster

    Drosophila melanogaster

    • Public DB hit
      GI:24654313
      NP_725637
      1 of 5 hits reported for Drosophila melanogaster.
    • Hit length
      1,440 aa
    • E Value
      0E0
    • BLAST Score
      1,216.4 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      NP_725637
      40.83% cov
    • Alignment Length
      588 aa
    • CIGAR string
      588M mismatches: 0 - insertions: 0 - deletions: 0
  • Drosophila simulans

    Drosophila simulans

    • Public DB hit
      GI:195584102
      XP_002081854
    • Hit length
      1,421 aa
    • E Value
      0E0
    • BLAST Score
      1,127.5 bits
    • Similarity
      95.58%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002081854
      41.31% cov
    • Alignment Length
      588 aa
  • Drosophila sechellia

    Drosophila sechellia

    • Public DB hit
      GI:195335111
      XP_002034219
    • Hit length
      1,440 aa
    • E Value
      0E0
    • BLAST Score
      1,122.1 bits
    • Similarity
      95.07%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002034219
      40.76% cov
    • Alignment Length
      588 aa
  • Drosophila yakuba

    Drosophila yakuba

    • Public DB hit
      GI:195488858
      XP_002092491
    • Hit length
      1,455 aa
    • E Value
      0E0
    • BLAST Score
      1,041.6 bits
    • Similarity
      90.89%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002092491
      40.76% cov
    • Alignment Length
      593 aa
  • Drosophila erecta

    Drosophila erecta

    • Public DB hit
      GI:194882343
      XP_001975271
    • Hit length
      1,453 aa
    • E Value
      0E0
    • BLAST Score
      1,017.7 bits
    • Similarity
      89.06%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001975271
      40.88% cov
    • Alignment Length
      594 aa
  • Drosophila ananassae

    Drosophila ananassae

    • Public DB hit
      GI:194756644
      XP_001960586
    • Hit length
      1,482 aa
    • E Value
      0E0
    • BLAST Score
      851.3 bits
    • Similarity
      83.96%
    • Coverage
      98.64%
    • Alignment (schematic)

      SEQ ID NO 7
      98.64% cov
      XP_001960586
      39.54% cov
    • Alignment Length
      586 aa
  • Drosophila pseudoobscura pseudoobscura

    Drosophila pseudoobscura pseudoobscura

    • Public DB hit
      GI:198457904
      XP_001360832
    • Hit length
      1,489 aa
    • E Value
      0E0
    • BLAST Score
      816.6 bits
    • Similarity
      79.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_001360832
      39.83% cov
    • Alignment Length
      596 aa
  • Drosophila persimilis

    Drosophila persimilis

    • Public DB hit
      GI:195151137
      XP_002016504
    • Hit length
      1,489 aa
    • E Value
      0E0
    • BLAST Score
      816.6 bits
    • Similarity
      79.36%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 7
      100% cov
      XP_002016504
      39.83% cov
    • Alignment Length
      596 aa
Occurrence
2 times in PatSeqDB
Tools
SEQ ID NO
8
Length
549
Sequence Type
peptide
Locations
Detailed Description, Drawings
Declared organism
Caenorhabditis elegans
Determined organism
  • Caenorhabditis elegans

    Caenorhabditis elegans

    • Public DB hit
      GI:71982942
      NP_001021202
      1 of 2 hits reported for Caenorhabditis elegans.
    • Hit length
      549 aa
    • E Value
      0E0
    • BLAST Score
      1,136.7 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 8
      100% cov
      NP_001021202
      100% cov
    • Alignment Length
      549 aa
    • CIGAR string
      549M mismatches: 0 - insertions: 0 - deletions: 0
  • Caenorhabditis briggsae

    Caenorhabditis briggsae

    • Public DB hit
      GI:261260057
      Q60Z52
      1 of 2 hits reported for Caenorhabditis briggsae.
    • Hit length
      569 aa
    • E Value
      0E0
    • BLAST Score
      925.2 bits
    • Similarity
      87.22%
    • Coverage
      99.64%
    • Alignment (schematic)

      SEQ ID NO 8
      99.64% cov
      Q60Z52
      99.65% cov
    • Alignment Length
      571 aa
    • CIGAR string
      10M2N3MN2MN13M2N7MN3MNMN11MN8MN6MN4MN2MN3M2NM2N2M3N2MN5M2NMN19MNM2N2MN6MN8MN9MN25MN8MN2MN7MN5M24I23MN12MN6MN13MN12M2N7MN2M2N2M3N2MN4MNM2NM2N2MNMN3MNMN5MN3MN16MN3MN3M3N6MN4M3N20MN4MN5MN14MN24MN4MN4MN2MN7MN14MNMN4M3N4MN2M3D4MN2M2NMN2MDNM2N6M2N4MNM2N6MNMN2H mismatches: 98 - insertions: 24 - deletions: 4
  • Caenorhabditis remanei

    Caenorhabditis remanei

    • Public DB hit
      GI:308487592
      XP_003105991
    • Hit length
      397 aa
    • E Value
      3.24E-172
    • BLAST Score
      610.5 bits
    • Similarity
      86.25%
    • Coverage
      63.21%
    • Alignment (schematic)

      SEQ ID NO 8
      63.21% cov
      XP_003105991
      93.45% cov
    • Alignment Length
      371 aa
Occurrence
14 times in PatSeqDB
Tools

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