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Search for Biological Sequences disclosed in Patents

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Data obtained from: EPO Sequence Listings
3 sequences found in this patent (in total)

Displaying 3 sequences

SEQ ID NO
Length
Type
Locations
Organisms
Occurrence
Tools
SEQ ID NO
1
Length
1,448
Type
DNA
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:312261220
      NM_004203
      1 of 14 hits reported for Homo sapiens.
    • Hit length
      2,187 bp
    • E Value
      0E0
    • BLAST Score
      2,577.2 bits
    • Similarity
      100%
    • Coverage
      96.34%
    • Alignment (schematic)

      SEQ ID NO 1
      96.34% cov
      NM_004203
      63.79% cov
    • Alignment Length
      1,395 bp
    • CIGAR string
      45H1395M8H mismatches: 0 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:332845137
      XM_001164588
      1 of 6 hits reported for Pan troglodytes.
    • Hit length
      1,930 bp
    • E Value
      0E0
    • BLAST Score
      2,560.6 bits
    • Similarity
      99.78%
    • Coverage
      96.34%
    • Alignment (schematic)

      SEQ ID NO 1
      96.34% cov
      XM_001164588
      72.28% cov
    • Alignment Length
      1,395 bp
    • CIGAR string
      45H424M2N637MN331M8H mismatches: 3 - insertions: 0 - deletions: 0
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:297697895
      XM_002826028
    • Hit length
      2,055 bp
    • E Value
      0E0
    • BLAST Score
      2,453.5 bits
    • Similarity
      98.42%
    • Coverage
      96.34%
    • Alignment (schematic)

      SEQ ID NO 1
      96.34% cov
      XM_002826028
      67.79% cov
    • Alignment Length
      1,395 bp
    • CIGAR string
      45H11MN91MN41MN62MN3MN142MN62MN6MN349MN17MN160MN54MN53MN21MN2MN74MN93MN33M2D7MN24MN30MN38M8H mismatches: 20 - insertions: 0 - deletions: 2
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:33304050
      AY335706
      1 of 2 hits reported for synthetic construct.
    • Hit length
      1,494 bp
    • E Value
      0E0
    • BLAST Score
      2,305.7 bits
    • Similarity
      100%
    • Coverage
      86.19%
    • Alignment (schematic)

      SEQ ID NO 1
      86.19% cov
      AY335706
      83.53% cov
    • Alignment Length
      1,248 bp
    • CIGAR string
      45H1248M155H mismatches: 0 - insertions: 0 - deletions: 0
Occurrence
3 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
2
Length
479
Type
peptide
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • synthetic construct

    synthetic construct

    • Public DB hit
      GI:33304051
      AAQ02533
    • Hit length
      498 aa
    • E Value
      0E0
    • BLAST Score
      831.2 bits
    • Similarity
      99.76%
    • Coverage
      86.85%
    • Alignment (schematic)

      SEQ ID NO 2
      86.85% cov
      AAQ02533
      83.53% cov
    • Alignment Length
      416 aa
    • CIGAR string
      14HN415M49H mismatches: 1 - insertions: 0 - deletions: 0
  • Homo sapiens

    Homo sapiens

    • Public DB hit
      GI:386642875
      NP_001245379
      1 of 8 hits reported for Homo sapiens.
    • Hit length
      430 aa
    • E Value
      0E0
    • BLAST Score
      831.2 bits
    • Similarity
      99.76%
    • Coverage
      86.85%
    • Alignment (schematic)

      SEQ ID NO 2
      86.85% cov
      NP_001245379
      96.74% cov
    • Alignment Length
      416 aa
    • CIGAR string
      14HN415M49H mismatches: 1 - insertions: 0 - deletions: 0
  • Pan troglodytes

    Pan troglodytes

    • Public DB hit
      GI:114660546
      XP_001164588
      1 of 4 hits reported for Pan troglodytes.
    • Hit length
      430 aa
    • E Value
      0E0
    • BLAST Score
      828.9 bits
    • Similarity
      99.52%
    • Coverage
      86.85%
    • Alignment (schematic)

      SEQ ID NO 2
      86.85% cov
      XP_001164588
      96.74% cov
    • Alignment Length
      416 aa
  • Pongo abelii

    Pongo abelii

    • Public DB hit
      GI:395747381
      XP_003778595
      1 of 3 hits reported for Pongo abelii.
    • Hit length
      430 aa
    • E Value
      0E0
    • BLAST Score
      823.5 bits
    • Similarity
      99.28%
    • Coverage
      86.85%
    • Alignment (schematic)

      SEQ ID NO 2
      86.85% cov
      XP_003778595
      96.74% cov
    • Alignment Length
      416 aa
  • Macaca mulatta

    Macaca mulatta

    • Public DB hit
      GI:355709887
      EHH31351
    • Hit length
      490 aa
    • E Value
      0E0
    • BLAST Score
      817 bits
    • Similarity
      98.8%
    • Coverage
      86.85%
    • Alignment (schematic)

      SEQ ID NO 2
      86.85% cov
      EHH31351
      84.9% cov
    • Alignment Length
      416 aa
  • Mus musculus

    Mus musculus

    • Public DB hit
      GI:9957091
      AAG09210
    • Hit length
      490 aa
    • E Value
      0E0
    • BLAST Score
      737.6 bits
    • Similarity
      92.96%
    • Coverage
      86.01%
    • Alignment (schematic)

      SEQ ID NO 2
      86.01% cov
      AAG09210
      84.08% cov
    • Alignment Length
      412 aa
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder
SEQ ID NO
3
Length
498
Type
peptide
Locations
Undetermined

Declared organism:
Not specified

Determined organism:
  • Xenopus laevis

    Xenopus laevis

    • Public DB hit
      GI:148224096
      NP_001079935
    • Hit length
      548 aa
    • E Value
      0E0
    • BLAST Score
      1,024.2 bits
    • Similarity
      100%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001079935
      90.88% cov
    • Alignment Length
      498 aa
    • CIGAR string
      498M mismatches: 0 - insertions: 0 - deletions: 0
  • Xenopus (Silurana) tropicalis

    Xenopus (Silurana) tropicalis

    • Public DB hit
      GI:187608141
      NP_001120631
    • Hit length
      549 aa
    • E Value
      0E0
    • BLAST Score
      913.3 bits
    • Similarity
      96.4%
    • Coverage
      100%
    • Alignment (schematic)

      SEQ ID NO 3
      100% cov
      NP_001120631
      90.89% cov
    • Alignment Length
      500 aa
    • CIGAR string
      5MN2MN23M2N3MN7MN7MN54MN15MN19MNMN4M2N98MN10MN17MN43MN8MNMN3MN5MN19MN2MD28MN3MN53MNMNM2I2MN18M2N7MN8M mismatches: 30 - insertions: 2 - deletions: 1
Occurrence
4 times in PatSeqDB
Tools
PatSeq Finder

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