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The present invention also relates to isolated genes of the chromosome of Bacillus licheniformis which encode biologically active substances and to nucleic acid constructs, vectors, and host cells comprising the genes as well as methods for producing biologically active substances encoded by the genes and to methods of using the isolated genes of the complete chromosome of Bacillus licheniformis.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"}]},"abstract_lang":["en"],"has_abstract":true,"claim":{"en":[{"text":"1. An isolated polypeptide having cellulose 1,4-beta-cellobiosidase activity, selected from the group consisting of: (a) a polypeptide having cellulose 1,4-beta-cellobiosidase activity comprising an amino acid sequence having at least 95% identity with the amino acid sequence of SEQ ID NO: 5979; and (b) a polypeptide having cellulose 1,4-beta-cellobiosidase activity encoded by a gene comprising a nucleotide sequence which hybridizes under high stringency conditions with the nucleotide sequence of SEQ ID NO: 1782, or the full-length complementary strand thereof, wherein high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and 50% formamide, and washing three times each for 15 minutes using 2×SSC, 0.2% SDS at 65° C.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"2. The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1 , which comprises an amino acid sequence having at least 95% identity with the amino acid sequence of SEQ ID NO: 5979.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"3. The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1 , which is encoded by a gene comprising a nucleotide sequence which hybridizes under high stringency conditions with the nucleotide sequence of SEQ ID NO: 1782, or the full-length complementary strand thereof, wherein high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and 50% a formamide, and washing three times each for 15 minutes using 2×SSC, 0.2% a SDS at 65° C.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"4. The polypeptide having cellulose 2,4-beta-cellobiosidase activity of claim 1 , which is encoded by a Bacillus licheniformis ATCC 14580 gene.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"5. The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 2 , which comprises an amino acid sequence having at least 97% a identity with the amino acid sequence of SEQ ID NO: 5979.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"6. The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1 , which comprises the amino acid sequence of SEQ ID NO: 5979.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"},{"text":"7. The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1 , which consists of the amino acid sequence of SEQ ID NO: 5979, or a fragment thereof which retains cellulose 1,4-beta-cellobiosidase activity.","lang":"en","source":"USPTO_FULLTEXT","data_format":"ORIGINAL"}]},"claim_lang":["en"],"has_claim":true,"description":{"en":{"text":"CROSS-REFERENCE TO RELATED APPLICATIONS This application claims the benefit of U.S. Provisional Application No. 60/535,988, filed Jan. 9, 2004, U.S. Provisional Application No. 60/561,059, filed Apr. 8, 2004, and U.S. Provisional Application No. 60/572,403, filed May 18, 2004, which applications are incorporated herein by reference. BACKGROUND OF THE INVENTION 1. Field of the Invention The present invention relates to an isolated polynucleotide molecule comprising the complete chromosome of Bacillus licheniformis . The present invention also relates to features (genes) of the complete chromosomal DNA molecule of Bacillus licheniformis which encode biologically active substances and to nucleic acid constructs, vectors, and host cells comprising the features as well as methods for producing biologically active substances encoded by the features and to methods of using the isolated features derived from the complete chromosomal DNA molecule of Bacillus licheniformis. 2. Description of the Related Art Microbes, which make up most of the earth's biomass, have evolved for some 3.8 billion years. They are found in virtually every environment, surviving and thriving in extremes of heat, cold, radiation, pressure, salt, acidity, and darkness. Often in these environments, no other forms of life are found and the only nutrients come from inorganic matter. The diversity and range of their environmental adaptations indicate that microbes long ago “solved” many problems for which scientists are still actively seeking solutions. The value in determining the complete genome sequence of microbes is that it provides a detailed blueprint for the organism revealing all of the biochemical pathways, substrates, intermediates, and end products as well as regulatory networks, and evolutionary relationships to other microbes. A complete manifest of proteins, both structural and catalytic, is encoded as a list of features in the DNA molecule comprising the genome, as well as their likely cellular location. Knowledge about the enormous range of microbial capacities has broad and far-reaching implications for environmental, energy, health, and industrial applications, such as cleanup of toxic-waste, production of novel therapeutic and preventive agents (drugs and vaccines), energy generation and development of renewable energy sources, production of chemical catalysts, reagents, and enzymes to improve efficiency of industrial processes, management of environmental carbon, nitrogen and nutrient cycling, detection of disease-causing organisms and monitoring of the safety of food and water supplies, use of genetically altered bacteria as living sensors (biosensors) to detect harmful chemicals in soil, air, or water, and understanding of specialized systems used by microbial cells to live in natural environments. Bacillus licheniformis is a gram positive spore-forming bacterium that is widely distributed as a saprophytic organism in the environment. Unlike most other bacilli that are predominantly aerobic, Bacillus licheniformis is a facultative anaerobe which may allow it to grow in additional ecological niches. This species produces a diverse assortment of extracellular enzymes that are believed to contribute to the process of nutrient cycling in nature (Claus, D. and Berkeley, R. C. W., 1986, In Bergey's Manual of Systematic Bacteriology , Vol. 2., eds. Sneath, P. H. A. et al., Williams and Wilkins Co., Baltimore, Md., pp. 1105-1139). Certain Bacillus licheniformis isolates are capable of denitrification, however, the relevance of this characteristic to environmental denitrification may be small since the species generally persists in soil as endospores (Alexander, M., 1977 , Introduction to Soil Microbiology . John Wiley and Sons, Inc., New York). There are numerous industrial and agricultural uses for Bacillus licheniformis and its extracellular products. The species has been used for decades in the manufacture of industrial enzymes including several proteases, α-amylase, penicillinase, pentosanase, cycloglucosyltransferase, β-mannanase, and several pectinolytic enzymes, owing largely to its ability to secrete sizeable amounts of degradative enzymes. Bacillus licheniformis is also used to produce peptide antibiotics such as bacitracin and proticin, in addition to a number of specialty chemicals such as citric acid, inosine, inosinic acid, and poly-γ-glutamic acid. The proteases from Bacillus licheniformis are used in the detergent industry as well as for dehairing and batting of leather (Eveleigh, D. E., 1981 , Scientific American 245, 155-178). Amylases from Bacillus licheniformis are deployed for the hydrolysis of starch, desizing of textiles, and sizing of paper (Erickson, R. J., 1976, In Microbiology , ed. Schlesinger, D. (Am. Soc. Microbiol., Washington, D.C.), pp. 406-419.). Certain strains of Bacillus licheniformis have shown efficacy to destroy fungal pathogens affecting maize, grasses, and vegetable crops (U.S. Pat. Nos. 5,589,381; 5,665,354). As an endospore-forming bacterium, the ability of the organism to survive under unfavorable environmental conditions may enhance its potential as a natural control agent. Bacillus licheniformis can be differentiated from other bacilli on the basis of metabolic and physiological tests (Logan, N. A. and Berkeley, R. C. W., 1981, In The Aerobic Endospore - Forming Bacteria: Classification and Identification , eds. Berkeley, R. C. W. and Goodfellow, M., Academic Press, Inc., London, pp. 106-140; O'Donnell, A. G., Norris, J. R., Berkeley, R. C. W., Claus, D., Kanero, T., Logan, N. A., and Nozaki, R., 1980 , Internat. J. Systematic Bacteriol. 30: 448-459). However, biochemical and phenotypic characteristics may be ambiguous among closely related species. Lapidus et al. (Lapidus, A., Galleron, N., Andersen, J. T., Jørgensen, P. L. Ehrlich, S. D., and Sorokin, A., 2002 , FEMS Microbiol. Lett. 209: 23-30) recently constructed a physical map of the Bacillus licheniformis chromosome using a PCR approach, and established a number of regions of co-linearity where gene content and organization were ostensibly conserved with the Bacillus subtilis chromosome. It would be advantageous to the art to have available the complete primary structure of the chromosomal DNA molecule of the Bacillus licheniformis type strain ATCC 14580. With the complete chromosome data in hand, it should be possible to do comparative genomics and proteomics studies that can lead to improved industrial strains as well as to a better understanding of genome evolution among closely-related bacilli in the subtilis - licheniformis group. It is an object of the present invention to provide an isolated polynucleotide with the sequence of the complete chromosome of Bacillus licheniformis. SUMMARY OF THE INVENTION The present invention relates to an isolated polynucleotide of the complete chromosomal DNA molecule of Bacillus licheniformis ATCC 14580 having the nucleotide sequence of SEQ ID NO: 1. The present invention also relates to isolated features (genes) of the complete chromosomal DNA molecule of Bacillus licheniformis ATCC 14580 encoding biologically active substances, selected from the group consisting of: (a) a gene comprising a nucleotide sequence having at least 60% identity with any of the polynucleotides of SEQ ID NOs: 2-4198; and (b) a gene comprising a nucleotide sequence which hybridizes under at least medium stringency conditions with any of the polynucleotides of SEQ ID NOs: 2-4198, or a complementary strand thereof. The present invention also relates to biologically active substances encoded by the isolated genes, and nucleic acid constructs, vectors, and host cells comprising the genes. The present invention also relates to methods for producing such substances having biological activity comprising (a) cultivating a recombinant host cell comprising a nucleic acid construct comprising a gene encoding the biologically active substance under conditions suitable for production of the biologically active substance; and (b) recovering the biologically active substance. The present invention also relates to methods for monitoring differential expression of a plurality of genes in a first bacterial cell relative to expression of the same genes in one or more second bacterial cells, comprising: (a) adding a mixture of detection reporter-labeled nucleic acids isolated from the bacterial cells to a substrate containing an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198, under conditions where the detection reporter-labeled nucleic acids hybridize to complementary sequences of the Bacillus licheniformis genes on the array, wherein the nucleic acids from the first bacterial cell and the one or more second bacterial cells are labeled with a first detection reporter and one or more different second detection reporters, respectively; and (b) examining the array under conditions wherein the relative expression of the genes in the bacterial cells is determined by the observed detection signal of each spot on the array in which (i) the Bacillus licheniformis genes on the array that hybridize to the nucleic acids obtained from either the first or the one or more second bacterial cells produce a distinct first detection signal or one or more second detection signals, respectively, and (ii) the Bacillus licheniformis genes on the array that hybridize to the nucleic acids obtained from both the first and one or more second bacterial produce a distinct combined detection signal. The present invention also relates to methods for isolating a gene encoding an enzyme, comprising: (a) adding a mixture of labeled first nucleic acid probes, isolated from a microbial strain cultured on medium without an inducing substrate, and labeled second nucleic acid probes, isolated from the microbial strain cultured on medium with the inducing substrate, to an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198, under conditions where the labeled nucleic acid probes hybridize to complementary sequences of the Bacillus licheniformis genes on the array, wherein the first nucleic acid probes are labeled with a first reporter and the second nucleic acid probes are labeled with a second reporter; (b) examining the array under conditions wherein the relative expression of the genes of the microbial strain is determined by the observed hybridization reporter signal of each spot on the array in which (i) the Bacillus licheniformis genes on the array that hybridize to the first nucleic acid probes produce a distinct first hybridization reporter signal or the second nucleic acid probes produce a distinct second hybridization reporter signal, and (ii) the Bacillus licheniformis genes on the array that hybridize to both the first and second nucleic acid probes produce a distinct combined hybridization reporter signal; and (c) isolating a gene from the microbial strain that encodes an enzyme that degrades or converts the substrate. The present invention also relates to genes isolated by such methods and nucleic acid constructs, vectors, and host cells containing the genes. DEFINITIONS Biologically active substance: The term “biologically active substance” is defined herein as any substance which is encoded by a single gene or a series of genes (contiguous or non-contiguous) composing a biosynthetic or metabolic pathway or operon or may be the direct or indirect result of the product of a single gene or products of a series of genes of the Bacillus licheniformis chromosome. Such substances include, but are not limited to, biopolymers, metabolites, and cellular structures and components (e.g., ribosome, flagella, etc.). For purposes of the present invention, biological activity is determined according to procedures known in the art such as those described by Carpenter and Sabatini, 2004 , Nature 5: 11-22; Sordie et al., 2003 , Proceedings of the National Academy of Sciences USA 100: 11964-11969; Braun and LaBaer, 2003 , TRENDS in Biotechnology 21: 383-388; and Kaberdin and McDowall, 2003 , Genome Research 13: 1961-1965. In the methods of the present invention, the biopolymer may be any biopolymer. The term “biopolymer” is defined herein as a chain (or polymer) of identical, similar, or dissimilar subunits (monomers). The biopolymer may be, but is not limited to, a nucleic acid, polyamine, polyol, polypeptide (or polyamide), or polysaccharide. In a preferred aspect, the biopolymer is a polypeptide. The polypeptide may be any polypeptide having a biological activity of interest. The term “polypeptide” is not meant herein to refer to a specific length of the encoded product and, therefore, encompasses peptides, oligopeptides, and proteins. The term “polypeptide” also encompasses naturally occurring allelic variations. In a preferred aspect, the polypeptide is an antibody, antigen, antimicrobial peptide, enzyme, growth factor, hormone, immunodilator, neurotransmitter, receptor, reporter protein, structural protein, transcription factor, and transporter. In a more preferred aspect, the polypeptide is an oxidoreductase, transferase, hydrolase, lyase, isomerase, or ligase. In a most preferred aspect, the polypeptide is an alpha-glucosidase, aminopeptidase, amylase, carbohydrase, carboxypeptidase, catalase, cellulase, chitinase, cutinase, cyclodextrin glycosyltransferase, deoxyribonuclease, esterase, alpha-galactosidase, beta-galactosidase, glucoamylase, glucocerebrosidase, alpha-glucosidase, beta-glucosidase, invertase, laccase, lipase, mannosidase, mutanase, oxidase, pectinolytic enzyme, peroxidase, phospholipase, phytase, polyphenoloxidase, proteolytic enzyme, ribonuclease, transglutaminase, urokinase, or xylanase. In another preferred aspect, the polypeptide is a collagen or gelatin. In another preferred aspect, the biopolymer is a polysaccharide. The polysaccharide may be any polysaccharide, including, but not limited to, a mucopolysaccharide (e.g., heparin and hyaluronic acid) and a nitrogen-containing polysaccharide (e.g., chitin). In a more preferred aspect, the polysaccharide is hyaluronic acid (hyaluronan). In the methods of the present invention, the metabolite may be any metabolite. The metabolite may be encoded by one or more genes, such as a biosynthetic or metabolic pathway. The term “metabolite” encompasses both primary and secondary metabolites. Primary metabolites are products of primary or general metabolism of a cell, which are concerned with energy metabolism, growth, and structure. Secondary metabolites are products of secondary metabolism (see, for example, R. B. Herbert, The Biosynthesis of Secondary Metabolites , Chapman and Hall, New York, 1981). The primary metabolite may be, but is not limited to, an amino acid, fatty acid, nucleoside, nucleotide, sugar, triglyceride, or vitamin. The secondary metabolite may be, but is not limited to, an alkaloid, coumarin, flavonoid, polyketide, quinine, steroid, peptide, or terpene. In a preferred aspect, the secondary metabolite is an antibiotic, antifeedant, attractant, bacteriocide, fungicide, hormone, insecticide, or rodenticide. Isolated biologically active substance: The term “isolated biologically active substance” is defined herein as a substance which is at least about 20% pure, preferably at least about 40% pure, more preferably about 60% pure, even more preferably about 80% pure, most preferably about 90% pure, and even most preferably about 95% pure, as determined by SDS-PAGE, HPLC, capillary electrophoresis, or any other method used in the art. Substantially pure biologically active substance or pure biologically active substance: The term “substantially pure biologically active substance” is defined herein as a biologically active substance preparation which contains at most 10%, preferably at most 8%, more preferably at most 6%, more preferably at most 5% by weight, more preferably at most 4%, at most 3%, even more preferably at most 2%, most preferably at most 1%, and even most preferably at most 0.5% by weight of other material with which it is natively associated. It is, therefore, preferred that the substantially pure biologically active substance is at least 92% pure, preferably at least 94% pure, more preferably at least 95% pure, more preferably at least 96% pure, more preferably at least 96% pure, more preferably at least 97% pure, even more preferably at least 98% pure, most preferably at least 99%, and even most preferably at least 99.5% pure by weight of the total material present in the preparation. The term “pure biologically active substance” is defined as a biologically active substance preparation which contains no other material with which it is natively associated. The biologically active substances of the present invention are preferably in a substantially pure form. In particular, it is preferred that the biologically active substances are in “essentially pure form”, i.e., that the biologically active substance preparation is essentially free of other material with which it is natively associated. This can be accomplished, for example, by preparing the biologically active substance by means of well-known recombinant methods or by classical purification methods. Identity: The relatedness between two amino acid sequences or between two nucleotide sequences is described by the parameter “identity”. For purposes of the present invention, the degree of identity between two amino acid sequences is determined by the Smith-Waterman Protein method for the Genematcher2, as implemented by Paracel Inc. (Pasadena, Calif.), or the BLASTP method as described by Altschul et al., 1990 , Journal of Molecular Biology 215: 403-410. For purposes of the present invention, the degree of identity between two nucleotide sequences is determined by the Smith Waterman nucleotide method for the Genematcher2 or BLASTN for the BlastMachine as implemented by Paracel Inc. Polypeptide Fragment: The term “polypeptide fragment” is defined herein as a polypeptide, which retains biological activity, having one or more amino acids deleted from the amino and/or carboxyl terminus of a polypeptide encoded by any of the genes of the present invention, i.e., polypeptides of SEQ ID NOs: 4199-8395. Preferably, a fragment contains at least 80%, preferably at least 85%, more preferably at least 90%, even more preferably at least 95%, and most preferably at least 97% of the amino acid residues of the mature encoded polypeptide product. Subsequence: The term “subsequence” is defined herein as a polynucleotide comprising a nucleotide sequence of any of SEQ ID NOs: 2-4198 except that one or more nucleotides have been deleted from the 5′ and/or 3′ end. Preferably, a subsequence contains at least 80%, preferably at least 85%, more preferably at least 90%, even more preferably at least 95%, and most preferably at least 97% of the nucleotides of any of the genes of the present invention. Allelic variant: The term “allelic variant” denotes herein any of two or more alternative forms of a gene occupying the same chromosomal locus. Allelic variation arises naturally through mutation, and may result in polymorphism within populations. Gene mutations can be silent (no change in the encoded polypeptide) or may encode polypeptides having altered amino acid sequences. An allelic variant of a polypeptide is a polypeptide encoded by an allelic variant of a gene. Substantially pure polynucleotide or pure polynucleotide: The term “substantially pure polynucleotide” as used herein refers to a polynucleotide preparation free of other extraneous or unwanted nucleotides and is in a form suitable for use within genetically engineered production systems. Thus, a substantially pure polynucleotide contains at most 10%, preferably at most 8%, more preferably at most 6%, more preferably at most 5%, more preferably at most 4%, more preferably at most 3%, even more preferably at most 2%, most preferably at most 1%, and even most preferably at most 0.5% by weight of other polynucleotide material with which it is natively associated. A substantially pure polynucleotide may, however, include naturally occurring 5′ and 3′ untranslated regions, such as promoters and terminators. It is preferred that the substantially pure polynucleotide is at least 92% pure, preferably at least 94% pure, more preferably at least 95% pure, moire preferably at least 96% pure, more preferably at least 96% pure, more preferably at least 97% pure, more preferably at least 98% pure, most preferably at least 99%, and even most preferably at least 99.5% pure by weight. The polynucleotides of the present invention are preferably in a substantially pure form. In particular, it is preferred that the polynucleotides disclosed herein are in “essentially pure form”, i.e., that the polynucleotide preparation is essentially free of other polynucleotide material with which it is natively associated. The term “pure polynucleotide” is defined as a polynucleotide preparation which contains no other material with which it is natively associated. Nucleic acid construct: The term “nucleic acid construct” as used herein refers to a nucleic acid molecule, either single- or double-stranded, which is isolated from a naturally occurring gene or which has been modified to contain segments of nucleic acids in a manner that would not otherwise exist in nature. The term nucleic acid construct is synonymous with the term “expression cassette” when the nucleic acid construct contains the control sequences required for expression of a coding sequence of the present invention. Control sequence: The term “control sequences” is defined herein to include all components, which are necessary or advantageous for the expression of a biologically active substance of the present invention. Each control sequence may be native or foreign to the polynucleotide encoding the substance. Such control sequences include, but are not limited to, a leader, propeptide sequence, promoter, signal peptide sequence, and transcription terminator. At a minimum, the control sequences include a promoter, and transcriptional and translational stop signals. The control sequences may be provided with linkers for the purpose of introducing specific restriction sites facilitating ligation of the control sequences with the coding region of the polynucleotide encoding a biologically active substance. Operably linked: The term “operably linked” as used herein refers to a configuration in which a control sequence is placed at an appropriate position relative to the coding sequence of the DNA sequence, such that the control sequence directs the expression of a biologically active substance. Coding sequence: When used herein the term “coding sequence” is intended to cover a nucleotide sequence, which directly specifies the amino acid sequence of its protein product. The boundaries of the coding sequence are generally determined by an open reading frame, which usually begins with the ATG start codon or alternative start codons such as GTG and TTG. Expression: The term “expression” includes any step involved in the production of a biologically active substance including, but not limited to, transcription, post-transcriptional modification, translation, post-translational modification, and secretion. Expression vector: The term “expression vector” herein covers a DNA molecule, linear or circular, that comprises a segment encoding a biologically active substance of the invention, and which is operably linked to additional segments that provide for its transcription. Host cell: The term “host cell”, as used herein, includes any cell type which is susceptible to transformation, transfection, conjugation, electroporation, etc. with a nucleic acid construct, plasmid, or vector. DETAILED DESCRIPTION OF THE INVENTION Bacillus licheniformis Chromosome and Features (Genes) Thereof The present invention relates to an isolated polynucleotide of the complete chromosomal DNA molecule of Bacillus licheniformis ATCC 14580 having the nucleotide sequence of SEQ ID NO: 1. Bacillus licheniformis ATCC 14580, consists of a circular molecule of 4,222,336 base pairs with a mean G+C content of 46.2%. The chromosome contains 4208 predicted protein-coding genes (SEQ ID NOs: 2-4198) with an average size of 873 bp, 7 rRNA operons, and 72 tRNA genes. The deduced amino acid sequences of the 4208 predicted protein-coding genes are shown in SEQ ID NOs: 4199-8395. SEQ ID NO: 4210 corresponds to SEQ ID NO: 2. SEQ ID NO: 4211 corresponds to SEQ ID NO: 3; SEQ ID NO: 4212 corresponds to SEQ ID NO: 4, etc. The predicted functions of the 4208 gene products are shown in Table 1. The Bacillus licheniformis chromosome possesses regions that are markedly co-linear with the chromosomes of Bacillus subtilis and Bacillus halodurans , and approximately 80% of the predicted genes have Bacillus subtilis orthologues. The present invention also relates to isolated features (genes) of the complete chromosomal DNA molecule of Bacillus licheniformis ATCC 14580 encoding biologically active substances, selected from the group consisting of: (a) a gene comprising a nucleotide sequence having at least 60% identity with any of the nucleotide sequences of SEQ ID NOs: 2-4198; and (b) a gene comprising a nucleotide sequence which hybridizes under at least medium stringency conditions with any of the genes of SEQ ID NOs: 2-4198, or a complementary strand thereof. In a first aspect, the present invention relates to isolated genes, which have a degree of identity to the nucleotide sequences of any of SEQ ID NOs: 2-4198 of at least about 60%, preferably at least about 65%, more preferably at least about 70%, more preferably at least about 75%, more preferably at least about 80%, more preferably at least about 85%, even more preferably at least about 90%, most preferably at least about 95%, and even most preferably at least about 97%, which encode biologically active substances having a particular biological activity (hereinafter “homologous biologically active substances”). In a second aspect, the present invention relates to isolated genes comprising nucleotide sequences which hybridize under very low stringency conditions, preferably low stringency conditions, more preferably medium stringency conditions, more preferably medium-high stringency conditions, even more preferably high stringency conditions, and most preferably very high stringency conditions with any of (i) the genes of SEQ ID NOs: 2-4198, or subsequences thereof, or (ii) complementary strands thereof (J. Sambrook, E. F. Fritsch, and T. Maniatus, 1989 , Molecular Cloning, A Laboratory Manual, 2d edition, Cold Spring Harbor, N.Y.). Subsequences of SEQ ID NOs: 2-4198 may be at least 100 nucleotides or preferably at least 200 nucleotides. Moreover, the subsequences may encode fragments of a gene product which have biological activity. The biologically active substances may also be biologically active allelic variants of the biologically active substances. The nucleotide sequences of SEQ ID NOs: 2-4198 or subsequences thereof, as well as the amino acid sequences of SEQ ID NOs: 4199-8395 or fragments thereof, may be used to design nucleic acid probes to identify and clone DNA encoding biologically active substances from strains of different genera or species according to methods well known in the art. In particular, such probes can be used for hybridization with the genomic DNA of the genus or species of interest, following standard Southern blotting procedures, in order to identify and isolate the corresponding gene therein. Such probes can be considerably shorter than the entire sequence, but should be at least 14, preferably at least 25, more preferably at least 35 nucleotides in length, such as at least 70 nucleotides in length. It is preferred, however, that the nucleic acid probes are at least 100 nucleotides in length. For example, the nucleic acid probes may be at least 200 nucleotides, at least 300 nucleotides, at least 400 nucleotides, or at least 500 nucleotides in length. Even longer probes may be used, e.g., nucleic acid probes which are at least 600 nucleotides, at least 700 nucleotides, at least 800 nucleotides, or at least 900 nucleotides in length. Both DNA and RNA probes can be used. The probes are typically labeled for detecting the corresponding gene (for example, with 32 P, 3 H, 35 S, biotin, or avidin). Such probes are encompassed by the present invention. A genomic DNA library prepared from such other organisms may, therefore, be screened for DNA which hybridizes with the probes described above and which encodes a biologically active substance. Genomic DNA from such other organisms may be separated by agarose or polyacrylamide gel electrophoresis, or other separation techniques. DNA from the libraries or the separated DNA may be transferred to and immobilized on nitrocellulose or other suitable carrier material. In order to identify a clone or DNA which is homologous with any of SEQ ID NOs: 2-4198 or subsequences thereof, the carrier material is used in a Southern blot. For purposes of the present invention, hybridization indicates that a polynucleotide hybridizes to a labeled gene having the nucleotide sequence shown in any of SEQ ID NOs: 2-4198, complementary strands thereof, or subsequences thereof, under very low to very high stringency conditions. Molecules to which the nucleic acid probe hybridizes under these conditions can be detected using X-ray film. In a preferred aspect, the nucleic acid probe is any of the genes of SEQ ID NOs: 2-4198, or subsequences thereof. In another preferred aspect, the nucleic acid probe is the mature coding region of any of the genes of SEQ ID NOs: 2-4198. In another preferred aspect, the nucleic acid probe is the gene of any of SEQ ID NOs: 2-4198 contained in Bacillus licheniformis ATCC 14580. In another preferred aspect, the nucleic acid probe is the mature coding region of any of the genes of SEQ ID NOs: 2-4198 contained in Bacillus licheniformis ATCC 14580. For long probes of at least 100 nucleotides in length, very low to very high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and either 25% formamide for very low and low stringencies, 35% formamide for medium and medium-high stringencies, or 50% formamide for high and very high stringencies, following standard Southern blotting procedures. For long probes of at least 100 nucleotides in length, the carrier material is finally washed three times each for 15 minutes using 2×SSC, 0.2% SDS preferably at least at 45° C. (very low stringency), more preferably at least at 50° C. (low stringency), more preferably at least at 55° C. (medium stringency), more preferably at least at 60° C. (medium-high stringency), even more preferably at least at 65° C. (high stringency), and most preferably at least at 70° C. (very high stringency). For short probes which are about 14 nucleotides to about 70 nucleotides in length, stringency conditions are defined as prehybridization, hybridization, and washing post-hybridization at about 5° C. to about 10° C. below the calculated T m using the calculation according to Bolton and McCarthy (1962 , Proceedings of the National Academy of Sciences USA 48:1390) in 0.9 M NaCl, 0.09 M Tris-HCl pH 7.6, 6 mM EDTA, 0.5% NP-40, 1× Denhardt's solution, 1 mM sodium pyrophosphate, 1 mM sodium monobasic phosphate, 0.1 mM ATP, and 0.2 mg of yeast RNA per ml following standard Southern blotting procedures. For short probes which are about 14 nucleotides to about 70 nucleotides in length, the carrier material is washed once in 6×SCC plus 0.1% SDS for 15 minutes and twice each for 15 minutes using 6×SSC at 5° C. to 10° C. below the calculated T m . Under salt-containing hybridization conditions, the effective T m is what controls the degree of identity required between the probe and the filter bound DNA for successful hybridization. The effective T m may be determined using the formula below to determine the degree of identity required for two DNAs to hybridize under various stringency conditions. Effective T m =81.5+16.6(log M [Na + ])+0.41(% G+C )−0.72(% formamide) The % G+C content of any of the genes of SEQ ID NOs: 2-4198 can easily be determined. For medium stringency, for example, the concentration of formamide is 35% and the Na + concentration for 5×SSPE is 0.75 M. Applying this formula to these values, the Effective T m in ° C. can be calculated. Another relevant relationship is that a 1% mismatch of two DNAs lowers the T m 1.40° C. To determine the degree of identity required for two DNAs to hybridize under medium stringency conditions at 42° C., the following formula is used: % Homology=100−[(Effective T m −Hybridization Temperature)/1.4] Applying this formula, the degree of identity required for two DNAs to hybridize under medium stringency conditions at 42° C. can be calculated. Similar calculations can be made under other stringency conditions, as defined herein. The present invention also relates to isolated polynucleotides obtained by (a) hybridizing a population of DNA under very low, low, medium, medium-high, high, or very high stringency conditions with any of (i) the genes of SEQ ID NOs: 2-4198, or subsequences thereof, or (ii) complementary strands thereof; and (b) isolating the hybridizing polynucleotide from the population of DNA. In a preferred aspect, the hybridizing polynucleotide encodes a polypeptide of any of SEQ ID NOs: 2-4198, or homologous polypeptides thereof. In a third aspect, the present invention relates to isolated polypeptides having amino acid sequences which have a degree of identity to any of SEQ ID NOs: 4199-8395 of at least about 60%, preferably at least about 65%, more preferably at least about 70%, more preferably at least about 75%, more preferably at least about 80%, more preferably at least about 85%, even more preferably at least about 90%, most preferably at least about 95%, and even most preferably at least about 97%, which have biological activity (hereinafter “homologous polypeptides”). In a preferred aspect, the homologous polypeptides have an amino acid sequence which differs by ten amino acids, preferably by five amino acids, more preferably by four amino acids, even more preferably by three amino acids, most preferably by two amino acids, and even most preferably by one amino acid from the amino acid sequences of SEQ ID NOs: 4199-8395. The polypeptides of the present invention preferably comprise the amino acid sequence of any of SEQ ID NOs: 4199-8395 or an allelic variant thereof; or a fragment thereof that has biological activity. In a more preferred aspect, the polypeptides of the present invention comprise the amino acid sequence of any of SEQ ID NOs: 4199-8395. In another preferred aspect, the polypeptides of the present invention comprise the mature polypeptide region of any of SEQ ID NOs: 4199-8395, or an allelic variant thereof; or a fragment thereof that has biological activity. In another preferred aspect, the polypeptides of the present invention comprise the mature polypeptide region of any of SEQ ID NOs: 4199-8395. In another preferred aspect, the polypeptides of the present invention consist of the amino acid sequence of any of SEQ ID NOs: 4199-8395 or an allelic variant thereof; or a fragment thereof that has biological activity. In another preferred aspect, the polypeptides of the present invention consist of the amino acid sequence of any of SEQ ID NOs: 4199-8395. In another preferred aspect, the polypeptides consist of the mature polypeptide region of any of SEQ ID NOs: 4199-8395 or an allelic variant thereof; or a fragment thereof that has biological activity. In another preferred aspect, the polypeptides consist of the mature polypeptide region of any of SEQ ID NOs: 4199-8395. In a fourth aspect, the present invention relates to isolated substances having biological activity which are encoded by polynucleotides which hybridize, as described above, under very low stringency conditions, preferably low stringency conditions, more preferably medium stringency conditions, more preferably medium-high stringency conditions, even more preferably high stringency conditions, and most preferably very high stringency conditions with which hybridize under very low stringency conditions, preferably low stringency conditions, more preferably medium stringency conditions, more preferably medium-high stringency conditions, even more preferably high stringency conditions, and most preferably very high stringency conditions with any of (i) the genes of SEQ ID NOs: 2-4198, or subsequences thereof, or (ii) complementary strands thereof. A subsequence of any of SEQ ID NOs: 2-4198 may be at least 100 nucleotides or preferably at least 200 nucleotides. Moreover, the subsequence may encode a fragment, e.g., a polypeptide fragment, which has biological activity. Nucleic Acid Constructs The present invention also relates to nucleic acid constructs comprising an isolated gene or isolated genes (e.g., operon) of the present invention operably linked to one or more control sequences which direct the expression of the coding sequence in a suitable host cell under conditions compatible with the control sequences. An isolated gene(s) of the present invention may be manipulated in a variety of ways to provide for production of a biologically active substance encoded directly or indirectly by the gene(s). Manipulation of the nucleotide sequence prior to its insertion into a vector may be desirable or necessary depending on the expression vector. The techniques for modifying nucleotide sequences utilizing recombinant DNA methods are well known in the art. The control sequence may be an appropriate promoter sequence, a nucleotide sequence which is recognized by a host cell for expression of the gene(s) encoding the biologically active substance. The promoter sequence contains transcriptional control sequences which mediate the expression of the biologically active substance. The promoter may be any nucleotide sequence which shows transcriptional activity in the host cell of choice including mutant, truncated, and hybrid promoters, and may be obtained from genes encoding extracellular or intracellular polypeptides or biologically active substances either homologous or heterologous to the host cell. Examples of suitable promoters for directing the transcription of the nucleic acid constructs of the present invention, especially in a bacterial host cell, are the promoters obtained from the E. coli lac operon, Streptomyces coelicolor agarase gene (dagA), Bacillus subtilis levansucrase gene (sacB), Bacillus licheniformis alpha-amylase qene (amyL), Bacillus stearothermophilus maltogenic amylase gene (amyM), Bacillus amyloliquefaciens alpha-amylase gene (amyQ), Bacillus licheniformis penicillinase gene (penP), Bacillus subtilis xylA and xylB genes, and prokaryotic beta-lactamase gene (Villa-Kamaroff et al., 1978 , Proceedings of the National Academy of Sciences USA 75: 3727-3731), as well as the tac promoter (DeBoer et al., 1983 , Proceedings of the National Academy of Sciences USA 80: 21-25). Further promoters are described in “Useful proteins from recombinant bacteria” in Scientific American, 1980, 242: 74-94; and in Sambrook et al., 1989, supra. The control sequence may also be a suitable transcription terminator sequence, a sequence recognized by a host cell to terminate transcription. The terminator sequence is operably linked to the 3′ terminus of the gene encoding the biologically active substance. Any terminator which is functional in the host cell of choice may be used in the present invention. The control sequence may also be a signal peptide coding region that codes for an amino acid sequence linked to the amino terminus of a polypeptide and directs the encoded polypeptide into the cell's secretory pathway. The 5′ end of the coding sequence of the nucleotide sequence may inherently contain a signal peptide coding region naturally linked in translation reading frame with the segment of the coding region which encodes the secreted polypeptide. Alternatively, the 5′ end of the coding sequence may contain a signal peptide coding region which is foreign to the coding sequence. The foreign signal peptide coding region may be required where the coding sequence does not naturally contain a signal peptide coding region. Alternatively, the foreign signal peptide coding region may simply replace the natural signal peptide coding region in order to enhance secretion of the polypeptide. However, any signal peptide coding region which directs the expressed polypeptide into the secretory pathway of a host cell of choice may be used in the present invention. Effective signal peptide coding regions for bacterial host cells are the signal peptide coding regions obtained from the genes for Bacillus NCIB 11837 maltogenic amylase, Bacillus stearothermophilus alpha-amylase, Bacillus licheniformis subtilisin, Bacillus licheniformis beta-lactamase, Bacillus stearothermophilus neutral proteases (nprT, nprS, nprM), and Bacillus subtilis prsA. Further signal peptides are described by Simonen and Palva, 1993 , Microbiological Reviews 57: 109-137. The control sequence may also be a propeptide coding region that codes for an amino acid sequence positioned at the amino terminus of a polypeptide. The resultant polypeptide is known as a proenzyme or propolypeptide (or a zymogen in some cases). A propolypeptide is generally inactive and can be converted to a mature active polypeptide by catalytic or autocatalytic cleavage of the propeptide from the propolypeptide. The propeptide coding region may be obtained from the genes for Bacillus subtilis alkaline protease (aprE) and Bacillus subtilis neutral protease (nprT). Where both signal peptide and propeptide regions are present at the amino terminus of a polypeptide, the propeptide region is positioned next to the amino terminus of a polypeptide and the signal peptide region is positioned next to the amino terminus of the propeptide region. It may also be desirable to add regulatory sequences which allow the regulation of the expression of a biologically active substance relative to the growth of the host cell. Examples of regulatory systems are those which cause the expression of the gene to be turned on or off in response to a chemical or physical stimulus, including the presence of a regulatory compound. Regulatory systems in prokaryotic systems include the lac, tac, and trp operator systems. Other examples of regulatory sequences are those which allow for gene amplification. In eukaryotic systems, these include the dihydrofolate reductase gene which is amplified in the presence of methotrexate, and the metallothionein genes which are amplified with heavy metals. In these cases, the nucleotide sequence encoding the biologically active substance would be operably linked with the regulatory sequence. Expression Vectors The present invention also relates to recombinant expression vectors comprising an isolated gene of the present invention, a promoter, and transcriptional and translational stop signals. The various nucleic acid and control sequences described above may be joined together to produce a recombinant expression vector which may include one or more convenient restriction sites to allow for insertion or substitution of the nucleotide sequence encoding the polypeptide at such sites. Alternatively, a gene of the present invention may be expressed by inserting the nucleotide sequence or a nucleic acid construct comprising the sequence into an appropriate vector for expression. In creating the expression vector, the coding sequence is located in the vector so that the coding sequence is operably linked with the appropriate control sequences for expression. The recombinant expression vector may be any vector (e.g., a plasmid or virus) which can be conveniently subjected to recombinant DNA procedures and can bring about the expression of a gene of the present invention. The choice of the vector will typically depend on the compatibility of the vector with the host cell into which the vector is to be introduced. The vectors may be linear or closed circular plasmids. The vector may be an autonomously replicating vector, i.e., a vector which exists as an extrachromosomal entity, the replication of which is independent of chromosomal replication, e.g., a plasmid, an extrachromosomal element, a minichromosome, or an artificial chromosome. The vector may contain any means for assuring self-replication. Alternatively, the vector may be one which, when introduced into the host cell, is integrated into the genome and replicated together with the chromosome(s) into which it has been integrated. Furthermore, a single vector or plasmid or two or more vectors or plasmids which together contain the total DNA to be introduced into the genome of the host cell, or a transposon may be used. The vectors of the present invention preferably contain one or more selectable markers which permit easy selection of transformed cells. A selectable marker is a gene the product of which provides for biocide or viral resistance, resistance to heavy metals, prototrophy to auxotrophs, and the like. Examples of bacterial selectable markers are the dal genes from Bacillus subtilis or Bacillus licheniformis , or markers which confer antibiotic resistance such as ampicillin, kanamycin, chloramphenicol or tetracycline resistance. The vectors of the present invention preferably contain an element(s) that permits integration of the vector into the host cell's genome or autonomous replication of the vector in the cell independent of the genome. For integration into the host cell genome, the vector may rely on portions of the sequence of the gene or any other element of the vector for integration of the vector into the genome by homologous or nonhomologous recombination. Alternatively, the vector may contain additional nucleotide sequences for directing integration by homologous recombination into the genome of the host cell. The additional nucleotide sequences enable the vector to be integrated into the host cell genome at a precise location(s) in the chromosome(s). To increase the likelihood of integration at a precise location, the integrational elements should preferably contain a sufficient number of nucleotides, such as 100 to 10,000 base pairs, preferably 400 to 10,000 base pairs, and most preferably 800 to 10,000 base pairs, which are highly homologous with the corresponding target sequence to enhance the probability of homologous recombination. The integrational elements may be any sequence that is homologous with the target sequence in the genome of the host cell. Furthermore, the integrational elements may be non-encoding or encoding nucleotide sequences. On the other hand, the vector may be integrated into the genome of the host cell by non-homologous recombination. For autonomous replication, the vector may further comprise an origin of replication enabling the vector to replicate autonomously in the host cell in question. The origin of replication may be any plasmid replicator mediating autonomous replication which functions in a cell. The term “origin of replication” or “plasmid replicator” is defined herein as a sequence that enables a plasmid or vector to replicate in vivo. Examples of bacterial origins of replication are the origins of replication of plasmids pBR322, pUC19, pACYC177, and pACYC184 permitting replication in E. coli , and pUB110, pE194, pTA1060, and pAMβ1 permitting replication in Bacillus. More than one copy of a gene of the present invention may be inserted into the host cell to increase production of the gene product. An increase in the copy number of the gene can be obtained by integrating at least one additional copy of the sequence into the host cell genome or by including an amplifiable selectable marker gene with a gene of the present invention where cells containing amplified copies of the selectable marker gene, and thereby additional copies of the gene of the present invention, can be selected for by cultivating the cells in the presence of the appropriate selectable agent. The procedures used to ligate the elements described above to construct the recombinant expression vectors of the present invention are well known to one skilled in the art (see, e.g., Sambrook et al., 1989, supra). Host Cells The present invention also relates to recombinant host cells, comprising an isolated gene of the present invention, where the host cells are advantageously used in the recombinant production of a biologically active substance encoded by the gene. A vector comprising a gene of the present invention is introduced into a host cell so that the vector is maintained as a chromosomal integrant or as a self-replicating extra-chromosomal vector as described earlier. The term “host cell” encompasses any progeny of a parent cell that is not identical to the parent cell due to mutations that occur during replication. The choice of a host cell will to a large extent depend upon the gene encoding the biologically active substance and its source. The host cell may be any unicellular microorganism, e.g., a prokaryote. Useful unicellular cells are bacterial cells such as gram positive bacteria including, but not limited to, a Bacillus cell, e.g., Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus brevis, Bacillus cereus, Bacillus circulans, Bacillus clausii, Bacillus coagulans, Bacillus fastidiosus, Bacillus firmus, Bacillus lautus, Bacillus lentus, Bacillus licheniformis, Bacillus macerans, Bacillus megaterium, Bacillus methanolicus, Bacillus pumilus, Bacillus sphaericus, Bacillus stearothermophilus, Bacillus subtilis , and Bacillus thuringiensis ; or a Streptomyces cell, e.g., Streptomyces lividans and Streptomyces murinus , or gram negative bacteria such as E. coli and Pseudomonas sp. In a preferred aspect, the bacterial host cell is a Bacillus lentus, Bacillus licheniformis, Bacillus stearothermophilus , or Bacillus subtilis cell. In another preferred aspect, the Bacillus cell is an alkalophilic Bacillus. The introduction of a vector into a bacterial host cell may, for instance, be effected by protoplast transformation (see, e.g., Chang and Cohen, 1979 , Molecular General Genetics 168: 111-115), using competent cells (see, e.g., Young and Spizizen, 1961 , Journal of Bacteriology 81: 823-829, or Dubnau and Davidoff-Abelson, 1971 , Journal of Molecular Biology 56: 209-221), electroporation (see, e.g., Shigekawa and Dower, 1988 , Biotechniques 6: 742-751), or conjugation (see, e.g., Koehler and Thorne, 1987 , Journal of Bacteriology 169: 5771-5278). Methods of Production The present invention also relates to methods for producing a biologically active substance of the present invention comprising (a) cultivating a strain, which in its wild-type form is capable of producing the biologically active substance, under conditions conducive for production of the biologically active substance; and (b) recovering the biologically active substance. Preferably, the strain is of the genus Bacillus , and more preferably Bacillus licheniformis. The present invention also relates to methods for producing a biologically active substance of the present invention comprising (a) cultivating a host cell under conditions conducive for production of the biologically active substance; and (b) recovering the biologically active substance. The present invention also relates to methods for producing a biologically active substance of the present invention comprising (a) cultivating a host cell under conditions conducive for production of the biologically active substance, wherein the host cell comprises a mutant polynucleotide comprising at least one mutation in the coding region of any of SEQ ID NOs: 2-4198, wherein the mutant polynucleotide encodes a biologically active substance which consists of SEQ ID NOs: 4199-8395, respectively, and (b) recovering the biologically active substance. In the production methods of the present invention, the cells are cultivated in a nutrient medium suitable for production of the biologically active substance using methods known in the art. For example, the cell may be cultivated by shake flask cultivation, and small-scale or large-scale fermentation (including continuous, batch, fed-batch, or solid state fermentations) in laboratory or industrial fermentors performed in a suitable medium and under conditions allowing the biologically active substance to be expressed and/or isolated. The cultivation takes place in a suitable nutrient medium comprising carbon and nitrogen sources and inorganic salts, using procedures known in the art. Suitable media are available from commercial suppliers or may be prepared according to published compositions (e.g., in catalogues of the American Type Culture Collection). If the biologically active substance is secreted into the nutrient medium, the biologically active substance can be recovered directly from the medium. If the biologically active substance is not secreted, it can be recovered from cell lysates. The biologically active substances may be detected using methods known in the art that are specific for the polypeptides. These detection methods may include use of specific antibodies, formation of an enzyme product, or disappearance of an enzyme substrate. For example, an enzyme assay may be used to determine the activity of an enzyme. The resulting biologically active substances may be recovered by methods known in the art. For example, the biologically active substances may be recovered from the nutrient medium by conventional procedures including, but not limited to, centrifugation, filtration, extraction, spray-drying, evaporation, or precipitation. The biologically active substances of the present invention may be purified by a variety of procedures known in the art including, but not limited to, chromatography (e.g., ion exchange, affinity, hydrophobic, chromatofocusing, and size exclusion), electrophoretic procedures (e.g., preparative isoelectric focusing), differential solubility (e.g., ammonium sulfate precipitation), SDS-PAGE, or extraction (see, e.g., Protein Purification , J.-C. Janson and Lars Ryden, editors, VCH Publishers, New York, 1989). Plants The present invention also relates to a transgenic plant, plant part, or plant cell which has been transformed with a gene encoding a biologically active substance of the present invention so as to express and produce the biologically active substance in recoverable quantities. The biologically active substance may be recovered from the plant or plant part. Alternatively, the plant or plant part containing the recombinant biologically active substance may be used as such for improving the quality of a food or feed, e.g., improving nutritional value, palatability, and rheological properties, or to destroy an antinutritive factor. The transgenic plant can be dicotyledonous (a dicot) or monocotyledonous (a monocot). Examples of monocot plants are grasses, such as meadow grass (blue grass, Poa ), forage grass such as festuca, lolium , temperate grass, such as Agrostis , and cereals, e.g., wheat, oats, rye, barley, rice, sorghum, and maize (corn). Examples of dicot plants are tobacco, legumes, such as lupins, potato, sugar beet, pea, bean and soybean, and cruciferous plants (family Brassicaceae), such as cauliflower, rape seed, and the closely related model organism Arabidopsis thaliana. Examples of plant parts are stem, callus, leaves, root, fruits, seeds, and tubers as well as the individual tissues comprising these parts, e.g., epidermis, mesophyll, parenchyme, vascular tissues, meristems. In the present context, also specific plant cell compartments, such as chloroplast, apoplast, mitochondria, vacuole, peroxisomes and cytoplasm are considered to be a plant part. Furthermore, any plant cell, whatever the tissue origin, is considered to be a plant part. Likewise, plant parts such as specific tissues and cells isolated to facilitate the utilisation of the invention are also considered plant parts e.g. embryos, endosperms, aleurone and seeds coats. Also included within the scope of the present invention are the progeny of such plants, plant parts, and plant cells. The transgenic plant or plant cell expressing a biologically active substance of the present invention may be constructed in accordance with methods known in the art. Briefly, the plant or plant cell is constructed by incorporating one or more expression constructs encoding a biologically active substance of the present invention into the plant host genome and propagating the resulting modified plant or plant cell into a transgenic plant or plant cell. The expression construct is conveniently a nucleic acid construct which comprises a gene encoding a biologically active substance of the present invention operably linked with appropriate regulatory sequences required for expression of the nucleotide sequence in the plant or plant part of choice. Furthermore, the expression construct may comprise a selectable marker useful for identifying host cells into which the expression construct has been integrated and DNA sequences necessary for introduction of the construct into the plant in question (the latter depends on the DNA introduction method to be used). The choice of regulatory sequences, such as promoter and terminator sequences and optionally signal or transit sequences is determined, for example, on the basis of when, where, and how the biologically active substance is desired to be expressed. For instance, the expression of the gene encoding a biologically active substance of the present invention may be constitutive or inducible, or may be developmental, stage or tissue specific, and the gene product may be targeted to a specific tissue or plant part such as seeds or leaves. Regulatory sequences are, for example, described by Tague et al., 1988 , Plant Physiology 86: 506. For constitutive expression the 35S-CaMV, the maize ubiquitin 1 and the rice actin 1 promoter may be used (Franck et al., 1980 . Cell 21: 285-294, Christensen A H, Sharrock R A and Quail, 1992 , Plant Mo. Biol. 18: 675-689.; Zhang W, McElroy D. and Wu R., 1991 , Plant Cell 3: 1155-1165). Organ-specific promoters may be, for example, a promoter from storage sink tissues such as seeds, potato tubers, and fruits (Edwards and Coruzzi, 1990 , Ann. Rev. Genet. 24: 275-303), or from metabolic sink tissues such as meristems (Ito et al., 1994 , Plant Mol. Biol. 24: 863-878), a seed specific promoter such as the glutelin, prolamin, globulin, or albumin promoter from rice (Wu et al., 1998 , Plant and Cell Physiology 39: 885-889), a Vicia faba promoter from the legumin B4 and the unknown seed protein gene from Vicia faba (Conrad et al., 1998 , Journal of Plant Physiology 152: 708-711), a promoter from a seed oil body protein (Chen et al., 1998, Plant and Cell Physiology 39: 935-941), the storage protein napA promoter from Brassica napus , or any other seed specific promoter known in the art, e.g., as described in WO 91/14772. Furthermore, the promoter may be a leaf specific promoter such as the rbcs promoter from rice or tomato (Kyozuka et al., 1993 , Plant Physiology 102: 991-1000, the chlorella virus adenine methyltransferase gene promoter (Mitra and Higgins, 1994 , Plant Molecular Biology 26: 85-93), or the aldP gene promoter from rice (Kagaya et al., 1995 , Molecular and General Genetics 248: 668-674), or a wound inducible promoter such as the potato pin2 promoter (Xu et al., 1993 , Plant Molecular Biology 22: 573-588). Likewise, the promoter may inducible by abiotic treatments such as temperature, drought or alterations in salinity or induced by exogenously applied substances that activate the promoter, e.g., ethanol, oestrogens, plant hormones like ethylene, abscisic acid and gibberellic acid and heavy metals. A promoter enhancer element may also be used to achieve higher expression of the enzyme in the plant. For instance, the promoter enhancer element may be an intron which is placed between the promoter and the nucleotide sequence encoding a biologically active substance of the present invention. For instance, Xu et al., 1993, supra disclose the use of the first intron of the rice actin 1 gene to enhance expression. The selectable marker gene and any other parts of the expression construct may be chosen from those available in the art. The nucleic acid construct is incorporated into the plant genome according to conventional techniques known in the art, including Agrobacterium -mediated transformation, virus-mediated transformation, microinjection, particle bombardment, biolistic transformation, and electroporation (Gasser et al, 1990 , Science 244: 1293; Potrykus, 1990 , Bio/Technology 8: 535; Shimamoto et al., 1989 , Nature 338: 274). Presently, Agrobacterium tumefaciens -mediated gene transfer is the method of choice for generating transgenic dicots (for a review, see Hooykas and Schilperoort, 1992 , Plant Molecular Biology 19: 15-38). However it can also be used for transforming monocots, although other transformation methods are generally preferred for these plants. Presently, the method of choice for generating transgenic monocots is particle bombardment (microscopic gold or tungsten particles coated with the transforming DNA) of embryonic calli or developing embryos (Christou, 1992 , Plant Journal 2: 275-281; Shimamoto, 1994 , Current Opinion Biotechnology 5: 158-162; Vasil et al., 1992 , Bio/Technology 10: 667-674). An alternative method for transformation of monocots is based on protoplast transformation as described by Omirulleh et al., 1993 , Plant Molecular Biology 21: 415-428. Following transformation, the transformants having incorporated therein the expression construct are selected and regenerated into whole plants according to methods well-known in the art. Often the transformation procedure is designed for the selective elimination of selection genes either during regeneration or in the following generations by using, for example, co-transformation with two separate T-DNA constructs or site specific excision of the selection gene by a specific recombinase. The present invention also relates to methods for producing a biologically active substance of the present invention comprising (a) cultivating a transgenic plant or a plant cell comprising a gene encoding a biologically active substance of the present invention under conditions conducive for production of the biologically active substance; and (b) recovering the biologically active substance. Removal or Reduction of Biologically Active Substance The present invention also relates to methods for producing a mutant of a parent cell, which comprises disrupting or deleting all or a portion of a gene encoding a biologically active substance of the present invention, which results in the mutant cell producing less of the biologically active substance than the parent cell when cultivated under the same conditions. The mutant cell may be constructed by reducing or eliminating expression of a gene encoding or regulatory synthesis of a biologically active substance of the present invention using methods well known in the art, for example, insertions, disruptions, replacements, or deletions. The gene to be modified or inactivated may be, for example, the coding region or a part thereof essential for activity, or a regulatory element of the gene required for the expression of the coding region. An example of such a regulatory or control sequence may be a promoter sequence or a functional part thereof, i.e., a part that is sufficient for affecting expression of the gene. Other control sequences for possible modification include, but are not limited to, a leader, propeptide sequence, signal peptide sequence, transcription terminator, and transcriptional activator. Modification or inactivation of the gene may be performed by subjecting the parent cell to mutagenesis and selecting for mutant cells in which expression of the gene has been reduced or eliminated. The mutagenesis, which may be specific or random, may be performed, for example, by use of a suitable physical or chemical mutagenizing agent, by use of a suitable oligonucleotide, or by subjecting the DNA sequence to PCR generated mutagenesis. Furthermore, the mutagenesis may be performed by use of any combination of these mutagenizing agents. Examples of a physical or chemical mutagenizing agent suitable for the present purpose include ultraviolet (UV) irradiation, hydroxylamine, N-methyl-N′-nitro-N-nitrosoguanidine (MNNG), O-methyl hydroxylamine, nitrous acid, ethyl methane sulphonate (EMS), sodium bisulphite, formic acid, and nucleotide analogues. When such agents are used, the mutagenesis is typically performed by incubating the parent cell to be mutagenized in the presence of the mutagenizing agent of choice under suitable conditions, and screening and/or selecting for mutant cells exhibiting reduced or no expression of the gene. Modification or inactivation of the nucleotide sequence may be accomplished by introduction, substitution, or removal of one or more nucleotides in the gene or a regulatory element required for the transcription or translation thereof. For example, nucleotides may be inserted or removed so as to result in the introduction of a stop codon, the removal of the start codon, or a change in the open reading frame. Such modification or inactivation may be accomplished by site-directed mutagenesis or PCR generated mutagenesis in accordance with methods known in the art. Although, in principle, the modification may be performed in vivo, i.e., directly on the cell expressing the nucleotide sequence to be modified, it is preferred that the modification be performed in vitro as exemplified below. An example of a convenient way to eliminate or reduce expression of a nucleotide sequence by a cell of choice is based on techniques of gene replacement, gene deletion, or gene disruption. For example, in the gene disruption method, a nucleic acid sequence corresponding to the endogenous nucleotide sequence is mutagenized in vitro to produce a defective nucleic acid sequence which is then transformed into the parent cell to produce a defective gene. By homologous recombination, the defective nucleic acid sequence replaces the endogenous nucleotide sequence. It may be desirable that the defective nucleotide sequence also encodes a marker that may be used for selection of transformants in which the nucleotide sequence has been modified or destroyed. In a particularly preferred aspect, the nucleotide sequence is disrupted with a selectable marker such as those described herein. Alternatively, modification or inactivation of the nucleotide sequence may be performed by established anti-sense techniques using a sequence complementary to the nucleotide sequence. More specifically, expression of the nucleotide sequence by a cell may be reduced or eliminated by introducing a sequence complementary to the nucleic acid sequence of the gene that may be transcribed in the cell and is capable of hybridizing to the mRNA produced in the cell. Under conditions allowing the complementary anti-sense nucleotide sequence to hybridize to the mRNA, the amount of protein translated is thus reduced or eliminated. The present invention further relates to a mutant cell of a parent cell which comprises a disruption or deletion of a nucleotide sequence encoding the biologically active substance or a control sequence thereof, which results in the mutant cell producing less of the biologically active substance than the parent cell. The biologically active substance-deficient mutant cells so created are particularly useful as host cells for the expression of homologous and/or heterologous substances, such as polypeptides. Therefore, the present invention further relates to methods for producing a homologous or heterologous substance comprising (a) cultivating the mutant cell under conditions conducive for production of the substance; and (b) recovering the substance. The term “heterologous substances” is defined herein as substances which are not native to the host cell, a native substance in which modifications have been made to alter the native sequence, or a native substance whose expression is quantitatively altered as a result of a manipulation of the host cell by recombinant DNA techniques. In a further aspect, the present invention relates to a method for producing a protein product essentially free of a biologically active substance by fermentation of a cell which produces both a biologically active substance of the present invention as well as the protein product of interest by adding an effective amount of an agent capable of inhibiting activity of the biologically active substance to the fermentation broth before, during, or after the fermentation has been completed, recovering the product of interest from the fermentation broth, and optionally subjecting the recovered product to further purification. In accordance with this aspect of the invention, it is possible to remove at least 60%, preferably at least 75%, more preferably at least 85%, still more preferably at least 95%, and most preferably at least 99% of the biologically active substance. Complete removal of biologically active substance may be obtained by use of this method. The methods used for cultivation and purification of the product of interest may be performed by methods known in the art. The methods of the present invention for producing an essentially biologically active substance-free product is of particular interest in the production of prokaryotic polypeptides, in particular bacterial proteins such as enzymes. The enzyme may be selected from, e.g., an amylolytic enzyme, lipolytic enzyme, proteolytic enzyme, cellulytic enzyme, oxidoreductase, or plant cell-wall degrading enzyme. Examples of such enzymes include an aminopeptidase, amylase, amyloglucosidase, carbohydrase, carboxypeptidase, catalase, cellulase, chitinase, cutinase, cyclodextrin glycosyltransferase, deoxyribonuclease, esterase, galactosidase, beta-galactosidase, glucoamylase, glucose oxidase, glucosidase, haloperoxidase, hemicellulase, invertase, isomerase, laccase, ligase, lipase, lyase, mannosidase, oxidase, pectinolytic enzyme, peroxidase, phytase, phenoloxidase, polyphenoloxidase, proteolytic enzyme, ribonuclease, transferase, transglutaminase, or xylanase. The biologically active substance-deficient cells may also be used to express heterologous proteins of pharmaceutical interest such as hormones, growth factors, receptors, and the like. It will be understood that the term “prokaryotic polypeptides” includes not only native polypeptides, but also those polypeptides, e.g., enzymes, which have been modified by amino acid substitutions, deletions or additions, or other such modifications to enhance activity, thermostability, pH tolerance and the like. In a further aspect, the present invention relates to a product of a protein or substance essentially free of a biologically active substance of the invention, produced by a method of the present invention. Compositions The present invention also relates to compositions comprising a biologically active substance of the present invention. Preferably, the compositions are enriched in the biologically active substance. The term “enriched” indicates that the biologically active substance of the composition has been increased, e.g., with an enrichment factor of 1.1. The composition may comprise a biologically active substance of the invention as the major component, e.g., a mono-component composition. Alternatively, the composition may comprise multiple biologically active substances, for example, multiple enzymes, such as an aminopeptidase, amylase, carbohydrase, carboxypeptidase, catalase, cellulase, chitinase, cutinase, cyclodextrin glycosyltransferase, deoxyribonuclease, esterase, alpha-galactosidase, beta-galactosidase, glucoamylase, alpha-glucosidase, beta-glucosidase, haloperoxidase, invertase, laccase, lipase, mannosidase, oxidase, pectinolytic enzyme, peptidoglutaminase, peroxidase, phytase, polyphenoloxidase, proteolytic enzyme, ribonuclease, transglutaminase, or xylanase. The compositions may be prepared in accordance with methods known in the art and may be in the form of a liquid or a dry composition. For instance, the composition may be in the form of a granulate or a microgranulate. The biologically active substance to be included in the composition may be stabilized in accordance with methods known in the art. Methods for Using the Bacillus licheniformis Chromosome The present invention also relates to methods for using the Bacillus licheniformis chromosome. The chromosome of Bacillus licheniformis serves as a reservoir of new genes/proteins that have likely environmental, energy, health, and industrial applications (e.g., enzymes, antibiotics, biochemicals). A clear extension of this is that the newly discovered molecules can be used as starting points for further improvements via well-established gene shuffling, directed evolution, and protein engineering methods. Additionally, regions or motifs (e.g., signal peptides, active sites, substrate-binding regions) from the newly discovered molecules may be employed to derive novel chimeras with industrially advantageous properties. The genes encoded in the chromosome may be used for monitoring global gene expression during the life cycle of the organism or during industrial fermentations (e.g., implemented on DNA microarrays). By monitoring global gene expression, for example, improved processes for industrial fermentation can be implemented with greater efficiency and economy. The chromosome is useful in comparative evolutionary and ecological studies. For example, dozens of Bacillus licheniformis isolates can be readily compared on a global scale by hybridization of their genomic DNAs to a microarray fabricated from the reference strain presented in this case (so-called comparative genomic hybridization). Using this method, one can compare various isolates to look for similarities/differences among geographical and environmental niches or among biocontrol strains versus saprophytic isolates. The chromosome sequence may be used to construct the metabolic blueprint for Bacillus licheniformis that includes all catabolic and anabolic pathways, signaling pathways, regulatory networks, growth substrates, biochemical intermediates, end products, electron donors/acceptors and others. In doing so, it is possible to modify the metabolic machinery of the organism by deleting unwanted pathways and/or adding enzymes/pathways from other organisms to generate useful chemicals and intermediates. The pathways and components that contribute to production of extracellular and surface proteins in Bacillus licheniformis can be extracted from the chromosomal sequence. This affords opportunities for improved production of extracellular proteins by genetic manipulation of the secretion machinery. The chromosome data allows deduction of the essential genes for Bacillus licheniformis (either by comparison to related bacteria such as Bacillus subtilis or by systematic gene-by-gene knock outs). Thus it has become possible to design custom-made strains which contain only the genes that are essential for production of specific proteins or metabolites (so-called cell factory concept). The chromosome data may be used to construct interspecies hybrids between Bacillus licheniformis and other bacteria. Venter et al., 2003 , Proc. Nat. Acad. Sci. USA 100, 15440-15445 have shown that it is possible to construct an entire virus genome from smaller DNA segments. Thus, segments of the Bacillus licheniformis chromosome may be employed to derive novel chromosomal segments or even entire chimeric chromosomes for specific applications. In a preferred aspect, methods for using the Bacillus licheniformis chromosome include host improvement, e.g., secretion of a protein or metabolite, genome shuffling, construction of new genomes, metabolic engineering and pathway reconstruction, carrier for heterologous expression vectors, microarrays as described herein, identification of polypeptides in proteomics analyses, and comparative genomics with other Bacillus species or related organisms. Methods for Isolating Genes The present invention also relates to methods for isolating a gene encoding a biologically active substance from a microbial strain. The method comprises first the addition of a mixture of first labeled nucleic acid probes, isolated from a microbial strain cultured on medium without an inducing substrate, and a mixture of second labeled nucleic acid probes, isolated from the microbial strain cultured on medium with the inducing substrate, to an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198, under conditions where the labeled nucleic acid probes hybridize to complementary sequences of the Bacillus licheniformis genes on the array. The first nucleic acid probes are labeled with a first reporter and the second nucleic acid probes are labeled with a second reporter. The array is then examined under conditions wherein the relative expression of the genes of the microbial strain is determined by the observed hybridization reporter signal of each spot on the array in which (i) the Bacillus licheniformis genes on the array that hybridize to the first nucleic acid probes produce a distinct first hybridization reporter signal or to the second nucleic acid probes produce a distinct second hybridization reporter signal, and (ii) the Bacillus licheniformis genes on the array that hybridize to both the first and second nucleic acid probes produce a distinct combined hybridization reporter signal. The probe is then sequenced to isolate from the microbial strain the corresponding gene that encodes an enzyme that degrades or converts the substrate. Enzymes. The gene of interest may encode any enzyme including an oxidoreductase, transferase, hydrolase, lyase, isomerase, or ligase. In a preferred aspect, the enzyme is an acylase, alpha-glucosidase, amidase, aminopeptidase, amylase, carbohydrase, carboxypeptidase, catalase, cellulase, chitinase, cutinase, cyclodextrin glycosyltransferase, deoxyribonuclease, dextrinase, endoglucanase, esterase, galactanase, alpha-galactosidase, beta-galactosidase, glucoamylase, glucanase, glucocerebrosidase, alpha-glucosidase, beta-glucosidase, hemicellulase, invertase, laccase, lignase, lipase, lysin, mannosidase, mutanase, oxidase, pectinolytic enzyme, peroxidase, phosphatase, phospholipase, phytase, polyphenoloxidase, proteolytic enzyme, pullulanase, ribonuclease, transglutaminase, urokinase, or xylanase. Inducing Substrate. The inducing substrate may be any substrate that is subject to the action of an enzyme, i.e., that degrades or converts the substrate. In a preferred aspect, the inducing substrate is lignin or a lignin-containing material. In a more preferred aspect, the lignin-containing material is lignocellulose. In another preferred aspect, the inducing substrate is cellulose. In another preferred aspect, the inducing substrate is hemicellulose. In another preferred aspect, the inducing substrate is pectin. In another preferred aspect, the inducing substrate is a lipid. In another preferred aspect, the inducing substrate is phospholipid. In another preferred aspect, the inducing substrate is phytic acid. In another preferred aspect, the inducing substrate is protein. In another preferred aspect, the inducing substrate is a starch. In another preferred aspect, the inducing substrate is a medium that is low in nutrients such as amino acids, carbon, nitrogen, phosphate, or iron. In a more preferred aspect, the protein substrate is blood, casein, egg, gelatin, gluten, milk protein, or soy protein. In another more preferred aspect, the lignin-containing material is hardwood thermomechanical pulp. In another more preferred aspect, the lignocellulose is corn stover. In another more preferred aspect, the lignocellulose is white poplar. In another more preferred aspect, the lignocellulose is rice straw. In another more preferred aspect, the lignocellulose is switch grass. Microbial Strains. In the methods of the present invention, the microbial strain may be any microbial strain. The strain is cultured on a suitable nutrient medium with and without a substrate of interest. The strain cultured on medium without the substrate is used as a reference for identifying differences in expression of the same or similar complement of genes in the strain cultured on medium with substrate. The strain may be a wild-type, mutant, or recombinant strain. In the methods of the present invention, the microbial strain is preferably a bacterium. In a more preferred aspect, the bacterium is a Bacillus, Pseudomonas , or Streptomyces strain or E. coli. The Bacillus strain may be any Bacillus strain. In a preferred aspect, the Bacillus strain is Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus brevis, Bacillus cereus, Bacillus circulans, Bacillus clausii, Bacillus coagulans, Bacillus fastidiosus, Bacillus firmus, Bacillus lautus, Bacillus lentus, Bacillus licheniformis, Bacillus macerans, Bacillus megaterium, Bacillus methanolicus, Bacillus pumilus, Bacillus sphaericus, Bacillus stearothermophilus, Bacillus subtilis , or Bacillus thuringiensis . It will be understood that the term “ Bacillus ” also encompasses relatives of Bacillus such as Paenibacillus, Oceanobacillus , and the like. The Pseudomonas strain may be any Pseudomonas strain. In a preferred aspect, the Pseudomonas strain is Pseudomonas acidovorans, Pseudomonas aeruginosa, Pseudomonas alcaligenes, Pseudomonas anguilliseptica, Pseudomonas abtimicrobica, Pseudomonas aurantiaca, Pseudomonas aureofaciens, Pseudomonas beijerinckii, Pseudomonas boreopolis, Pseudomonas chlororaphis, Pseudomonas citronellolis, Pseudomonas cocovenenans, Pseudomonas diminuta, Pseudomonas doudoroffii, Pseudomonas echinoides, Pseudomonas elongata, Pseudomonas fluorescens, Pseudomonas fragi, Pseudomonas halophobica, Pseudomonas huttiensis, Pseudomonas indigofera, Pseudomonas lanceolata, Pseudomonas lemoignei, Pseudomonas lundensis, Pseudomonas mendocina, Pseudomonas mephitica, Pseudomonas mucidolens, Pseudomonas oleovorans, Pseudomonas phenazinium, Pseudomonas pictorium, Pseudomonas putida, Pseudomonas resinovorans, Pseudomonas saccharophila, Pseudomonas stanieri, Pseudomonas stutzeri, Pseudomonas taetrolens , or Pseudomonas vesicularis. The Streptomyces strain may be any Streptomyces strain. In a preferred aspect, the Streptomyces strain is Streptomyces lividans . In another preferred aspect, the Streptomyces strain is Streptomyces murinus. Microarrays. The term “an array of Bacillus licheniformis genes” is defined herein as a linear or two-dimensional array of preferably discrete elements of an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198 (e.g., synthetic oligonucleotides of, for example, 40-60 nucleotides), wherein each discrete element has a finite area, formed on the surface of a solid support. It shall be understood that the term “ Bacillus licheniformis genes” encompasses nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198. The term “microarray” is defined herein as an array of Bacillus licheniformis gene elements having a density of discrete of Bacillus licheniformis gene elements of at least about 100/cm 2 , and preferably at least about 1000/cm 2 . The Bacillus licheniformis gene elements in a microarray have typical dimensions, e.g., diameters, in the range of between about 10 to about 250 μm, preferably in the range of between about 10 to about 200 μm, more preferably in the range of between about 20 to about 150 μm, even more preferably in the range of between about 20 to about 100 μm, most preferably in the range of between about 50 to about 100 μm, and even most preferably in the range of between about 80 to about 100 μm, and are separated from other gene elements in the microarray by about the same distance. Methods and instruments for forming microarrays on the surface of a solid support are well known in the art. See, for example, U.S. Pat. Nos. 5,807,522; 5,700,637; and 5,770,151. The instrument may be an automated device such as described in U.S. Pat. No. 5,807,522. The term “a substrate containing an array of Bacillus licheniformis genes” is defined herein as a solid support having deposited on the surface of the support one or more of a plurality of Bacillus licheniformis genes, as described herein, for use in detecting binding of labeled nucleic acids to the Bacillus licheniformis genes. The substrate may, in one aspect, be a glass support (e.g., glass slide) having a hydrophilic or hydrophobic coating on the surface of the support, and an array of distinct random nucleic acid fragments bound to the coating, where each distinct random nucleic acid fragment is disposed at a separate, defined position. Each microarray in the substrate preferably contains at least 10 3 distinct Bacillus licheniformis in a surface area of less than about 5 or 6 cm 2 . Each distinct Bacillus licheniformis gene (i) is disposed at a separate, defined position on the array, (ii) has a length of at least 50 bp, and (iii) is present in a defined amount between about 0.1 femtomoles and 100 nanomoles or higher if necessary. For a hydrophilic coating, the glass slide is coated by placing a film of a polycationic polymer with a uniform thickness on the surface of the slide and drying the film to form a dried coating. The amount of polycationic polymer added should be sufficient to form at least a monolayer of polymers on the glass surface. The polymer film is bound to the surface via electrostatic binding between negative silyl-OH groups on the surface and charged cationic groups in the polymers. Such polycationic polymers include, but are not limited to, polylysine and polyarginine. Another coating strategy employs reactive aldehydes to couple DNA to the slides (Schena et al., 1996 , Proceedings of the National Academy of Science USA 93: 10614-10619; Heller at al., 1997 , Proceedings of the National Academy of Science USA 94: 2150-2155). Alternatively, the surface may have a relatively hydrophobic character, i.e., one that causes aqueous medium deposited on the surface to bead. A variety of known hydrophobic polymers, such as polystyrene, polypropylene, or polyethylene, have desirable hydrophobic properties, as do glass and a variety of lubricant or other hydrophobic films that may be applied to the support surface. A support surface is “hydrophobic” if an aqueous droplet applied to the surface does not spread out substantially beyond the area size of the applied droplet, wherein the surface acts to prevent spreading of the droplet applied to the surface by hydrophobic interaction with the droplet. In another aspect, the substrate may be a multi-cell substrate where each cell contains a microarray of Bacillus licheniformis and preferably an identical microarray, formed on a porous surface. For example, a 96-cell array may typically have array dimensions between about 12 and 244 mm in width and 8 and 400 mm in length, with the cells in the array having width and length dimension of 1/12 and ⅛ the array width and length dimensions, respectively, i.e., between about 1 and 20 in width and 1 and 50 mm in length. The solid support may include a water-impermeable backing such as a glass slide or rigid polymer sheet, or other non-porous material. Formed on the surface of the backing is a water-permeable film, which is formed of porous material. Such porous materials include, but are not limited to, nitrocellulose membrane nylon, polypropylene, and polyvinylidene difluoride (PVDF) polymer. The thickness of the film is preferably between about 10 and 1000 μm. The film may be applied to the backing by spraying or coating, or by applying a preformed membrane to the backing. Alternatively, the solid support may be simply a filter composed of nitrocellulose, nylon, polypropylene, or polyvinylidene difluoride (PVDF) polymer, or, for that matter, any material suitable for use. The film surface may be partitioned into a desirable array of cells by water-impermeable grid lines typically at a distance of about 100 to 2000 μm above the film surface. The grid lines can be formed on the surface of the film by laying down an uncured flowable resin or elastomer solution in an array grid, allowing the material to infiltrate the porous film down to the backing, and then curing the grid lines to form the cell-array substrate. The barrier material of the grid lines may be a flowable silicone, wax-based material, thermoset material (e.g., epoxy), or any other useful material. The grid lines may be applied to the solid support using a narrow syringe, printing techniques, heat-seal stamping, or any other useful method known in the art. Each well preferably contains a microarray of distinct Bacillus licheniformis genes. “Distinct Bacillus licheniformis genes” as applied to the genes forming a microarray is defined herein as an array member which is distinct from other array members on the basis of a different Bacillus licheniformis gene sequence or oligo sequence thereof, and/or different concentrations of the same or distinct Bacillus licheniformis genes and/or different mixtures of distinct Bacillus licheniformis genes or different-concentrations of Bacillus licheniformis genes. Thus an array of “distinct Bacillus licheniformis genes” may be an array containing, as its members, (i) distinct Bacillus licheniformis genes which may have a defined amount in each member, (ii) different, graded concentrations of a specific Bacillus licheniformis gene, and/or (iii) different-composition mixtures of two or more distinct Bacillus licheniformis genes. It will be understood, however, that in the methods of the present invention, any type of substrate known in the art may be used. The delivery of a known amount of a selected Bacillus licheniformis gene to a specific position on the support surface is preferably performed with a dispensing device equipped with one or more tips for insuring reproducible deposition and location of the Bacillus licheniformis genes and for preparing multiple arrays. Any dispensing device known in the art may be used in the methods of the present invention. See, for example, U.S. Pat. No. 5,807,522. For liquid-dispensing on a hydrophilic surface, the liquid will have less of a tendency to bead, and the dispensed volume will be more sensitive to the total dwell time of the dispenser tip in the immediate vicinity of the support surface. For liquid-dispensing on a hydrophobic surface, flow of fluid from the tip onto the support surface will continue from the dispenser onto the support surface until it forms a liquid bead. At a given bead size, i.e., volume, the tendency of liquid to flow onto the surface will be balanced by the hydrophobic surface interaction of the bead with the support surface, which acts to limit the total bead area on the surface, and by the surface tension of the droplet, which tends toward a given bead curvature. At this point, a given bead volume will have formed, and continued contact of the dispenser tip with the bead, as the dispenser tip is being withdrawn, will have little or no effect on bead volume. The desired deposition volume, i.e., bead volume, formed is preferably in the range 2 pl (picoliters) to 2 nl (nanoliters), although volumes as high as 100 nl or more may be dispensed. It will be appreciated that the selected dispensed volume will depend on (i) the “footprint” of the dispenser tip(s), i.e., the size of the area spanned by the tip(s), (ii) the hydrophobicity of the support surface, and (iii) the time of contact with and rate of withdrawal of the tip(s) from the support surface. In addition, bead size may be reduced by increasing the viscosity of the medium, effectively reducing the flow time of liquid from the dispensing device onto the support surface. The drop size may be further constrained by depositing the drop in a hydrophilic region surrounded by a hydrophobic grid pattern on the support surface. At a given tip size, bead volume can be reduced in a controlled fashion by increasing surface hydrophobicity, reducing time of contact of the tip with the surface, increasing rate of movement of the tip away from the surface, and/or increasing the viscosity of the medium. Once these parameters are fixed, a selected deposition volume in the desired picoliter to nanoliter range can be achieved in a repeatable fashion. After depositing a liquid droplet of a Bacillus licheniformis gene sample at one selected location on a support, the tip may be moved to a corresponding position on a second support, the Bacillus licheniformis gene sample is deposited at that position, and this process is repeated until the random nucleic acid fragment sample has been deposited at a selected position on a plurality of supports. This deposition process may then be repeated with another random nucleic acid fragment sample at another microarray position on each of the supports. The diameter of each Bacillus licheniformis gene region is preferably between about 20-200 μm. The spacing between each region and its closest (non-diagonal) neighbor, measured from center-to-center, is preferably in the range of about 20-400 μm. Thus, for example, an array having a center-to-center spacing of about 250 μm contains about 40 regions/cm or 1,600 regions/cm 2 . After formation of the array, the support is treated to evaporate the liquid of the droplet forming each region, to leave a desired array of dried, relatively flat Bacillus licheniformis gene or oligo thereof regions. This drying may be done by heating or under vacuum. The DNA can also be UV-crosslinked to the polymer coating. Nucleic Acid Probes. In the methods of the present invention, the strains are cultivated in a nutrient medium with and without a substrate using methods well known in the art for isolation of nucleic acids to be used as probes. For example, the strains may be cultivated by shake flask cultivation, small-scale or large-scale fermentation (including continuous, batch, fed-batch, or solid state fermentations) in laboratory or industrial fermentors performed in a suitable medium. The cultivation takes place in a suitable nutrient medium comprising carbon and nitrogen sources and inorganic salts, using procedures known in the art. Suitable media are available from commercial suppliers or may be prepared according to published compositions (e.g., in catalogues of the American Type Culture Collection). The nucleic acid probes from the microbial strains cultured on medium with and without substrate may be any nucleic acid including genomic DNA, cDNA, and RNA, and may be isolated using standard methods known in the art. The populations of isolated nucleic acid probes may be labeled with detection reporters such as colorimetric, radioactive for example, 32 P, 33 P, or 35 S), fluorescent reporters, or other reporters using methods known in the art (Chen et al., 1998 , Genomics 51: 313-324; DeRisi et al., 1997 , Science 278: 680-686; U.S. Pat. No. 5,770,367). In a preferred aspect, the probes are labeled with fluorescent reporters. For example, the DNA probes may be labeled during reverse transcription from the respective RNA pools by incorporation of fluorophores as dye-labeled nucleotides (DeRisi et al., 1997, supra), e.g., Cy5-labeled deoxyuridine triphosphate, or the isolated cDNAs may be directly labeled with different fluorescent functional groups. Fluorescent-labeled nucleotides include, but are not limited to, fluorescein conjugated nucleotide analogs (green fluorescence), lissamine nucleotide analogs (red fluorescence). Fluorescent functional groups include, but are not limited to, Cy3 (a green fluorescent dye) and Cy5 (red fluorescent dye). Array Hybridization. The labeled nucleic acids from the two strains cultivated with and without substrate are then added to an array of Bacillus licheniformis genes under conditions where the nucleic acid pools from the two strains hybridize to complementary sequences of the Bacillus licheniformis genes on the array. For purposes of the present invention, hybridization indicates that the labeled nucleic acids from the two strains hybridize to the Bacillus licheniformis genes under very low to very high stringency conditions. A small volume of the labeled nucleic acids mixture is loaded onto the substrate. The solution will spread to cover the entire microarray. In the case of a multi-cell substrate, one or more solutions are loaded into each cell which stop at the barrier elements. For nucleic acid probes of at least about 100 nucleotides in length, miroarray hybridization conditions described by Eisen and Brown, 1999 , Methods of Enzymology 303: 179-205, may be used. Hybridization is conducted under a cover slip at 65° C. in 3×SSC for 4-16 hours followed by post-hybridization at room temperature after removal of the cover slip in 2×SSC, 0.1% SDS by washing the array two or three times in the solution, followed by successive washes in 1×SSC for 2 minutes and 0.2×SSC wash for two or more minutes. Conventional conditions of very low to very high stringency conditions may also be used. Very low to very high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and either 25% formamide for very low and low stringencies, 35% formamide for medium and medium-high stringencies, or 50% formamide for high and very high stringencies, following standard Southern blotting procedures. The carrier material is finally washed three times each for 15 minutes using 2×SSC, 0.2% SDS preferably at least at 45° C. (very low stringency), more preferably at least at 50° C. (low stringency), more preferably at least at 55° C. (medium stringency), more preferably at least at 60° C. (medium-high stringency), even more preferably at least at 65° C. (high stringency), and most preferably at least at 70° C. (very high stringency). For shorter nucleic acid probes which are less than 50 nucleotides, microarray hybridization conditions described by Kane et al., 2000 , Nucleic Acids Research 28: 4552-4557, may be used. Hybridization is conducted under a supported coverslip at 42° C. for 16-18 hours at high humidity in 50% formamide, 4.1× Denhardt's solution, 4.4×SSC, and 100 μg/ml of herring sperm DNA. Arrays are washed after removal of the coverslip in 4×SSC by immersion into 1×SSC, 0.1% SDS for 10 minutes, 0.1×SSC, 0.1% SDS twice for 10 minutes, and 0.1×SSC twice for 10 minutes. For shorter nucleic acid probes which are about 50 nucleotides to about 100 nucleotides in length, conventional stringency conditions may be used. Such stringency conditions are defined as prehybridization, hybridization, and washing post-hybridization at 5° C. to 10° C. below the calculated T m using the calculation according to Bolton and McCarthy (1962 , Proceedings of the National Academy of Sciences USA 48:1390) in 0.9 M NaCl, 0.09 M Tris-HCl pH 7.6, 6 mM EDTA, 0.5% NP-40, 1× Denhardt's solution, 1 mM sodium pyrophosphate, 1 mM sodium monobasic phosphate, 0.1 mM ATP, and 0.2 mg of yeast RNA per ml following standard Southern blotting procedures. The carrier material is finally washed once in 6×SSC plus 0.1% SDS for 15 minutes and twice each for 15 minutes using 6×SSC at 5° C. to 10° C. below the calculated T m . The choice of hybridization conditions will depend on the degree of homology between the Bacillus licheniformis genes and the nucleic acid probes obtained from the strain cultured with and without inducing substrate. For example, where the nucleic acid probes and the Bacillus licheniformis genes are obtained from identical strains, high stringency conditions may be most suitable. Where the strains are from a genus or species different from which the Bacillus licheniformis genes were obtained, low or medium stringency conditions may be more suitable. In a preferred aspect, the hybridization is conducted under low stringency conditions. In a more preferred aspect, the hybridization is conducted under medium stringency conditions. In a most preferred aspect, the hybridization is conducted under high stringency conditions. The entire solid support is then reacted with detection reagents if needed and analyzed using standard colorimetric, radioactive, or fluorescent detection means. All processing and detection steps are performed simultaneously to all of the microarrays on the solid support ensuring uniform assay conditions for all of the microarrays on the solid support. Detection. The most common detection method is laser-induced fluorescence detection using confocal optics (Cheung et al., 1998 , Nat. Genet. 18: 225-230). The array is examined under fluorescence excitation conditions such that (i) the Bacillus licheniformis genes on the array that hybridize to the first nucleic acid probes obtained from the strain cultured without inducing substrate and to the second nucleic acid probes obtained from the strain cultured with inducing substrate produce a distinct first fluorescence emission color and a distinct second fluorescence emission color, respectively, and (ii) the Bacillus licheniformis genes on the array that hybridize to substantially equal numbers of nucleic acid probes obtained from the strain cultured without inducing substrate and from the strain cultured with inducing substrate produce a distinct combined fluorescence emission color; wherein the relative expression of the genes in the strains can be determined by the observed fluorescence emission color of each spot on the array. The fluorescence excitation conditions are based on the selection of the fluorescence reporters. For example, Cy3 and Cy5 reporters are detected with solid state lasers operating at 532 nm and 632 nm, respectively. However, other methods of detection well known in the art may be used such as standard photometric, calorimetric, or radioactive detection means, as described earlier. Data Analysis. The data obtained from the scanned image may then be analyzed using any of the commercially available image analysis software. The software preferably identifies array elements, subtracts backgrounds, deconvolutes multi-color images, flags or removes artifacts, verifies that controls have performed properly, and normalizes the signals (Chen et al., 1997 , Journal of Biomedical Optics 2: 364-374). Several computational methods have been described for the analysis and interpretation of microarray-based expression profiles including cluster analysis (Eisen et al., 1998 , Proc. Nat. Acad. Sci. USA 95: 14863-14868), parametric ordering of genes (Spellman et al., 1998 , Mol. Biol. Cell 9: 3273-3297), and supervised clustering methods based on representative hand-picked or computer-generated expression profiles (Chu et al., 1998 . Science 282: 699-705). Preferred methods for evaluating the results of the microarrays employ statistical analysis to determine the significance of the differences in expression levels. In the methods of the present invention, the difference in the detected expression level is at least about 10% or greater, preferably at least about 20% or greater, more preferably at least about 50% or greater, even more preferably at least about 75% or greater; and most preferably at least about 100% or greater. One such preferred system is the Significance Analysis of Microarrays (SAM) (Tusher et al., 2001 , Proc. Natl. Acad. Sci. USA 98: 5116-5121). Statistical analysis allows the determination of significantly altered expression of levels of about 50% or even less. The PAM (or predictive analysis for microarrays) represents another approach for analyzing the results of the microarrays (Tibshirani et al., 2002 , Proc. Natl. Acad. Sci. USA 99: 6567-6572). Cluster algorithms may also be used to analyze microarray expression data. From the analysis of the expression profiles it is possible to identify co-regulated genes that perform common metabolic or biosynthetic functions. Hierarchical clustering has been employed in the analysis of microarray expression data in order to place genes into clusters based on sharing similar patterns of expression (Eisen et al., 1998, supra). This method yields a graphical display that resembles a kind of phylogenetic tree where the relatedness of the expression behavior of each gene to every other gene is depicted by branch lengths. The programs Cluster and TreeView, both written by Michael Eisen (Eisen et al., 1998 Proc. Nat. Acad. Sci. USA 95: 14863-14868) are freely available. Genespring is a commercial program available for such analysis (Silicon Genetics, Redwood City, Calif.). Self-organizing maps (SOMs), a non-hierarchical method, have also been used to analyze microarray expression data (Tamayo et al., 1999 , Proc. Natl. Acad. Sci. USA 96: 2907-2912). This method involves selecting a geometry of nodes, where the number of nodes defines the number of clusters. Then, the number of genes analyzed and the number of experimental conditions that were used to provide the expression values of these genes are subjected to an iterative process (20,000-50,000 iterations) that maps the nodes and data points into multidimensional gene expression space. After the identification of significantly regulated genes, the expression level of each gene is normalized across experiments. As a result, the expression profile of the genome is highlighted in a manner that is relatively independent of each gene's expression magnitude. Software for the “GENECLUSTER” SOM program for microarray expression analysis can be obtained from the Whitehead/MIT Center for Genome Research. SOMs can also be constructed using the GeneSpring software package. Isolation of Genes. Probes containing genes or portions thereof identified to be induced by the present of substrate in the medium are characterized by determining the sequence of the probe. Based on the sequence, the gene can then be isolated using methods well known in the art. The techniques used to isolate or clone a gene include isolation from genomic DNA, preparation from cDNA, or a combination thereof. The cloning of the gene from such genomic DNA can be effected, e.g., by using the well known polymerase chain reaction (PCR) or antibody screening of expression libraries to detect cloned DNA fragments with shared structural features. See, e.g., Innis et al., 1990 , PCR: A Guide to Methods and Application , Academic Press, New York. Other nucleic acid amplification procedures such as ligase chain reaction (LCR), ligated activated transcription (LAT) and nucleic acid sequence-based amplification (NASBA) may be used. The gene may be cloned from the strain of interest, or another or related organism and thus, for example, may be an allelic or species variant of the gene. Methods for Monitoring Differential Expression of a Plurality of Genes The present invention also relates to methods for monitoring differential expression of a plurality of genes in a first bacterial cell relative to expression of the same genes in one or more second bacterial cells, comprising: (a) adding a mixture of detection reporter-labeled nucleic acids isolated from the bacterial cells to a substrate containing an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198, under conditions where the detection reporter-labeled nucleic acids hybridize to complementary sequences of the Bacillus licheniformis genes on the array, wherein the nucleic acids from the first bacterial cell and the one or more second bacterial cells are labeled with a first detection reporter and one or more different second detection reporters, respectively; and (b) examining the array under conditions wherein the relative expression of the genes in the bacterial cells is determined by the observed detection signal of each spot on the array in which (i) the Bacillus licheniformis genes on the array that hybridize to the nucleic acids obtained from either the first or the one or more second bacterial cells produce a distinct first detection signal or one or more second detection signals, respectively, and (ii) the Bacillus licheniformis genes on the array that hybridize to the nucleic acids obtained from both the first and one or more second bacterial produce a distinct combined detection signal. The methods of the present invention may be used to monitor global expression of a plurality of genes from a Bacillus cell, discover new genes, identify possible functions of unknown open reading frames, and monitor gene copy number variation and stability. For example, the global view of changes in expression of genes may be used to provide a picture of the way in which Bacillus cells adapt to changes in culture conditions, environmental stress, or other physiological provocation. Other possibilities for monitoring global expression include spore morphogenesis, recombination, metabolic or catabolic pathway engineering. The methods of the present invention are particularly advantageous since one spot on an array equals one gene or open reading frame because extensive follow-up characterization is unnecessary since sequence information is available, and the Bacillus licheniformis microarrays can be organized based on function of the gene products. Microarrays. Methods for preparing the microarrays are described herein. Bacterial Cells. In the methods of the present invention, the two or more Bacillus cells may be any Bacillus cell where one of the cells is used as a reference for identifying differences in expression of the same or similar complement of genes in the other cell(s). In one aspect, the two or more cells are the same cell. For example, they may be compared under different growth conditions, e.g., oxygen limitation, nutrition, and/or physiology. In another aspect, one or more cells are mutants of the reference cell. For example, the mutant(s) may have a different phenotype. In a further aspect, the two or more cells are of different species (e.g., Bacillus clausii and Bacillus subtilis ). In another further aspect, the two or more cells are of different genera. In an even further aspect, one or more cells are transformants of the reference cell, wherein the one or more transformants exhibit a different property. For example, the transformants may have an improved phenotype relative to the reference cell and/or one of the other transformants. The term “phenotype” is defined herein as an observable or outward characteristic of a cell determined by its genotype and modulated by its environment. Such improved phenotypes may include, but are not limited to, improved secretion or production of a protein or compound, reduced or no secretion or production of a protein or compound, improved or reduced expression of a gene, desirable morphology, an altered growth rate under desired conditions, relief of over-expression mediated growth inhibition, or tolerance to low oxygen conditions. The Bacillus cells may be any Bacillus cells, but preferably Bacillus alkalophilus, Bacillus amyloliquefaciens, Bacillus brevis, Bacillus cereus, Bacillus circulans, Bacillus clausii, Bacillus coagulans, Bacillus fastidiosus, Bacillus firmus, Bacillus lautus, Bacillus lentus, Bacillus licheniformis, Bacillus macerans, Bacillus megaterium, Bacillus methanolicus, Bacillus pumilus, Bacillus sphaericus, Bacillus stearothermophilus, Bacillus subtilis , or Bacillus thuringiensis cells. In a preferred aspect, the Bacillus cells are Bacillus alkalophilus cells. In another preferred aspect, the Bacillus cells are Bacillus amyloliquefaciens cells. In another preferred aspect, the Bacillus cells are Bacillus brevis cells. In another preferred aspect, the Bacillus cells are Bacillus cereus cells In another preferred aspect, the Bacillus cells are Bacillus circulans cells. In another preferred aspect, the Bacillus cells are Bacillus clausii cells. In another preferred aspect, the Bacillus cells are Bacillus coagulans cells. In another preferred aspect, the Bacillus cells are Bacillus fastidiosus cells. In another preferred aspect, the Bacillus cells are Bacillus firmus cells. In another preferred aspect, the Bacillus cells are Bacillus lautus cells. In another preferred aspect, the Bacillus cells are Bacillus lentus cells. In another preferred aspect, the Bacillus cells are Bacillus licheniformis cells. In another preferred aspect, the Bacillus cells are Bacillus macerans cells. In another preferred aspect, the Bacillus cells are Bacillus megaterium cells. In another preferred aspect, the Bacillus cells are Bacillus methanolicus cells. In another preferred aspect, the Bacillus cells are Bacillus pumilus cells. In another preferred aspect, the Bacillus cells are Bacillus sphaericus cells. In another preferred aspect, the Bacillus cells are Bacillus stearothermophilus cells. In another preferred aspect, the Bacillus cells are Bacillus subtilis cells. In another preferred aspect, the Bacillus cells are Bacillus thuringiensis cells. In a more preferred aspect, the Bacillus cells are Bacillus licheniformis cells. In a most preferred aspect, the Bacillus licheniformis cells are Bacillus licheniformis ATCC 14580 cells. In another more preferred aspect, the Bacillus cells are Bacillus clausii cells. In another most preferred aspect, the Bacillus clausii cells are Bacillus clausii NCIB 10309 cells. It will be understood that the term “ Bacillus ” also encompasses relatives of Bacillus such as Paenibacillus, Oceanobacillus, and the like. In the methods of the present invention, the cells are cultivated in a nutrient medium suitable for growth using methods well known in the art for isolation of the nucleic acids to be used as probes. For example, the cells may be cultivated by shake flask cultivation, small-scale or large-scale fermentation (including continuous, batch, fed-batch, or solid state fermentations) in laboratory or industrial fermentors performed in a suitable medium. The cultivation takes place in a suitable nutrient medium comprising carbon and nitrogen sources and inorganic salts, using procedures known in the art. Suitable media are available from commercial suppliers or may be prepared according to published compositions (e.g., in catalogues of the American Type Culture Collection). Nucleic Acid Probes. The nucleic acid probes from the two or more Bacillus cells may be any nucleic acid including genomic DNA, cDNA, and RNA, and may be isolated using standard methods known in the art, as described herein. The populations of isolated nucleic acid probes may be labeled with calorimetric, radioactive, fluorescent reporters, or other reporters using methods described herein. In a preferred aspect, the probes are labeled with fluorescent reporters, e.g., Cy3 (a green fluorescent dye) and Cy5 (red fluorescent dye), as described herein. Array Hybridization. The labeled nucleic acids from the two or more Bacillus cells are then added to a substrate containing an array of Bacillus licheniformis genes under conditions, as described herein, where the nucleic acid pools from the two or more Bacillus cells hybridize to complementary sequences of the Bacillus licheniformis genes on the array. Detection and Data Analysis. The same methods as described herein are used for detection and data analysis. Computer Readable Media and Computer-Based Systems The Bacillus licheniformis chromosome and its genes described herein may be “provided” in a variety of media to facilitate their use. The term “provided” refers to a manufacture comprising an array of Bacillus licheniformis genes. Such manufactures provide the Bacillus licheniformis genes in a form which allows one skilled in the art to examine the manufacture using means not directly applicable to examining the chromosome or a subset thereof as it exists in nature or in purified form. Thus, the present invention also relates to such a manufacture in the form of a computer readable medium comprising an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198. In one application of this aspect, the Bacillus licheniformis genes of the present invention can be recorded on computer readable media. The term “computer readable media” is defined herein as any medium which can be read and accessed by a computer. Such computer readable media include, but are not limited to, magnetic storage media, e.g., floppy discs, hard disc storage medium, and magnetic tape; optical storage media, e.g., CD-ROM, DVD; electrical storage media, e.g., RAM and ROM; and hybrids of these categories, e.g., magnetic/optical storage media. One skilled in the art can readily appreciate how any of the presently known computer readable media can be used to create a manufacture comprising computer readable medium having recorded thereon a nucleotide sequence of the present invention. Likewise, it will be clear to those of skill how additional computer readable media that may be developed also can be used to create analogous manufactures having recorded thereon a nucleotide sequence of the present invention. As used herein, “recorded” refers to a process for storing information on computer readable medium. One skilled in the art can readily adopt any of the presently known methods for recording information on computer readable medium to generate manufactures comprising the nucleotide sequence information of the present invention. A variety of data storage structures are available for creating a computer readable medium having recorded thereon a nucleotide sequence of the present invention. The choice of the data storage structure will generally be based on the means chosen to access the stored information. In addition, a variety of data processor programs and formats can be used to store the nucleotide sequence information of the present invention on computer readable medium. The sequence information can be represented in a word processing text file, formatted in commercially-available software such as WordPerfect and Microsoft Word, or represented in the form of an ASCII file, stored in a database application, such as DB2, Sybase, Oracle, or the like. A skilled artisan can readily adapt any number of data-processor structuring formats (e.g., text file or database) in order to obtain computer readable medium having recorded thereon the nucleotide sequence information of the present invention. Various computer software programs are publicly available that allow a skilled artisan to access sequence information provided in a computer readable medium. Thus, by providing in computer readable form an array of Bacillus licheniformis genes selected from the group consisting of nucleotides SEQ ID NOs: 2-4198, complementary strands of SEQ ID NOs: 2-4198, or fragments of SEQ ID NOs: 2-4198, enables one skilled in the art to routinely access the provided sequence information for a wide variety of purposes. Software utilizing the BLAST (Altschul et al., 1990, supra), BLAZE (Brutlag et al., 1993 , Comp. Chem. 17: 203-207), GENEMARK (Lukashin and Borodovsky, 1998 , Nucleic Acids Research 26: 1107-1115), GENSCAN (Burge and Karlin, 1997 , Journal of Molecular Biology 268: 78-94), GLIMMER (Salzberg et al., 1998 , Nucleic Acids Research 26: 544-548), and GRAIL (Xu et al., 1994 , Comput. Appl. Biosci. 10: 613-623) search algorithms may be used to identify open reading frames (ORFs) within a genome of interest, which contain homology to ORFs or proteins from both Bacillus licheniformis and Bacillus clausii and from other organisms. Among the ORFs discussed herein are protein encoding fragments of the Bacillus licheniformis and Bacillus clausii genomes useful in producing commercially important proteins, such as enzymes used in fermentation reactions and in the production of commercially useful metabolites. The present invention further provides systems, particularly computer-based systems, which contain the sequence information described herein. Such systems are designed to identify, among other things, genes and gene products—many of which could be products themselves or used to genetically modify an industrial expression host through increased or decreased expression of a specific gene sequence(s). The term “a computer-based system” is herein defined as the hardware means, software means, and data storage means used to analyze the nucleotide sequence information of the present invention. The minimum hardware means of the computer-based systems of the present invention comprises a central processing unit (CPU), input means, output means, and data storage means. One skilled in the art can readily appreciate that any currently available computer-based system is suitable for use in the present invention. As stated above, the computer-based systems of the present invention comprise a data storage means having stored therein a nucleotide sequence of the present invention and the necessary hardware means and software means for supporting and implementing a search means. The term “data storage means” is defined herein as memory which can store nucleotide sequence information of the present invention, or a memory access means which can access manufactures having recorded thereon the nucleotide sequence information of the present invention. The term “search means” refers is defined herein as one or more programs which are implemented on the computer-based system to compare a target sequence or target structural motif with the sequence information stored within the data storage means. Search means are used to identify fragments or regions of the present genomic sequences which match a particular target sequence or target motif. A variety of known algorithms are disclosed publicly and a variety of commercially available software for conducting search means are and can be used in the computer-based systems of the present invention. Examples of such software includes, but is not limited to, MacPattern (Fuchs, 1991 , Comput. Appl. Biosci. 7: 105-106), BLASTN and BLASTX National Center for Biotechnology Information (NCBI). One skilled in the art can readily recognize that any one of the available algorithms or implementing software packages for conducting homology searches can be adapted for use in the present computer-based systems. The term “target sequence” is defined here as any DNA (genomic DNA, cDNA) or amino acid sequence of six or more nucleotides or two or more amino acids. One skilled in the art can readily recognize that the longer a target sequence is, the less likely a target sequence will be present as a random occurrence in the database. The most preferred sequence length of a target sequence is from about 10 to 100 amino acids or from about 30 to 300 nucleotide residues. However, it is well recognized that searches for commercially important fragments, such as sequence fragments involved in gene expression and protein processing, may be of shorter length. The term “a target structural motif” or “target motif” is defined herein as any rationally selected sequence or combination of sequences in which the sequence(s) are chosen based on a three-dimensional configuration which is formed upon the folding of the target motif. There are a variety of target motifs known in the art. Protein target motifs include, but are not limited to, enzyme active sites and signal sequences, substrate and cofactor binding domains, transmembrane domains, and sites for post-translational modifications. Nucleic acid target motifs include, but are not limited to, promoter sequences, hairpin structures and inducible expression elements (protein binding sequences), repeats, palindromes, dyad symmetries, and transcription and translation start and stop sites. A variety of structural formats for the input and output means can be used to input and output the information in the computer-based systems of the present invention. A preferred format for an output means ranks fragments of the Bacillus licheniformis or Bacillus clausii genomic sequences possessing varying degrees of homology to the target sequence or target motif. Such presentation provides one skilled in the art with a ranking of sequences which contain various amounts of the target sequence or target motif and identifies the degree of homology contained in the identified fragment. A variety of comparing means can be used to compare a target sequence or target motif with the data storage means to identify sequence fragments of the Bacillus licheniformis and Bacillus clausii genomes. For example, implementing software which utilize the BLAST and BLAZE algorithms, described in Altschul et al., 1990, supra, may be used to identify open reading frames within the Bacillus licheniformis or Bacillus clausii genome or the genomes of other organisms. A skilled artisan can readily recognize that any one of the publicly available homology search programs can be used as the search means for the computer-based systems of the present invention. Suitable proprietary systems that may be known to those of skill also may be employed in this regard. Codon Usage Tables The present invention further relates to methods for preparing a synthetic gene, comprising (a) generating a codon usage table based on codons used in one or more open reading frames or portions thereof of SEQ ID NO: 1, (b) constructing a synthetic gene or portion thereof that contains in place of one or more native codons one or more preferred codons from the codon usage table, and (c) recovering the synthetic gene. In a preferred aspect, the codon usage table is Table 4 and/or Table 5. The Bacillus licheniformis chromosomal sequence of SEQ ID NO: 1 or portions thereof can be used to generate codon usage tables to design synthetic genes for their efficient heterologous expression in Bacillus licheniformis host cells. The codon usage tables can be based on (1) the codon used in all the open reading frames, (2) selected open reading frames, (3) fragments of the open reading frames, or (4) fragments of selected open reading frames. With a codon usage table, synthetic genes can be designed with only the most preferred codon for each amino acid; with a number of common codons for each amino acid; or with the same or a similar statistical average of codon usages found in the table of choice. The synthetic gene can be constructed using any method such as site-directed mutagenesis or PCR generated mutagenesis in accordance with methods known in the art. Although, in principle, the modification may be performed in vivo, i.e., directly on the cell expressing the nucleotide sequence to be modified, it is preferred that the modification is performed in vitro. The synthetic gene can be further modified by operably linking the synthetic gene to one or more control sequences which direct the expression of the coding sequence in a suitable host cell under conditions compatible with the control sequences using the methods described herein. Nucleic acid constructs, recombinant expression vectors, and recombinant host cells comprising the synthetic gene can also be prepared using the methods described herein. The present invention also relates to methods for producing a polypeptide encoded by such a synthetic gene comprising (a) cultivating a host cell comprising the synthetic gene under conditions conducive for production of the polypeptide; and (b) recovering the polypeptide. The present invention is further described by the following examples which should not be construed as limiting the scope of the invention. EXAMPLES Example 1 Shotgun DNA Sequencing and Genome Assembly The genome of the type strain Bacillus licheniformis ATCC 14580 was sequenced by a combination of the whole genome shotgun method described by Wilson, R. K. and Mardis, E. R., 1997, In Genome Analysis: A Laboratory Manual , Vol. 1, eds. Birren, B., Green, E. D., Meyers, R. M., and Roskams, J. (Cold Spring Harbor Press, Cold Spring Harbor, N.Y.), pp. 397-454, and fosmid end sequencing (Kim, U. J., Shizuya, H., de Jong, P. J., Birren, B. and Simon, M. I., 1992 , Nucleic Acids Res. 20: 1083-1085; Longmire, J. L. and Brown, N.C., 2003 , Biotechniques 35: 50-54; Zhao, S., Malek, J., Mahairas, G., Fu, L., Nierman, W., Venter, J. C., and Adams, M. D., 2000 , Genomics 63: 321-332). Genomic DNA of Bacillus licheniformis ATCC 14580 was isolated using the following method: A single colony was used to inoculate 20 ml of LB broth (Davis, R. W., Botstein, D., and Roth, J. R. 1980 , Advanced Bacterial Genetics , Cold Spring Harbor Press, Cold Spring Harbor, N.Y.) in a sterile 125 ml Erlenmeyer flask. The culture was incubated at 37° C. overnight with agitation at 240 rpm. The resulting cells were collected by centrifugation in a 45 ml Oak Ridge tube for 10 minutes at 6000×g, and the cell pellet was resuspended in 5 ml of Tris-glucose buffer (50 mM Tris-HCl, pH 8.0, 50 mM glucose, 10 mM EDTA). Lysozyme was added to a final concentration of 50 μg/ml and the suspension was incubated in a 37° C. water bath for 25 minutes. Next, 200 μl of 10% SDS was added and the tubes were gently inverted several times. Five milliliters of a second detergent mixture (1% Brij, 1% deoxycholate, 50 mM EDTA, pH 7.5) was added, and the tubes were inverted several times while incubating for 20 minutes at room temperature. An equal volume of phenol:chloroform (1:1 v/v) was added and the tubes were inverted gently at room temperature for 20-30 minutes. The tubes were centrifuged for 20 minutes at 12,000×g, 4° C. The top aqueous layer was carefully removed with a wide-bore pipette and placed in a clean 45 ml Oak Ridge tube. The phenol;chloroform extraction was repeated and 1/10 volume of 3 M sodium acetate pH 5.2 was added to the aqueous layer. Two volumes of cold ethanol were carefully layered on top and the DNA was spooled from the solution onto a sterile glass rod. Spooled DNA was carefully rinsed in 70% ethanol and resuspended in a suitable amount of TE buffer (10 mM Tris-HCl, pH 8.0, 1 mM EDTA). Plasmid libraries were constructed using randomly-sheared and BamHI-digested genomic DNA that was enriched for 2-3 kb fragments by preparative agarose gel electrophoresis (Berka, R. M., Schneider, P., Golightly, E. J., Brown, S. H., Madden, M., Brown, K. M., Halkier, T., Mondorf, K., and Xu, F., 1997 , Appl. Environ. Microbiol. 63: 3151-3157). Approximately 49,000 random clones were sequenced using dye-terminator chemistry (Applied Biosystems, Foster City, Calif.) with ABI 377 and ABI 3700 automated sequencers yielding approximately 6× coverage of the genome. A combination of methods was employed for gap closure including sequencing on fosmids (Kim, U. J., Shizuya, H., de Jong, P. J., Birren, B., and Simon, M. I., 1992 , Nucleic Acids Res. 20: 1083-1085), primer walking on selected clones, and PCR-amplified DNA fragments. Fosmid libraries were constructed using a commercial kit from Epicentre (Madison. WI). Data from both ends of approximately 1975 fosmid clones with an average insert size of 40 kb were incorporated to aid in validation of the final assembly. In total, the number of input reads was 62,685 with 78.6% of these incorporated into the final assembly. Sequences were base called using TraceTuner 2.0 (Paracel, Inc., Pasadena, Calif.) and assembled using the Paracel Genome Assembler (Paracel, Inc., Pasadena, Calif.) with optimized parameters and the quality score set to >20. Phrap, Crossmatch, and Consed were used for sequence finishing (Gordon D., Abajian C., and Green P., 1998 , Genome Res. 8: 195-202). Example 2 Identification And Annotation of Open Reading Frames (ORFs) Protein coding regions in the assembled genome sequence data were identified using EasyGene (Larsen, T. S., and Krogh, A., 2003 , BMC Bioinformatics 4: 21), Glimmer (Delcher, A, L., Harmon, D., Kasif, S., White, O. and Salzberg, S. L., 1999 , Nucleic Acids Res. 27, 4636-4641), and FrameD (Schiex, T., Gouzy, J., Moisan, A. and de Oliveira, Y., 2003 , Nucleic Acids Res. 31, 3738-3741). Only EasyGene gene models with an R-value of less than 2 and log-odds score greater than −10 were used. Predicted proteins were compared to the non-redundant database PIR-NREF (Wu, C. H., Huang, H., Arminski, L., Castro-Alvear, J., Chen, Y., Hu, Z. Z., Ledley, R. S., Lewis, K. C., Mewes, H. W., Orcutt, B. C., 2002 , Nucleic Acids Research 30: 35-37) and the Bacillus subtilis genome (SubtilList) using BLASTP with an E-value threshold of 10 −5 . InterProScan was used to predict putative function. (Zdobnov, E. M. and Apweiler, R., 2001 , Bioinformatics 17, 847-848). The InterPro analysis included comparison to Pfam (Bateman, A., Coin, L., Durbin, R., Finn, R. D., Hollich, V., Griffiths-Jones, S., Khanna, A., Sonnhammer, E. L. et al., 2004 , Nucleic Acids Res. 32, D138-D141), TIGRfam (Haft, D. J., Selengut, J. D. and White, O., 2003 , Nucleic Acids Res. 31: 371-373), Interpro (Apweiler, R., Attwood, T. K., Bairock, A., Bateman, A., Birney, E., Biswas, M., Bucher, P., Cerutti, L., Corpet, F., Croning, M. D., et al., 2001 , Nucleic Acids Res. 29: 37-40), signal peptide prediction using SignalP (Nielsen, H., Engelbrecht, J., Brunak, S., and von Heijne, G., 1997 , Protein Engineering 10: 1-6), and trans-membrane domain prediction using TMHMM (Krogh, A., Larsson, B., von Heijne, G. and Sonnhammer, E. L. L., 2000 , J. Mol. Biol. 305, 567-580). These ORFs were assigned to functional categories based on the Cluster of Orthologous Groups (COG) database with manual verification as described (Tatusov, R. L., Koonin, E. V. and Lipman, D. J., 1997, Science 278: 631-637; Koonin, E. V. and Galperin, M. Y., 2002, Sequence-Evolution-Function: Computational Approaches in Comparative Genomics (Kluwer, Boston)). Transfer RNA genes were identified using tRNAscan-SE (Lowe, T. M. and Eddy, S. R., 1997 , Nucleic Acids Res. 25: 955-964). Example 3 General Features of the Bacillus licheniformis Genome The genome of Bacillus licheniformis ATCC 14580 was determined to consist of a circular molecule of 4,222,336 bp with an average GC content of 46.2% (Table 2). No plasmids were found during the genome analysis, and none were found by agarose gel electrophoresis. The genome contains 4208 predicted protein-coding genes with an average size of 873 bp, seven rRNA operons, and 81 tRNA genes. Using a combination of several gene-finding algorithms 4208 protein coding ORFs were predicted. These ORFs constitute 87% of the genome and have an average length of 873 bp. Approximately 48% of the ORFs are encoded on one DNA strand and 52% on the other strand. Among the protein coding ORFs, 3948 (94%) have significant similarity to proteins in PIR, and 3187 of these gene models contain Interpro motifs and 2895 contain protein motifs found in PFAM. The number of hypothetical and conserved hypothetical proteins in the Bacillus licheniformis genome with hits in the PIR database was 1318 (212 conserved hypothetical ORFs). Among the list of hypothetical and conserved hypothetical ORFs, 683 (52%) have protein motifs contained in PFAM (148 conserved hypothetical ORFs). There are 72 tRNA genes representing all 20 amino acids and 7 rRNA operons. The likely origin of replication was identified by similarities to several features of Bacillus subtilis origin (Moriya, S., Fukuoka, T., Ogasawara, N., and Yoshikawa, H., 1988 , EMBO Journal 7: 2911-2917; Ogasawara, N., Nakai, S., and Yoshikawa, H., 1994, DNA Res. 1, 1-14; Kadoya, R., Hassan, A. K., Kasahara, Y., Ogasawara, N., and Moriya, S., 2002 , Mol. Microbiol. 45: 73-87; Tosato, V., Gjuracic, K., Vlahovicek, K., Pongor, S., Danchin, A., and Bruschi, C. V., 2003 , FEMS Microbiol. Lett 218: 23-30). These included (a) colocalization of four genes (rpmH, dnaA, dnaN, and recF) found near the origin of the Bacillus subtilis chromosome, (b) GC nucleotide skew [(G−C)/(G+C)] analysis, and (c) the presence of multiple dnaA-boxes (Pedersen, A. G., Jensen, L. J., Brunak, S., Staerfeldt, H. H., and Ussery, D. W., 2000 , Mol. Biol. 299: 907-930; Christensen, B. B., Atlung, T., and Hansen, F. G., 1999 , J. Bacteriol. 181: 2683-2688; Majka, J., Jakimowicz, D., Messer, W., Schrempf, H., Lisowski, M., and Zakrzewska-Czerwińska, J., 1999 , Eur. J. Biochem. 260: 325-335) and AT-rich sequences in the region immediately upstream of the dnaA gene. On the basis of these observations, a cytosine residue of the BstBl restriction site was assigned between the rpmH and dnaA genes to be the first nucleotide of the Bacillus licheniformis genome. The replication termination site was localized near 2.02 Mb by GC skew analysis. This region lies roughly opposite the origin of replication. Unlike Bacillus subtilis , no apparent gene encoding a replication terminator protein (rtp) was found in Bacillus licheniformis . The Bacillus halodurans genome also lacks an rtp function (Takami, H., Nakasone, K., Takaki, Y., Maeno, G., Sasaki, R., Masui, N., Fuji, F., Hirama, C., Nakamura, Y., Ogasawara, N. et al., 2000 , Nucleic Acids Res. 28: 4317-4331), and it seems likely that Bacillus subtilis acquired the rtp gene following its divergence from Bacillus halodurans and Bacillus licheniformis. Transposable elements and prophages. The genome of Bacillus licheniformis ATCC 14580 was determined to contain nine identical copies of a 1285 bp insertion sequence element termed IS3BIi1 (Lapidus, A., Galleron, N., Andersen, J. T., Jørgensen, P. L. Ehrlich, S. D., and Sorokin, A., 2002 , FEMS Microbiol. Lett. 209: 23-30). This sequence shares a number of features with other IS3 family elements including direct repeats of three to five bp, a ten bp left inverted repeat, and a nine bp right inverted repeat. IS3BIi1 encodes two predicted overlapping ORFs, designated orfA and orfB in relative translational reading frames of 0 and −1. The presence of a “slippery heptamer” motif, AAAAAAG, before the stop codon in orfA suggests that programmed translational frameshifting occurs between these two ORFs, resulting in a single gene product (Farabaugh, P., 1996 , Microbiol. Rev. 60: 103-134). The orfB gene product harbors the DD[35]E[7]K motif, a highly conserved pattern among insertion sequences. Eight of the IS3BIi1 elements lie in intergenic regions, and one interrupts the comP gene. In addition to these insertion sequences, the genome encodes a putative transposase that is most closely related (E=1.8e−11) to one identified in the Thermoanaerobacter tengcongensis genome (Bao, Q., Tian, Y., Li, W., Xu, Z.; Xuan, Z., Hu, S., Dong, W., Yang, J., Chen, Y., Xue, Y., et al., 2002 , Genome Res. 12: 689-700), however, similar genes are also found in the chromosomes of Bacillus halodurans (Takami, H., Nakasone, K., Takaki, Y., Maeno, G., Sasaki, R., Masui, N., Fuji, F., Hirama, C., Nakamura, Y., Ogasawara, N. et al., 2000 , Nucleic Acids Res. 28: 4317-4331), Oceanobacillus iheyensis (Takami, H., Takaki, Y., and Uchiyama, I., 2002 , Nucleic Acids Res. 30: 3927-3935.), Streptococcus agalactiae (Takahashi, S., Detrick, S., Whiting, A. A, Blaschke-Bonkowksy, A. J., Aoyagi, Y., Adderson, E. E., and Bohnsack, J. F., 2002 , J. Infect Dis. 186: 1034-1038), and Streptococcus pyogenes (Smoot, J. C., Barbian, K. D., Van Gompel, J. J., Smoot, L. M., Chaussee, M. S., Sylva, G. L., Sturdevant, D. E., Ricklefs, S. M., Porcella, S. F., Parkins, L. D., et al., 2002 , Proc. Natl. Acad. Sci. U.S.A. 99: 4668-4673). The presence of several bacteriophage lysogens or prophage-like elements was revealed by Smith-Waterman comparisons to other bacterial genomes and by their AT-rich signatures. Prophage sequences, designated NZP1 and NZP3 (similar to PBSX and φ-105, respectively), were uncovered by noting the presence of nearby genes encoding the large subunit of terminase, a signature protein that is highly conserved among prophages (Casjens, S., 2003 , Mol. Microbiol. 49: 277-300). A terminase gene was not observed in a third putative prophage, termed NZP2 (similarity to SPP1), however, its absence may be the result of genome deterioration during evolution. Regions were observed in which the GC content is less than 39% usually encoded proteins that have no Bacillus subtilis orthologue and share identity only to hypothetical and conserved hypothetical genes. Two of these AT-rich segments correspond to the NZP2 and NZP3 prophages. An isochore plot also revealed the presence of a region with an atypically high (62%) G+C content. This segment contains two hypothetical ORFs whose sizes (3831 and 2865 bp) greatly exceed the size of an average gene in Bacillus licheniformis . The first protein encodes a protein of 1277 amino acids for which Interpro predicted 16 collagen triple helix repeats, and the amino acid pattern TGATGPT is repeated 75 times within the polypeptide. The second ORF is smaller, and encodes a protein with 11 collagen triple helix repeats, and the same TGATGPT motif recurs 56 times. Interestingly, the chromosomal region (19 kb) adjacent to these genes is clearly non-colinear with the Bacillus subtilis genome, and virtually all of the predicted ORFs are hypothetical or conserved hypothetical proteins. There are a number of bacterial proteins listed in PIR that contain collagen triple helix repeat regions including two from Mesorhizobium loti (accession numbers NF00607049 and NF00607035) and three from Bacillus cereus (accession numbers NF01692528, NF01269899, and NF01694666). These putative orthologs share 53-76% amino acid sequence identity with their counterparts in Bacillus licheniformis , although their functions are unknown. Extracellular enzymes. In the Bacillus licheniformis genome, 689 of the 4208 gene models have signal peptides as forecasted by SignalP (Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Henrik Nielsen, Jacob Engelbrecht, Søren Brunak and Gunnar von Heijne, 1997 , Protein Engineering 10: 1-6). Of these, 309 have no trans-membrane domain as predicted with TMHMM (A. Krogh, B. Larsson, G. von Heijne, and E. L. L. Sonnhammer, 2000 , Journal of Molecular Biology 305: 567-580) and 134 are hypothetical or conserved hypothetical genes. Based on a manual examination of the remaining 175 ORFs, at least 82 were determined to likely encode secreted proteins and enzymes. The sequence ID numbers for each of these genes are listed in Table 3. Protein secretion, sporulation, and competence pathways. Kunst et al. (Kunst, F., Ogasawara, N, Mozser, I., Albertini, A. M., Alloni, G., Azebedo, V., Bertero, M. G., Bessieres, P., Bolotin, A., and Borchert, S., 1997 , Nature 390: 249-256) listed 18 genes that play a major role in the secretion of extracellular enzymes by Bacillus subtilis 168. This list includes several chaperonins, signal peptidases, components of the signal recognition particle and protein translocase complexes. Thus, it is reasonable to expect that the central features of the secretory apparatus are conserved in Bacillus subtilis and Bacillus licheniformis. From the list of 139 sporulation genes tabulated by Kunst et al. (Kunst, F., Ogasawara, N, Mozser, I., Albertini, A. M., Alloni, G., Azebedo, V., Bertero, M. G., Bessieres, P., Bolotin, A., and Borchert, S. et al., 1997 , Nature 390: 249-256), all but six have obvious counterparts in Bacillus licheniformis . These six exceptions (spsABCEFG) comprise an operon involved in synthesis of spore coat polysaccharide in Bacillus subtilis . Additionally, the response regulator gene family (phrACEFGI) appears to have a low level of sequence conservation between Bacillus subtilis and Bacillus licheniformis. Natural competence (the ability to take up and process exogenous DNA in specific growth conditions) is a feature of few Bacillus licheniformis strains (Gwinn, D. D. and Thorne, C. B., 1964 , J. Bacteriol. 87: 519-526). The reasons for variability in competence phenotype have not been explored at the genetic level, but the genome data offered several possible explanations. Although the type strain genome encodes all of the late competence functions ascribed in Bacillus subtilis (e.g., comC, comEFG operons, comk, mecA), it lacks an obvious comS gene, and the comP gene is punctuated by an insertion sequence element, suggesting that the early stages of competence development have been preempted in Bacillus licheniformis ATCC 14580. Whether these early functions can be restored by introducing the corresponding genes from Bacillus subtilis is unknown. In addition to an apparent deficiency in DNA uptake, two Type I restriction-modification systems were discovered that may also contribute diminished transformation efficiencies. These are distinct from the ydiOPS genes of Bacillus subtilis , and could participate in degradation of improperly modified DNA from heterologous hosts used during construction of recombinant expression vectors. Lastly, the synthesis of a glutamyl polypeptide capsule has also been implicated as a potential barrier to transformation of Bacillus licheniformis strains (Thorne, C. B. and Stull, H. B., 1966 , J. Bacteriol. 91: 1012-1020). Six genes were predicted (ywtABDEF and ywsC orthologues) that may be involved in the synthesis of this capsular material. Antibiotics and secondary metabolites. Bacitracin is a cyclic peptide antibiotic that is synthesized non-ribosomally in Bacillus licheniformis (Katz, E. and Demain, A. L., 1977 , Bacteriol. Rev. 41: 449-474). White there is variation in the prevalence of bacitracin synthase genes in laboratory strains of this species, one study suggested that up to 50% may harbor the bac operon (Ishihara, H., Takoh, M., Nishibayashi, R., and Sato, A., 2002 , Curr. Microbiol. 45: 18-23). The bac operon was determined not to be present in the type strain (ATCC 14580) genome. Seemingly, the only non-ribosomal peptide synthase operon encoded by the Bacillus licheniformis type strain genome is that which is responsible for lichenysin biosynthesis. Lichenysin structurally resembles surfactin from Bacillus subtilis (Grangemard, I., Wallach, J., Maget-Dana, R., and Peypoux, F., 2001 , Appl. Biochem. Biotechnol. 90: 199-210), and their respective biosynthetic operons are highly similar. No Bacillus licheniformis counterparts were found for the pps (plipastatin synthase) and polyketide synthase (pks) operons of Bacillus subtilis . Collectively, these two regions represent sizeable portions (80 kb and 38 kb, respectively) of the chromosome in Bacillus subtilis , although they are reportedly dispensable (Westers, H., Dorenbos, R., van Dijl, J. M., Kable, J., Flanagan, T., Devine, K. M., Jude, F., Séror, S. J., Beekman, A. C., Darmon, E., 2003 , Mol. Biol. Evol. 20: 2076-2090). Unexpectedly, a gene cluster was found encoding a lantibiotic and associated processing and transport functions. This peptide of 69 amino acids was designated as lichenicidin, and its closest known orthologue is mersacidin from Bacillus sp. strain HIL-Y85/54728 (Altena, K., Guder, A., Cramer, C., and Bierbaum, G., 2000 , Appl. Environ. Microbiol. 66: 2565-2571). Lantibiotics are ribosomally synthesized peptides that are modified post-translationally so that the final molecules contain rare thioether amino acids such as lanthionine and/or methyl-lanthionine (Pag, U. and Sahl, H. G., 2002 , Curr. Pharm. Des. 8: 815-833). These antimicrobial compounds have attracted much attention in recent years as models for the design of new antibiotics (Hoffmann, A., Pag, U., Wiedemann, I., and Sahl, H. G., 2002 , Farmaco. 57: 685-691). Essential Genes. The gene models were also compared to the list of essential genes in Bacillus subtilis (Kobayashi, K., Ehrlich, S. D., Albertini, A., Amati, G., Andersen, K. K., Arnaud, M., Asai, K., Ashikaga, S., Aymerch, S., Bessieres, P., 2003 , Proc. Natl Acad. Sci. USA 100: 4678-4683). All the essential genes in Bacillus subtilis have orthologues in Bacillus licheniformis , and most are present in a wide range of bacterial taxa (Pedersen, P. B., Bjørnvad, M. E., Rasmussen, M. D., and Petersen, J. N., 2002 , Reg. Toxicol. Pharmacol. 36: 155-161). Example 4 Comparison of Bacillus licheniformis Genome with Other Bacilli VisualGenome software (Rational Genomics, San Francisco, Calif.) was used for GC-skew analysis and global homology comparisons of the Bacillus licheniformis, Bacillus subtilis , and Bacillus halodurans genomes with pre-computed BLAST results stored in a local database. In pairwise comparisons (E-score threshold of 10 −5 ) 66% (2771/4208) of the predicted Bacillus licheniformis ORFs have orthologs in Bacillus subtilis , and 55% (2321/4208) of the gene models are represented by orthologous sequences in Bacillus halodurans . Using a reciprocal BLASTP analysis 1719 orthologs were found that are common to all three species (E-score threshold of 10 −5 ). As noted by Lapidus et al., (Lapidus, A., Galleron, N., Andersen, J. T., Jørgensen, P. L. Ehrlich, S. D., and Sorokin, A., 2002 , FEMS Microbiol. Lett. 209: 23-30), there are broad regions of colinearity between the genomes of Bacillus licheniformis and Bacillus subtilis . Less conservation of genome organization exists between Bacillus licheniformis and Bacillus halodurans , and inversion of one or more large genomic segments is evident. Clearly this supports previous findings (Xu, D. and Côté, J. C., 2003 , Internat. J. Syst. Evol. Microbiol. 53: 695-704) that Bacillus subtilis and Bacillus licheniformis are phylogenetically and evolutionarily closer than either species is to Bacillus halodurans . However, a number of important differences were also observed, both in the numbers and locations of prophages and transposable elements and in a number of biochemical pathways, which distinguish Bacillus licheniformis from Bacillus subtilis , including a region of more than 80 kb that comprises a cluster of polyketide synthase genes that are absent in Bacillus licheniformis. Example 5 Codon Usage Tables The evolution of codon bias, the unequal usage of synonomous codons, is thought to be due to natural selection for the use of preferred codons that match the most abundant species of isoaccepting tRNAs, resulting in increased translational efficiency and accuracy. The practical applications for utilizing codon bias information include optimizing expression of heterologous and mutant genes (Jiang and Mannervik, 1999 , Protein Expression and Purification 15: 92-98), site-directed mutagenesis to derive variant polypeptides from a given gene (Wong et al., 1995 , J. Immunol. 154: 3351-3358; Kaji, H. et al., 1999 , J. Biochem. 126: 769-775), design and synthesis of synthetic genes (Libertini and Di Donato, 1992 , Protein Engineering 5: 821-825; Feng et al., 2000 , Biochem. 39: 15399-15409), and fine-tuning or reducing of translation efficiency of specific genes by introduction of non-preferred codons (Crombie, T. et al., 1992 , J. Mol. Biol. 228: 7-12; Carlini and Stephan, 2003 , Genetics 163: 239-243). A codon usage table (Table 4) was generated from SEQ ID NO: 1 with CUSP, a software component of the EMBOSS package (Rice, Longden, and Bleasby, 2000, EMBOSS: The European Molecular Biology Open Software Suite. Trends in Genetics 16: 276-277) on all the predicted protein-coding genes of the Bacillus licheniformis chromosome. CUSP read the coding sequences and calculated the codon frequency table shown in Table 4. A codon usage table (Table 5) was also generated based on the signal peptides of the 82 extracellular proteins described in Example 3. TABLE 1Predicted functionsBacillussubtilishomologSEQ ID(GeneNO.DescriptionUniRef Accession No.OrganismName)2Chromosomal replication initiatorUniRef100_P05648Bacillus subtilisDnaAprotein dnaA [ Bacillus subtilis ]3DNA polymerase III, beta chainUniRef100_P05649Bacillus subtilisDnaN[ Bacillus subtilis ]45DNA replication and repair protein recFUniRef100_P05651Bacillus subtilisRecF[ Bacillus subtilis ]67DNA gyrase subunit B [ Bacillus subtilis ]UniRef100_P05652Bacillus subtilisGyrB8DNA gyrase subunit A [ Bacillus subtilis ]UniRef100_P05653Bacillus subtilisGyrA9YaaC10Inosine-5′-monophosphateUniRef100_P21879Bacillus subtilisGuaBdehydrogenase [ Bacillus subtilis ]11D-alanyl-D-alanine carboxypeptidaseUniRef100_P08750Bacillus subtilisDacAprecursor [ Bacillus subtilis ]12Pyridoxine biosynthesis protein pdx1UniRef100_P37527Bacillus subtilisYaaD[ Bacillus subtilis ]13Hypothetical UPF0030 protein yaaEUniRef100_P37528Bacillus subtilisYaaE[ Bacillus subtilis ]14Seryl-tRNA synthetase [ BacillusUniRef100_P37464Bacillus subtilisSerSsubtilis ]15Glycerate kinase [ Bacillus subtilis ]UniRef100_P42100Bacillus subtilisYxaA16H+/gluconate symporter [ VibrioUniRef100_Q7MHW6Vibrio vulnificusYuiFvulnificus ]17Sugar diacid utilization regulator [ VibrioUniRef100_Q8DBZ9Vibrio vulnificusYsfBvulnificus ]18Hypothetical protein [ BacillusUniRef100_Q6HH43Bacillus thuringiensisthuringiensis ]19Hypothetical protein yaaF [ BacillusUniRef100_P37529Bacillus subtilisDcksubtilis ]20Hypothetical protein yaaG [ BacillusUniRef100_P37530Bacillus subtilisDgksubtilis ]21Hypothetical protein yaaH [ BacillusUniRef100_P37531Bacillus subtilisYaaHsubtilis ]22Hypothetical protein yaaI [ BacillusUniRef100_P37532Bacillus subtilisYaaIsubtilis ]23YaaJ24DnaX25Hypothetical UPF0133 protein yaaKUniRef100_P24281Bacillus subtilisYaaK[ Bacillus subtilis ]26Recombination protein recR [ BacillusUniRef100_P24277Bacillus subtilisRecRsubtilis ]27Hypothetical protein yaaL [ BacillusUniRef100_P37533Bacillus subtilissubtilis ]28Sigma-K factor processing regulatoryUniRef100_P24282Bacillus subtilisprotein BOFA [ Bacillus subtilis ]29CsfB protein [ Bacillus subtilis ]UniRef100_P37534Bacillus subtilis30XpaC protein [ Bacillus subtilis ]UniRef100_P37467Bacillus subtilisXpaC31Hypothetical protein yaaN [ BacillusUniRef100_P37535Bacillus subtilisYaaNsubtilis ]32YaaO33Thymidylate kinase [ Bacillus subtilis ]UniRef100_P37537Bacillus subtilisTmk34Hypothetical protein yaaQ [ BacillusUniRef100_P37538Bacillus subtilisYaaQsubtilis ]3536DNA polymerase III, delta' subunitUniRef100_P37540Bacillus subtilisHolB[ Bacillus subtilis ]37Hypothetical protein yaaT [ BacillusUniRef100_P37541Bacillus subtilisYaaTsubtilis ]38Hypothetical protein yabA [ BacillusUniRef100_P37542Bacillus subtilisYabAsubtilis ]39Hypothetical protein yabB [ BacillusUniRef100_P37543Bacillus subtilisYabBsubtilis ]40Hypothetical UPF0213 protein yazAUniRef100_O31414Bacillus subtilis[ Bacillus subtilis ]41Hypothetical UPF0011 protein yabCUniRef100_P37544Bacillus subtilisYabC[ Bacillus subtilis ]42Transition state regulatory protein abrBUniRef100_P08874Bacillus subtilis[ Bacillus subtilis ]43Methionyl-tRNA synthetase [ BacillusUniRef100_P37465Bacillus subtilisMetSsubtilis ]44Putative deoxyribonuclease yabDUniRef100_P37545Bacillus subtilisYabD[ Bacillus subtilis ]45YabE46Hypothetical protein yabF [ BacillusUniRef100_P37547Bacillus subtilisRnmVsubtilis ]47Dimethyladenosine transferase (ECUniRef100_P37468Bacillus subtilisKsgA2.1.1.—) (S-adenosylmethionine-6-N′,N′-adenosyl(rRNA)dimethyltransferase) [ Bacillus subtilis ]48Hypothetical protein yabG [ BacillusUniRef100_P37548Bacillus subtilisYabGsubtilis ]49Veg protein [ Bacillus subtilis ]UniRef100_P37466Bacillus subtilis50SspF protein [ Bacillus subtilis ]UniRef100_P37549Bacillus subtilis51IspE52Pur operon repressor [ Bacillus subtilis ]UniRef100_P37551Bacillus subtilisPurR53UPF0076 protein yabJ [ BacillusUniRef100_P37552Bacillus subtilisYabJsubtilis ]54Stage V sporulation protein G [ BacillusUniRef100_P28015Bacillus subtilissubtilis ]55Bifunctional gcaD protein (TMS protein)UniRef100_P14192Includes: UDP-GcaD[Includes: UDP-N-acetylglucosamineN-pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamineacetylglucosamine-1-phosphatepyrophosphorylaseuridyltransferase); Glucosamine-1-(EC 2.7.7.23)phosphate N-acetyltransferase (EC(N-2.3.1.157)] [ Bacillus subtilis ]acetylglucosamine-1-phosphateuridyltransferase);Glucosamine-1-phosphate N-acetyltransferase(EC 2.3.1.157)56Ribose-phosphate pyrophosphokinaseUniRef100_P14193Bacillus subtilisPrs[ Bacillus subtilis ]57General stress protein ctc [ BacillusUniRef100_P14194Bacillus subtilisCtcsubtilis ]58Peptidyl-tRNA hydrolase [ BacillusUniRef100_P37470Bacillus subtilisSpoVCsubtilis ]59Hypothetical protein yabK [ BacillusUniRef100_P37553Bacillus subtilissubtilis ]60Transcription-repair coupling factorUniRef100_P37474Bacillus subtilisMfd[ Bacillus subtilis ]61Stage V sporulation protein T [ BacillusUniRef100_P37554Bacillus subtilisSpoVTsubtilis ]62Hypothetical protein yabM [ BacillusUniRef100_P37555Bacillus subtilisYabMsubtilis ]63Hypothetical protein yabN [ BacillusUniRef100_P37556Bacillus subtilisYabNsubtilis ]64Hypothetical protein yabO [ BacillusUniRef100_P37557Bacillus subtilissubtilis ]65Hypothetical protein yabP [ BacillusUniRef100_P37558Bacillus subtilisYabPsubtilis ]66Hypothetical protein yabQ [ BacillusUniRef100_P37559Bacillus subtilisYabQsubtilis ]67Cell division protein divlC [ BacillusUniRef100_P37471Bacillus subtilisDivlCsubtilis ]68Hypothetical protein yabR [ BacillusUniRef100_P37560Bacillus subtilisYabRsubtilis ]69Stage II sporulation protein E [ BacillusUniRef100_P37475Bacillus subtilisSpoIIEsubtilis ]70Hypothetical protein yabS [ BacillusUniRef100_P37561Bacillus subtilisYabSsubtilis ]71Probable serine/threonine-proteinUniRef100_P37562Bacillus subtilisYabTkinase yabT [ Bacillus subtilis ]72Hypothetical UPF0072 protein yacAUniRef100_P37563Bacillus subtilisYacA[ Bacillus subtilis ]73Hypoxanthine-guanineUniRef100_P37472Bacillus subtilisHprTphosphoribosyltransferase [ Bacillussubtilis ]74Cell division protein ftsH homologUniRef100_P37476Bacillus subtilisFtsH[ Bacillus subtilis ]75Putative 32 kDa replication proteinUniRef100_Q9F985BacillusYacB[ Bacillus stearothermophilus ]stearothermophilus7633 kDa chaperonin [ Bacillus subtilis ]UniRef100_P37565Bacillus subtilisYacC77YacD78CysK79Para-aminobenzoate synthaseUniRef100_P28820Bacillus subtilisPabBcomponent I [ Bacillus subtilis ]80Para-aminobenzoate/anthranilateUniRef100_P28819Includes: Para-PabAsynthase glutamine amidotransferaseaminobenzoatecomponent II [Includes: Para-synthaseaminobenzoate synthase glutamineglutamineamidotransferase component II (ECamidotransferase6.3.5.8) (ADC synthase); Anthranilatecomponent IIsynthase component II (EC 4.1.3.27)](EC 6.3.5.8)[ Bacillus subtil(ADC synthase);Anthranilatesynthasecomponent II(EC 4.1.3.27)81Aminodeoxychorismate lyase [ BacillusUniRef100_P28821Bacillus subtilisPabCsubtilis ]82Dihydropteroate synthase [ BacillusUniRef100_P28822Bacillus subtilisSuIsubtilis ]83Dihydroneopterin aldolase [ BacillusUniRef100_P28823Bacillus subtilisFolBsubtilis ]842-amino-4-hydroxy-6-UniRef100_P29252Bacillus subtilisFolKhydroxymethyldihydropteridinepyrophosphokinase [ Bacillus subtilis ]85YazB protein [ Bacillus subtilis ]UniRef100_O31417Bacillus subtilis86Probable tRNA-dihydrouridineUniRef100_P37567Bacillus subtilisYacFsynthase 1 [ Bacillus subtilis ]87Lysyl-tRNA synthetase [ BacillusUniRef100_P37477Bacillus subtilisLysSsubtilis ]88Transcriptional regulator ctsR [ BacillusUniRef100_P37568Bacillus subtilisCtsRsubtilis ]89Hypothetical protein yacH [ BacillusUniRef100_P37569Bacillus subtilisMcsAsubtilis ]90Hypothetical ATP: guanidoUniRef100_P37570Bacillus subtilisMcsBphosphotransferase yacl [ Bacillussubtilis ]91Negative regulator of geneticUniRef100_P37571Bacillus subtilisClpCcompetence clpC/mecB [ Bacillussubtilis ]92RadA93Hypothetical protein yacK [ BacillusUniRef100_P37573Bacillus subtilisYacKsubtilis ]94Hypothetical protein yacL [ BacillusUniRef100_Q06754Bacillus subtilisYacLsubtilis ]952-C-methyl-D-erythritol 4-phosphateUniRef100_Q06755Bacillus subtilisYacMcytidylyltransferase [ Bacillus subtilis ]962-C-methyl-D-erythritol 2,4-UniRef100_Q06756Bacillus subtilisYacNcyclodiphosphate synthase [ Bacillussubtilis ]97Glutamyl-tRNA synthetase [ BacillusUniRef100_P22250Bacillus subtilisGltXsubtilis ]98Serine acetyltransferase [ BacillusUniRef100_Q06750Bacillus subtilisCysEsubtilis ]99Cysteinyl-tRNA synthetase [ BacillusUniRef100_Q06752Bacillus subtilisCysSsubtilis ]100YazC protein [ Bacillus subtilis ]UniRef100_O31418Bacillus subtilisYazC101Hypothetical tRNA/rRNAUniRef100_Q06753Bacillus subtilisYacOmethyltransferase yacO [ Bacillussubtilis ]102Hypothetical protein yacP [ BacillusUniRef100_P37574Bacillus subtilisYacPsubtilis ]103RNA polymerase sigma-H factorUniRef100_P17869Bacillus subtilisSigH[ Bacillus subtilis ]104Preprotein translocase secE subunitUniRef100_Q06799Bacillus subtilis[ Bacillus subtilis ]105NusG10650S ribosomal protein L11 [ BacillusUniRef100_Q06796Bacillus subtilisRplKsubtilis ]10750S ribosomal protein L1 [ BacillusUniRef100_Q06797Bacillus subtilisRplAsubtilis ]10850S ribosomal protein L10 [ BacillusUniRef100_P42923Bacillus subtilisRplJsubtilis ]10950S ribosomal protein L7/L12 [ BacillusUniRef100_P02394Bacillus subtilisRplLsubtilis ]110Hypothetical protein ybxB [ BacillusUniRef100_P37872Bacillus subtilisYbxBsubtilis ]111DNA-directed RNA polymerase betaUniRef100_P37870Bacillus subtilisRpoBchain [ Bacillus subtilis ]112DNA-directed RNA polymerase beta′UniRef100_P37871Bacillus subtilisRpoCchain [ Bacillus subtilis ]113Putative ribosomal protein L7Ae-likeUniRef100_P46350Bacillus subtilis[ Bacillus subtilis ]11430S ribosomal protein S12 [ BacillusUniRef100_P21472Bacillus subtilisRpsLsubtilis ]11530S ribosomal protein S7 [ BacillusUniRef100_P21469Bacillus subtilisRpsGsubtilis ]116Elongation factor G [ Bacillus subtilis ]UniRef100_P80868Bacillus subtilisFusA117Elongation factor Tu [ Bacillus subtilis ]UniRef100_P33166Bacillus subtilisTufA11830S ribosomal protein S10 [ BacillusUniRef100_Q9Z9L5BacillusRpsJhalodurans ]halodurans11950S ribosomal protein L3 [ BacillusUniRef100_P42920Bacillus subtilisRplCsubtilis ]12050S ribosomal protein L4 [ BacillusUniRef100_P42921Bacillus subtilisRplDsubtilis ]12150S ribosomal protein L23 [ BacillusUniRef100_P42924Bacillus subtilissubtilis ]12250S ribosomal protein L2 [ BacillusUniRef100_P42919Bacillus subtilisRplBsubtilis ]12330S ribosomal protein S19 [ BacillusUniRef100_P21476Bacillus subtilissubtilis ]12450S ribosomal protein L22 [ BacillusUniRef100_P42060Bacillus subtilisRplVsubtilis ]12530S ribosomal protein S3 [ BacillusUniRef100_P21465Bacillus subtilisRpsCsubtilis ]12650S ribosomal protein L16 [ BacillusUniRef100_P14577Bacillus subtilisRplPsubtilis ]12750S ribosomal protein L29 [ BacillusUniRef100_P12873Bacillus subtilissubtilis ]12830S ribosomal protein S17 [ BacillusUniRef100_P12874Bacillus subtilissubtilis ]12913050S ribosomal protein L24 [ BacillusUniRef100_P12876Bacillus subtilisRplXsubtilis ]13150S ribosomal protein L5 [ BacillusUniRef100_P12877Bacillus subtilisRplEsubtilis ]132Ribosomal protein S14 [ Bacillus cereusUniRef100_Q63H77Bacillus cereus ZKZK]13330S ribosomal protein S8 [ BacillusUniRef100_P12879Bacillus subtilisRpsHsubtilis ]13450S ribosomal protein L6 [ BacillusUniRef100_P46898Bacillus subtilisRplFsubtilis ]13550S ribosomal protein L18 [ BacillusUniRef100_P46899Bacillus subtilisRplRsubtilis ]13630S ribosomal protein S5 [ BacillusUniRef100_P21467Bacillus subtilisRpsEsubtilis ]13750S ribosomal protein L30 [ BacillusUniRef100_P19947Bacillus subtilissubtilis ]13850S ribosomal protein L15 [ BacillusUniRef100_P19946Bacillus subtilisRplOsubtilis ]139SecY140Adenylate kinase [ Bacillus subtilis ]UniRef100_P16304Bacillus subtilisAdk141Methionine aminopeptidase [ BacillusUniRef100_P19994Bacillus subtilisMapsubtilis ]142C-125 initiation factor IF-I, RNAUniRef100_O50629Bacillus haloduranspolymerase alpha subunit andribosomal proteins, partial andcomplete cds [ Bacillus halodurans ]143Translation initiation factor IF-1UniRef100_P20458Bacillus subtilis[ Bacillus subtilis ]144145RpsM14630S ribosomal protein S11 [ BacillusUniRef100_P04969Bacillus subtilisRpsKsubtilis ]147DNA-directed RNA polymerase alphaUniRef100_P20429Bacillus subtilisRpoAchain [ Bacillus subtilis ]14850S ribosomal protein L17 [ BacillusUniRef100_P20277Bacillus subtilisRplQsubtilis ]149Hypothetical ABC transporter ATP-UniRef100_P40735Bacillus subtilisYbxAbinding protein ybxA [ Bacillus subtilis ]150Hypothetical protein orf5 [ BacillusUniRef100_P70970Bacillus subtilisYbaEsubtilis ]151YbaF protein [ Bacillus subtilis ]UniRef100_P70972Bacillus subtilisYbaF152tRNA pseudouridine synthase AUniRef100_P70973Bacillus subtilisTruA[ Bacillus subtilis ]15350S ribosomal protein L13 [ BacillusUniRef100_P70974Bacillus subtilisRplMsubtilis ]15430S ribosomal protein S9 [ BacillusUniRef100_P21470Bacillus subtilisRpsIsubtilis ]155Hypothetical protein [ Bacillus cereus ]UniRef100_Q737T6Bacillus cereusYizA156Hypothetical protein ybaK [ BacillusUniRef100_P50862Bacillus subtilisYbaKsubtilis ]157Germination-specific N-UniRef100_P50864Bacillus subtilisCwlDacetylmuramoyl-L-alanine amidase[ Bacillus subtilis ]158YbaL159Spore germination protein gerDUniRef100_P16450Bacillus subtilisGerDprecursor [ Bacillus subtilis ]160KinB signaling pathway activationUniRef100_P16449Bacillus subtilisKbaAprotein [ Bacillus subtilis ]161Hypothetical protein ybaN precursorUniRef100_P50865Bacillus subtilisYbaN[ Bacillus subtilis ]162Penicillin-binding protein [ BacillusUniRef100_O31773Bacillus subtilisPbpXsubtilis ]163164Hypothetical protein ybaS [ BacillusUniRef100_P55190Bacillus subtilisYbaSsubtilis ]165Hypothetical protein yxaJ [ BacillusUniRef100_P42109Bacillus subtilisYxaJsubtilis ]166Phenazine biosynthetic proteinUniRef100_Q9HHG6HalobacteriumYfhB[ Halobacterium sp.]sp.167Hypothetical protein ybbC precursorUniRef100_P40407Bacillus subtilisYbbC[ Bacillus subtilis ]168Hypothetical lipoprotein ybbD precursorUniRef100_P40406Bacillus subtilisYbbD[ Bacillus subtilis ]169Hypothetical UPF0214 protein ybbEUniRef100_O05213Bacillus subtilisYbbEprecursor [ Bacillus subtilis ]170YbbF protein [ Bacillus subtilis ]UniRef100_Q797S1Bacillus subtilisYbbF171Putative HTH-type transcriptionalUniRef100_Q45581Bacillus subtilisYbbHregulator ybbH [ Bacillus subtilis ]172Hypothetical protein ybbI [ BacillusUniRef100_Q45582Bacillus subtilisYbbIsubtilis ]173Hypothetical protein ybbK [ BacillusUniRef100_Q45584Bacillus subtilisYbbKsubtilis ]174Arginase [ Bacillus caldovelox ]UniRef100_P53608BacillusRocFcaldovelox175RNA polymerase sigma factor sigWUniRef100_Q45585Bacillus subtilisSigW[ Bacillus subtilis ]176YbbM protein [ Bacillus subtilis ]UniRef100_Q45588Bacillus subtilisYbbM177YbbP protein [ Bacillus subtilis ]UniRef100_Q45589Bacillus subtilisYbbP178YbbR protein [ Bacillus subtilis ]UniRef100_O34659Bacillus subtilisYbbR179YbbT protein [ Bacillus subtilis ]UniRef100_O34824Bacillus subtilisYbbT180Glucosamine--fructose-6-phosphateUniRef100_P39754isomerizingGlmSaminotransferase [isomerizing][ Bacillus subtilis ]181182Hypothetical protein [ BacillusUniRef100_Q6HH47Bacillus thuringiensisthuringiensis ]183UPI00003CBF92 UniRef100 entryUniRef100_UPI00003CBF92YtrB184Transcriptional regulator [ BacillusUniRef100_Q9KF35BacillusYtrAhalodurans ]halodurans185186YbcL protein [ Bacillus subtilis ]UniRef100_O34663Bacillus subtilisYbcL187BH0186 protein [ Bacillus halodurans ]UniRef100_Q9KGB8Bacillus halodurans188ABC transporter [ Bacillus halodurans ]UniRef100_Q9KEY6BacillusYvcChalodurans189Hypothetical protein ywbO [ BacillusUniRef100_P39598Bacillus subtilisYwbOsubtilis ]190191BH0695 protein [ Bacillus halodurans ]UniRef100_Q9KF04Bacillus halodurans192Aminoglycoside 6-adenylyltranseraseUniRef100_Q6V4U6EnterococcusAadK[ Enterococcus faecium ]faecium193Hypothetical conserved proteinUniRef100_Q8ERX2Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]194YfnB [ Bacillus subtilis ]UniRef100_O06480Bacillus subtilisYfnB195Hypothetical transport protein ybxGUniRef100_P54425Bacillus subtilisYbxG[ Bacillus subtilis ]196Mg(2+)/citrate complex secondaryUniRef100_P55069Bacillus subtilisCitMtransporter [ Bacillus subtilis ]197YflP protein [ Bacillus subtilis ]UniRef100_O034439Bacillus subtilisYflP198CitT199Sensor protein citS [ Bacillus subtilis ]UniRef100_O34427Bacillus subtilisCitS200Transcriptional regulatorUniRef100_Q8RB37ThermoanaerobacterYwfK[ Thermoanaerobacter tengcongensis ]tengcongensis201Complete genome; segment 8/17UniRef100_Q7N4W7PhotorhabdusYwfE[ Photorhabdus luminescens ]luminescens202Multidrug resistance protein B [ BacillusUniRef100_Q81AF0Bacillus cereusYqjVcereus ]203Sigma-G-dependent sporulationUniRef100_P54379Bacillus subtilisspecific SASP protein [ Bacillus subtilis ]204Hypothetical protein ybxH [ BacillusUniRef100_P54426Bacillus subtilissubtilis ]205YbyB protein [ Bacillus subtilis ]UniRef100_O31441Bacillus subtilis206Hypothetical protein yyaL [ BacillusUniRef100_P37512Bacillus subtilisYyaLsubtilis ]207Hypothetical protein yyaO [ BacillusUniRef100_P37509Bacillus subtilissubtilis ]208Threonyl-tRNA synthetase 2 [ BacillusUniRef100_P18256Bacillus subtilisThrZsubtilis ]209210YttB211Hypothetical protein [ Acinetobacter sp.]UniRef100_Q6FDN0Acinetobacter sp.212Hypothetical UPF0053 protein yrkAUniRef100_P54428Bacillus subtilisYrkA[ Bacillus subtilis ]213YdeG214YbaJ215216YqeW217YubF protein [ Bacillus subtilis ]UniRef100_O32082Bacillus subtilis218YbfF219Hypothetical protein [BacteroidesUniRef100_Q64UG6Bacteroides fragilisfragilis ]220Hypothetical transport protein ybhFUniRef100_O31448Bacillus subtilisYbfH[ Bacillus subtilis ]221YbfI protein [ Bacillus subtilis ]UniRef100_O31449Bacillus subtilisYbfI222223UPI00003CBC98 UniRef100 entryUniRef100_UPI00003CBC98224225Oxidoreductase [ Lactococcus lactis ]UniRef100_Q9CFC5Lactococcus lactis226Methyl-accepting chemotaxis proteinUniRef100_Q8EST3OceanobacillusYvaQ[ Oceanobacillus iheyensis ]iheyensis227D-xylose-binding proteinUniRef100_O68456ThermoanaerobacterRbsB[ Thermoanaerobacter ethanolicus ]ethanolicus228Hypothetical protein OB0544UniRef100_Q8ESS4OceanobacillusYomI[ Oceanobacillus iheyensis ]iheyensis229Hypothetical protein [ Bacillus cereus ]UniRef100_Q81IR4Bacillus cereus230Streptogramin B lactonaseUniRef100_O87275Staphylococcus cohnii[ Staphylococcus cohnii ]231Hypothetical protein ycbP [ BacillusUniRef100_P42248Bacillus subtilisYcbPsubtilis ]232YbgF protein [ Bacillus subtilis ]UniRef100_O31462Bacillus subtilisYbgF233YbgG protein [ Bacillus subtilis ]UniRef100_O31463Bacillus subtilisYbgG234235PTS system, n-acetylglucosamine-UniRef100_Q9KF24BacillusNagPspecific enzyme II, ABC componenthalodurans[ Bacillus halodurans ]236UPI00003CBDBC UniRef100 entryUniRef100_UPI00003CBDBCMta237Hypothetical protein [ BacillusUniRef100_Q6HIW0BacillusYdfSthuringiensis ]thuringiensis238Carbonic anhydrase [ MethanosarcinaUniRef100_Q8PSJ1MethanosarcinaYtoAmazei ]mazei239Hypothetical protein yjgA [ BacillusUniRef100_Q6HHU2BacillusYjgAthuringiensis ]thuringiensis240Amino acid carrier protein [ BacillusUniRef100_Q6HGU4BacillusYbgHthuringiensis ]thuringiensis241Probable glutaminase ybgJ [ BacillusUniRef100_O31465Bacillus subtilisYbgJsubtilis ]242Two-component sensor kinase ycbAUniRef100_Q81BN8Bacillus cereusYcbA[ Bacillus cereus ]243Hypothetical sensory transductionUniRef100_P40759Bacillus subtilisYcbBprotein ycbB [ Bacillus subtilis ]244YoaA245YbxI246247Beta-lactamase precursor (EC 3.5.2.6)UniRef100_P00808Contains: LargePenP(Penicillinase) [Contains: Largeexopenicillinase;exopenicillinase; SmallSmallexopenicillinase] [ Bacillus licheniformis ]exopenicillinase248Alkaline phosphatase D precursorUniRef100_P42251Bacillus subtilisPhoD[ Bacillus subtilis ]249250Hypothetical protein ycbT [ BacillusUniRef100_P42252Bacillus subtilisTatCDsubtilis ]251YcbC252Probable aldehyde dehydrogenaseUniRef100_P42236Bacillus subtilisYcbDycbD [ Bacillus subtilis ]253Probable glucarate transporter [ BacillusUniRef100_P42237Bacillus subtilisYcbEsubtilis ]254Probable glucarate dehydrataseUniRef100_P42238Bacillus subtilisYcbF[ Bacillus subtilis ]255Hypothetical transcriptional regulatorUniRef100_P42239Bacillus subtilisYcbGycbG [ Bacillus subtilis ]256Probable D-galactarate dehydrataseUniRef100_P42240Bacillus subtilisYcbH[ Bacillus subtilis ]257Hypothetical sensory transductionUniRef100_P42244Bacillus subtilisYcbLprotein ycbL [ Bacillus subtilis ]258Sensor histidine kinase [ BacillusUniRef100_Q633Q6Bacillus cereus ZKcereus ZK]259Hypothetical ABC transporter ATP-UniRef100_P42246Bacillus subtilisYcbNbinding protein ycbN [ Bacillus subtilis ]260Hypothetical protein ycbO [ BacillusUniRef100_P42247Bacillus subtilisYcbOsubtilis ]261YcbO262YfnK [ Bacillus subtilis ]UniRef100_O06490Bacillus subtilisYetN263Hypothetical protein ybdO [ BacillusUniRef100_O31437Bacillus subtilisYbdOsubtilis ]264Hypothetical protein ycbJ [ BacillusUniRef100_P42242Bacillus subtilisYcbJsubtilis ]265Hypothetical protein ywhA [ BacillusUniRef100_P70993Bacillus subtilisYwhAsubtilis ]266YdaB267AII0778 protein [ Anabaena sp.]UniRef100 Q8YYR8Anabaena sp.268BH1298 protein [ Bacillus halodurans ]UniRef100_Q9KDB5BacillusYbdNhalodurans269BH1299 protein [ Bacillus halodurans ]UniRef100_Q9KDB4Bacillus halodurans270Transcriptional activator tipA, putativeUniRef100_Q81XN3BacillusMta[ Bacillus anthracis ]anthracis271272Transcriptional regulator, PadR familyUniRef100_Q81BZ0Bacillus cereus[ Bacillus cereus ]273Hypothetical protein [ Bacillus cereusUniRef100_Q639U7Bacillus cereus ZKZK]274Tryptophan RNA-binding attenuatorUniRef100_O31466Bacillus subtilisprotein-inhibitory protein [ Bacillussubtilis ]275Hypothetical transport protein ycbKUniRef100_P42243Bacillus subtilisYcbK[ Bacillus subtilis ]276YczC277Hypothetical protein yccF [ BacillusUniRef100_O34478Bacillus subtilisYccFsubtilis ]278SpaF [ Bacillus subtilis ]UniRef100_Q45404Bacillus subtilisYhcH279SpaE [ Bacillus subtilis ]UniRef100_O52853Bacillus subtilis280Putative SpaG [ Bacillus subtilis ]UniRef100_Q93GG9Bacillus subtilis281Subtilin biosynthesis regulatory proteinUniRef100_P33112Bacillus subtilisYycFspaR [ Bacillus subtilis ]282Putative histidine kinase [ BacillusUniRef100_Q93GG7Bacillus subtilisResEsubtilis ]283UPI00003CA401 UniRef100 entryUniRef100_UPI00003CA401YtlI284YusQ protein [ Bacillus subtilis ]UniRef100_O32183Bacillus subtilisYusQ285Complete genome; segment 6/17UniRef100_Q7N6K9PhotorhabdusYusR[ Photorhabdus luminescens ]luminescens286Methyltransferase [ BacillusUniRef100_Q6HK82Bacillus thuringiensisthuringiensis ]287Hypothetical lipoprotein ycdA precursorUniRef100_O34538Bacillus subtilisYcdA[ Bacillus subtilis ]288UPI00003CB481 UniRef100 entryUniRef100_UPI00003CB481YcgA289Hypothetical conserved proteinUniRef100_Q8ESQ2OceanobacillusYtnL[ Oceanobacillus iheyensis ]iheyensis290Hypothetical conserved proteinUniRef100_Q8ET83OceanobacillusYvbK[ Oceanobacillus iheyensis ]iheyensis291GatA292Oligoendopeptidase F, putativeUniRef100_Q81JJ8BacillusYjbG[ Bacillus anthracis ]anthracis293294UPI00003CC42D UniRef100 entryUniRef100_UPI00003CC42DPbpX295Hypothetical protein ysfD [ BacillusUniRef100_P94534Bacillus subtilisYsfDsubtilis ]296Hypothetical protein ysfC [ BacillusUniRef100_P94535Bacillus subtilisYsfCsubtilis ]297PTS system, cellobiose-specificUniRef100_Q9KEE3Bacillus haloduransenzyme II, B component [ Bacillushalodurans ]298PTS system, cellobiose-specificUniRef100_Q9KEE2BacillusLicAenzyme II, A component [ Bacillushaloduranshalodurans ]299PTS system, cellobiose-specificUniRef100_Q8EP43OceanobacillusYwbAenzyme II, C componentiheyensis[ Oceanobacillus iheyensis ]3006-phospho-beta-glucosidase [ BacillusUniRef100_Q9KEE0BacillusLicHhalodurans ]halodurans301Transcriptional regulator [ BacillusUniRef100_Q9KED8BacillusYbgAhalodurans ]halodurans302303YvbX304Chitinase precursor [ StreptomycesUniRef100_Q9L3E8Streptomyces olivaceoviridisolivaceoviridis ]305Extracellular metalloprotease precursorUniRef100_P39790Bacillus subtilisMpr[ Bacillus subtilis ]306Glucose 1-dehydrogenase II [ BacillusUniRef100_P80869Bacillus subtilisYcdFsubtilis ]307Hypothetical protein OB0244UniRef100_Q8ETL6Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]308Hypothetical protein ycdC [ BacillusUniRef100_O34772Bacillus subtilisYcdCsubtilis ]309310Cell wall hydrolase cwlJ [ BacillusUniRef100_P42249Bacillus subtilisCwlJsubtilis ]311Hypothetical protein yceB [ BacillusUniRef100_O34504Bacillus subtilisYceBsubtilis ]312Hypothetical protein yvcE [ BacillusUniRef100_P40767Bacillus subtilisYvcEsubtilis ]313ABC transporter, permease [ BacillusUniRef100_Q637N2Bacillus cereusYfiMcereus ZK]ZK314ABC transporter, ATP-binding proteinUniRef100_Q733P8Bacillus cereusYfiL[ Bacillus cereus ]315UPI00003CC482 UniRef100 entryUniRef100_UPI00003CC482YsiA316Hypothetical protein OB3113UniRef100_Q8ELV2Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]317BH3953 protein [ Bacillus halodurans ]UniRef100_Q9K5Y3Bacillus halodurans318BH3951 protein [ Bacillus halodurans ]UniRef100_Q9K5Y4BacillusPadRhalodurans319Stress response protein SCP2 [ BacillusUniRef100_P81100Bacillus subtilisYceCsubtilis ]320General stress protein 16U [ BacillusUniRef100_P80875Bacillus subtilisYceDsubtilis ]321Hypothetical protein yceE [ BacillusUniRef100_O34384Bacillus subtilisYceEsubtilis ]322Hypothetical protein yceF [ BacillusUniRef100_O34447Bacillus subtilisYceFsubtilis ]323Hypothetical protein [ Bacillus cereus ]UniRef100_Q72YD0Bacillus cereus324YceG [ Bacillus subtilis ]UniRef100_O34809Bacillus subtilisYceG325Hypothetical protein yceH [ BacillusUniRef100_O34833Bacillus subtilisYceHsubtilis ]326UPI00003CB694 UniRef100 entryUniRef100_UPI00003CB694CcdA327Hypothetical conserved proteinUniRef100_Q8ELB4OceanobacillusYdiL[ Oceanobacillus iheyensis ]iheyensis328Mta329Nitrate transporter [ Bacillus subtilis ]UniRef100_P42432Bacillus subtilisNasA330L-lactate dehydrogenase [ BacillusUniRef100_P13714Bacillus subtilisLdhsubtilis ]331L-lactate permease [ Bacillus subtilis ]UniRef100_P55910Bacillus subtilisLctP332YcgF protein [ Bacillus subtilis ]UniRef100_P94381Bacillus subtilisYcgF333Homologue of aromatic amino acidsUniRef100_P94383Bacillus subtilisYcgHtransport protein of E. coli [ Bacillussubtilis ]334NH(3)-dependent NAD(+) synthetaseUniRef100_P08164Bacillus subtilisNadE[ Bacillus subtilis ]335Shikimate kinase [ Bacillus subtilis ]UniRef100_P37944Bacillus subtilisAroK336YcgL protein [ Bacillus subtilis ]UniRef100_P94389Bacillus subtilisYcgL337Proline dehydrogenase [ BacillusUniRef100_Q8RL79Bacillus subtilisYcgMsubtilis ]3381-pyrroline-5-carboxylateUniRef100_P94391Bacillus subtilisYcgNdehydrogenase 2 [ Bacillus subtilis ]339Homologue of proline permease of E. coliUniRef100_P94392Bacillus subtilisYcgO[ Bacillus subtilis ]340Hypothetical protein ycgP [ BacillusUniRef100_P94393Bacillus subtilisYcgPsubtilis ]341YcgQ protein [ Bacillus subtilis ]UniRef100_P94394Bacillus subtilisYcgQ342YcgR343Cephalosporin-C deacetylase [ BacillusUniRef100_Q59233Bacillus subtilisCahsubtilis ]344Transcriptional regulator [ BacillusUniRef100_Q9KF41BacillusYdgGhalodurans ]halodurans345346347Probable amino-acid ABC transporterUniRef100_P42399Bacillus subtilisYckApermease protein yckA [ Bacillussubtilis ]348Probable ABC transporter extracellularUniRef100_P42400Bacillus subtilisYckBbinding protein yckB precursor [ Bacillussubtilis ]349NAD(P)H dehydrogenase (Quinone);UniRef100_Q63FG6Bacillus cereusYwrOpossible modulator of drug activity BZK[Bacillus cereus ZK]350BH0315 protein [ Bacillus halodurans ]UniRef100_Q9KG01Bacillus halodurans351Probable beta-glucosidase [ BacillusUniRef100_P42403Bacillus subtilisYckEsubtilis ]352Nin [ Bacillus amyloliquefaciens ]UniRef100_Q70KK3BacillusNinamyloliquefaciens353DNA-entry nuclease [ Bacillus subtilis ]UniRef100_P12667Bacillus subtilisNucA354YbdM355Methyl-accepting chemotaxis proteinUniRef100_P39209Bacillus subtilisTlpCtlpC [ Bacillus subtilis ]356Hypothetical protein yqcG [ BacillusUniRef100_P45942Bacillus subtilisYqcGsubtilis ]357Hydantoin utilization protein AUniRef100_Q7WCS3Bordetella bronchiseptica[ Bordetella bronchiseptica ]358Hydantoin utilization protein BUniRef100_Q987J6Rhizobium loti[ Rhizobium loti ]359UPI000027D233 UniRef100 entryUniRef100_UPI000027D233YvfK360358aa long hypothetical transporterUniRef100_Q9YB65AeropyrumMsmXATP-binding protein [ Aeropyrum pernix ]pernix361AttA2-like ABC transporter, permeaseUniRef100_Q92ZH0RhizobiumYesPprotein [ Rhizobium meliloti ]meliloti362YurM363SrfAA364SrfAB365SrfAC366SrfAD367YcxC368YcxD3694′-phosphopantetheinyl transferase sfpUniRef100_P39135Bacillus subtilisSfp[ Bacillus subtilis ]370Predicted esterase of alpha/betaUniRef100_Q97HP7ClostridiumYbbAhydrolase superfamily, YBBA B. subtilisacetobutylicumortholog [ Clostridium acetobutylicum ]371Transcriptional regulator [ ClostridiumUniRef100_Q97LX8ClostridiumYdeEacetobutylicum ]acetobutylicum372YczE [ Bacillus subtilis ]UniRef100_Q9F4F8Bacillus subtilisYczE373Hypothetical protein [ SymbiobacteriumUniRef100_Q67MZ7Symbiobacteriumthermophilum ]thermophilum374YfiL375376Hypothetical protein [ SymbiobacteriumUniRef100_Q67MZ9Symbiobacteriumthermophilum ]thermophilum377378379Methyl-accepting chemotaxis proteinUniRef100_Q6HJV7BacillusTlpB[ Bacillus thuringiensis ]thuringiensis380YckI [ Bacillus subtilis ]UniRef100_Q9F4F9Bacillus subtilisYckI381YckJ [ Bacillus subtilis ]UniRef100_Q9F4G0Bacillus subtilisYckJ382YckK383RocR384Ornithine aminotransferase [ BacillusUniRef100_P38021Bacillus subtilisRocDsubtilis ]385Amino-acid permease rocE [ BacillusUniRef100_P39137Bacillus subtilisRocEsubtilis ]386Arginase [ Bacillus subtilis ]UniRef100_P39138Bacillus subtilisRocF387Homologue of als operon regulatoryUniRef100_P94403Bacillus subtilisYclAprotein AlsR of B. subtilis [ Bacillussubtilis ]388Probable aromatic acid decarboxylaseUniRef100_P94404Bacillus subtilisYclB[ Bacillus subtilis ]389Hypothetical protein yclC [ BacillusUniRef100_P94405Bacillus subtilisYclCsubtilis ]390YclD protein [ Bacillus subtilis ]UniRef100_P94406Bacillus subtilisYclD391392393394Hypothetical protein [ BacillusUniRef100_Q6HMQ9Bacillus thuringiensisthuringiensis ]395Hypothetical protein OB2810UniRef100_Q8EMN2Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]396397YxiD398399YxiB400Sugar ABC transporter [ BacillusUniRef100_Q9K7B8BacillusRbsBhalodurans ]halodurans401Two-component sensor histidineUniRef100_Q9K7B9BacillusYesMkinase [ Bacillus halodurans ]halodurans402YesN403Multiple sugar transport systemUniRef100_Q9K7C2BacillusRbsB[ Bacillus halodurans ]halodurans404L-arabinose transport ATP-bindingUniRef100_Q9S472BacillusRbsAprotein araG [ Bacillusstearothermophilusstearothermophilus ]405L-arabinose membrane permeaseUniRef100_Q9S471BacillusRbsC[ Bacillus stearothermophilus ]stearothermophilus406Transporter [ Bacillus halodurans ]UniRef100_Q9K9F3BacillusYbfBhalodurans407YbfA protein [ Bacillus subtilis ]UniRef100_O31443Bacillus subtilisYbfA408Beta-D-galactosidase [ BacillusUniRef100_Q45093BacillusLacAcirculans ]circulans409Phy410Hypothetical transporter yclF [ BacillusUniRef100_P94408Bacillus subtilisYclFsubtilis ]411YclG protein [ Bacillus subtilis ]UniRef100_P94409Bacillus subtilisYclG412413GerKA414Spore germination protein KCUniRef100_P49941Bacillus subtilisGerKCprecursor [ Bacillus subtilis ]415Spore germination protein KB [ BacillusUniRef100_P49940Bacillus subtilisGerKBsubtilis ]416Mta417Hypothetical protein yclH [ BacillusUniRef100_P94411Bacillus subtilisYclHsubtilis ]418Hypothetical protein yclI [ BacillusUniRef100_P94412Bacillus subtilisYclIsubtilis ]419Hypothetical sensory transductionUniRef100_P94413Bacillus subtilisYclJprotein yclJ [ Bacillus subtilis ]420Hypothetical sensor-like histidineUniRef100_P94414Bacillus subtilisYclKkinase yclK [ Bacillus subtilis ]421Methyl-accepting chemotaxis proteinUniRef100_Q9K632BacillusTlpA[ Bacillus halodurans ]halodurans422Probable aspartokinase [ BacillusUniRef100_P94417Bacillus subtilisYclMsubtilis ]423Homologue of ferric anguibactinUniRef100_P94418Bacillus subtilisYclNtransport system permerase proteinFatD of V. anguillarum [ Bacillussubtilis ]424Homologue of ferric anguibactinUniRef100_P94419Bacillus subtilisYclOtransport system permerase proteinFatC of V. anguillarum [ Bacillussubtilis ]425Homologue of iron dicitrate transportUniRef100_P94420Bacillus subtilisYclPATP-binding protein FecE of E. coli[ Bacillus subtilis ]426Ferric anguibactin-binding proteinUniRef100_P94421Bacillus subtilisYclQprecusor FatB of V. anguillarum[ Bacillus subtilis ]427Homologue of multidrug resistanceUniRef100_P94422Bacillus subtilisYcnBprotein B, EmrB, of E. coli [ Bacillussubtilis ]428YcnC protein [ Bacillus subtilis ]UniRef100_P94423Bacillus subtilisYcnC429Hypothetical protein [ Bacillus cereusUniRef100_Q636R0Bacillus cereusYqiQZK]ZK430Hypothetical oxidoreductase ycnDUniRef100_P94424Bacillus subtilisYcnD[ Bacillus subtilis ]431Hypothetical protein ycnE [ BacillusUniRef100_P94425Bacillus subtilissubtilis ]432YczG protein [ Bacillus subtilis ]UniRef100_O31480Bacillus subtilis433Homologue of regulatory protein MocRUniRef100_P94426Bacillus subtilisGabRof R. meliloti [ Bacillus subtilis ]434Probable 4-aminobutyrateUniRef100_P94427Bacillus subtilisGabTaminotransferase (EC 2.6.1.19) ((S)-3-amino-2-methylpropionatetransaminase) [ Bacillus subtilis ]435Cationic amino acid transporterUniRef100_Q8ESX7OceanobacillusYhdG[ Oceanobacillus iheyensis ]iheyensis436Homologue of succinate semialdehydeUniRef100_P94428Bacillus subtilisGabDdehydrogenase GabD of E. coli[ Bacillus subtilis ]437YwfM438439YcnI protein [ Bacillus subtilis ]UniRef100_P94431Bacillus subtilisYcnI440Homologue of copper export proteinUniRef100_P94432Bacillus subtilisYcnJPcoD of E. coli [ Bacillus subtilis ]441YcnK protein [ Bacillus subtilis ]UniRef100_P94433Bacillus subtilisYcnK442Assimilatory nitrate reductase electronUniRef100_P42433Bacillus subtilisNasBtransfer subunit [ Bacillus subtilis ]443Assimilatory nitrate reductase catalyticUniRef100_P42434Bacillus subtilisNasCsubunit [ Bacillus subtilis ]444Nitrite reductase [NAD(P)H] [ BacillusUniRef100_P42435NAD(P)HNasDsubtilis ]445Assimilatory nitrite reductaseUniRef100_P42436NAD(P)HNasE[NAD(P)H] small subunit [ Bacillussubtilis ]446Uroporphyrin-III C-methyltransferaseUniRef100_P42437Bacillus subtilisNasF[ Bacillus subtilis ]447Hypothetical transcriptional regulatorUniRef100_O05494Bacillus subtilisYdhCydhC [ Bacillus subtilis ]448Sodium-dependent transporterUniRef100_Q8ENE3OceanobacillusYflS[ Oceanobacillus iheyensis ]iheyensis449Hypothetical protein ycsD [ BacillusUniRef100_P42961Bacillus subtilissubtilis ]450UPI00003CC424 UniRef100 entryUniRef100_UPI00003CC424451Possible transcriptional antiterminator,UniRef100_Q63A16Bacillus cereusMtlRbglG family [ Bacillus cereus ZK]ZK452Putative sugar-specific PTS componentUniRef100_Q7X1N9Lactococcus raffinolactisEIIB [ Lactococcus raffinolactis ]453SgaT protein [ MannheimiaUniRef100_Q65WA2Mannheimiasucciniciproducens MBEL55E]succiniciproducens MBEL55E454Transketolase, N-terminal subunitUniRef100_Q8E202StreptococcusTkt[ Streptococcus agalactiae ]agalactiae455Putative transketolase [ SalmonellaUniRef100_Q8ZND5SalmonellaDxstyphimurium ]typhimurium456Hypothetical protein ycsE [ BacillusUniRef100_P42962Bacillus subtilisYcsEsubtilis ]457Hypothetical UPF0271 protein ycsFUniRef100_P42963Bacillus subtilisYcsF[ Bacillus subtilis ]458Hypothetical protein ycsG [ BacillusUniRef100_P42964Bacillus subtilisYcsGsubtilis ]459Hypothetical UPF0317 protein ycsIUniRef100_P42966Bacillus subtilisYcsI[ Bacillus subtilis ]460Kinase A inhibitor [ Bacillus subtilis ]UniRef100_P60495Bacillus subtilisKipI461KipI antagonist [ Bacillus subtilis ]UniRef100_Q7WY77Bacillus subtilisKipA462HTH-type transcriptional regulator kipRUniRef100_P42968Bacillus subtilisKipR[ Bacillus subtilis ]463Hypothetical protein ycsK [ BacillusUniRef100_P42969Bacillus subtilisYcsKsubtilis ]464PTS system, mannitol-specific IIABCUniRef100_P42956Bacillus subtilisMtlAcomponent [ Bacillus subtilis ]465Mannitol-1-phosphate 5-UniRef100_P42957Bacillus subtilisMtlDdehydrogenase [ Bacillus subtilis ]466YdaA protein [ Bacillus subtilis ]UniRef100_P96574Bacillus subtilisMtlR467General stress protein 39 [ BacillusUniRef100_P80873Bacillus subtilisYdaDsubtilis ]468Hypothetical protein ydaE [ BacillusUniRef100_P96578Bacillus subtilisYdaEsubtilis ]469Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81U55Bacillus anthracis470General stress protein 26 [ BacillusUniRef100_P80238Bacillus subtilisYdaGsubtilis ]471YdaH protein [ Bacillus subtilis ]UniRef100_P96581Bacillus subtilisYdaH472Lin0463 protein [ Listeria innocua ]UniRef100_Q92EJ6Listeria innocuaYvhJ473YdzA protein [ Bacillus subtilis ]UniRef100_O31485Bacillus subtilis474BH0424 protein [ Bacillus halodurans ]UniRef100_Q9KFQ4Bacillus halodurans475HTH-type transcriptional regulator lrpCUniRef100_P96582Bacillus subtilisLrpC[ Bacillus subtilis ]476PROBABLE DNA TOPOISOMERASEUniRef100_P96583Bacillus subtilisTopBIII [ Bacillus subtilis ]477478479480YdaO481YdaO482YdaP protein [ Bacillus subtilis ]UniRef100_P96591Bacillus subtilisYdaP483484UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC069485IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]486487Similar to ribosomal-protein-serine N-UniRef100_Q99WN5StaphylococcusYdaFacetyltransferase [ Staphylococcusaureusaureus ]488Manganese transport protein mntHUniRef100_P96593Bacillus subtilisMntH[ Bacillus subtilis ]489490AnsB491YojK492YdaT protein [ Bacillus subtilis ]UniRef100_P96595Bacillus subtilisYdaT493Hypothetical protein ydbA [ BacillusUniRef100_P96596Bacillus subtilisYdbAsubtilis ]494Na+/H+ antiporter NhaC [ BacillusUniRef100_Q81FX8Bacillus cereusNhaCcereus ]495YdbB protein [ Bacillus subtilis ]UniRef100_P96597Bacillus subtilisYdbB496Glucose starvation-inducible protein BUniRef100_P26907Bacillus subtilisGsiB[ Bacillus subtilis ]497Hypothetical UPF0118 protein ydbIUniRef100_P96604Bacillus subtilisYdbI[ Bacillus subtilis ]498GltT499YdbJ protein [ Bacillus subtilis ]UniRef100_P96605Bacillus subtilisYdbJ500YdbK protein [ Bacillus subtilis ]UniRef100_P96606Bacillus subtilisYdbK501Hypothetical protein ydbL [ BacillusUniRef100_P96607Bacillus subtilisYdbLsubtilis ]502YdbM protein [ Bacillus subtilis ]UniRef100_P96608Bacillus subtilisYdbM503504505YdbP protein [ Bacillus subtilis ]UniRef100_P96611Bacillus subtilisYdbP506D-alanine--D-alanine ligase [ BacillusUniRef100_P96612Bacillus subtilisDdlsubtilis ]507MurF508Esterase [ Oceanobacillus iheyensis ]UniRef100_Q8ESM0OceanobacillusYvaKiheyensis509YdbR protein [ Bacillus subtilis ]UniRef100_P96614Bacillus subtilisYdbR510YdbS protein [ Bacillus subtilis ]UniRef100_P96615Bacillus subtilisYdbS511YdbT protein [ Bacillus subtilis ]UniRef100_P96616Bacillus subtilisYdbT512YdcA protein [ Bacillus subtilis ]UniRef100_P96617Bacillus subtilisYdcA513YdcC514Alr515516YdcE protein [ Bacillus subtilis ]UniRef100_P96622Bacillus subtilisYdcE517RsbR518RsbS519RsbT520RsbU521RsbV522RsbW523SigB524RsbX525YdcI protein [ Bacillus subtilis ]UniRef100_O31489Bacillus subtilisYdcI526Transcriptional regulator, TetR familyUniRef100_Q6HGY5BacillusYxbF[ Bacillus thuringiensis ]thuringiensis527Lin1189 protein [ Listeria innocua ]UniRef100_Q92CI2Listeria innocuaYdgH528529Protein sprT-like [ Bacillus subtilis ]UniRef100_P96628Bacillus subtilisYdcK530Possible transporter, EamA familyUniRef100_Q638K5Bacillus cereus ZK[ Bacillus cereus ZK]531532Hypothetical protein ORF00034UniRef100_O87235Lactococcus lactis[ Lactococcus lactis ]533Delta5 acyl-lipid desaturase [ BacillusUniRef100_Q81C02Bacillus cereusDescereus ]534Cold shock protein cspC [ BacillusUniRef100_P39158Bacillus subtilissubtilis ]535YogA536Membrane protein, putative [ BacillusUniRef100_Q734Y0Bacillus cereusYyaScereus ]537Transcriptional regulator, MarR familyUniRef100_Q734X9Bacillus cereusYybA[ Bacillus cereus ]538Acetyltransferase, GNAT familyUniRef100_Q734X8Bacillus cereusPaiA[ Bacillus cereus ]539Protease synthase and sporulationUniRef100_Q734X7Bacillus cereusPaiBnegative regulatory protein PAI 2[ Bacillus cereus ]540BH0654 protein [ Bacillus halodurans ]UniRef100_Q9KF33BacillusRocFhalodurans541542YdeO protein [ Bacillus subtilis ]UniRef100_P96672Bacillus subtilisYdeO543Transporter, LysE family [ BacillusUniRef100_Q81D17Bacillus cereusYrhPcereus ]544YwqM545546Permease, putative [ Bacillus anthracis ]UniRef100_Q81QY7BacillusYvqJanthracis547Putative cyclase [ RhodopseudomonasUniRef100_Q6N497Rhodopseudomonas palustrispalustris ]548Hypothetical transport protein ydgFUniRef100_P96704Bacillus subtilisYdgF[ Bacillus subtilis ]549550YknW551RNA polymerase sigma factor sigVUniRef100_O05404Bacillus subtilisSigV[ Bacillus subtilis ]552Putative anti-SigV factor [ BacillusUniRef100_O05403Bacillus subtilisYrhMsubtilis ]553Hypothetical protein yrhL [ BacillusUniRef100_O05402Bacillus subtilisYrhLsubtilis ]554YdgK555YwpD556LytT557Collagen adhesion protein [ BacillusUniRef100_Q630P2Bacillus cereus ZKcereus ZK]558Lin0929 protein [ Listeria innocua ]UniRef100_Q92D88Listeria innocua559560Metabolite transport protein [ BacillusUniRef100_O34718Bacillus subtilisYdjKsubtilis ]561Thiamine-monophosphate kinaseUniRef100_O05514Bacillus subtilisThiL[ Bacillus subtilis ]562Hypothetical UPF0079 protein ydiBUniRef100_O05515Bacillus subtilisYdiB[ Bacillus subtilis ]563YdiC protein [ Bacillus subtilis ]UniRef100_O05516Bacillus subtilisYdiC564YdiD protein [ Bacillus subtilis ]UniRef100_O005517Bacillus subtilisYdiD565Probable O-sialoglycoproteinUniRef100_O05518Bacillus subtilisGcpendopeptidase [ Bacillus subtilis ]566YdiF567YdiF568Molybdenum cofactor biosynthesisUniRef100_O05520Bacillus subtilisYdiGprotein C [ Bacillus subtilis ]569Redox-sensing transcriptionalUniRef100_O05521Bacillus subtilisYdiHrepressor rex [ Bacillus subtilis ]570Ydil [ Bacillus halodurans ]UniRef100_Q9Z9P5Bacillus halodurans571TatCY572Hypothetical lipoprotein ydiK precursorUniRef100_O05524Bacillus subtilis[ Bacillus subtilis ]573YdiL57410 kDa chaperonin [ Bacillus subtilis ]UniRef100_P28599Bacillus subtilis57560 kDa chaperonin [ Bacillus subtilis ]UniRef100_P28598Bacillus subtilisGroEL576577578Hypothetical protein yolDUniRef100_O64030Bacteriophage SPBc2[Bacteriophage SPBc2]579580581YoaR [ Bacillus subtilis ]UniRef100_O34611Bacillus subtilisYoaR582Hypothetical protein yfmQ [ BacillusUniRef100_O06475Bacillus subtilisYfmQsubtilis ]583584YoqW protein [Bacteriophage SPBc2]UniRef100_O64131BacteriophageYoqWSPBc2585Lin2076 protein [ Listeria innocua ]UniRef100_Q92A46Listeria innocuaYerO586PEP synthase [ Bacillus subtilis ]UniRef100_O34309Bacillus subtilisPps587Hypothetical protein yoaF [ BacillusUniRef100_O31829Bacillus subtilissubtilis ]588Hypothetical protein [ StaphylococcusUniRef100_Q6GK76Staphylococcus aureusaureus ]589Short-chain dehydrodenaseUniRef100_Q97LM1ClostridiumDltE[ Clostridium acetobutylicum ]acetobutylicum590Type B carboxylesterase [ Bacillus sp.UniRef100_Q9L378Bacillus sp. BP-7PnbABP-7]591Inositol transport proteinUniRef100_Q8E5X2OceanobacillusIolF[ Oceanobacillus iheyensis ]iheyensis592Phage shock protein A homologUniRef100_P54617Bacillus subtilisPspA[ Bacillus subtilis ]593YdjG protein [ Bacillus subtilis ]UniRef100_O34434Bacillus subtilisYdjG594YdjH protein [ Bacillus subtilis ]UniRef100_O35004Bacillus subtilisYdjH595YdjI protein [ Bacillus subtilis ]UniRef100_O34789Bacillus subtilisYdjI596Putative oxidoreductaseUniRef100_Q67S08SymbiobacteriumYtmO[ Symbiobacterium thermophilum ]thermophilum597YrhO [ Bacillus subtilis ]UniRef100_O05405Bacillus subtilisYrhO598YrhP599Helix-turn-helix domain proteinUniRef100_Q73C00Bacillus cereus[ Bacillus cereus ]600Stage V sporulation protein E [ BacillusUniRef100_Q9K7T4BacillusSpoVEhalodurans ]halodurans601Stage V sporulation protein E [ BacillusUniRef100_Q9K7T3BacillusFtsWhalodurans ]halodurans602603Hypothetical protein [ Bacillus cereus ]UniRef100_Q72Z89Bacillus cereus604BH1889 protein [ Bacillus halodurans ]UniRef100_Q9KBN6BacillusYobVhalodurans605YjeA606YjeA607TreA608Putative HTH-type transcriptionalUniRef100_O06987Bacillus subtilisYvdEregulator yvdE [ Bacillus subtilis ]609Hypothetical protein yvdF [ BacillusUniRef100_O06988Bacillus subtilisYvdFsubtilis ]610Hypothetical protein yvdG [ BacillusUniRef100_O06989Bacillus subtilisYvdGsubtilis ]611Hypothetical protein yvdH [ BacillusUniRef100_O06990Bacillus subtilisYvdHsubtilis ]612Hypothetical protein yvdI [ BacillusUniRef100_O06991Bacillus subtilisYvdIsubtilis ]613Hypothetical protein yvdJ [ BacillusUniRef100_O06992Bacillus subtilisYvdJsubtilis ]614Hypothetical glycosyl hydrolase yvdKUniRef100_O06993Bacillus subtilisYvdK[ Bacillus subtilis ]615Oligo-1,6-glucosidase [ Bacillus subtilis ]UniRef100_O06994Bacillus subtilisMalL616Putative beta-phosphoglucomutaseUniRef100_O06995Bacillus subtilisPgcM[ Bacillus subtilis ]617Tyrosyl-tRNA synthetase 2 [ BacillusUniRef100_P25151Bacillus subtilisTyrZsubtilis ]618Putative HTH-type transcriptionalUniRef100_P25150Bacillus subtilisYwaEregulator ywaE [ Bacillus subtilis ]619620Hypothetical protein SE2399UniRef100_Q8CQM7Staphylococcus epidermidis[ Staphylococcus epidermidis ]621Hypothetical protein ydjM [ BacillusUniRef100_P40775Bacillus subtilisYdjMsubtilis ]622YdjN protein [ Bacillus subtilis ]UniRef100_O34353Bacillus subtilisYdjN623Hypothetical protein [ Bacillus cereus ]UniRef100_Q81AT6Bacillus cereusYeaA624625Signal peptidase I [ Bacillus cereus ]UniRef100_Q73C25Bacillus cereusSipS626627Hypothetical protein yhfK [ BacillusUniRef100_O07609Bacillus subtilisYhfKsubtilis ]628Transcriptional regulator [ BacillusUniRef100_Q9K766BacillusYdeEhalodurans]halodurans629Spore coat protein A [ Bacillus subtilis ]UniRef100_P07788Bacillus subtilisCotA630YkrP631Extracellular protein [ LactobacillusUniRef100_Q88T27LactobacillusYcdAplantarum ]plantarum632Hypothetical UPF0018 protein yeaBUniRef100_P46348Bacillus subtilisYeaB[ Bacillus subtilis ]633YeaC [ Bacillus subtilis ]UniRef100_P94474Bacillus subtilisYeaC634Hypothetical protein [ Bacillus cereus ]UniRef100_Q739D8Bacillus cereusYeaD635YebA [ Bacillus subtilis ]UniRef100_P94476Bacillus subtilisYebA636GMP synthase [glutamine-hydrolyzing]UniRef100_P29727glutamine-GuaA[ Bacillus subtilis ]hydrolyzing637Hypoxanthine/guanine permeaseUniRef100_O34987Bacillus subtilisPbuG[ Bacillus subtilis ]638YebC639Hypothetical UPF0316 protein yebEUniRef100_O34624Bacillus subtilisYebE[ Bacillus subtilis ]640YebG protein [ Bacillus subtilis ]UniRef100_O34700Bacillus subtilis641PhosphoribosylaminoimidazoleUniRef100_P12044Bacillus subtilisPurEcarboxylase catalytic subunit [ Bacillussubtilis ]642PurK643Adenylosuccinate lyase [ BacillusUniRef100_P12047Bacillus subtilisPurBsubtilis ]644Phosphoribosylaminoimidazole-UniRef100_P12046Bacillus subtilisPurCsuccinocarboxamide synthase [ Bacillussubtilis ]645Hypothetical UPF0062 protein yexAUniRef100_P12049Bacillus subtilis[ Bacillus subtilis ]646PhosphoribosylformylglycinamidineUniRef100_P12041Bacillus subtilisPurQsynthase I [ Bacillus subtilis ]647PhosphoribosylformylglycinamidineUniRef100_P12042Bacillus subtilisPurLsynthase II [ Bacillus subtilis ]648AmidophosphoribosyltransferaseUniRef100_P00497Bacillus subtilisPurFprecursor [ Bacillus subtilis ]649PurM650PhosphoribosylglycinamideUniRef100_P12040Bacillus subtilisPurNformyltransferase [ Bacillus subtilis ]651Bifunctional purine biosynthesis proteinUniRef100_P12048Includes:PurHpurH [Includes:PhosphoribosylaminoimidazolecarboxamidePhosphoribosylaminoimidazolecarboxamideformyltransferaseformyltransferase (EC 2.1.2.3)(EC 2.1.2.3)(AICAR transformylase); IMP(AICARcyclohydrolase (EC 3.5.4.10)transformylase);(Inosinicase) (IMP synthetase) (ATIC)]IMP[ Bacillus subtilis ]cyclohydrolase(EC 3.5.4.10)(Inosinicase)(IMP synthetase)(ATIC)652Phosphoribosylamine--glycine ligaseUniRef100_P12039Bacillus subtilisPurD[ Bacillus subtilis ]653YxbF654Putative cytochrome P450 yjiBUniRef100_O34374Bacillus subtilisYjiB[ Bacillus subtilis ]655656Hypothetical lipoprotein yybP precursorUniRef100_P37488Bacillus subtilisYybP[ Bacillus subtilis ]657Transposase [ ThermoanaerobacterUniRef100_Q8RCM3Thermoanaerobactertengcongensis ]tengcongensis658Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81ZG4Bacillus anthracis659Putative adenine deaminase yerAUniRef100_O34909Bacillus subtilisYerA[ Bacillus subtilis ]660YerB protein [ Bacillus subtilis ]UniRef100_O34968Bacillus subtilisYerB661YecD [ Bacillus subtilis ]UniRef100_Q7BVT7Bacillus subtilisYerC662PcrB protein homolog [ Bacillus subtilis ]UniRef100_O34790Bacillus subtilisPcrB663ATP-dependent DNA helicase pcrAUniRef100_O34580Bacillus subtilisPcrA[ Bacillus subtilis ]664DNA ligase [ Bacillus subtilis ]UniRef100_O31498Bacillus subtilisLigA665YerH protein [ Bacillus subtilis ]UniRef100_O34629Bacillus subtilisYerH666BH0586 protein [ Bacillus halodurans ]UniRef100_Q9KF99Bacillus halodurans667668669BH0589 protein [ Bacillus halodurans ]UniRef100_Q9KF96Bacillus halodurans670Phosphotriesterase homology proteinUniRef100_P45548Escherichia coli[ Escherichia coli ]671Similar to unknown protein YhfS ofUniRef100_Q7N5F2PhotorhabdusCsdEscherichia coli [ Photorhabdusluminescensluminescens ]672PhosphopentomutaseUniRef100_Q67S06SymbiobacteriumDrm[ Symbiobacterium thermophilum ]thermophilum673Putative alanine racemaseUniRef100_Q67S05Symbiobacterium[ Symbiobacterium thermophilum ]thermophilum674Glucosamine-6-phosphate deaminaseUniRef100_Q8ESL6OceanobacillusNagB[ Oceanobacillus iheyensis ]iheyensis675SapB protein [ Bacillus subtilis ]UniRef100_Q45514Bacillus subtilisSapB676OpuE677Glutamyl-tRNA(Gln) amidotransferaseUniRef100_O06492Bacillus subtilissubunit C [ Bacillus subtilis ]678Glutamyl-tRNA(Gln) amidotransferaseUniRef100_O06491Bacillus subtilisGatAsubunit A [ Bacillus subtilis ]679GatB680Hypothetical protein [ BacillusUniRef100_Q848Y2Bacillus megateriummegaterium ]681682YdhT683684Putative HTH-type transcriptionalUniRef100_O31500Bacillus subtilisYerOregulator yerO [ Bacillus subtilis ]685Swarming motility protein swrCUniRef100_O31501Bacillus subtilisYerP[ Bacillus subtilis ]686YjcK687Inosine-uridine preferring nucleosideUniRef100_Q81DM6Bacillus cereushydrolase [ Bacillus cereus ]688YerQ protein [ Bacillus subtilis ]UniRef100_O31502Bacillus subtilisYerQ689Hypothetical RNA methyltransferaseUniRef100_O31503Bacillus subtilisYefAyefA [ Bacillus subtilis ]690Type I restriction-modification systemUniRef100_Q817S1Bacillus cereusspecificity subunit [ Bacillus cereus ]691Type I restriction-modification systemUniRef100_Q817S2Bacillus cereusmethylation subunit [ Bacillus cereus ]692Type IC specificity subunitUniRef100_Q9RNW0Streptococcus thermophilus[ Streptococcus thermophilus ]693Type I restriction-modification systemUniRef100_Q817S4Bacillus cereusrestriction subunit [ Bacillus cereus ]694695Beta-glucosides PTS, EIIBCAUniRef100_Q88T54LactobacillusBglP[ Lactobacillus plantarum ]plantarum6966-phospho-beta-glucosidaseUniRef100_Q88T55LactobacillusBglH[ Lactobacillus plantarum ]plantarum697LicT698Response regulator aspartateUniRef100_O34930Bacillus subtilisRapKphosphatase K [ Bacillus subtilis ]699700Methyltransferase [ Bacillus cereus ZK]UniRef100_Q639N2Bacillus cereus ZK701Hypothetical UPF0082 proteinUniRef100_P62032Bacillus cereusYeelBCE0595 [ Bacillus cereus ]702Putative HTH-type transcriptionalUniRef100_O28646Archaeoglobus fulgidusregulator AF1627 [ Archaeoglobusfulgidus ]703704YfmT [ Bacillus subtilis ]UniRef100_O06478Bacillus subtilisYfmT705YfmS [ Bacillus subtilis ]UniRef100_O06477Bacillus subtilisYfmS706YflS707YfmR [ Bacillus subtilis ]UniRef100_O06476Bacillus subtilisYfmR708709YciA protein [ Bacillus subtilis ]UniRef100_P94398Bacillus subtilisYciA710UPI00002BDF65 UniRef100 entryUniRef100_UPI00002BDF65YpdA711Ferrusion transporter proteinUniRef100_Q6U5S9Klebsiella pneumoniae[ Klebsiella pneumoniae ]712713YciC protein [ BacillusUniRef100_Q70KK8BacillusYciCamyloliquefaciens ]amyloliquefaciens714BioW715Adenosylmethionine-8-amino-7-UniRef100_P53555Bacillus subtilisBioAoxononanoate aminotransferase[ Bacillus subtilis ]7168-amino-7-oxononanoate synthaseUniRef100_P53556Bacillus subtilisBioF[ Bacillus subtilis ]717BioD protein [ BacillusUniRef100_Q70JZ0BacillusBioDamyloliquefaciens ]amyloliquefaciens718BioB protein [ BacillusUniRef100_Q70JZ1BacillusBioBamyloliquefaciens ]amyloliquefaciens719Biol protein [ BacillusUniRef100_Q70JZ2BacillusBioIamyloliquefaciens ]amyloliquefaciens720BH1501 protein [ Bacillus halodurans ]UniRef100_Q9KCR8Bacillus halodurans721YfmP722Multidrug efflux protein yfmO [ BacillusUniRef100_O06473Bacillus subtilisYfmOsubtilis ]723YfmM protein [ Bacillus subtilis ]UniRef100_O34512Bacillus subtilisYfmM724YfmL protein [ Bacillus subtilis ]UniRef100_O34750Bacillus subtilisYfmL725YfmJ protein [ Bacillus subtilis ]UniRef100_O34812Bacillus subtilisYfmJ726Hypothetical protein yfmB [ BacillusUniRef100_O34626Bacillus subtilisYfmBsubtilis ]727General stress protein 17M [ BacillusUniRef100_P80241Bacillus subtilisYflTsubtilis ]728YflS729YflS730Putative permease [ Clostridium tetani ]UniRef100_Q895A0Clostridiumtetani731Possible Zn-dependent hydrolase,UniRef100_Q6HKH5BacillusYqgXbeta-lactamase superfamily [ Bacillusthuringiensisthuringiensis ]732YflN protein [ Bacillus subtilis ]UniRef100_O34409Bacillus subtilisYflN733Zink-carboxypeptidase [ ClostridiumUniRef100_Q898E1Clostridiumtetani ]tetani734Nitric oxide synthase oxygenaseUniRef100_O34453Bacillus subtilisYflM[ Bacillus subtilis ]735Membrane protein, putative [ BacillusUniRef100_Q72YN4Bacillus cereusYvaZcereus ]736Transcriptional regulator, ArsR familyUniRef100_Q632K6Bacillus cereus ZK[ Bacillus cereus ZK]737Putative acylphosphatase [ BacillusUniRef100_O35031Bacillus subtilissubtilis ]738YflK protein [ Bacillus subtilis ]UniRef100_O34542Bacillus subtilisYflK739740741YflG protein [ Bacillus subtilis ]UniRef100_O34484Bacillus subtilisYflG742YflE743Hypothetical protein yflB [ BacillusUniRef100_O34887Bacillus subtilissubtilis ]744YflA745Probable PTS system, trehalose-UniRef100_P39794Bacillus subtilisTrePspecific IIBC component [ Bacillussubtilis ]746Alpha-glucosidase [ Bacillus sp.UniRef100_Q9L872Bacillus sp.TreADG0303]DG0303747Trehalose operon transcriptionalUniRef100_P39796Bacillus subtilisTreRrepressor [ Bacillus subtilis ]748AcetyltransferasesUniRef100_Q8RBZ9ThermoanaerobacterYvfD[ Thermoanaerobacter tengcongensis ]tengcongensis749750751Predicted pyridoxal phosphate-UniRef100_Q8RBY7ThermoanaerobacterSpsCdependent enzyme apparently involvedtengcongensisin regulation of cell wall biogenesis[ Thermoanaerobacter tengcongensis ]752YkuQ753UPI000029FB28 UniRef100 entryUniRef100_UPI000029FB28YtcB754Hypothetical protein MA2181UniRef100_Q8TNU7Methanosarcina acetivorans[ Methanosarcina acetivorans ]755756Beta 1,4 glucosyltransferase [ BacillusUniRef100_Q81GJ1Bacillus cereusYolJcereus ]757Predicted pyridoxal phosphate-UniRef100_Q8RC02ThermoanaerobacterSpsCdependent enzyme apparently involvedtengcongensisin regulation of cell wall biogenesis[ Thermoanaerobacter tengcongensis ]758Predicted dehydrogenases and relatedUniRef100_Q8RC00ThermoanaerobacterYrbEproteins [ Thermoanaerobactertengcongensistengcongensis ]759UDP-glucose: GDP-mannoseUniRef100_Q8CXB6OceanobacillusTuaDdehydrogenase [ Oceanobacillusiheyensisiheyensis ]760Hypothetical protein [ Bacillus cereusUniRef100_Q635H5Bacillus cereusYqkDZK]ZK761Hypothetical UPF0087 protein ydePUniRef100_P96673Bacillus subtilisYdeP[ Bacillus subtilis ]762Putative NAD(P)H nitroreductase yfkOUniRef100_O34475Bacillus subtilisYfkO[ Bacillus subtilis ]763YfkN764General stress protein 18 [ BacillusUniRef100_P80876Bacillus subtilisYfkMsubtilis ]765YfkK protein [ Bacillus subtilis ]UniRef100_O35019Bacillus subtilis766Amino acid transporter [ BacillusUniRef100_Q9K5Q5BacillusYflAhalodurans ]halodurans767YfkJ protein [ Bacillus subtilis ]UniRef100_O35016Bacillus subtilisYfkJ768Hypothetical protein yfkL precursorUniRef100_O34418Bacillus subtilisYfkL[ Bacillus subtilis ]769YfkH protein [ Bacillus subtilis ]UniRef100_O34437Bacillus subtilisYfkH770YfkF protein [ Bacillus subtilis ]UniRef100_O34929Bacillus subtilisYfkF771Hypothetical conserved proteinUniRef100_Q8ELS1Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]772YfkE protein [ Bacillus subtilis ]UniRef100_O34840Bacillus subtilisYfkE773YfkD protein [ Bacillus subtilis ]UniRef100_O34579Bacillus subtilisYfkD774Thioredoxin-like oxidoreductasesUniRef100_Q81IC7Bacillus cereusYfkA[ Bacillus cereus ]775YfjT protein [ Bacillus subtilis ]UniRef100_O35041Bacillus subtilis776YfjS777UPI000029390C UniRef100 entryUniRef100_UPI000029390CAraM778779YfjQ protein [ Bacillus subtilis ]UniRef100_O31543Bacillus subtilisYfjQ780YfjP protein [ Bacillus subtilis ]UniRef100_O31544Bacillus subtilisYfjP781YfjO782YfjM protein [ Bacillus subtilis ]UniRef100_O31547Bacillus subtilisYfjM783784Hypothetical protein yfjL [ BacillusUniRef100_P40773Bacillus subtilisYfjLsubtilis ]785UPI00003CB259 UniRef100 entryUniRef100_UPI00003CB259YvkB786YdhE protein [ Bacillus subtilis ]UniRef100_O05496Bacillus subtilisYdhE787Hypothetical protein yckD precursorUniRef100_P42402Bacillus subtilis[ Bacillus subtilis ]788Hypothetical metabolite transportUniRef100_O34691Bacillus subtilisYcelprotein ycel [ Bacillus subtilis ]789SacX790Levansucrase and sucrase synthesisUniRef100_P15401Bacillus subtilisSacYoperon antiterminator [ Bacillus subtilis ]791Hypothetical protein [Bacillus anthracis]UniRef100_Q81NL1BacillusYbcFanthracis792Hypothetical protein ybcD [ BacillusUniRef100_Q639F7Bacillus cereusYbcDcereus ZK]ZK793Potential NADH-quinoneUniRef100_P39755Bacillus subtilisNdhFoxidoreductase subunit 5 [ Bacillussubtilis ]794YbcI protein [ Bacillus subtilis ]UniRef100_O34380Bacillus subtilisYbcI795YraA796TPP-dependent acetoinUniRef100_Q81PM6BacillusAcoAdehydrogenase E1 alpha-subunitanthracis[ Bacillus anthracis ]797TPP-dependent acetoinUniRef100_Q736U7Bacillus cereusAcoBdehydrogenase E1 beta-subunit[ Bacillus cereus ]798Dihydrolipoyllysine-residueUniRef100_O31550Bacillus subtilisAcoCacetyltransferase component of acetoincleaving system [ Bacillus subtilis ]799Dihydrolipoyl dehydrogenase [ BacillusUniRef100_O34324Bacillus subtilisAcoLsubtilis ]800Acetoin operon transcriptionalUniRef100_Q736V6Bacillus cereusAcoRactivator, putative [ Bacillus cereus ]801Hypothetical UPF0060 protein yfjFUniRef100_O31553Bacillus subtilisYfjF[ Bacillus subtilis ]802Maltose-6′-phosphate glucosidaseUniRef100_P54716Bacillus subtilisMalA[ Bacillus subtilis ]803HTH-type transcriptional regulator glvRUniRef100_P54717Bacillus subtilisYfiA[ Bacillus subtilis ]804PTS system, arbutin-like IIBCUniRef100_P54715Bacillus subtilisMalPcomponent [ Bacillus subtilis ]805UPI00003651CF UniRef100 entryUniRef100_UPI00003651CF806UPI000034AA1D UniRef100 entryUniRef100_UPI000034AA1D807Transcriptional regulator, MarR familyUniRef100_Q638I2Bacillus cereusYvaP[ Bacillus cereus ZK]ZK808YfiD809Hypothetical protein yfiE [ BacillusUniRef100_P54721Bacillus subtilisYfiEsubtilis ]810Xylosidase/arabinosidase [BacteroidesUniRef100_Q8A036BacteroidesXynBthetaiotaomicron ]thetaiotaomicron811Xylan beta-1,4-xylosidase [ BacillusUniRef100_Q9K6P5BacillusXynBhalodurans ]halodurans812Trancriptional regulator of AraC familyUniRef100_Q97FW8ClostridiumYbfI[ Clostridium acetobutylicum ]acetobutylicum813YtcQ814NAD(P)H dehydrogenase, quinoneUniRef100_Q638S8Bacillus cereus ZKfamily [ Bacilius cereus ZK]815Mutator MutT protein [ BacillusUniRef100_Q9K8B7BacillusYjhBhalodurans ]halodurans816YfiT protein [ Bacillus subtilis ]UniRef100_O31562Bacillus subtilisYfiT817YfiX [ Bacillus subtilis ]UniRef100_O52961Bacillus subtilisYfiX818Hypothetical protein yfhB [ BacillusUniRef100_O31570Bacillus subtilisYfhBsubtilis ]819YfhC protein [ Bacillus subtilis ]UniRef100_O31571Bacillus subtilisYfhC820Hypothetical protein yfhD [ BacillusUniRef100_O31572Bacillus subtilissubtilis ]821822BH0923 homolog [Bacillus cereus]UniRef100_Q81IA0Bacillus cereus823Hypothetical UPF0105 protein yfhFUniRef100_O31574Bacillus subtilisYfhF[ Bacillus subtilis ]824Regulatory protein recX [ BacillusUniRef100_O31575Bacillus subtilisYfhGsubtilis ]825YfhH protein [ Bacillus subtilis ]UniRef100_O31576Bacillus subtilisYfhH826827YfhJ protein [ Bacillus subtilis ]UniRef100_O31578Bacillus subtilis828CsbB protein [ Bacillus subtilis ]UniRef100_Q45539Bacillus subtilisCsbB829Hypothetical protein SE1997UniRef100_Q8CR87Staphylococcus epidermidis[ Staphylococcus epidermidis ]830YfhO protein [ Bacillus subtilis ]UniRef100_O31582Bacillus subtilisYfhO831YfhP protein [ Bacillus subtilis ]UniRef100_O31583Bacillus subtilisYfhP832YfhQ protein [ Bacillus subtilis ]UniRef100_O31584Bacillus subtilisYfhQ833YfhS protein [ Bacillus subtilis ]UniRef100_O31585Bacillus subtilis834Unidentfied dehydrogenase [ BacillusUniRef100_P71079Bacillus subtilisFabLsubtilis ]835836Hypothetical protein ygaB [ BacillusUniRef100_P71080Bacillus subtilissubtilis ]837YgaC protein [ Bacillus subtilis ]UniRef100_Q796Z1Bacillus subtilisYgaC838Unidentified transporter-ATP bindingUniRef100_P71082Bacillus subtilisYgaD[ Bacillus subtilis ]839Oligopeptide ABC transporter [ BacillusUniRef100_Q9K6T0BacillusAppDhalodurans ]halodurans840Oligopeptide ABC transporter [ BacillusUniRef100_Q9K6T1BacillusAppFhalodurans ]halodurans841Dipeptide transporter protein DppAUniRef100_P94310Bacillus firmusOppA[ Bacillus firmus ]842Dipeptide ABC transporter [ BacillusUniRef100_Q9K6T3BacillusAppBhalodurans ]halodurans843Dipeptide transport system permeaseUniRef100_P94312BacillusAppCprotein dppC [ Bacillus pseudofirmus ]pseudofirmus844Hypothetical 40.7 kd protein [ BacillusUniRef100_P71083Bacillus subtilisYgaEsubtilis ]845Glutamate-1-semialdehyde 2,1-UniRef100_P71084Bacillus subtilisGsaBaminomutase 2 [ Bacillus subtilis ]846YgaF protein [ Bacillus subtilis ]UniRef100_Q796Y8Bacillus subtilisYgaF847Peroxide operon regulator [ BacillusUniRef100_P71086Bacillus subtilisPerRsubtilis ]848849Hypothetical protein ygxA [ BacillusUniRef100_Q04385Bacillus subtilisYgxAsubtilis ]850RapD851852853854855856Hypothetical protein [ BacillusUniRef100_Q6HH72Bacillus thuringiensisthuringiensis ]857YxiD858Hypothetical protein [unculturedUniRef100_Q64DF2uncultured archaeonarchaeon GZfos18F2]GZfos18F2859860YxiD861RapE862Putative membrane proteinUniRef100_Q82NM0Streptomyces avermitilis[ Streptomyces avermitilis ]8633-dehydroquinate dehydratase [ ListeriaUniRef100_Q8Y9N4ListeriaAroCmonocytogenes ]monocytogenes864ThiC865Putative aliphatic sulfonates transportUniRef100_P97027Bacillus subtilisSsuBATP-binding protein ssuB [ Bacillussubtilis ]866Putative aliphatic sulfonates bindingUniRef100_P40400Bacillus subtilisSsuAprotein precursor [ Bacillus subtilis ]867Putative aliphatic sulfonates transportUniRef100_P40401Bacillus subtilisSsuCpermease protein ssuC [ Bacillussubtilis ]868SsuD869SsuD870Hypothetical lipoprotein ygaOUniRef100_P97029Bacillus subtilisYgaOprecursor [ Bacillus subtilis ]871DNA-binding protein [ BacillusUniRef100_Q81V18Bacillus anthracisanthracis ]872873ABC-type multidrug transport system,UniRef100_Q8RBH0ThermoanaerobacterYhaQATPase componenttengcongensis[ Thermoanaerobacter tengcongensis ]87487587687787830S ribosomal protein S14-2 [ BacillusUniRef100_O31587Bacillus subtilissubtilis ]879Hypothetical protein yhzB [ BacillusUniRef100_O31588Bacillus subtilisYhzBsubtilis ]880Hypothetical 48.5 kd protein [ BacillusUniRef100_P97030Bacillus subtilisYhbAsubtilis ]881Hypothetical 35.8 kd protein [ BacillusUniRef100_P97031Bacillus subtilisYhbBsubtilis ]882CspR [ Bacillus subtilis ]UniRef100_Q45512Bacillus subtilisCspR883Hypothetical 27 kd protein [ BacillusUniRef100_P97032Bacillus subtilisYhbDsubtilis ]884Hypothetical Cytosolic Protein [ BacillusUniRef100_Q813H1Bacillus cereusYhbEcereus ]885Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81PD2BacillusYhbFanthracis886887PrkA protein [ Bacillus subtilis ]UniRef100_P39134Bacillus subtilisPrkA888Stress response UPF0229 proteinUniRef100_P45742Bacillus subtilisYhbHyhbH [ Bacillus subtilis ]889YhbJ protein [ Bacillus subtilis ]UniRef100_O31593Bacillus subtilisYhbJ890Hypothetical transport protein yhcAUniRef100_P54585Bacillus subtilisYhcA[ Bacillus subtilis ]891Hypothetical protein yhcB [ BacillusUniRef100_P54586Bacillus subtilisYhcBsubtilis ]892YhcC893894Hypothetical ABC transporter ATP-UniRef100_P54591Bacillus subtilisbinding protein yhcG [ Bacillus subtilis ]895Hypothetical ABC transporter ATP-UniRef100_P54592Bacillus subtilisYhcHbinding protein yhcH [ Bacillus subtilis ]896Hypothetical protein yhcI [ BacillusUniRef100_P54593Bacillus subtilisYhcIsubtilis ]897Cold shock protein cspB [ BacillusUniRef100_P32081Bacillus subtilissubtilis ]898ABC transporter, ATP-binding proteinUniRef100_Q6HP89BacillusYusC[ Bacillus thuringiensis ]thuringiensis899MW0417 protein [ StaphylococcusUniRef100_Q8NY20StaphylococcusYusBaureus ]aureus900ABC transporter substrate-bindingUniRef100_Q81IN6Bacillus cereusYhcJprotein [ Bacillus cereus ]901Hypothetical symporter yhcL [ BacillusUniRef100_P54596Bacillus subtilisYhcLsubtilis ]902Hypothetical protein yhcM [ BacillusUniRef100_P54597Bacillus subtilisYhcMsubtilis ]903Acylamino-acid-releasing enzymeUniRef100_Q8CXN6OceanobacillusYuxL[ Oceanobacillus iheyensis ]iheyensis904Lipoprotein yhcN precursor [ BacillusUniRef100_P54598Bacillus subtilisYhcNsubtilis ]905Hypothetical protein yhcP [ BacillusUniRef100_P54600Bacillus subtilisYhcPsubtilis ]906Hypothetical protein yhcQ [ BacillusUniRef100_P54601Bacillus subtilisYhcQsubtilis ]907Two-component sensor histidineUniRef100_O31661Bacillus subtilisKinEkinase [ Bacillus subtilis ]908Hypothetical protein yhcR precursorUniRef100_P54602Bacillus subtilisYhcR[ Bacillus subtilis ]909Hypothetical protein yhcS [ BacillusUniRef100_P54603Bacillus subtilisYhcSsubtilis ]910Hypothetical pseudouridine synthaseUniRef100_P54604Bacillus subtilisYhcTyhcT [ Bacillus subtilis ]911Hypothetical protein yhcU [ BacillusUniRef100_P54605Bacillus subtilisYhcUsubtilis ]912Hypothetical protein yhcV [ BacillusUniRef100_P54606Bacillus subtilisYhcVsubtilis ]913Hypothetical protein yhcW [ BacillusUniRef100_P54607Bacillus subtilisYhcWsubtilis ]914Hypothetical UPF0012 protein yhcXUniRef100_P54608Bacillus subtilisYhcX[ Bacillus subtilis ]915ABC transporter [ Bacillus halodurans ]UniRef100_Q9KBA3BacillusYdiFhalodurans916Hypothetical transport protein yrhGUniRef100_O05399Bacillus subtilisYrhG[ Bacillus subtilis ]917Lin0826 protein [ Listeria innocua ]UniRef100_Q92DI7Listeria innocuaYwkB918Alcohol dehydrogenase [ BacillusUniRef100_Q81CT4Bacillus cereusYogAcereus ]919Glycerol uptake operon antiterminatorUniRef100_P30300Bacillus subtilisGlpPregulatory protein [ Bacillus subtilis ]920Glycerol uptake facilitator proteinUniRef100_P18156Bacillus subtilisGlpF[ Bacillus subtilis ]921Glycerol kinase [ Bacillus subtilis ]UniRef100_P18157Bacillus subtilisGlpK922Aerobic glycerol-3-phosphateUniRef100_P18158Bacillus subtilisGlpDdehydrogenase [ Bacillus subtilis ]923Alpha-phosphoglucomutase [ BacillusUniRef100_Q68VA2Bacillus subtilisYhxBsubtilis subsp. subtilis ]subsp. subtilis924Hypothetical conserved proteinUniRef100_Q8ELS7OceanobacillusYcgB[ Oceanobacillus iheyensis ]iheyensis925Transcriptional regulatorUniRef100_Q8ELS8Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]926YhcY927Hypothetical protein yhcZ [ BacillusUniRef100_O07528Bacillus subtilisYhcZsubtilis ]928Hypothetical protein yhdA [ BacillusUniRef100_O07529Bacillus subtilisYhdAsubtilis ]929930931Hypothetical UPF0074 protein yhdEUniRef100_O07573Bacillus subtilisYhdE[ Bacillus subtilis ]932Flavohemoprotein [ Bacillus halodurans ]UniRef100_Q9RC40BacillusHmphalodurans933Stage V sporulation protein R [ BacillusUniRef100_P37875Bacillus subtilisSpoVRsubtilis ]934Probable endopeptidase lytE precursorUniRef100_P54421Bacillus subtilisLytE[ Bacillus subtilis ]935CitR936CitA937Glucose dehydrogenase-B [ BacillusUniRef100_Q9Z9R3Bacillus haloduranshalodurans ]938Hypothetical oxidoreductase yhdFUniRef100_O07575Bacillus subtilisYhdF[ Bacillus subtilis ]939Hypothetical protein yhdH [ BacillusUniRef100_O07577Bacillus subtilisYhdHsubtilis ]9402,4-diaminobutyrate decarboxylaseUniRef100_Q9KFB9Bacillus halodurans[ Bacillus halodurans ]941YdeE protein [ Bacillus subtilis ]UniRef100_P96662Bacillus subtilisYdeE942YdeL protein [ Bacillus subtilis ]UniRef100_P96669Bacillus subtilisYdeL943BH1582 protein [ Bacillus halodurans ]UniRef100_Q9KCI9BacillusYhdJhalodurans944YhdK [ Bacillus subtilis subsp.UniRef100_Q7X2K9Bacillus subtilis subsp.spizizenii ]spizizenii945YhdL [ Bacillus subtilis subsp. spizizenii ]UniRef100_Q7X2L0Bacillus subtilisYhdLsubsp. spizizenii946Hypothetical protein yhdM (RNAUniRef100_O07582Bacillus subtilisSigMpolymerase ECF (Extracytoplasmicfunction)-type sigma factor) [ Bacillussubtilis ]947YrkC948Hypothetical protein yhdO [ BacillusUniRef100_O07584Bacillus subtilisYhdOsubtilis ]949950Acyl-CoA thioesterase 1 [ ClostridiumUniRef100_Q97DR5Clostridium acetobutylicumacetobutylicum ]951UPI00003CB259 UniRef100 entryUniRef100_UPI00003CB259YvkB952YhdP953HTH-type transcriptional regulatorUniRef100_O07586Bacillus subtilisYhdQcueR [ Bacillus subtilis ]954YhdT955956BH3511 protein [ Bacillus halodurans ]UniRef100_Q9K762Bacillus halodurans957Sporulation specific N-acetylmuramoyl-UniRef100_Q8CX69OceanobacillusCwlCL-alanine amidase [Oceanobacillusiheyensisiheyensis ]958Protein crcB homolog 1 [ BacillusUniRef100_O07590Bacillus subtilisYhdUsubtilis ]959Protein crcB homolog 2 [ BacillusUniRef100_O07591Bacillus subtilisYhdVsubtilis ]960YhdW961962Hypothetical UPF0003 protein yhdYUniRef100_O07594Bacillus subtilisYhdY[ Bacillus subtilis ]963NAD-dependent deacetylase [ BacillusUniRef100_O07595Bacillus subtilisYhdZsubtilis ]964965Hypothetical protein yheN [ BacillusUniRef100_O07596Bacillus subtilisYheNsubtilis ]966Dat967Na(+)/H(+) antiporter [ Bacillus subtilis ]UniRef100_O07553Bacillus subtilisNhaC968Hypothetical protein yoxA [ BacillusUniRef100_P39840Bacillus subtilisYoxAsubtilis ]969Hypothetical protein ydhH [ BacillusUniRef100_O05500Bacillus subtilisYdhHsubtilis ]970Hypothetical protein [ Bacillus cereusUniRef100_Q63EB4Bacillus cereus ZKZK]971Hypothetical protein [ Bacillus cereus ]UniRef100_Q81GF4Bacillus cereus972Stress response protein nhaX [ BacillusUniRef100_O07552Bacillus subtilisNhaXsubtilis ]973Hypothetical protein yhel [ BacillusUniRef100_O07550Bacillus subtilisYheIsubtilis ]974Hypothetical protein yheH [ BacillusUniRef100_O07549Bacillus subtilisYheHsubtilis ]975Hypothetical protein yheG [ BacillusUniRef100_O07548Bacillus subtilisYheGsubtilis ]976Small, acid-soluble spore protein BUniRef100_P04832Bacillus subtilis[ Bacillus subtilis ]977BH1139 protein [ Bacillus halodurans ]UniRef100_Q9KDS2Bacillus halodurans978Sugar ABC transporter ATP-bindingUniRef100_Q8CUH3OceanobacillusMsmXprotein [ Oceanobacillus iheyensis ]iheyensis979Fis-type helix-turn-helix domain proteinUniRef100_Q73A84Bacillus cereusYxkF[ Bacillus cereus ]980Hypothetical protein yheE [ BacillusUniRef100_O07546Bacillus subtilissubtilis ]981Hypothetical protein yheD [ BacillusUniRef100_O07545Bacillus subtilisYheDsubtilis ]982Hypothetical protein yheC [ BacillusUniRef100_O07544Bacillus subtilisYheCsubtilis ]983Hypothetical protein yheB [ BacillusUniRef100_O07543Bacillus subtilisYheBsubtilis ]984Hypothetical protein yheA [ BacillusUniRef100_O07542Bacillus subtilisYheAsubtilis ]985Stress response protein yhaX [ BacillusUniRef100_O07539Bacillus subtilisYhaXsubtilis ]986HemZ987YhaR protein [ Bacillus subtilis ]UniRef100_O07533Bacillus subtilisYhaR988Response regulator aspartateUniRef100_P96649Bacillus subtilisRapIphosphatase I [ Bacillus subtilis ]989990Hypothetical protein yhaQ [ BacillusUniRef100_O07524Bacillus subtilisYhaQsubtilis ]991Hypothetical protein yhaP [ BacillusUniRef100_O07523Bacillus subtilisYhaPsubtilis ]992YhaO993Hypothetical protein yhaN [ BacillusUniRef100_O08455Bacillus subtilisYhaNsubtilis ]994YhaM995Hypothetical protein yhaL [ BacillusUniRef100_O07520Bacillus subtilissubtilis ]996Foldase protein prsA precursorUniRef100_P24327Bacillus subtilisPrsA[ Bacillus subtilis ]997998Hypothetical protein yhaK [ BacillusUniRef100_O07519Bacillus subtilissubtilis ]999Hypothetical protein yhaI [ BacillusUniRef100_O07517Bacillus subtilisYhaIsubtilis ]1000Protease production regulatory proteinUniRef100_P11065Bacillus subtilisHprhpr [ Bacillus subtilis ]1001Hypothetical protein yhaH [ BacillusUniRef100_O07516Bacillus subtilisYhaHsubtilis ]1002Probable tryptophan transport proteinUniRef100_O07515Bacillus subtilisYhaG[ Bacillus subtilis ]1003Phosphoserine aminotransferaseUniRef100_P80862Bacillus subtilisSerC[ Bacillus subtilis ]1004Hit protein [ Bacillus subtilis ]UniRef100_O07513Bacillus subtilisHit10051006ABC-type transporter ATP-bindingUniRef100_P55339Bacillus subtilisEcsAprotein ecsA [ Bacillus subtilis ]1007Protein ecsB [ Bacillus subtilis ]UniRef100_P55340Bacillus subtilisEcsB1008Protein ecsC [ Bacillus subtilis ]UniRef100_P55341Bacillus subtilisEcsC1009YhaA protein [ Bacillus subtilis ]UniRef100_O07598Bacillus subtilisYhaA1010Hypothetical protein yhfA [ BacillusUniRef100_O07599Bacillus subtilisYhfAsubtilis ]1011Hypothetical protein yhgC [ BacillusUniRef100_P38049Bacillus subtilisYhgCsubtilis ]1012Penicillin-binding protein 1F [ BacillusUniRef100_P38050Bacillus subtilisPbpFsubtilis ]1013Uroporphyrinogen decarboxylaseUniRef100_P32395Bacillus subtilisHemE[ Bacillus subtilis ]1014Ferrochelatase [ Bacillus subtilis ]UniRef100_P32396Bacillus subtilisHemH1015Protoporphyrinogen oxidase [ BacillusUniRef100_P32397Bacillus subtilisHemYsubtilis ]1016YhgD1017Hypothetical protein yhgE [ BacillusUniRef100_P32399Bacillus subtilisYhgEsubtilis ]10183-oxoacyl-[acyl-carrier-protein]UniRef100_O07600acyl-carrier-FabHBsynthase III protein 2 [ Bacillus subtilis ]protein1019Hypothetical protein yhfE [ BacillusUniRef100_O07603Bacillus subtilisYhfEsubtilis ]10201021Hypothetical protein yhfG [ BacillusUniRef100_O07605Bacillus subtilisGltTsubtilis ]1022Hypothetical protein yhfI [ BacillusUniRef100_O07607Bacillus subtilisYhfIsubtilis ]1023Hypothetical protein yhfJ [ BacillusUniRef100_O07608Bacillus subtilisYhfJsubtilis ]1024Hypothetical protein yhfL [ BacillusUniRef100_O07610Bacillus subtilisYhfLsubtilis ]1025Hypothetical protein yhfM precursorUniRef100_O07611Bacillus subtilisYhfM[ Bacillus subtilis ]1026BH2909 protein [ Bacillus halodurans ]UniRef100_Q9K8U3Bacillus halodurans1027Branched-chain amino acid transporterUniRef100_Q9K8U2BacillusAzlC[ Bacillus halodurans ]halodurans1028BH2911 protein [ Bacillus halodurans ]UniRef100_Q9K8U1Bacillus halodurans1029Putative metalloprotease yhfN [ BacillusUniRef100_P40769Bacillus subtilisYhfNsubtilis ]1030AprE1031Transporter, drug/metabolite exporterUniRef100_Q63D40Bacillus cereusYdeDfamily [ Bacillus cereus ZK]ZK1032Hypothetical protein yhfQ [ BacillusUniRef100_O07616Bacillus subtilisYhfQsubtilis ]1033YfmD protein [ Bacillus subtilis ]UniRef100_O34933Bacillus subtilisYfmD1034YfmE protein [ Bacillus subtilis ]UniRef100_O34832Bacillus subtilisYfmE1035Hypothetical protein yhfR [ BacillusUniRef100_O07617Bacillus subtilisYhfRsubtilis ]1036Heme-based aerotactic transducerUniRef100_O07621Bacillus subtilisHemAThemAT [ Bacillus subtilis ]1037Rieske 2Fe-2S iron-sulfur protein,UniRef100_Q73E94Bacillus cereusYhfWputative [ Bacillus cereus ]1038YhxC1039Hypothetical protein yhzC [ BacillusUniRef100_O31594Bacillus subtilissubtilis ]1040ComK1041YhjD1042YhjE1043Signal peptidase I V [ Bacillus subtilis ]UniRef100_O07560Bacillus subtilisSipV1044Minor extracellular protease eprUniRef100_P16396Bacillus subtilisEprprecursor [ Bacillus subtilis ]1045Putative permease [ KlebsiellaUniRef100_Q765R6KlebsiellaYybOpneumoniae ]pneumoniae1046Hypothetical protein [ EnterococcusUniRef100_Q82ZQ4EnterococcusPucRfaecalis ]faecalis1047Putative allantoinase [ StaphylococcusUniRef100_Q9EV52StaphylococcusPucHxylosus ]xylosus1048Peptidase, M20/M25/M40 familyUniRef100_Q82ZQ2EnterococcusYurH[ Enterococcus faecalis ]faecalis1049Hypothetical protein STY0574UniRef100_Q8XFX7Salmonella typhi[ Salmonella typhi ]1050Ureidoglycolate dehydrogenaseUniRef100_Q838P9EnterococcusYjmC[ Enterococcus faecalis ]faecalis1051Ureidoglycolate dehydrogenaseUniRef100_Q838P9EnterococcusYjmC[ Enterococcus faecalis ]faecalis1052Hypothetical protein [ EnterococcusUniRef100_Q838Q3EnterococcusSucDfaecalis ]faecalis1053Hypothetical protein [ EnterococcusUniRef100_Q838Q3Enterococcus faecalisfaecalis ]10541055Carbamate kinase [ Clostridium tetani ]UniRef100_Q890W1Clostridiumtetani1056Major facilitator family transporterUniRef100_Q838Q1EnterococcusYcbE[ Enterococcus faecalis ]faecalis1057Hypothetical protein yjfA precursorUniRef100_O34554Bacillus subtilis[ Bacillus subtilis ]1058Response regulator aspartateUniRef100_O32294Bacillus subtilisRapGphosphatase G [ Bacillus subtilis ]1059106010611062Lacl-family transcription regulatorUniRef100_O34829Bacillus subtilisMsmR[ Bacillus subtilis ]1063Multiple sugar-binding protein [ BacillusUniRef100_O34335Bacillus subtilisMsmEsubtilis ]1064Sugar transporter [ Bacillus subtilis ]UniRef100_O34706Bacillus subtilisAmyD1065Sugar transporter [ Bacillus subtilis ]UniRef100_O34518Bacillus subtilisAmyC1066Alpha-galactosidase [ Bacillus subtilis ]UniRef100_O34645Bacillus subtilisMelA1067Hypothetical protein yhjN [ BacillusUniRef100_O07568Bacillus subtilisYhjNsubtilis ]1068Spore coat-associated protein JAUniRef100_Q63FK5Bacillus cereus ZK[ Bacillus cereus ZK]1069CotJB protein [ Bacillus subtilis ]UniRef100_Q45537Bacillus subtilis1070CotJC protein [ Bacillus subtilis ]UniRef100_Q45538Bacillus subtilisCotJC1071Long-chain fatty-acid-CoA ligaseUniRef100_Q9KDT0BacillusYngI[ Bacillus halodurans ]halodurans1072Hypothetical protein yhjO [ BacillusUniRef100_O07569Bacillus subtilisYhjOsubtilis ]1073Hypothetical protein [ Bacillus cereusUniRef100_Q63FZ3Bacillus cereusLytBZK]ZK1074Sensor histidine kinase [ BacillusUniRef100_Q6HNG3BacillusPhoRthuringiensis ]thuringiensis1075Two-component response regulatorUniRef100_Q81I36Bacillus cereusYclJ[ Bacillus cereus ]1076YhjR1077Putative molybdate binding protein,UniRef100_O32208Bacillus subtilisYvgLYvgL [ Bacillus subtilis ]1078Putative molybdate transport protein,UniRef100_O32209Bacillus subtilisYvgMYvgM [ Bacillus subtilis ]1079ATP-dependent nuclease subunit BUniRef100_P23477Bacillus subtilisAddB[ Bacillus subtilis ]1080ATP-dependent nuclease subunit AUniRef100_P23478Bacillus subtilisAddA[ Bacillus subtilis ]1081Exonuclease sbcD homolog [ BacillusUniRef100_P23479Bacillus subtilisSbcDsubtilis ]1082Nuclease sbcCD subunit C [ BacillusUniRef100_O06714Bacillus subtilisYirYsubtilis ]1083Probable spore germination proteinUniRef100_O06716Bacillus subtilisgerPF [ Bacillus subtilis ]1084Probable spore germination proteinUniRef100_O06717Bacillus subtilisGerPEgerPE [ Bacillus subtilis ]1085Probable spore germination proteinUniRef100_O06718Bacillus subtilisgerPD [ Bacillus subtilis ]1086Probable spore germination proteinUniRef100_O06719Bacillus subtilisGerPCgerPC [ Bacillus subtilis ]1087Probable spore germination proteinUniRef100_O06720Bacillus subtilisgerPB [ Bacillus subtilis ]1088Probable spore germination proteinUniRef100_O06721Bacillus subtilisgerPA [ Bacillus subtilis ]1089Hypothetical protein yitR [ BacillusUniRef100_O06753Bacillus subtilissubtilis ]10901091Spore coat protein H [ Bacillus cereus ]UniRef100_Q81EE9Bacillus cereusCotH1092CotG1093YisK [ Bacillus subtilis ]UniRef100_O06724Bacillus subtilisYisK1094Hypothetical protein yloQ [ BacillusUniRef100_Q63CF2Bacillus cereusYloQcereus ZK]ZK1095YisL [ Bacillus subtilis ]UniRef100_O06725Bacillus subtilisYisL1096Hypothetical protein yisN [ BacillusUniRef100_O06727Bacillus subtilisYisNsubtilis ]1097Asparagine synthetase [ glutamine-UniRef100_O05272glutamine-AsnOhydrolyzing ] 3 [ Bacillus subtilis ]hydrolyzing1098NrgA1099Nitrogen regulatory PII proteinUniRef100_Q8ERT8Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]1100YisQ [ Bacillus subtilis ]UniRef100_O07940Bacillus subtilisYisQ1101Putative HTH-type transcriptionalUniRef100_P40331Bacillus subtilisYisRregulator yisR [ Bacillus subtilis ]1102Acetyltransferase, GNAT familyUniRef100_Q63C80Bacillus cereusYokL[ Bacillus cereus ZK]ZK1103HTH-type transcriptional regulatorUniRef100_P37947Bacillus subtilisDegAdegA [ Bacillus subtilis ]1104Hypothetical oxidoreductase yisSUniRef100_P40332Bacillus subtilisYisS[ Bacillus subtilis ]1105YisV protein [ Bacillus subtilis ]UniRef100_Q796Q6Bacillus subtilisYisV1106Diaminobutyrate-pyruvateUniRef100_Q9K9M1BacillusGabTtransaminase [ Bacillus halodurans ]halodurans1107L-2,4-diaminobutyrate decarboxylaseUniRef100_Q8YZR2Anabaena sp.[ Anabaena sp.]1108AII0394 protein [ Anabaena sp.]UniRef100_Q8YZR3Anabaena sp.1109BH2621 protein [ Bacillus halodurans ]UniRef100_Q9K9M4Bacillus halodurans1110BH2620 protein [ Bacillus halodurans ]UniRef100_Q9K9M5Bacillus halodurans1111BH2618 protein [ Bacillus halodurans ]UniRef100_Q9K9M7Bacillus halodurans1112YitI protein [ Bacillus subtilis ]UniRef100_O06744Bacillus subtilisYitI1113Glr2355 protein [ GloeobacterUniRef100_Q7N129GloeobacterYcdFviolaceus ]violaceus1114BH0411 protein [ Bacillus halodurans ]UniRef100_Q9KFR6BacillusYobVhalodurans11155-methyltetrahydrofolate S-UniRef100_Q9KCE1BacillusYitJhomocysteine methyltransferasehalodurans[ Bacillus halodurans ]1116YitJ [ Bacillus subtilis ]UniRef100_O06745Bacillus subtilisYitJ1117Hypothetical UPF0234 protein yitkUniRef100_O06746Bacillus subtilisYitK[ Bacillus subtilis ]1118YitL protein [ Bacillus subtilis ]UniRef100_O06747Bacillus subtilisYitL111911201121Hypothetical UPF0230 protein yitSUniRef100_P70945Bacillus subtilisYitS[ Bacillus subtilis ]1122Hypothetical protein yitT [ BacillusUniRef100_P39803Bacillus subtilisYitTsubtilis ]1123Intracellular proteinase inhibitorUniRef100_P39804Bacillus subtilisIpi[ Bacillus subtilis ]1124GMP reductase [ Bacillus subtilis ]UniRef100_O05269Bacillus subtilisGuaC112511261127Putative orf protein [ Bacillus subtilis ]UniRef100_P70947Bacillus subtilisYitU1128Putative orf protein [ Bacillus subtilis ]UniRef100_P70948Bacillus subtilisYitV1129YitW1130N-acetyl-gamma-glutamyl-phosphateUniRef100_P23715Bacillus subtilisArgCreductase [ Bacillus subtilis ]1131Arginine biosynthesis bifunctionalUniRef100_Q9ZJ14Includes:ArgJprotein argJ [ Includes: Glutamate N-Glutamate N-acetyltransferase (EC 2.3.1.35)acetyltransferase(Ornithine acetyltransferase) (Ornithine(EC 2.3.1.35)transacetylase) (OATase); Amino-acid(Ornithineacetyltransferase (EC 2.3.1.1) (N-acetyltransferase)acetylglutamate synthase) (AGS)](Ornithine[Contaitransacetylase)(OATase);Amino-acidacetyltransferase(EC 2.3.1.1) (N-acetylglutamatesynthase) (AGS)1132Acetylglutamate kinase [ BacillusUniRef100_P36840Bacillus subtilisArgBsubtilis ]1133Acetylornithine aminotransferaseUniRef100_P36839Bacillus subtilisArgD[ Bacillus subtilis ]1134Carbamoyl-phosphate synthase,UniRef100_P36838Bacillus subtilisCarAarginine-specific, small chain [ Bacillussubtilis ]1135Carbamoyl-phosphate synthase,UniRef100_P18185Bacillus subtilisCarBarginine-specific, large chain [ Bacillussubtilis ]1136Ornithine carbamoyltransferaseUniRef100_P18186Bacillus subtilisArgF[ Bacillus subtilis ]1137Undecaprenyl-diphosphatase 1UniRef100_Q81HV4Bacillus cereusYubB[ Bacillus cereus ]1138YjzC protein [ Bacillus subtilis ]UniRef100_O34585Bacillus subtilis11391140Hypothetical protein yjaU [ BacillusUniRef100_O35001Bacillus subtilisYjaUsubtilis ]1141ArgF and med genes, partial andUniRef100_O32435Bacillus subtilisYjaVcomplete cds [ Bacillus subtilis ]1142Transcriptional activator protein medUniRef100_O32436Bacillus subtilisMedprecursor [ Bacillus subtilis ]1143ComG operon repressor [ BacillusUniRef100_O32437Bacillus subtilissubtilis ]1144Hypothetical protein yjzB [ BacillusUniRef100_O34891Bacillus subtilissubtilis ]11453-oxoacyl-[acyl-carrier-protein]UniRef100_O34746acyl-carrier-FabHAsynthase III protein 1 [ Bacillus subtilis ]protein1146Beta-ketoacyl-acyl carrier proteinUniRef100_O34340Bacillus subtilisFabFsynthase II [ Bacillus subtilis ]1147YjaZ protein [ Bacillus subtilis ]UniRef100_O31596Bacillus subtilisYjaZ1148Oligopeptide transport ATP-bindingUniRef100_P42064Bacillus subtilisAppDprotein appD [ Bacillus subtilis ]1149Oligopeptide transport ATP-bindingUniRef100_P42065Bacillus subtilisAppFprotein appF [ Bacillus subtilis ]1150Oligopeptide-binding protein appAUniRef100_P42061Bacillus subtilisAppAprecursor [ Bacillus subtilis ]1151Oligopeptide transport systemUniRef100_P42062Bacillus subtilisAppBpermease protein appB [ Bacillussubtilis ]1152Oligopeptide transport systemUniRef100_P42063Bacillus subtilisAppCpermease protein appC [ Bacillussubtilis ]1153Permease, putative [ Bacillus cereus ]UniRef100_Q734Y3Bacillus cereusYvqJ1154YjbA1155Tryptophanyl-tRNA synthetaseUniRef100_P21656Bacillus subtilisTrpS[ Bacillus subtilis ]1156Oligopeptide-binding protein oppAUniRef100_P24141Bacillus subtilisOppAprecursor [ Bacillus subtilis ]1157Oligopeptide transport systemUniRef100_P24138Bacillus subtilisOppBpermease protein oppB [ Bacillussubtilis ]1158Oligopeptide transport systemUniRef100_P24139Bacillus subtilisOppCpermease protein oppC [ Bacillussubtilis ]1159Oligopeptide transport ATP-bindingUniRef100_P24136Bacillus subtilisOppDprotein oppD [ Bacillus subtilis ]1160Oligopeptide transport ATP-bindingUniRef100_P24137Bacillus subtilisOppFprotein oppF [ Bacillus subtilis ]1161YjbC protein [ Bacillus subtilis ]UniRef100_O31601Bacillus subtilisYjbC1162Regulatory protein spx [ BacillusUniRef100_O31602Bacillus subtilisYjbDsubtilis ]1163YjbE protein [ Bacillus subtilis ]UniRef100_O31603Bacillus subtilisYjbE1164Adapter protein mecA 1 [ BacillusUniRef100_P37958Bacillus subtilisMecAsubtilis ]1165Hypothetical conserved proteinUniRef100_Q8ELH8OceanobacillusYflP[ Oceanobacillus iheyensis ]iheyensis1166Hypothetical protein OB3248UniRef100_Q8ELH9Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]1167Hypothetical conserved proteinUniRef100_Q8ELI0Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]1168Response regulator of citrate/malateUniRef100_Q7ML23Vibrio vulnificusCitTmetabolism [ Vibrio vulnificus ]1169Sensor protein citS [ BacillusUniRef100_Q9RC53BacillusYufLhalodurans ]halodurans1170YjbF protein [ Bacillus subtilis ]UniRef100_O31604Bacillus subtilisYjbF1171YjbG11721173YjbH protein [ Bacillus subtilis ]UniRef100_O31606Bacillus subtilisYjbH1174YjbI protein [ Bacillus subtilis ]UniRef100_O31607Bacillus subtilisYjbI1175YjbJ protein [ Bacillus subtilis ]UniRef100_O31608Bacillus subtilisYjbJ1176YjbK protein [ Bacillus subtilis ]UniRef100_O31609Bacillus subtilisYjbK1177YjbL protein [ Bacillus subtilis ]UniRef100_O31610Bacillus subtilisYjbL1178YjbM protein [ Bacillus subtilis ]UniRef100_O31611Bacillus subtilisYjbM1179YjbN1180Hypothetical pseudouridine synthaseUniRef100_O31613Bacillus subtilisYjbOyjbO [ Bacillus subtilis ]1181YjbP protein [ Bacillus subtilis ]UniRef100_O31614Bacillus subtilisYjbP1182YjbQ protein [ Bacillus subtilis ]UniRef100_O31615Bacillus subtilisYjbQ1183Transcriptional activator tenA [ BacillusUniRef100_P25052Bacillus subtilisTenAsubtilis ]1184Regulatory protein tenI [ BacillusUniRef100_P25053Bacillus subtilisTenIsubtilis ]1185Glycine oxidase [ Bacillus subtilis ]UniRef100_O31616Bacillus subtilisGoxB1186ThiS protein [ Bacillus subtilis ]UniRef100_O31617Bacillus subtilis1187Thiazole biosynthesis protein thiGUniRef100_O31618Bacillus subtilisThiG[ Bacillus subtilis ]1188ThiF protein [ Bacillus subtilis ]UniRef100_O31619Bacillus subtilisThiF1189YjbV protein [ Bacillus subtilis ]UniRef100_O31620Bacillus subtilisYjbV1190Enoyl-[acyl-carrier-protein] reductaseUniRef100_P54616acyl-carrier-FabI[NADH] [ Bacillus subtilis ]protein1191YjbX protein [ Bacillus subtilis ]UniRef100_O31622Bacillus subtilisYjbX1192Spore coat protein Z [ Bacillus subtilis ]UniRef100_Q08312Bacillus subtilisCotZ1193Spore coat protein Y [ Bacillus subtilis ]UniRef100_Q08311Bacillus subtilisCotY1194Spore coat protein X [ Bacillus subtilis ]UniRef100_Q08313Bacillus subtilisCotX1195Spore coat protein W [ Bacillus subtilis ]UniRef100_Q08310Bacillus subtilisCotW1196Spore coat protein V [ Bacillus subtilis ]UniRef100_Q08309Bacillus subtilisCotV1197YjcA protein [ Bacillus subtilis ]UniRef100_O31623Bacillus subtilisYjcA119811991200YjcC protein [ Bacillus subtilis ]UniRef100_O31625Bacillus subtilis1201YjcD1202YngC1203GalE1204YngB protein [ Bacillus subtilis ]UniRef100_O31822Bacillus subtilisYngB1205YngA protein [ BacillusUniRef100_Q70JY6BacillusYngAamyloliquefaciens ]amyloliquefaciens1206YjcF protein [ Bacillus subtilis ]UniRef100_O31628Bacillus subtilisYjcF1207YjcG protein [ Bacillus subtilis ]UniRef100_O31629Bacillus subtilisYjcG1208YjcH protein [ Bacillus subtilis ]UniRef100_O31630Bacillus subtilisYjcH1209Hypothetical protein [ Bacillus cereus ]UniRef100_Q739H9Bacillus cereus1210BH1889 protein [ Bacillus halodurans ]UniRef100_Q9KBN6BacillusYobVhalodurans1211YjcI protein [ Bacillus subtilis ]UniRef100_O31631Bacillus subtilisYjcI1212YjcJ protein [ Bacillus subtilis ]UniRef100_O31632Bacillus subtilisYjcJ1213YjcL protein [ Bacillus subtilis ]UniRef100_O31634Bacillus subtilisYjcL1214Transcriptional regulator, MarR/EmrRUniRef100_Q97DR6Clostridium acetobutylicumfamily [ Clostridium acetobutylicum ]1215Penicillin-binding protein 4* [ BacillusUniRef100_P32959Bacillus subtilisPbpEsubtilis ]1216AbnA12171218Maltose transacetylase [ BacillusUniRef100_Q75TH6BacillusMaastearothermophilus ]stearothermophilus12191220Putative HTH-type transcriptionalUniRef100_P39647Bacillus subtilisYwfKregulator ywfK [ Bacillus subtilis ]1221Sulfite reductase [ Bacillus halodurans ]UniRef100_Q9KF76BacillusYvgRhalodurans1222Sulfite reductase [ Bacillus halodurans ]UniRef100_Q9KF75BacillusYvgQhalodurans1223Putative HTH-type transcriptionalUniRef100_O34701Bacillus subtilisYoaUregulator yoaU [ Bacillus subtilis ]1224Hypothetical transport protein yoaVUniRef100_O34416Bacillus subtilisYoaV[ Bacillus subtilis ]1225Hypothetical protein VPA0302 [ VibrioUniRef100_Q87JF1VibrioYyaHparahaemolyticus ]parahaemolyticus1226Hypothetical protein yoeB precursorUniRef100_O34841Bacillus subtilisYoeB[ Bacillus subtilis ]1227YocH1228Permease, general substrateUniRef100_Q6HMC3BacillusLmrBtransporter [ Bacillus thuringiensis ]thuringiensis1229Putative HTH-type transcriptionalUniRef100_P42105Bacillus subtilisYxaFregulator yxaF [ Bacillus subtilis ]12301231YmzD1232YeeF1233YjqB1234Phage-like element PBSX protein xkdAUniRef100_P39780Bacillus subtilisXkdA[ Bacillus subtilis ]1235HTH-type transcriptional regulator xreUniRef100_P23789Bacillus subtilisXre[ Bacillus subtilis ]123612371238Phage-like element PBSX protein xkdBUniRef100_P39781Bacillus subtilisXkdB[ Bacillus subtilis ]1239Phage-like element PBSX protein xkdCUniRef100_P39782Bacillus subtilisXkdC[ Bacillus subtilis ]1240Phage-like element PBSX protein xkdDUniRef100_P39783Bacillus subtilisXkdD[ Bacillus subtilis ]1241Phage-like element PBSX protein xtrAUniRef100_P54344Bacillus subtilis[ Bacillus subtilis ]1242Positive control factor [ Bacillus subtilis ]UniRef100_P39784Bacillus subtilisXpf1243PBSX phage terminase small subunitUniRef100_P39785Bacillus subtilisXtmA[ Bacillus subtilis ]1244PBSX phage terminase large subunitUniRef100_P39786Bacillus subtilisXtmB[ Bacillus subtilis ]1245Phage-like element PBSX protein xkdEUniRef100_P54325Bacillus subtilisXkdE[ Bacillus subtilis ]1246Phage-like element PBSX protein xkdFUniRef100_P54326Bacillus subtilisXkdF[ Bacillus subtilis ]1247Phage-like element PBSX protein xkdGUniRef100_P54327Bacillus subtilisXkdG[ Bacillus subtilis ]1248Hypothetical protein yqbG [ BacillusUniRef100_P45923Bacillus subtilisYqbGsubtilis ]1249Hypothetical protein yqbH [ BacillusUniRef100_P45924Bacillus subtilisYqbHsubtilis ]1250Phage-like element PBSX protein xkdIUniRef100_P54329Bacillus subtilisXkdI[ Bacillus subtilis ]1251Phage-like element PBSX protein xkdJUniRef100_P54330Bacillus subtilisXkdJ[ Bacillus subtilis ]1252Lin1277 protein [ Listeria innocua ]UniRef100_Q92CB2Listeria innocua1253Phage-like element PBSX protein xkdKUniRef100_P54331Bacillus subtilisXkdK[ Bacillus subtilis ]1254Phage-like element PBSX protein xkdMUniRef100_P54332Bacillus subtilisXkdM[ Bacillus subtilis ]1255Phage-like element PBSX protein xkdNUniRef100_P54333Bacillus subtilisXkdN[ Bacillus subtilis ]1256Phage-like element PBSX protein xkdOUniRef100_P54334Bacillus subtilisXkdO[ Bacillus subtilis ]1257Phage-like element PBSX protein xkdPUniRef100_P54335Bacillus subtilisYqbP[ Bacillus subtilis ]1258Hypothetical protein yqbQ [ BacillusUniRef100_P45950Bacillus subtilisYqbOsubtilis ]1259Hypothetical protein yqbR [ BacillusUniRef100_P45933Bacillus subtilisYqbRsubtilis ]1260Phage-like element PBSX protein xkdSUniRef100_P54338Bacillus subtilisXkdS[ Bacillus subtilis ]1261Hypothetical protein yqbT [ BacillusUniRef100_P45935Bacillus subtilisYqbTsubtilis ]1262Phage-like element PBSX protein xkdUUniRef100_P54340Bacillus subtilisXkdU[ Bacillus subtilis ]12631264XkdV1265YomR126612671268BlyA1269Regulatory protein [ BacillusUniRef100_Q9ZFL9BacillusYdhCstearothermophilus ]stearothermophilus1270Zinc-containing alcohol dehydrogenaseUniRef100_O35045Bacillus subtilisYjmD[ Bacillus subtilis ]1271Mannonate dehydratase 1 [ BacillusUniRef100_Q9KDZ8BacillusUxuAhalodurans ]halodurans1272D-mannonate oxidoreductase [ BacillusUniRef100_Q9KDZ4BacillusYjmFhalodurans ]halodurans1273UPI00002F2634 UniRef100 entryUniRef100_UPI00002F2634YjmD1274Hexuronate transporter [ BacillusUniRef100_O34456Bacillus subtilisExuTsubtilis ]1275Stage II sporulation protein SBUniRef100_O34800Bacillus subtilis[ Bacillus subtilis ]1276Stage II sporulation protein SAUniRef100_O34853Bacillus subtilisSpoIISA[ Bacillus subtilis ]1277UPI00003CC121 UniRef100 entryUniRef100_UPI00003CC121Pit1278Hypothetical UPF0111 protein ykaAUniRef100_O34454Bacillus subtilisYkaA[ Bacillus subtilis ]1279Ggt1280YesL protein [ Bacillus subtilis ]UniRef100_O31515Bacillus subtilisYesL1281YesM protein [ Bacillus subtilis ]UniRef100_O31516Bacillus subtilisYesM1282YesN protein [ Bacillus subtilis ]UniRef100_O31517Bacillus subtilisYesN1283YesO protein [ Bacillus subtilis ]UniRef100_O31518Bacillus subtilisYesO1284Probable ABC transporter permeaseUniRef100_O31519Bacillus subtilisYesPprotein yesP [ Bacillus subtilis ]1285Probable ABC transporter permeaseUniRef100_O31520Bacillus subtilisYesQprotein yesQ [ Bacillus subtilis ]1286YesR protein [ Bacillus subtilis ]UniRef100_O31521Bacillus subtilisYesR1287YesS protein [ Bacillus subtilis ]UniRef100_O31522Bacillus subtilisYesS1288YesT protein [ Bacillus subtilis ]UniRef100_O31523Bacillus subtilisYesT1289YesU1290YesV protein [ Bacillus subtilis ]UniRef100_O31525Bacillus subtilisYesV1291YesW protein [ Bacillus subtilis ]UniRef100_O31526Bacillus subtilisYesW12921293YesT1294YesX protein [ Bacillus subtilis ]UniRef100_O31527Bacillus subtilisYesX1295Putative ion-channel proteinUniRef100_Q8Z4X6Salmonella typhiYccK[ Salmonella typhi ]1296YesY protein [ Bacillus subtilis ]UniRef100_O31528Bacillus subtilisYesY1297YesZ protein [ Bacillus subtilis ]UniRef100_O31529Bacillus subtilisYesZ1298YetA1299Lipoprotein lplA precursor [ BacillusUniRef100_P37966Bacillus subtilisLplAsubtilis ]1300LplB protein [ Bacillus subtilis ]UniRef100_P39128Bacillus subtilisLplB1301LplC protein [ Bacillus subtilis ]UniRef100_P39129Bacillus subtilisLplC1302YkbA protein [ Bacillus subtilis ]UniRef100_O34739Bacillus subtilisYkbA1303YkcA protein [ Bacillus subtilis ]UniRef100_O34689Bacillus subtilisYkcA1304Hypothetical protein [ Bacillus cereus ]UniRef100_Q81CP9Bacillus cereus1305Probable serine protease do-like htrAUniRef100_O34358Bacillus subtilisHtrA[ Bacillus subtilis ]1306Pyrroline-5-carboxylate reductase 3UniRef100_Q00777Bacillus subtilisProG[ Bacillus subtilis ]1307D-aminopeptidase [ Bacillus subtilis ]UniRef100_P26902Bacillus subtilisDppA1308Dipeptide transport system permeaseUniRef100_P26903Bacillus subtilisDppBprotein dppB [ Bacillus subtilis ]1309Dipeptide transport system permeaseUniRef100_P26904Bacillus subtilisDppCprotein dppC [ Bacillus subtilis ]1310Dipeptide transport ATP-bindingUniRef100_P26905Bacillus subtilisDppDprotein dppD [ Bacillus subtilis ]1311Dipeptide-binding protein dppEUniRef100_P26906Bacillus subtilisDppEprecursor [ Bacillus subtilis ]1312Hypothetical protein ykfA [ BacillusUniRef100_O34851Bacillus subtilisYkfAsubtilis ]1313YkfB [ Bacillus subtilis ]UniRef100_O34508Bacillus subtilisYkfB1314YkfC [ Bacillus subtilis ]UniRef100_O35010Bacillus subtilisYkfC1315YkfD [ Bacillus subtilis ]UniRef100_O34480Bacillus subtilisYkfD1316BH1779 protein [ Bacillus halodurans ]UniRef100_Q9KBZ5BacillusYkgAhalodurans1317Putative acyl-CoA thioester hydrolaseUniRef100_P49851Bacillus subtilisYkhAykhA [ Bacillus subtilis ]1318YkjA1319Pectate lyase 47 precursor [ Bacillus sp.UniRef100_Q9AJM4Bacillus sp. TS-PelTS-47]471320Transcriptional regulator, PadR familyUniRef100_Q6HED5Bacillus thuringiensis[ Bacillus thuringiensis ]1321Hypothetical protein OB0568UniRef100_Q8ESQ3Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]1322BH1312 protein [ Bacillus halodurans ]UniRef100_Q9KDA2Bacillus halodurans1323Hypothetical protein ykkA [ BacillusUniRef100_P49854Bacillus subtilisYkkAsubtilis ]1324Hypothetical protein ykkC [ BacillusUniRef100_P49856Bacillus subtilisYkkCsubtilis ]13251326YkkE [ Bacillus subtilis ]UniRef100_O34990Bacillus subtilisYkkE1327Glutamate 5-kinase 1 [ Bacillus subtilis ]UniRef100_P39820Bacillus subtilisProB1328Gamma-glutamyl phosphate reductaseUniRef100_P39821Bacillus subtilisProA[ Bacillus subtilis ]1329Organic hydroperoxide resistanceUniRef100_O34762Bacillus subtilisYklAprotein ohrA [ Bacillus subtilis ]1330Organic hydroperoxide resistanceUniRef100_O34777Bacillus subtilisYkmAtranscriptional regulator [ Bacillussubtilis ]1331Organic hydroperoxide resistanceUniRef100_P80242Bacillus subtilisYkzAprotein ohrB [ Bacillus subtilis ]13321333Guanine deaminase [ Bacillus subtilis ]UniRef100_O34598Bacillus subtilisGuaD1334Phosphoglycerate mutase [ BacillusUniRef100_Q9ALU0BacillusYhfRstearothermophilus ]stearothermophilus1335133613375-methyltetrahydropteroyltriglutamate-UniRef100_P80877Bacillus subtilisMetEhomocysteine methyltransferase[ Bacillus subtilis ]1338Intracellular serine protease [ BacillusUniRef100_Q69DB4Bacillus sp.IspAsp. WRD-2]WRD-213391340YkoK [ Bacillus subtilis ]UniRef100_O34442Bacillus subtilisYkoK13411342Integrase [ Oceanobacillus iheyensis ]UniRef100_Q8ETV2OceanobacillusYdcLiheyensis1343YqaB1344Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81UE0Bacillus anthracis1345YonS13461347Putative HTH-type transcriptionalUniRef100_P45902Bacillus subtilisYqaEregulator yqaE [ Bacillus subtilis ]1348Transcriptional regulatorUniRef100_Q7P886Fusobacterium nucleatum[ Fusobacterium nucleatum subsp.subsp. vincentii ATCC 49256vincentii ATCC 49256]134913501351Lin1236 protein [ Listeria innocua ]UniRef100_Q92CD6Listeria innocua1352135313541355YqaJ135635 protein [Bacteriophage SPP1]UniRef100_Q38143BacteriophageYqaKSPP11357YqaL1358YqaM1359Hypothetical protein yqaO [ BacillusUniRef100_P45912Bacillus subtilissubtilis ]1360Hypothetical protein yopYUniRef100_O64108Bacteriophage SPBc2[Bacteriophage SPBc2]1361136213631364Hypothetical protein CTC02137UniRef100_Q892G2Clostridium[ Clostridium tetani ]tetani1365Hypothetical protein MW1918UniRef100_Q8NVN5StaphylococcusYqaN[ Staphylococcus aureus ]aureus13661367Single-strand binding protein 2 [ ListeriaUniRef100_Q8Y4X1Listeria monocytogenesmonocytogenes ]136813691370Hypothetical protein yqaQ [ BacillusUniRef100_P45948Bacillus subtilisYqaQsubtilis ]13711372Hypothetical protein yqaS [ BacillusUniRef100_P45915Bacillus subtilisYqaSsubtilis ]1373Hypothetical protein yqaT [ BacillusUniRef100_P45916Bacillus subtilisYqaTsubtilis ]1374Hypothetical phage associated proteinUniRef100_Q8K6I0Streptococcus pyogenesSpyM3_1326 [ Streptococcuspyogenes ]1375Minor head structural component GP7UniRef100_O38442Bacteriophage SPP1[Bacteriophage SPP1]1376137713781379Hypothetical protein CTC01553UniRef100_Q894J0Clostridium[ Clostridium tetani ]tetani1380Major capsid protein [BacteriophageUniRef100_Q9T1B7Bacteriophage A118A118]1381ORF28 [Bacteriophage phi-105]UniRef100_Q9ZXF5Bacteriophage phi-1051382138315 protein [Bacteriophage SPP1]UniRef100_Q38584Bacteriophage SPP11384Complete nucleotide sequenceUniRef100_O48446Bacteriophage SPP1[Bacteriophage SPP1]13851386Complete nucleotide sequenceUniRef100_O48448Bacteriophage SPP1[Bacteriophage SPP1]1387Complete nucleotide sequenceUniRef100_O48449Bacteriophage SPP1[Bacteriophage SPP1]13881389Complete nucleotide sequenceUniRef100_O48453Bacteriophage SPP1[Bacteriophage SPP1]13901391Complete nucleotide sequenceUniRef100_O48455BacteriophageXkdO[Bacteriophage SPP1]SPP11392Complete nucleotide sequenceUniRef100_O48459Bacteriophage SPP1[Bacteriophage SPP1]1393Complete nucleotide sequenceUniRef100_O48463Bacteriophage SPP1[Bacteriophage SPP1]139413951396LycA [ Clostridium botulinum ]UniRef100_Q6RI00Clostridium botulinum1397Hypothetical protein yrkC [ BacillusUniRef100_P54430Bacillus subtilisYrkCsubtilis ]1398YhjR1399YdfS protein [ Bacillus subtilis ]UniRef100_P96697Bacillus subtilisYdfS1400HTH-type transcriptional regulator tnrAUniRef100_Q45666Bacillus subtilisTnrA[ Bacillus subtilis ]1401Hypothetical protein ykzB [ BacillusUniRef100_O34923Bacillus subtilissubtilis ]14021403YkoM [ Bacillus subtilis ]UniRef100_O34949Bacillus subtilisYkoM1404YkoU protein [ Bacillus subtilis ]UniRef100_O34398Bacillus subtilisYkoU1405YkoV protein [ Bacillus subtilis ]UniRef100_O34859Bacillus subtilisYkoV1406Signaling protein ykoW [ BacillusUniRef100_O34311Bacillus subtilisYkoWsubtilis ]1407YkoX protein [ Bacillus subtilis ]UniRef100_O34908Bacillus subtilisYkoX1408YkoY protein [ Bacillus subtilis ]UniRef100_O34997Bacillus subtilisYkoY1409RNA polymerase sigma factor [ BacillusUniRef100_O31654Bacillus subtilisSigIsubtilis ]1410YkrI1411Small, acid-soluble spore protein C3UniRef100_P10572Bacillus megaterium[ Bacillus megaterium ]1412YkrK protein [ Bacillus subtilis ]UniRef100_O31656Bacillus subtilisYkrK1413Probable protease htpX homologUniRef100_O31657Bacillus subtilisYkrL[ Bacillus subtilis ]1414YkrM protein [ Bacillus subtilis ]UniRef100_O31658Bacillus subtilisYkrM1415Penicillin-binding protein 3 [ BacillusUniRef100_P42971Bacillus subtilisPbpCsubtilis ]1416Hypothetical protein [ Bacillus cereus ]UniRef100_Q73BI4Bacillus cereus14171418YkrP protein [ Bacillus subtilis ]UniRef100_O31660Bacillus subtilisYkrP1419Two-component sensor histidineUniRef100_O31661Bacillus subtilisKinEkinase [ Bacillus subtilis ]1420Methylated-DNA--protein-cysteineUniRef100_P11742Bacillus subtilisOgtmethyltransferase [ Bacillus subtilis ]14211422Methylthioribose-1-phosphateUniRef100_O31662Bacillus subtilisYkrSisomerase [ Bacillus subtilis ]1423Methylthioribose kinase [ BacillusUniRef100_O31663Bacillus subtilisYkrTsubtilis ]1424YkrU protein [ Bacillus subtilis ]UniRef100_O31664Bacillus subtilisYkrU1425Transaminase mtnE [ Bacillus subtilis ]UniRef100_O31665Bacillus subtilisYkrV14262,3-diketo-5-methylthiopentyl-1-UniRef100_O31666Bacillus subtilisYkrWphosphate enolase [ Bacillus subtilis ]1427Methylthioribulose-1-phosphateUniRef100_O31668Bacillus subtilisYkrYdehydratase [ Bacillus subtilis ]14281,2-dihydroxy-3-keto-5-UniRef100_O31669Bacillus subtilisYkrZmethylthiopentene dioxygenase[ Bacillus subtilis ]1429Metallothiol transferase fosBUniRef100_Q8CXK5OceanobacillusYndN[ Oceanobacillus iheyensis ]iheyensis1430YkvA protein [ Bacillus subtilis ]UniRef100_O31670Bacillus subtilis1431Stage 0 sporulation regulatory proteinUniRef100_P05043Bacillus subtilis[ Bacillus subtilis ]1432Two-component sensor histidineUniRef100_O31671Bacillus subtilisKinDkinase [ Bacillus subtilis ]1433YkvE1434Chemotaxis motB protein [ BacillusUniRef100_P28612Bacillus subtilisMotBsubtilis ]1435Chemotaxis motA protein [ BacillusUniRef100_P28611Bacillus subtilisMotAsubtilis ]1436ATP-dependent Clp protease-likeUniRef100_O31673Bacillus subtilisClpE[ Bacillus subtilis ]1437YkvI protein [ Bacillus subtilis ]UniRef100_O31674Bacillus subtilisYkvI1438YkvJ protein [ Bacillus subtilis ]UniRef100_O31675Bacillus subtilisYkvJ1439YkvK protein [ Bacillus subtilis ]UniRef100_O31676Bacillus subtilisYkvK1440YkvL protein [ Bacillus subtilis ]UniRef100_O31677Bacillus subtilisYkvL1441YkvM protein [ Bacillus subtilis ]UniRef100_O31678Bacillus subtilisYkvM1442DNA integration/recombination proteinUniRef100_Q894H7ClostridiumCodV[ Clostridium tetani ]tetani1443Integrase/recombinase [ Bacillus cereusUniRef100_Q633V7Bacillus cereusRipXZK]ZK1444144514461447YoqV protein [Bacteriophage SPBc2]UniRef100_O64130BacteriophageLigBSPBc2144814491450UPI00003CC586 UniRef100 entryUniRef100_UPI00003CC58614511452145314541455Prophage LambdaBa02, HNHUniRef100_Q81W86Bacillus anthracisendonuclease family protein [ Bacillusanthracis ]1456Terminase small subunitUniRef100_Q6GAL5Staphylococcus aureus[ Staphylococcus aureus ]1457Prophage LambdaBa02, terminase,UniRef100_Q6HUD2Bacillus anthracislarge subunit, putative [ Bacillusanthracis ]1458Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81W89Bacillus anthracis1459ClpP family serine protease, possibleUniRef100_Q97HW4ClostridiumClpPphage related [ Clostridiumacetobutylicumacetobutylicum ]1460Prophage LambdaBa02, major capsidUniRef100_Q81W91Bacillus anthracisprotein, putative [ Bacillus anthracis ]1461Precursor polypeptide (AA-37 to 1647)UniRef100_O03658unidentified bacteriumprecursor [unidentified bacterium]1462Gp7 protein [Bacteriophage phi3626]UniRef100_Q8SBP7Bacteriophage phi36261463Uncharacterized phage related proteinUniRef100_Q97HW7Clostridium acetobutylicum[ Clostridium acetobutylicum ]1464Hypothetical protein CAC1887UniRef100_Q97HW9Clostridium acetobutylicum[ Clostridium acetobutylicum ]1465Prophage LambdaBa02, major tailUniRef100_Q81W97Bacillus anthracisprotein, putative [ Bacillus anthracis ]146614671468Prophage LambdaBa02, tape measureUniRef100_Q81WA0BacillusYqbOprotein, putative [ Bacillus anthracis ]anthracis1469Lin2382 protein [ Listeria innocua ]UniRef100_Q928Z8Listeria innocua1470Protein gp18 [ Listeria monocytogenes ]UniRef100_Q8Y4Z4Listeria monocytogenes1471YclG1472XkdV1473XkdW1474YomP protein [Bacteriophage SPBc2]UniRef100_O64052Bacteriophage SPBc21475Glycerophosphoryl diesterUniRef100_Q737E6Bacillus cereusGlpQphosphodiesterase, putative [ Bacilluscereus ]1476Protein bhlA [Bacteriophage SPBc2]UniRef100_O64039Bacteriophage SPBc21477ORF46 [Bacteriophage phi-105]UniRef100_Q9ZXD7BacteriophageXlyBphi-1051478147914801481Transcriptional regulator, DeoR familyUniRef100_Q816D5Bacillus cereus[ Bacillus cereus ]1482Hypothetical protein yolDUniRef100_O64030Bacteriophage SPBc2[Bacteriophage SPBc2]1483DNAUniRef100_Q81GD4Bacillus cereusYdcLintegration/recombination/invertionprotein [ Bacillus cereus ]1484YkvM protein [ Bacillus subtilis ]UniRef100_O31678Bacillus subtilis1485Response regulator aspartateUniRef100_P40771Bacillus subtilisRapHphosphatase H [ Bacillus subtilis ]1486YoaT [ Bacillus subtilis ]UniRef100_O34535Bacillus subtilisYoaT1487YozG protein [ Bacillus subtilis ]UniRef100_O31834Bacillus subtilis1488YoaS protein [ Bacillus subtilis ]UniRef100_O31833Bacillus subtilisYoaS148914901491149214931494YkvS protein [ Bacillus subtilis ]UniRef100_O31684Bacillus subtilis1495BH2327 protein [ Bacillus halodurans ]UniRef100_Q9KAG0Bacillus halodurans1496YkvT protein [ Bacillus subtilis ]UniRef100_O31685Bacillus subtilisYkvT1497YkvU protein [ Bacillus subtilis ]UniRef100_O31686Bacillus subtilisYkvU1498YkvV protein [ Bacillus subtilis ]UniRef100_O31687Bacillus subtilisYkvV1499YkvW1500YkvY protein [ Bacillus subtilis ]UniRef100_O31689Bacillus subtilisYkvY1501Necrosis and ethylene inducing proteinUniRef100_Q9KFT2Bacillus halodurans[ Bacillus halodurans ]1502Putative HTH-type transcriptionalUniRef100_O31690Bacillus subtilisYkvZregulator ykvZ [ Bacillus subtilis ]1503Transcription antiterminator [ BacillusUniRef100_O06710Bacillus subtilisGlcTsubtilis ]1504PtsG1505Phosphocarrier protein HPr [ BacillusUniRef100_P08877Bacillus subtilissubtilis ]1506Phosphoenolpyruvate-proteinUniRef100_P08838Bacillus subtilisPtsIphosphotransferase [ Bacillus subtilis ]1507SplA [ Bacillus amyloliquefaciens ]UniRef100_O54358Bacillus amyloliquefaciens1508Spore photoproduct lyase [ BacillusUniRef100_O54359BacillusSplBamyloliquefaciens ]amyloliquefaciens1509Hypothetical protein orf1 [ BacillusUniRef100_O05187Bacillus subtilisYkwBsubtilis ]1510Methyl-accepting chemotaxis proteinUniRef100_P54576Bacillus subtilisMcpCmcpC [ Bacillus subtilis ]15113-oxoacyl-(Acyl carrier protein)UniRef100_Q8EMP9OceanobacillusFabGreductase [ Oceanobacillus iheyensis ]iheyensis1512Hypothetical oxidoreductase ykwCUniRef100_O34948Bacillus subtilisYkwC[ Bacillus subtilis ]1513YkwD protein [ Bacillus subtilis ]UniRef100_O31694Bacillus subtilisYkwD1514YkuA protein [ Bacillus subtilis ]UniRef100_O31399Bacillus subtilisYkuA1515Sporulation kinase A [ Bacillus subtilis ]UniRef100_P16497Bacillus subtilisKinA1516Putative aminotransferase A [ BacillusUniRef100_P16524Bacillus subtilisPatAsubtilis ]15171518Hypothetical protein yxaI [ BacillusUniRef100_P42108Bacillus subtilisYxaIsubtilis ]1519YxiO1520Chemotaxis protein cheV [ BacillusUniRef100_P37599Bacillus subtilisCheVsubtilis ]1521Hypothetical protein ykyB [ BacillusUniRef100_P42430Bacillus subtilisYkyBsubtilis ]1522YkuC1523YkuD protein [ Bacillus subtilis ]UniRef100_O34816Bacillus subtilisYkuD1524YkuE1525Hypothetical oxidoreductase ykuFUniRef100_O34717Bacillus subtilisYkuF[ Bacillus subtilis ]1526YkuI protein [ Bacillus subtilis ]UniRef100_O35014Bacillus subtilisYkuI15271528YkuJ protein [ Bacillus subtilis ]UniRef100_O34588Bacillus subtilis1529YkuK protein [ Bacillus subtilis ]UniRef100_O34776Bacillus subtilisYkuK1530Hypothetical protein ykzF [ BacillusUniRef100_O31697Bacillus subtilissubtilis ]1531YkuL protein [ Bacillus subtilis ]UniRef100_O31698Bacillus subtilisYkuL1532Putative HTH-type transcriptionalUniRef100_O34827Bacillus subtilisCcpCregulator ykuM [ Bacillus subtilis ]1533Probable flavodoxin 1 [ Bacillus subtilis ]UniRef100_O34737Bacillus subtilisYkuN1534YkuO protein [ Bacillus subtilis ]UniRef100_O34879Bacillus subtilisYkuO1535Probable flavodoxin 2 [ Bacillus subtilis ]UniRef100_O34589Bacillus subtilisYkuP1536YkuQ protein [ Bacillus subtilis ]UniRef100_O34981Bacillus subtilisYkuQ1537YkuR protein [ Bacillus subtilis ]UniRef100_O34916Bacillus subtilisYkuR1538Hypothetical UPF0180 protein ykuSUniRef100_O34783Bacillus subtilis[ Bacillus subtilis ]1539YkuU protein [ Bacillus subtilis ]UniRef100_O34564Bacillus subtilisYkuU1540YkuV protein [ Bacillus subtilis ]UniRef100_O31403Bacillus subtilisYkuV1541Repressor rok [ Bacillus subtilis ]UniRef100_O34857Bacillus subtilisRok1542YknT protein [ Bacillus subtilis ]UniRef100_O31700Bacillus subtilisYknT1543MobA1544Molybdopterin biosynthesis proteinUniRef100_O31702Bacillus subtilisMoeBMoeB [ Bacillus subtilis ]1545Molybdopterin biosynthesis proteinUniRef100_O31703Bacillus subtilisMoeAMoeA [ Bacillus subtilis ]1546Molybdopterin-guanine dinucleotideUniRef100_O31704Bacillus subtilisMobBbiosynthesis protein B [ Bacillus subtilis ]1547Molybdopterin converting factor, subunitUniRef100_O31705Bacillus subtilisMoaE2 [ Bacillus subtilis ]1548Molybdopterin converting factor,UniRef100_O31706Bacillus subtilissubunit 1 [ Bacillus subtilis ]15491550YknU protein [ Bacillus subtilis ]UniRef100_O31707Bacillus subtilisYknU1551YknV protein [ Bacillus subtilis ]UniRef100_O31708Bacillus subtilisYknV1552Hypothetical protein yknW [ BacillusUniRef100_O31709Bacillus subtilisYknWsubtilis ]1553YknX protein [ Bacillus subtilis ]UniRef100_O31710Bacillus subtilisYknX1554YknY protein [ Bacillus subtilis ]UniRef100_O31711Bacillus subtilisYknY1555Hypothetical protein yknZ [ BacillusUniRef100_O31712Bacillus subtilisYknZsubtilis ]1556FruR15571-phosphofructokinase [ BacillusUniRef100_O31714Bacillus subtilisFruKsubtilis ]1558Phosphotransferase system (PTS)UniRef100_P71012Bacillus subtilisFruAfructose-specific enzyme IIABCcomponent [ Bacillus subtilis ]1559Signal peptidase I T [ Bacillus subtilis ]UniRef100_P71013Bacillus subtilisSipT1560Hypothetical protein ykoA [ BacillusUniRef100_O31715Bacillus subtilissubtilis ]15611562YkpA protein [ Bacillus subtilis ]UniRef100_O31716Bacillus subtilisYkpA1563BH1921 protein [ Bacillus halodurans ]UniRef100_Q9KBK5Bacillus halodurans1564Aminopeptidase ampS [ BacillusUniRef100_P39762Bacillus subtilisAmpSsubtilis ]15651566MreBH protein [ Bacillus subtilis ]UniRef100_P39763Bacillus subtilisMreBH15671568Sporulation kinase C [ Bacillus subtilis ]UniRef100_P39764Bacillus subtilisKinC1569Hypothetical protein ykqB [ BacillusUniRef100_P39760Bacillus subtilisYkqBsubtilis ]1570Adenine deaminase [ Bacillus subtilis ]UniRef100_P39761Bacillus subtilisAdeC1571YkqC1572YkzG protein [ Bacillus subtilis ]UniRef100_O31718Bacillus subtilis1573Hypothetical protein ykrA [ BacillusUniRef100_Q45494Bacillus subtilisYkrAsubtilis ]1574YkrB15751576Hypothetical protein ykyA [ BacillusUniRef100_P21884Bacillus subtilisYkyAsubtilis ]1577Pyruvate dehydrogenase E1UniRef100_P21881Bacillus subtilisPdhAcomponent, alpha subunit [ Bacillussubtilis ]1578Pyruvate dehydrogenase E1UniRef100_P21882Bacillus subtilisPdhBcomponent, beta subunit [ Bacillussubtilis ]1579Dihydrolipoyllysine-residueUniRef100_P21883Bacillus subtilisPdhCacetyltransferase component ofpyruvate dehydrogenase complex[ Bacillus subtilis ]1580Dihydrolipoyl dehydrogenase [ BacillusUniRef100_P21880Bacillus subtilisPdhDsubtilis ]1581UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0691582IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]158315841585Arginine decarboxylase [ BacillusUniRef100_P21885Bacillus subtilisSpeAsubtilis ]1586Hypothetical UPF0223 protein yktAUniRef100_Q45497Bacillus subtilis[ Bacillus subtilis ]1587Hypothetical protein yktB [ BacillusUniRef100_Q45498Bacillus subtilisYktBsubtilis ]1588YkzI protein [ Bacillus subtilis ]UniRef100_O31719Bacillus subtilis1589Inositol-1-monophosphatase [ BacillusUniRef100_Q45499Bacillus subtilisYktCsubtilis ]1590Hypothetical protein ykzC [ BacillusUniRef100_O31720Bacillus subtilisYkzCsubtilis ]1591Hypothetical protein ylaA [ BacillusUniRef100_O07625Bacillus subtilisYlaAsubtilis ]1592Hypothetical protein ylaB [ BacillusUniRef100_O07626Bacillus subtilissubtilis ]1593YlaC protein [ Bacillus subtilis ]UniRef100_O07627Bacillus subtilisYlaC1594Hypothetical protein ylaD [ BacillusUniRef100_O07628Bacillus subtilissubtilis ]1595Hypothetical protein ylaF [ BacillusUniRef100_O07630Bacillus subtilissubtilis ]1596GTP-binding protein typA/bipAUniRef100_O07631Bacillus subtilisYlaGhomolog [ Bacillus subtilis ]1597YlaH protein [ Bacillus subtilis ]UniRef100_O07632Bacillus subtilisYlaH1598YhzA homolog [ Bacillus subtilis ]UniRef100_O07562Bacillus subtilisYhjH1599Hypothetical protein yhjG [ BacillusUniRef100_O07561Bacillus subtilisYhjGsubtilis ]16001601Hypothetical lipoprotein ylaJ precursorUniRef100_O07634Bacillus subtilisYlaJ[ Bacillus subtilis ]1602YlaK protein [ Bacillus subtilis ]UniRef100_O07635Bacillus subtilisYlaK1603UPI00003CB7B1 UniRef100 entryUniRef100_UPI00003CB7B1YlaL1604Probable glutaminase ylaM [ BacillusUniRef100_O07637Bacillus subtilisYlaMsubtilis ]1605YlaN protein [ Bacillus subtilis ]UniRef100_O07638Bacillus subtilis1606Hypothetical protein ylaO [ BacillusUniRef100_O07639Bacillus subtilisFtsWsubtilis ]1607PycA1608Cytochrome AA3 controlling proteinUniRef100_P12946Bacillus subtilisCtaA[ Bacillus subtilis ]1609Protoheme IX farnesyltransferaseUniRef100_P24009Bacillus subtilisCtaB[ Bacillus subtilis ]1610Cytochrome c oxidase polypeptide IIUniRef100_P24011Bacillus subtilisCtaCprecursor (EC 1.9.3.1) (Cytochromeaa3 subunit 2) (Caa-3605 subunit 2)(Oxidase aa(3) subunit 2) [ Bacillussubtilis ]1611Cytochrome c oxidase polypeptide IUniRef100_P24010Bacillus subtilisCtaD(EC 1.9.3.1) (Cytochrome aa3 subunit1) (Caa-3605 subunit 1) (Oxidase aa(3)subunit 1) [ Bacillus subtilis ]1612Cytochrome c oxidase polypeptide IIIUniRef100_P24012Bacillus subtilisCtaE(EC 1.9.3.1) (Cytochrome aa3 subunit3) (Caa-3605 subunit 3) (Oxidase aa(3)subunit 3) [ Bacillus subtilis ]1613Cytochrome c oxidase polypeptide IVBUniRef100_P24013Bacillus subtilisCtaF[ Bacillus subtilis ]1614CtaG protein [ Bacillus subtilis ]UniRef100_O34329Bacillus subtilisCtaG1615YlbA protein [ Bacillus subtilis ]UniRef100_O34743Bacillus subtilisYlbA1616YlbB protein [ Bacillus subtilis ]UniRef100_O34682Bacillus subtilisYlbB1617YlbC protein [ Bacillus subtilis ]UniRef100_O34586Bacillus subtilisYlbC1618YlbD protein [ Bacillus subtilis ]UniRef100_O34880Bacillus subtilisYlbD1619YlbE protein [ Bacillus subtilis ]UniRef100_O34958Bacillus subtilis1620Regulatory protein ylbF [ BacillusUniRef100_O34412Bacillus subtilisYlbFsubtilis ]1621Hypothetical UPF0298 protein ylbGUniRef100_O34658Bacillus subtilis[ Bacillus subtilis ]1622YlbH protein [ Bacillus subtilis ]UniRef100_O34331Bacillus subtilisYlbH1623PhosphopantetheineUniRef100_O34797Bacillus subtilisYlbIadenylyltransferase [ Bacillus subtilis ]1624YlbJ1625YlbL protein [ Bacillus subtilis ]UniRef100_O34470Bacillus subtilisYlbL1626YlbM protein [ Bacillus subtilis ]UniRef100_O34513Bacillus subtilisYlbM1627YlbN protein [ Bacillus subtilis ]UniRef100_O34445Bacillus subtilisYlbN162850S ribosomal protein L32 [ BacillusUniRef100_O34687Bacillus subtilissubtilis ]1629Hypothetical protein ylbO [ BacillusUniRef100_O34549Bacillus subtilisYlbOsubtilis ]1630YlbP protein [ Bacillus subtilis ]UniRef100_O34468Bacillus subtilisYlbP1631Probable 2-dehydropantoate 2-UniRef100_O34661Bacillus subtilisYlbQreductase [ Bacillus subtilis ]1632YllA1633Protein mraZ [ Bacillus subtilis ]UniRef100_P55343Bacillus subtilisYllB1634S-adenosyl-methyltransferase mraWUniRef100_Q07876Bacillus subtilisYlxA[ Bacillus subtilis ]1635FtsL1636Penicillin-binding protein 2B [ BacillusUniRef100_Q07868Bacillus subtilisPbpBsubtilis ]1637Stage V sporulation protein D [ BacillusUniRef100_Q03524Bacillus subtilisSpoVDsubtilis ]1638UDP-N-acetylmuramoylalanyl-D-UniRef100_Q03523Bacillus subtilisMurEglutamate--2,6-diaminopimelate ligase[ Bacillus subtilis ]1639Phospho-N-acetylmuramoyl-UniRef100_Q03521Bacillus subtilisMraYpentapeptide-transferase [ Bacillussubtilis ]1640UDP-N-acetylmuramoylalanine--D-UniRef100_Q03522Bacillus subtilisMurDglutamate ligase [ Bacillus subtilis ]1641Stage V sporulation protein E [ BacillusUniRef100_P07373Bacillus subtilisSpoVEsubtilis ]1642UDP-N-acetylglucosamine--N-UniRef100_P37585Bacillus subtilisMurGacetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase[ Bacillus subtilis ]1643UDP-N-acetylenolpyruvoylglucosamineUniRef100_P18579Bacillus subtilisMurBreductase [ Bacillus subtilis ]1644DivIB1645YlxW1646YlxX1647Sbp1648FtsA1649Cell division protein ftsZ [ BacillusUniRef100_P17865Bacillus subtilisFtsZsubtilis ]1650Bpr1651Bacillopeptidase F precursor [ BacillusUniRef100_P16397Bacillus subtilisBprsubtilis ]1652Sporulation sigma-E factor processingUniRef100_P13801Bacillus subtilisSpoIIGApeptidase [ Bacillus subtilis ]1653RNA polymerase sigma-E factorUniRef100_P06222Bacillus subtilisSigEprecursor [ Bacillus subtilis ]1654RNA polymerase sigma-G factorUniRef100_P19940Bacillus subtilisSigG[ Bacillus subtilis ]1655YlmA protein [ Bacillus subtilis ]UniRef100_O31723Bacillus subtilisYlmA16561657YlmC protein [ Bacillus subtilis ]UniRef100_O31725Bacillus subtilis1658Hypothetical UPF0124 protein ylmDUniRef100_O31726Bacillus subtilisYlmD[ Bacillus subtilis ]1659YlmE1660YlmF protein [ Bacillus subtilis ]UniRef100_O31728Bacillus subtilisYlmF1661YlmG protein [ Bacillus subtilis ]UniRef100_O31729Bacillus subtilis1662Minicell-associated protein [ BacillusUniRef100_P71020Bacillus subtilisYlmHsubtilis ]1663Minicell-associated protein DivIVAUniRef100_P71021Bacillus subtilisDivIVA[ Bacillus subtilis ]1664Isoleucyl-tRNA synthetase [ BacillusUniRef100_Q45477Bacillus subtilisIleSsubtilis ]1665YlyA1666LspA1667Hypothetical pseudouridine synthaseUniRef100_Q45480Bacillus subtilisYlyBylyB [ Bacillus subtilis ]1668PyrR bifunctional protein [Includes:UniRef100_P39765Includes:PyrRPyrimidine operon regulatory protein;PyrimidineUracil phosphoribosyltransferase (ECoperon2.4.2.9) (UPRTase)] [ Bacillus subtilis ]regulatoryprotein; Uracilphosphoribosyltransferase (EC 2.4.2.9)(UPRTase)1669Uracil permease [ Bacillus subtilis ]UniRef100_P39766Bacillus subtilisPyrP1670Aspartate carbamoyltransferaseUniRef100_P05654Bacillus subtilisPyrB[ Bacillus subtilis ]1671Dihydroorotase [ Bacillus subtilis ]UniRef100_P25995Bacillus subtilisPyrC1672Carbamoyl-phosphate synthase,UniRef100_P25993Bacillus subtilisPyrAApyrimidine-specific, small chain[ Bacillus subtilis ]1673Carbamoyl-phosphate synthase,UniRef100_P25994Bacillus subtilisPyrABpyrimidine-specific, large chain[ Bacillus subtilis ]1674Dihydroorotate dehydrogenaseUniRef100_P25983Bacillus subtilisPyrKelectron transfer subunit [ Bacillussubtilis ]1675Dihydroorotate dehydrogenase,UniRef100_P25996Bacillus subtilisPyrDcatalytic subunit [ Bacillus subtilis ]1676Orotidine 5′-phosphate decarboxylaseUniRef100_P25971Bacillus subtilisPyrF[ Bacillus subtilis ]1677Orotate phosphoribosyltransferaseUniRef100_P25972Bacillus subtilisPyrE[ Bacillus subtilis ]16781679CysH1680YlnA protein [ Bacillus subtilis ]UniRef100_O34734Bacillus subtilisCysP1681Sulfate adenylyltransferase [ BacillusUniRef100_O34764Bacillus subtilisSatsubtilis ]1682Probable adenylyl-sulfate kinaseUniRef100_O34577Bacillus subtilisCysC[ Bacillus subtilis ]1683Putative S-adenosyl L-methionine:UniRef100_O34744Bacillus subtilisYlnDuroporphyrinogen III methyltransferase[ Bacillus subtilis ]1684Sirohydrochlorin ferrochelataseUniRef100_O34632Bacillus subtilisYlnE[ Bacillus subtilis ]1685YlnF protein [ Bacillus subtilis ]UniRef100_O34813Bacillus subtilisYlnF1686Putative fibronectin-binding proteinUniRef100_O34693Bacillus subtilisYloA[ Bacillus subtilis ]1687YloB protein [ Bacillus subtilis ]UniRef100_O34431Bacillus subtilisYloB1688YloC protein [ Bacillus subtilis ]UniRef100_O34441Bacillus subtilisYloC1689Hypothetical UPF0296 protein ylzAUniRef100_Q7WY72Bacillus subtilis[ Bacillus subtilis ]1690Guanylate kinase [ Bacillus subtilis ]UniRef100_O34328Bacillus subtilisGmk1691DNA-directed RNA polymerase omegaUniRef100_O35011Bacillus subtilischain [ Bacillus subtilis ]1692YloI protein [ Bacillus subtilis ]UniRef100_O35033Bacillus subtilisYloI1693Primosomal protein N′ [ Bacillus subtilis ]UniRef100_P94461Bacillus subtilisPriA1694Peptide deformylase 1 [ BacillusUniRef100_P94462Bacillus subtilisDefsubtilis ]1695Methionyl-tRNA formyltransferaseUniRef100_P94463Bacillus subtilisFmt[ Bacillus subtilis ]1696Ribosomal RNA small subunitUniRef100_P94464Bacillus subtilisYloMmethyltransferase B (EC 2.1.1.—) (rRNA(cytosine-C(5)-)-methyltransferase)[ Bacillus subtilis ]1697Hypothetical UPF0063 protein yloNUniRef100_O34617Bacillus subtilisYloN[ Bacillus subtilis ]1698Protein phosphatase [ Bacillus subtilis ]UniRef100_O34779Bacillus subtilisPrpC1699Probable serine/threonine-proteinUniRef100_O34507Bacillus subtilisPrkCkinase yloP [ Bacillus subtilis ]1700Probable GTPase engC [ BacillusUniRef100_O34530Bacillus subtilisYloQsubtilis ]1701Ribulose-phosphate 3-epimeraseUniRef100_O34557Bacillus subtilisRpe[ Bacillus subtilis ]1702YloS protein [ Bacillus subtilis ]UniRef100_O34664Bacillus subtilisYloS1703170450S ribosomal protein L28 [ BacillusUniRef100_P37807Bacillus subtilissubtilis ]1705Hypothetical protein yloU [ BacillusUniRef100_O34318Bacillus subtilisYloUsubtilis ]1706YloV1707Probable L-serine dehydratase, betaUniRef100_O34635Bacillus subtilisSdaABchain [ Bacillus subtilis ]1708Probable L-serine dehydratase, alphaUniRef100_O34607Bacillus subtilisSdaAAchain [ Bacillus subtilis ]1709ATP-dependent DNA helicase recGUniRef100_O34942Bacillus subtilisRecG[ Bacillus subtilis ]1710Transcription factor fapR [ BacillusUniRef100_O34835Bacillus subtilisYlpCsubtilis ]1711Fatty acid/phospholipid synthesisUniRef100_P71018Bacillus subtilisPlsXprotein plsX [ Bacillus subtilis ]1712Malonyl CoA-acyl carrier proteinUniRef100_P71019Bacillus subtilisFabDtransacylase [ Bacillus subtilis ]17133-oxoacyl-[acyl-carrier-protein]UniRef100_P51831acyl-carrier-FabGreductase [ Bacillus subtilis ]protein1714Acyl carrier protein [ Bacillus subtilis ]UniRef100_P80643Bacillus subtilis1715Rnc1716Chromosome partition protein smcUniRef100_P51834Bacillus subtilisSmc[ Bacillus subtilis ]1717FtsY17181719Signal recognition particle proteinUniRef100_P37105Bacillus subtilisFfh[ Bacillus subtilis ]172030S ribosomal protein S16 [ BacillusUniRef100_P21474Bacillus subtilissubtilis ]17211722YlqD protein [ Bacillus subtilis ]UniRef100_O31739Bacillus subtilisYlqD1723RimM1724TrmD172550S ribosomal protein L19 [ BacillusUniRef100_O31742Bacillus subtilisRplSsubtilis ]1726YlqF protein [ Bacillus subtilis ]UniRef100_O31743Bacillus subtilisYlqF1727Ribonuclease HII [ Bacillus subtilis ]UniRef100_O31744Bacillus subtilisRnhB1728YlqG protein [ Bacillus subtilis ]UniRef100_O31745Bacillus subtilisYlqG1729YlqH protein [ Bacillus subtilis ]UniRef100_O34867Bacillus subtilis1730Succinyl-CoA synthetase beta chainUniRef100_P80886Bacillus subtilisSucC[ Bacillus subtilis ]1731Succinyl-CoA synthetase alpha chainUniRef100_P80865Bacillus subtilisSucD[ Bacillus subtilis ]1732Smf1733TopA1734Protein gid [ Bacillus subtilis ]UniRef100_P39815Bacillus subtilisGid1735Tyrosine recombinase xerC [ BacillusUniRef100_P39776Bacillus subtilisCodVsubtilis ]1736ATP-dependent protease hslVUniRef100_P39070Bacillus subtilisClpQprecursor [ Bacillus subtilis ]1737ATP-dependent hsl protease ATP-UniRef100_P39778Bacillus subtilisClpYbinding subunit hslU [ Bacillus subtilis ]1738GTP-sensing transcriptional pleiotropicUniRef100_P39779Bacillus subtilisCodYrepressor codY [ Bacillus subtilis ]1739Flagellar basal-body rod protein flgBUniRef100_P24500Bacillus subtilisFlgB[ Bacillus subtilis ]1740Flagellar basal-body rod protein flgCUniRef100_P24501Bacillus subtilisFlgC[ Bacillus subtilis ]1741Flagellar hook-basal body complexUniRef100_P24502Bacillus subtilisFliEprotein fliE [ Bacillus subtilis ]1742Flagellar M-ring protein [ BacillusUniRef100_P23447Bacillus subtilisFliFsubtilis ]1743Flagellar motor switch protein fliGUniRef100_P23448Bacillus subtilisFliG[ Bacillus subtilis ]1744Probable flagellar assembly protein fliHUniRef100_P23449Bacillus subtilisFliH[ Bacillus subtilis ]1745Flagellum-specific ATP synthaseUniRef100_P23445Bacillus subtilisFliI[ Bacillus subtilis ]1746Flagellar fliJ protein [ Bacillus subtilis ]UniRef100_P20487Bacillus subtilisFliJ1747FlaA locus 22.9 kDa protein [ BacillusUniRef100_P23454Bacillus subtilisYlxFsubtilis ]1748Probable flagellar hook-length controlUniRef100_P23451Bacillus subtilisFliKprotein [ Bacillus subtilis ]1749FlaA locus hypothetical protein ylxGUniRef100_P23455Bacillus subtilisYlxG[ Bacillus subtilis ]1750FlgE1751BH2448 protein [ Bacillus halodurans ]UniRef100_Q9KA42Bacillus halodurans1752Flagellar fliL protein [ Bacillus subtilis ]UniRef100_P23452Bacillus subtilisFliL1753Flagellar motor switch protein fliMUniRef100_P23453Bacillus subtilisFliM[ Bacillus subtilis ]1754Flagellar motor switch protein fliYUniRef100_P24073Bacillus subtilisFliY[ Bacillus subtilis ]1755Chemotaxis protein cheY homologUniRef100_P24072Bacillus subtilisCheY[ Bacillus subtilis ]1756Flagellar biosynthetic protein fliZUniRef100_P35536Bacillus subtilisFliZprecursor [ Bacillus subtilis ]1757Flagellar biosynthetic protein fliPUniRef100_P35528Bacillus subtilisFliP[ Bacillus subtilis ]1758Flagellar biosynthetic protein fliQUniRef100_P35535Bacillus subtilis[ Bacillus subtilis ]1759Flagellar biosynthetic protein fliRUniRef100_P35537Bacillus subtilisFliR[ Bacillus subtilis ]1760Flagellar biosynthetic protein flhBUniRef100_P35538Bacillus subtilisFlhB[ Bacillus subtilis ]1761Flagellar biosynthesis protein flhAUniRef100_P35620Bacillus subtilisFlhA[ Bacillus subtilis ]1762Flagellar biosynthesis protein flhFUniRef100_Q01960Bacillus subtilisFlhF[ Bacillus subtilis ]1763Hypothetical protein ylxH [ BacillusUniRef100_P40742Bacillus subtilisYlxHsubtilis ]1764Chemotaxis response regulatorUniRef100_Q05522Bacillus subtilisCheBprotein-glutamate methylesterase[ Bacillus subtilis ]1765Chemotaxis protein cheA [ BacillusUniRef100_P29072Bacillus subtilisCheAsubtilis ]1766Chemotaxis protein cheW [ BacillusUniRef100_P39802Bacillus subtilisCheWsubtilis ]1767Chemotaxis protein cheC [ BacillusUniRef100_P40403Bacillus subtilisCheCsubtilis ]1768Chemotaxis protein cheD [ BacillusUniRef100_P40404Bacillus subtilisCheDsubtilis ]1769RNA polymerase sigma-D factorUniRef100_P10726Bacillus subtilisSigD[ Bacillus subtilis ]1770Swarming motility protein swrBUniRef100_P40405Bacillus subtilisYlxL[ Bacillus subtilis ]177130S ribosomal protein S2 [ BacillusUniRef100_P21464Bacillus subtilisRpsBsubtilis ]1772Translation elongation factor TsUniRef100_Q65JJ8Bacillus cereusTsf[ Bacillus cereus ]1773PyrH1774Frr1775Undecaprenyl pyrophosphateUniRef100_O31751Bacillus subtilisUppSsynthetase [ Bacillus subtilis ]1776Phosphatidate cytidylyltransferaseUniRef100_O31752Bacillus subtilisCdsA[ Bacillus subtilis ]17771-deoxy-D-xylulose 5-phosphateUniRef100_O31753Bacillus subtilisDxrreductoisomerase [ Bacillus subtilis ]1778Hypothetical zinc metalloprotease ylucUniRef100_O31754Bacillus subtilisYluC[ Bacillus subtilis ]1779Prolyl-tRNA synthetase [ BacillusUniRef100_O31755Bacillus subtilisProSsubtilis ]1780DNA polymerase III polC-type [ BacillusUniRef100_P13267Bacillus subtilisPolCsubtilis ]17811782Cellulose 1,4-beta-cellobiosidaseUniRef100_Q8KKF7Paenibacillus sp. BP-23precursor [ Paenibacillus sp. BP-23]1783Endoglucanase B precursorUniRef100_P23550Paenibacillus lautus[ Paenibacillus lautus ]1784Beta-mannosidase [ ThermotogaUniRef100_Q9RIK7Thermotoga neapolitananeapolitana ]1785Hypothetical UPF0090 protein ylxSUniRef100_P32726Bacillus subtilisYlxS[ Bacillus subtilis ]1786Transcription elongation protein nusAUniRef100_P32727Bacillus subtilisNusA[ Bacillus subtilis ]1787Hypothetical protein ylxR [ BacillusUniRef100_P32728Bacillus subtilissubtilis ]1788Probable ribosomal protein ylxQUniRef100_P32729Bacillus subtilis[ Bacillus subtilis ]1789Translation initiation factor IF-2UniRef100_P17889Bacillus subtilisInfB[ Bacillus subtilis ]1790Hypothetical protein ylxP [ BacillusUniRef100_P32730Bacillus subtilissubtilis ]1791Ribosome-binding factor A [ BacillusUniRef100_P32731Bacillus subtilisRbfAsubtilis ]1792TruB1793Riboflavin biosynthesis protein ribCUniRef100_P54575Includes:RibC[Includes: Riboflavin kinase (ECRiboflavin kinase2.7.1.26) (Flavokinase); FMN(EC 2.7.1.26)adenylyltransferase (EC 2.7.7.2) (FAD(Flavokinase);pyrophosphorylase) (FAD synthetase)]FMN[ Bacillus subtilis ]adenylyltransferase(EC 2.7.7.2)(FADpyrophosphorylase)(FADsynthetase)179430S ribosomal protein S15 [ BacillusUniRef100_P21473Bacillus subtilissubtilis ]1795PolyribonucleotideUniRef100_P50849Bacillus subtilisPnpAnucleotidyltransferase [ Bacillus subtilis ]1796Hypothetical protein ylxY precursorUniRef100_P50850Bacillus subtilisYlxY[ Bacillus subtilis ]1797Hypothetical zinc protease ymxGUniRef100_Q04805Bacillus subtilisMlpA[ Bacillus subtilis ]1798Hypothetical protein ymxH [ BacillusUniRef100_Q04811Bacillus subtilissubtilis ]1799Dipicolinate synthase, A chain [ BacillusUniRef100_Q04809Bacillus subtilisSpoVFAsubtilis ]1800Dipicolinate synthase, B chain [ BacillusUniRef100_Q04810Bacillus subtilisSpoVFBsubtilis ]1801Aspartate-semialdehydeUniRef100_Q04797Bacillus subtilisAsddehydrogenase [ Bacillus subtilis ]1802Aspartokinase 1 (EC 2.7.2.4)UniRef100_Q04795Contains:DapG(Aspartokinase I) (Aspartate kinase 1)Aspartokinase I[Contains: Aspartokinase I alphaalpha subunit;subunit; Aspartokinase I beta subunit]Aspartokinase I[ Bacillus subtilis ]beta subunit1803Dihydrodipicolinate synthase [ BacillusUniRef100_Q04796Bacillus subtilisDapAsubtilis ]1804YmfA protein [ Bacillus subtilis ]UniRef100_O31760Bacillus subtilisYmfA1805Translocation-enhancing protein tepAUniRef100_Q99171Bacillus subtilisTepA[ Bacillus subtilis ]18061807DNA translocase ftsK [ Bacillus subtilis ]UniRef100_P21458Bacillus subtilisSpoIIIE1808Hypothetical transcriptional regulatorUniRef100_O31761Bacillus subtilisYmfCymfC [ Bacillus subtilis ]1809Multidrug resistance protein [ BacillusUniRef100_Q9K7Q2BacillusYitGhalodurans ]halodurans1810Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81WP6BacillusYmfGanthracis1811YmfH protein [ Bacillus subtilis ]UniRef100_O31766Bacillus subtilisYmfH181218131814YmfJ protein [ Bacillus subtilis ]UniRef100_O31768Bacillus subtilis1815Hypothetical protein [ Bacillus cereusUniRef100_Q636P2Bacillus cereusYmfKZK]ZK1816YmfM1817CDP-diacylglycerol--glycerol-3-UniRef100_P46322Bacillus subtilisPgsAphosphate 3-phosphatidyltransferase[ Bacillus subtilis ]1818CinA-like protein [ Bacillus subtilis ]UniRef100_P46323Bacillus subtilisCinA1819RecA protein [ BacillusUniRef100_Q8GJG2BacillusRecAamyloliquefaciens ]amyloliquefaciens1820Hypothetical UPF0144 protein ymdAUniRef100_O31774Bacillus subtilisYmdA[ Bacillus subtilis ]1821YmdB protein [ Bacillus subtilis ]UniRef100_O31775Bacillus subtilisYmdB1822Stage V sporulation protein S [ BacillusUniRef100_P45693Bacillus subtilissubtilis ]182318241825L-threonine 3-dehydrogenase [ BacillusUniRef100_O31776Bacillus subtilisTdhsubtilis ]18262-amino-3-ketobutyrate coenzyme AUniRef100_O31777Bacillus subtilisKblligase [ Bacillus subtilis ]1827Hypothetical UPF0004 protein ymcBUniRef100_O31778Bacillus subtilisYmcB[ Bacillus subtilis ]1828YmcA protein [ Bacillus subtilis ]UniRef100_O31779Bacillus subtilisYmcA1829Spore coat protein E [ Bacillus subtilis ]UniRef100_P14016Bacillus subtilisCotE1830MutS1831DNA mismatch repair protein mutLUniRef100_P49850Bacillus subtilisMutL[ Bacillus subtilis ]1832YjcS protein [ Bacillus subtilis ]UniRef100_O31641Bacillus subtilis1833YxiD183418351836All1751 protein [ Anabaena sp.]UniRef100_Q8YW65Anabaena sp.YciC1837BH0367 protein [ Bacillus halodurans ]UniRef100_Q9KFV4Bacillus halodurans1838Phosphinothricin N-acetyltransferaseUniRef100_Q9KFP5BacillusYwnH[ Bacillus halodurans ]halodurans1839UPI00003CC0D8 UniRef100 entryUniRef100_UPI00003CC0D818401841Putative L-amino acid oxidase [ BacillusUniRef100_O34363Bacillus subtilisYobNsubtilis ]1842YoaK1843Na+/H+ antiporter [ Bacillus halodurans ]UniRef100_Q9K5Q0BacillusYvgPhalodurans1844Aromatic hydrocarbon catabolismUniRef100_Q8CV32Oceanobacillus iheyensisprotein [ Oceanobacillus iheyensis ]1845Hypothetical UPF0145 protein VP1283UniRef100_Q87Q67Vibrio parahaemolyticus[ Vibrio parahaemolyticus ]1846Hypothetical protein yqeD [ BacillusUniRef100_P54449Bacillus subtilisYqeDsubtilis ]1847Penicillin-binding protein, putativeUniRef100_Q738U9Bacillus cereusPbpE[ Bacillus cereus ]1848Hypothetical glycosyl transferaseUniRef100_O34539Bacillus subtilisYjiC[ Bacillus subtilis ]1849Asparate-proton symporter [ BacillusUniRef100_O07002Bacillus subtilisYveAsubtilis ]1850Spore coat protein [ BacillusUniRef100_Q9KEV6Bacillus haloduranshalodurans ]18511852YdhD1853Putative HTH-type transcriptionalUniRef100_Q7WY76Bacillus subtilisYezEregulator yezE [ Bacillus subtilis ]1854Hypothetical protein yesE [ BacillusUniRef100_O31511Bacillus subtilisYesEsubtilis ]1855YesF protein [ Bacillus subtilis ]UniRef100_O31512Bacillus subtilisYesF1856UPI00003CBA3B UniRef100 entryUniRef100_UPI00003CBA3B1857YmaD protein [ Bacillus subtilis ]UniRef100_O31790Bacillus subtilisYmaD1858Multidrug resistance protein ebrBUniRef100_O31791Bacillus subtilisEbrB[ Bacillus subtilis ]1859Multidrug resistance protein ebrAUniRef100_O31792Bacillus subtilisEbrA[ Bacillus subtilis ]18601861Hypothetical protein ymaF [ BacillusUniRef100_O31794Bacillus subtilisYmaFsubtilis ]1862tRNA delta(2)-UniRef100_O31795Bacillus subtilisMiaAisopentenylpyrophosphate transferase[ Bacillus subtilis ]1863Hfq protein [ Bacillus subtilis ]UniRef100_O31796Bacillus subtilis1864Hypothetical protein ymzA [ BacillusUniRef100_O31798Bacillus subtilissubtilis ]1865NrdI protein [ Bacillus subtilis ]UniRef100_P50618Bacillus subtilisYmaA1866Ribonucleoside-diphosphate reductaseUniRef100_P50620Bacillus subtilisNrdEalpha chain [ Bacillus subtilis ]1867Ribonucleoside-diphosphate reductaseUniRef100_P50621Bacillus subtilisNrdFbeta chain [ Bacillus subtilis ]1868Hypothetical protein ymaB [ BacillusUniRef100_P50619Bacillus subtilisYmaBsubtilis ]1869Blr6966 protein [ BradyrhizobiumUniRef100_Q89EV4BradyrhizobiumYtnPjaponicum]japonicum1870Nitrogen fixation protein [ BacillusUniRef100_Q9KFV2BacillusYurVhalodurans ]halodurans1871Transcription regulator Fur family-likeUniRef100_Q8CNQ7StaphylococcusPerRprotein [ Staphylococcus epidermidis ]epidermidis1872UPI00003CB681 UniRef100 entryUniRef100_UPI00003CB681YdhC1873Hypothetical protein [ Bacillus cereus ]UniRef100_Q81C60Bacillus cereusYjlA1874CwlC1875Membrane protein, putative [ ListeriaUniRef100_Q720L9Listeria monocytogenesmonocytogenes ]1876Lin1174 protein [ Listeria innocua ]UniRef100_Q92CJ7Listeria innocua187718781879Transcriptional regulator [ AquifexUniRef100_O66635Aquifex aeolicusYdgCaeolicus ]1880Hypothetical membrane-anchoredUniRef100_Q92VA1Rhizobium melilotiprotein [ Rhizobium meliloti ]1881Cytosine permease [ BacillusUniRef100_Q9KBP3BacillusYxlAhalodurans ]halodurans1882AgaF [ Agrobacterium tumefaciens ]UniRef100_O50265Agrobacterium tumefaciens18831884Hydantoin utilization protein BUniRef100_Q88H51Pseudomonas putida[ Pseudomonas putida ]1885Hypothetical protein SMb20139UniRef100_Q92X23Rhizobium meliloti[ Rhizobium meliloti ]1886BH2340 protein [ Bacillus halodurans ]UniRef100_Q9KAE7Bacillus halodurans188718881889Stage V sporulation protein K [ BacillusUniRef100_P27643Bacillus subtilisSpoVKsubtilis ]1890YnbA [ Bacillus subtilis ]UniRef100_P94478Bacillus subtilisYnbA1891YnbB [ Bacillus subtilis ]UniRef100_P94479Bacillus subtilisYnbB1892HTH-type transcriptional regulator glnRUniRef100_P37582Bacillus subtilisGlnR[ Bacillus subtilis ]1893Glutamine synthetase [ Bacillus subtilis ]UniRef100_P12425Bacillus subtilisGlnA18941895Hypothetical protein CAC3435UniRef100_Q97DN7Clostridium acetobutylicum[ Clostridium acetobutylicum ]189618971898Hypothetical protein CAC0350UniRef100_Q97M50Clostridium acetobutylicum[ Clostridium acetobutylicum ]1899Hypothetical HIT-like protein MJ0866UniRef100_Q58276MethanococcusHit[ Methanococcus jannaschii ]jannaschii1900Hypothetical protein [ Bacillus anthracis ]UniRef100_Q6I2B3Bacillus anthracis1901Hypothetical protein [ Bacillus cereus ]UniRef100_Q81CM1Bacillus cereusYdjC19021903Methyltransferase [ Bacillus cereus ]UniRef100_Q81CJ2Bacillus cereus1904YoaO1905Acetyltransferase, GNAT familyUniRef100_Q737B4Bacillus cereus[ Bacillus cereus ]1906Repressor rok [ Bacillus subtilis ]UniRef100_O34857Bacillus subtilisRok19071908Hypothetical protein [BacteriophageUniRef100_Q6QGK2Bacteriophage T5T5]1909Hypothetical protein yvdT [ BacillusUniRef100_O07001Bacillus subtilisYvdTsubtilis ]1910Hypothetical protein yvdS [ BacillusUniRef100_O32262Bacillus subtilisYvdSsubtilis ]1911Hypothetical protein yvdR [ BacillusUniRef100_O06999Bacillus subtilisYvdRsubtilis ]1912Spermidine N1-acetyltransferaseUniRef100_Q72Y03Bacillus cereusYoaA[ Bacillus cereus ]1913Hypothetical Membrane AssociatedUniRef100_Q812L6Bacillus cereusProtein [ Bacillus cereus ]1914Hypothetical protein yoaW precursorUniRef100_O34541Bacillus subtilisYoaW[ Bacillus subtilis ]1915Thiol-disulfide oxidoreductase resAUniRef100_Q9KCJ4BacillusResA[ Bacillus halodurans ]halodurans1916Manganese-containing catalaseUniRef100_Q9KAU6BacillusYdbD[ Bacillus halodurans ]halodurans1917BH1562 protein [ Bacillus halodurans ]UniRef100_Q9KCK9Bacillus halodurans1918Acetyltransferase, GNAT familyUniRef100_Q739K0Bacillus cereusYjcK[ Bacillus cereus ]1919Hypothetical conserved proteinUniRef100_Q8ELR7Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]19201921Transcriptional regulator, MarR familyUniRef100_Q81BM5Bacillus cereusYkvE[ Bacillus cereus ]1922Putative NAD(P)H nitroreductase ydfNUniRef100_P96692Bacillus subtilisYdfN[ Bacillus subtilis ]1923YdfO protein [ Bacillus subtilis ]UniRef100_P96693Bacillus subtilisYdfO1924Hypothetical protein [ Bacillus cereusUniRef100_Q630S7Bacillus cereusYwrFZK]ZK1925BH1010 protein [ Bacillus halodurans ]UniRef100_Q9KE48BacillusYhcBhalodurans1926ORF28 [ Staphylococcus phage K]UniRef100_Q6Y7T8Staphylococcus phage K19271928Thymidylate synthase [BacteriophageUniRef100_P07606BacteriophageThyAphi-3T]phi-3T1929Sporulation-specific extracellularUniRef100_P42983Bacillus subtilisNucBnuclease precursor [ Bacillus subtilis ]1930LexA repressor [ Bacillus subtilis ]UniRef100_P31080Bacillus subtilisLexA1931YneA [ Bacillus subtilis ]UniRef100_Q45056Bacillus subtilisYneA1932YneB [ Bacillus subtilis ]UniRef100_Q45057Bacillus subtilisYneB1933Hypothetical UPF0291 protein ynzCUniRef100_O31818Bacillus subtilis[ Bacillus subtilis ]1934Transketolase [ Bacillus subtilis ]UniRef100_P45694Bacillus subtilisTkt1935Hypothetical protein yneE [ BacillusUniRef100_P45707Bacillus subtilisYneEsubtilis ]1936Hypothetical UPF0154 protein yneFUniRef100_P45708Bacillus subtilis[ Bacillus subtilis ]19371938Cytochrome c-type biogenesis proteinUniRef100_P45706Bacillus subtilisCcdAccdA [ Bacillus subtilis ]1939CcdB protein [ Bacillus subtilis ]UniRef100_P45709Bacillus subtilisYneI1940CcdC protein [ Bacillus subtilis ]UniRef100_P45710Bacillus subtilisYneJ1941Hypothetical protein yneK [ BacillusUniRef100_P45711Bacillus subtilisYneKsubtilis ]1942Spore coat protein M [ Bacillus subtilis ]UniRef100_Q45058Bacillus subtilisCotM194319441945CitB1946YneN protein [ Bacillus subtilis ]UniRef100_O31820Bacillus subtilisYneN194719481949Small, acid-soluble spore protein tlpUniRef100_Q45060Bacillus subtilis[ Bacillus subtilis ]1950YneP [ Bacillus subtilis ]UniRef100_Q45061Bacillus subtilisYneP1951YneQ [ Bacillus subtilis ]UniRef100_Q45062Bacillus subtilis1952Hypothetical protein [ Bacillus cereus ]UniRef100_Q815P1Bacillus cereus1953Conserved domain protein [ BacillusUniRef100_Q72YR7Bacillus cereuscereus ]1954YneR [ Bacillus subtilis ]UniRef100_Q45063Bacillus subtilis1955Hypothetical UPF0078 protein yneSUniRef100_Q45064Bacillus subtilisYneS[ Bacillus subtilis ]1956YneT [ Bacillus subtilis ]UniRef100_Q45065Bacillus subtilisYneT1957Topoisomerase IV subunit B [ BacillusUniRef100_Q59192Bacillus subtilisParEsubtilis ]1958Topoisomerase IV subunit A [ BacillusUniRef100_Q45066Bacillus subtilisParCsubtilis ]1959AraR1960Hypothetical conserved proteinUniRef100_Q8EMP2OceanobacillusXylB[ Oceanobacillus iheyensis ]iheyensis1961L-ribulose-5-phosphate 4-epimeraseUniRef100_Q8EMP3OceanobacillusAraD[ Oceanobacillus iheyensis ]iheyensis1962L-arabinose isomeraseUniRef100_Q8EMP4OceanobacillusAraA[ Oceanobacillus iheyensis ]iheyensis1963YwtG1964FabG1965Hypothetical protein ynfC [ BacillusUniRef100_Q45067Bacillus subtilisYnfCsubtilis ]1966Amino acid carrier protein alsTUniRef100_Q45068Bacillus subtilisAlsT[ Bacillus subtilis ]1967NarI1968NarJ1969NarH1970NarG19711972Hypothetical protein yqfB [ LactococcusUniRef100_Q9CF70Lactococcus lactislactis ]1973AlbA1974ArfM1975YwiC1976Transcriptional regulator of anaerobicUniRef100_Q9KG81BacillusFnrgenes [ Bacillus halodurans ]halodurans1977Nitrite extrusion protein [ BacillusUniRef100_P46907Bacillus subtilisNarKsubtilis ]19781979CAMP-binding domains-CataboliteUniRef100_Q8R5P4ThermoanaerobacterFnrgene activator and regulatory subunittengcongensisof cAMP-dependent protein kinases[ Thermoanaerobacter tengcongensis ]1980Putative nitric oxide reductaseUniRef100_Q6GK48Staphylococcus aureus[ Staphylococcus aureus ]19811982YngL1983BglC1984Hypothetical protein ynfE [ BacillusUniRef100_Q45069Bacillus subtilissubtilis ]1985Hypothetical protein [ BacillusUniRef100_Q9ZF48BacillusYkkBmegaterium ]megaterium1986Hypothetical protein [ BacillusUniRef100_Q70K06Bacillus amyloliquefaciensamyloliquefaciens]1987Alkyl hydroperoxide reductase largeUniRef100_Q9Z9W3BacillusAhpFsubunit [ Bacillus halodurans ]halodurans1988Methyltransferase [ MethanosarcinaUniRef100_Q8PU82Methanosarcina mazeimazei ]1989Similar to B. subtilis ywgB geneUniRef100_Q9Z9W2BacillusYwgB[ Bacillus halodurans ]halodurans1990Hypothetical protein ywoF [ BacillusUniRef100_P94576Bacillus subtilisYwoFsubtilis ]1991Branched-chain amino acid transportUniRef100_P94499Bacillus subtilisBrnQsystem carrier protein brnQ [ Bacillussubtilis ]1992NADP-dependent alcoholUniRef100_O06007Bacillus subtilisAdhAdehydrogenase [ Bacillus subtilis ]1993Transcriptional regulator, MerR familyUniRef100_Q721Z3ListeriaYraB[ Listeria monocytogenes ]monocytogenes1994HPr-like protein crh [ Bacillus subtilis ]UniRef100_O06976Bacillus subtilis1995BH2089 protein [ Bacillus halodurans ]UniRef100_Q9Z9R4BacillusYddRhalodurans19961997Enoyl-CoA hydratase/isomerase familyUniRef100_Q738L0Bacillus cereusYngFprotein [ Bacillus cereus ]1998Hypothetical protein ysiB [ BacillusUniRef100_P94549Bacillus subtilisYsiBsubtilis ]1999Methylmalonic acid semialdehydeUniRef100_Q63BL0Bacillus cereusMmsAdehydrogenase [ Bacillus cereus ZK]ZK20003-hydroxyisobutyrate dehydrogenaseUniRef100_Q63BL1Bacillus cereusYkwC[ Bacillus cereus ZK]ZK2001Acyl-CoA dehydrogenase [ BacillusUniRef100_Q81DR7Bacillus cereusYusJcereus ]2002Mannose-6-phosphate isomeraseUniRef100_O31646Bacillus subtilisManA[ Bacillus subtilis ]2003Phosphotransferase system (PTS)UniRef100_O31645Bacillus subtilisManPmannose-specific enzyme IIBCAcomponent [ Bacillus subtilis ]200420052006Hypothetical protein [ Bacillus cereus ]UniRef100_Q72YT6Bacillus cereus2007Transcriptional regulator [ BacillusUniRef100_O31644Bacillus subtilisManRsubtilis ]20082009UPI00003CC220 UniRef100 entryUniRef100_UPI00003CC220YtrB2010Transcriptional regulator [ BacillusUniRef100_Q9KF35BacillusYtrAhalodurans ]halodurans2011Probable oxidoreductase [ ClostridiumUniRef100_Q8XP17ClostridiumYjmFperfringens ]perfringens2012Mannonate dehydratase [ ClostridiumUniRef100_Q8XP15ClostridiumUxuAperfringens ]perfringens2013Glucosidase [ Bacillus halodurans ]UniRef100_Q9KEZ5Bacillus halodurans2014C4-dicarboxylate transport systemUniRef100_Q9KEZ6Bacillus halodurans[ Bacillus halodurans ]2015C4-dicarboxylate transport systemUniRef100_Q8EMM5Oceanobacillus iheyensispermease small protein[ Oceanobacillus iheyensis ]2016C4-dicarboxylate transport systemUniRef100_Q9KEZ8BacillusDctB[ Bacillus halodurans ]halodurans2017Transcriptional regulatorUniRef100_Q8EL22OceanobacillusCcpA[ Oceanobacillus iheyensis ]iheyensis2018Arsenate reductase [ Bacillus subtilis ]UniRef100_P45947Bacillus subtilisArsC2019YdfA protein [ Bacillus subtilis ]UniRef100_P96678Bacillus subtilisYdfA2020YdeT protein [ Bacillus subtilis ]UniRef100_P96677Bacillus subtilisYdeT2021YdeI [ Bacillus halodurans ]UniRef100_Q9Z9R5BacillusYdeIhalodurans2022Putative secreted proteinUniRef100_Q9S1Z5Streptomyces coelicolor[ Streptomyces coelicolor ]2023Probable glucose uptake protein glcUUniRef100_P40419BacillusGlcU[ Bacillus megaterium ]megaterium2024YngK protein [ Bacillus subtilis ]UniRef100_O35015Bacillus subtilisYngK2025YngD protein [ Bacillus subtilis ]UniRef100_O31824Bacillus subtilisYngD2026Pyruvate formate-lyase-activatingUniRef100_Q73DZ6Bacillus cereusYkvLenzyme [ Bacillus cereus ]2027Formate acetyltransferase [ BacillusUniRef100_Q81YX1Bacillus anthracisanthracis ]2028DacC2029NADH dehydrogenase-like protein yjlDUniRef100_P80861Bacillus subtilisYjlD[ Bacillus subtilis ]2030Hypothetical protein yjlC [ BacillusUniRef100_O34633Bacillus subtilisYjlCsubtilis ]20312032Hypothetical protein [ Bacillus cereus ]UniRef100_Q81IJ8Bacillus cereus2033Hypothetical protein ykzH [ BacillusUniRef100_O31653Bacillus subtilissubtilis ]2034Acetyl-CoA synthetase [ BacillusUniRef100_Q9KDS4BacillusAcsAhalodurans ]halodurans2035YngE protein [ Bacillus subtilis ]UniRef100_O31825Bacillus subtilisYngE2036Hydroxybutyryl-dehydratase [ BacillusUniRef100_Q9L7W1Bacillus subtilisYngFsubtilis ]2037YngG protein [ Bacillus subtilis ]UniRef100_O34873Bacillus subtilisYngG2038YngXX [ Bacillus subtilis ]UniRef100_Q9R9I3Bacillus subtilis2039YngH [ Bacillus subtilis ]UniRef100_Q9R9I4Bacillus subtilisYngH2040YngI [ Bacillus subtilis ]UniRef100_Q9R9I5Bacillus subtilisYngI2041YngJ protein [ Bacillus subtilis ]UniRef100_O34421Bacillus subtilisYngJ2042NAD(P)H oxidoreductase YRKLUniRef100_Q7P6P0FusobacteriumYrkL[ Fusobacterium nucleatum subsp.nucleatumvincentii ATCC 49256]subsp. vincentiiATCC 492562043Transcriptional regulator, MarR familyUniRef100_Q8RE85Fusobacterium nucleatum[ Fusobacterium nucleatum ]2044Glutamate-5-semialdehydeUniRef100_Q6HHC2BacillusProAdehydrogenase [ Bacillus thuringiensis ]thuringiensis2045Glutamate 5-kinase 2 [ Bacillus subtilis ]UniRef100_O07509Bacillus subtilisProJ2046Pyrroline-5-carboxylate reductase 1UniRef100_P14383Bacillus subtilisProH[ Bacillus subtilis ]2047UPI00003CB6CD UniRef100 entryUniRef100_UPI00003CB6CDYetF2048Sodium-dependent phosphateUniRef100_Q9KCT1BacillusCysPtransporter [ Bacillus halodurans ]halodurans2049Probable phosphoadenosineUniRef100_O06737Bacillus subtilisYitBphosphosulfate reductase [ Bacillussubtilis ]2050Phosphosulfolactate synthase (ECUniRef100_O06739Bacillus subtilisYitD4.4.1.19) ((2R)-phospho-3-sulfolactatesynthase) [ Bacillus subtilis ]2051YitE [ Bacillus subtilis ]UniRef100_O06740Bacillus subtilisYitE2052YitF [ Bacillus subtilis ]UniRef100_O06741Bacillus subtilisYitF2053YitG [ Bacillus subtilis ]UniRef100_O06742Bacillus subtilisYitG2054Putative glycosyl transferase ykoTUniRef100_O34755Bacillus subtilisYkoT[ Bacillus subtilis ]2055YkoR [ Bacillus subtilis ]UniRef100_O34830Bacillus subtilisYkoS2056Glutamate synthase [NADPH] smallUniRef100_O34399NADPHGltBchain [ Bacillus subtilis ]2057GltA2058HTH-type transcriptional regulator gltCUniRef100_P20668Bacillus subtilisGltC[ Bacillus subtilis ]2059AIl7121 protein [ Anabaena sp.]UniRef100_Q8YL17Anabaena sp.20602061Lmo0606 protein [ ListeriaUniRef100_Q8Y9C6Listeria monocytogenesmonocytogenes ]2062ABC transporter ATP-binding proteinUniRef100_Q67MU2SymbiobacteriumYfiB[ Symbiobacterium thermophilum ]thermophilum2063ABC transporter ATP-binding proteinUniRef100_Q67MU3SymbiobacteriumYfiC[ Symbiobacterium thermophilum ]thermophilum2064Cytochrome P450 109 [ BacillusUniRef100_P27632Bacillus subtilisYjiBsubtilis ]2065Hypothetical oxidoreductase yoxDUniRef100_P14802Bacillus subtilisYoxD[ Bacillus subtilis ]2066Pps2067Permease, general substrateUniRef100_Q6HMC3BacillusLmrBtransporter [ Bacillus thuringiensis ]thuringiensis2068Putative formate dehydrogenaseUniRef100_O34323Bacillus subtilisYoaE[ Bacillus subtilis ]2069Transcriptional regulatory proteinUniRef100_Q89KD1BradyrhizobiumYcgE[ Bradyrhizobium japonicum ]japonicum2070Drug resistance transporter,UniRef100_Q73615Bacillus cereusMdrEmrB/QacA family [ Bacillus cereus ]2071YndE protein [ Bacillus subtilis ]UniRef100_O31809Bacillus subtilisYndE2072YndF protein [ Bacillus subtilis ]UniRef100_O31810Bacillus subtilisYndF2073YndE2074YndE2075UPI00003CB22E UniRef100 entryUniRef100_UPI00003CB22EYndD20762077Nucleotide binding protein expZUniRef100_P39115Bacillus subtilisExpZ[ Bacillus subtilis ]2078TlpB2079CsaA protein [ Bacillus subtilis ]UniRef100_P37584Bacillus subtilisCsaA2080Alkaline serine protease [ BacillusUniRef100_O31788Bacillus subtilisAprXsubtilis ]2081Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81SD4BacillusYnzEanthracis2082Transcriptional regulator, TetR familyUniRef100_Q63D70Bacillus cereusYrhI[ Bacillus cereus ZK]ZK2083Putative HTH-type transcriptionalUniRef100_P40762Bacillus subtilisYvmBregulator yvmB [ Bacillus subtilis ]2084Hydrolase [ Bacillus cereus ]UniRef100_Q81D79Bacillus cereusYqeK2085Hypothetical conserved proteinUniRef100_Q8ETG3Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2086YndJ protein [ Bacillus subtilis ]UniRef100_O31813Bacillus subtilisYndJ2087YndH protein [ Bacillus subtilis ]UniRef100_O31812Bacillus subtilisYndH2088Hypothetical protein [ Bacillus cereus ]UniRef100_Q73A97Bacillus cereusYndG2089UPI00003CBA97 UniRef100 entryUniRef100_UPI00003CBA97YobS2090UPI00003CBA98 UniRef100 entryUniRef100_UPI00003CBA98YobT2091DNA-binding protein YobU [ BacillusUniRef100_O34637Bacillus subtilisYobUsubtilis ]2092Hypothetical protein [ BacteroidesUniRef100_Q64RP1Bacteroides fragilisfragilis ]2093Transcription regulator [ BacillusUniRef100_O34920Bacillus subtilisYobVsubtilis ]2094YobW2095YozA protein [ Bacillus subtilis ]UniRef100_O31844Bacillus subtilis2096Possible metallo-beta-lactamase familyUniRef100_Q638G1Bacillus cereusYmaEprotein [ Bacillus cereus ZK]ZK20972098YfnA2099YocA2100UPI00003CBE6E UniRef100 entryUniRef100_UPI00003CBE6EYveM2101Hypothetical protein [ Bacillus cereus ]UniRef100_Q817C2Bacillus cereus21022103Glycosyl transferase [ BacillusUniRef100_Q9K7I1BacillusYtcChalodurans ]halodurans2104YozB protein [ Bacillus subtilis ]UniRef100_O31845Bacillus subtilisYozB2105Lmo2079 protein [ ListeriaUniRef100_Q8Y5I3Listeria monocytogenesmonocytogenes ]2106YocC [ Bacillus subtilis ]UniRef100_O35042Bacillus subtilisYocC2107Na+/myo-inositol cotransporterUniRef100_Q9KAR5BacillusYcgO[ Bacillus halodurans ]halodurans2108YocH [ Bacillus subtilis ]UniRef100_O34669Bacillus subtilisYocH2109RecQ homolog [ Bacillus subtilis ]UniRef100_O34748Bacillus subtilisYocI2110Hypothetical protein yqbC [ BacillusUniRef100_P45919Bacillus subtilisYqbCsubtilis ]2111Hypothetical protein yjfB [ BacillusUniRef100_O34438Bacillus subtilissubtilis ]2112Hypothetical protein yyaQ [ BacillusUniRef100_P37507Bacillus subtilisYyaQsubtilis ]2113Hypothetical protein OB2103UniRef100_Q8EPJ8Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]21142115Hypothetical protein yjgD [ BacillusUniRef100_O34681Bacillus subtilisYjgDsubtilis ]2116YjgC2117YjgC2118Hypothetical protein OB3361UniRef100_Q8EL70Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2119Hypothetical protein ypfA [ BacillusUniRef100_P38491Bacillus subtilisYpfAsubtilis ]212021212122YxiB2123212421252126YndF21272128Hypothetical protein [ Bacillus cereus ]UniRef100_Q816C2Bacillus cereus2129BH0185 protein [ Bacillus halodurans ]UniRef100_Q9KGB9Bacillus halodurans21302131YisY2132Hypothetical protein yoqHUniRef100_O64117BacteriophageYoqH[Bacteriophage SPBc2]SPBc221332134BH0429 protein [ Bacillus halodurans ]UniRef100_Q9KFP9BacillusYrhPhalodurans213530S ribosomal protein S14UniRef100_Q8ETX0Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2136UPI00002DEBB5 UniRef100 entryUniRef100_UPI00002DEBB5MutT2137Pyruvate water dikinaseUniRef100_Q8TN35MethanosarcinaPps[ Methanosarcina acetivorans ]acetivorans2138Transcriptional regulatorUniRef100_Q8ESJ8OceanobacillusYxbF[ Oceanobacillus iheyensis ]iheyensis21392140YndM protein [ Bacillus subtilis ]UniRef100_O31816Bacillus subtilisYndM2141Hypothetical protein yisT [ BacillusUniRef100_O07939Bacillus subtilisYisTsubtilis ]2142Putative acyl carrier proteinUniRef100_O35022Bacillus subtilisYocJphosphodiesterase 1 [ Bacillus subtilis ]2143General stress protein 16O [ BacillusUniRef100_P80872Bacillus subtilisYocKsubtilis ]214421452146Aldehyde dehydrogenase [ BacillusUniRef100_O34660Bacillus subtilisDhaSsubtilis ]2147YjbB protein [ Bacillus subtilis ]UniRef100_O31600Bacillus subtilisYjbB2148Aminoglycoside N6′-acetyltransferaseUniRef100_Q81AT3Bacillus cereusYjcK[ Bacillus cereus ]2149Blasticidin S deaminase, putativeUniRef100_Q81Y61Bacillus anthracis[ Bacillus anthracis ]2150SqhC2151Probable superoxide dismutase [Fe]UniRef100_O35023FeSodF[ Bacillus subtilis ]2152Stress response protein yvgOUniRef100_O32211Bacillus subtilisYvgOprecursor [ Bacillus subtilis ]2153Putative transporter [ Bacillus subtilis ]UniRef100_O34383Bacillus subtilisYocR2154Putative transporter [ Bacillus subtilis ]UniRef100_O34524Bacillus subtilisYocS2155Dihydrolipoyllysine-residueUniRef100_P16263Bacillus subtilisOdhBsuccinyltransferase component of 2-oxoglutarate dehydrogenase complex[ Bacillus subtilis ]21562-oxoglutarate dehydrogenase E1UniRef100_P23129Bacillus subtilisOdhAcomponent [ Bacillus subtilis ]2157YojO protein [ Bacillus subtilis ]UniRef100_O31849Bacillus subtilisYojO2158YojN protein [ Bacillus subtilis ]UniRef100_O31850Bacillus subtilisYojN2159Hypothetical superoxide dismutase-likeUniRef100_O31851Bacillus subtilisYojMprotein yojM precursor [ Bacillussubtilis ]2160Hypothetical protein yojL precursorUniRef100_O31852Bacillus subtilisLytF[ Bacillus subtilis ]2161Probable multidrug resistance proteinUniRef100_O31855Bacillus subtilisYojInorM (Na(+)/drug antiporter) [ Bacillussubtilis ]2162Hypothetical protein [ Bacillus cereusUniRef100_Q637Z8Bacillus cereusYojGZK]ZK2163YojF protein [ Bacillus subtilis ]UniRef100_O31858Bacillus subtilisYojF2164YojE [ Bacillus subtilis ]UniRef100_O68260Bacillus subtilis2165YojE protein [ Bacillus subtilis ]UniRef100_O31859Bacillus subtilisYojE2166Hypothetical protein yozR [ BacillusUniRef100_Q7WY67Bacillus subtilisYozRsubtilis ]2167YoaJ [ Bacillus subtilis ]UniRef100_O34918Bacillus subtilisYoaJ21682169UPI00003CBE9B UniRef100 entryUniRef100_UPI00003CBE9BYwfD2170Hypothetical UPF0087 protein yodBUniRef100_O34844Bacillus subtilisYodB[ Bacillus subtilis ]2171Putative NAD(P)H nitroreductase 12CUniRef100_P81102Bacillus subtilisYodC[ Bacillus subtilis ]2172YolF [ Bacillus subtilis ]UniRef100_O34842Bacillus subtilisYodD2173UPI0000315ACC UniRef100 entryUniRef100_UPI0000315ACC2174YodF protein [ Bacillus subtilis ]UniRef100_O34745Bacillus subtilisYodF2175IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]2176UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0692177OrfRM1 [ Bacillus subtilis ]UniRef100_O34666Bacillus subtilisCtpA2178YolB [ Bacillus subtilis ]UniRef100_O34954Bacillus subtilisYodH21792180Carboxypeptidase [ Bacillus subtilis ]UniRef100_O34866Bacillus subtilisYodJ2181Purine nucleoside phosphorylase IIUniRef100_O34925Bacillus subtilisDeoD[ Bacillus subtilis ]2182Hypothetical Membrane SpanningUniRef100_Q813P0Bacillus cereusYcgRProtein [ Bacillus cereus ]2183YcgQ protein [ Bacillus subtilis ]UniRef100_P94394Bacillus subtilisYcgQ21842185Hypothetical protein yodL [ BacillusUniRef100_O30472Bacillus subtilisYodLsubtilis ]2186YodM2187Hypothetical protein yozD [ BacillusUniRef100_O31863Bacillus subtilissubtilis ]2188Hypothetical protein yodN [ BacillusUniRef100_O34414Bacillus subtilisYodNsubtilis ]21892190YokU [ Bacillus subtilis ]UniRef100_O30470Bacillus subtilis2191Hypothetical UPF0069 protein yodOUniRef100_O34676Bacillus subtilisKamA[ Bacillus subtilis ]2192YodP [ Bacillus subtilis ]UniRef100_O34895Bacillus subtilisYodP2193Acetylornitine deacetylase [ BacillusUniRef100_O34984Bacillus subtilisYodQsubtilis ]2194Butirate-acetoacetate CoA transferaseUniRef100_O34466Bacillus subtilisYodR[ Bacillus subtilis ]2195Butyrate acetoacetate-CoA transferaseUniRef100_O34317Bacillus subtilisYodS[ Bacillus subtilis ]2196Probable aminotransferase yodTUniRef100_O34662Bacillus subtilisYodT[ Bacillus subtilis ]2197Multidrug resistance protein; possibleUniRef100_Q6HK46BacillusYkuCtetracycline resistance determinantthuringiensis[ Bacillus thuringiensis ]2198Protein cgeE [ Bacillus subtilis ]UniRef100_P42093Bacillus subtilisCgeE2199Peptide methionine sulfoxide reductaseUniRef100_P54155Bacillus subtilisYppQmsrB [ Bacillus subtilis ]2200MsrA2201Putative HTH-type transcriptionalUniRef100_P54182Bacillus subtilisYpoPregulator ypoP [ Bacillus subtilis ]22022203Hypothetical protein yhcK [ BacillusUniRef100_P54595Bacillus subtilisYhcKsubtilis ]2204Hypothetical protein ypnP [ BacillusUniRef100_P54181Bacillus subtilisYpnPsubtilis ]2205Hypothetical conserved proteinUniRef100_Q746K9Thermus thermophilus[ Thermus thermophilus ]22062207Hypothetical protein ypmS [ BacillusUniRef100_P54179Bacillus subtilisYpmSsubtilis ]2208Hypothetical protein ypmR [ BacillusUniRef100_P40766Bacillus subtilisYpmRsubtilis ]2209Hypothetical protein ypmQ [ BacillusUniRef100_P54178Bacillus subtilisYpmQsubtilis ]2210DegV family protein [ Bacillus cereusUniRef100_Q63BU6Bacillus cereusYviAZK]ZK2211Hypothetical protein ypmP [ BacillusUniRef100_P54177Bacillus subtilissubtilis ]2212Threonine dehydratase biosyntheticUniRef100_P37946Bacillus subtilisIlvA[ Bacillus subtilis ]2213Putative sigma L-dependentUniRef100_P54156Bacillus subtilisYplPtranscriptional regulator yplP [ Bacillussubtilis ]2214Hemolysin III homolog [ BacillusUniRef100_P54175Bacillus subtilisYplQsubtilis ]2215Hypothetical protein ypkP [ BacillusUniRef100_P54174Bacillus subtilisYpkPsubtilis ]2216Dihydrofolate reductase [ BacillusUniRef100_P11045Bacillus subtilisDfrAsubtilis ]2217Hypothetical protein ypjQ [ BacillusUniRef100_P54173Bacillus subtilisYpjQsubtilis ]2218YpjP2219YpiP2220Hypothetical protein yphP [ BacillusUniRef100_P54170Bacillus subtilisYphPsubtilis ]2221Dihydroxy-acid dehydratase [ BacillusUniRef100_P51785Bacillus subtilisIlvDsubtilis ]2222YpgR2223Hypothetical protein ypgQ [ BacillusUniRef100_P54168Bacillus subtilisYpgQsubtilis ]2224Glutathione peroxidase homolog bsaAUniRef100_P52035Bacillus subtilisBsaA[ Bacillus subtilis ]2225UPI00003CBA0F UniRef100 entryUniRef100_UPI00003CBA0F2226Homoserine O-succinyltransferaseUniRef100_P54167Bacillus subtilisMetA[ Bacillus subtilis ]2227Putative glycosyl transferase ypfPUniRef100_P54166Bacillus subtilisUgtP[ Bacillus subtilis ]22282229Cold shock protein cspD [ BacillusUniRef100_P51777Bacillus subtilissubtilis ]2230Regulatory protein degR [ BacillusUniRef100_P06563Bacillus subtilissubtilis ]2231Hypothetical protein ypzA [ BacillusUniRef100_O32007Bacillus subtilissubtilis ]22322233Hypothetical protein ypeP [ BacillusUniRef100_P54164Bacillus subtilisYpePsubtilis ]2234Hypothetical protein ypdP [ BacillusUniRef100_P54163Bacillus subtilisYpdPsubtilis ]223514.7 kDa ribonuclease H-like proteinUniRef100_P54162Bacillus subtilisYpdQ[ Bacillus subtilis ]2236Probable 5′-3′ exonuclease [ BacillusUniRef100_P54161Bacillus subtilisYpcPsubtilis ]22372238Hypothetical protein ypbS [ BacillusUniRef100_P54160Bacillus subtilissubtilis ]2239Hypothetical protein ypbR [ BacillusUniRef100_P54159Bacillus subtilisYpbRsubtilis ]22402241Hypothetical protein ypbQ [ BacillusUniRef100_P54158Bacillus subtilisYpbQsubtilis ]2242BcsA2243Predicted acetyltransferaseUniRef100_Q97G03ClostridiumYokL[ Clostridium acetobutylicum ]acetobutylicum2244Xanthine permease [ Bacillus subtilis ]UniRef100_P42086Bacillus subtilisPbuX2245Xanthine phosphoribosyltransferaseUniRef100_P42085Bacillus subtilisXpt[ Bacillus subtilis ]2246Hypothetical metalloprotease ypwAUniRef100_P50848Bacillus subtilisYpwA[ Bacillus subtilis ]2247YpvA2248Hypothetical protein yptA precursorUniRef100_P50841Bacillus subtilis[ Bacillus subtilis ]22492250Hypothetical UPF0020 protein ypsCUniRef100_P50840Bacillus subtilisYpsCprecursor [ Bacillus subtilis ]2251Hypothetical protein ypsB [ BacillusUniRef100_P50839Bacillus subtilissubtilis ]2252Hypothetical protein ypsA [ BacillusUniRef100_P50838Bacillus subtilisYpsAsubtilis ]2253Spore coat protein D [ Bacillus subtilis ]UniRef100_P07791Bacillus subtilis22542255YprB2256YprA2257Putative PTS system IIA componentUniRef100_P50829Bacillus subtilisYpqEypqE [ Bacillus subtilis ]2258Hypothetical protein ypqA precursorUniRef100_P50836Bacillus subtilisYpqA[ Bacillus subtilis ]2259Hypothetical protein yppG [ BacillusUniRef100_P50835Bacillus subtilisYppGsubtilis ]22602261YppE226222632264Hypothetical protein yppC [ BacillusUniRef100_P39791Bacillus subtilisYppCsubtilis ]2265Recombination protein U [ BacillusUniRef100_P39792Bacillus subtilisRecUsubtilis ]2266Penicillin-binding protein 1A/1B (PBP1)UniRef100_P39793Includes:PonA[Includes: Penicillin-insensitivePenicillin-transglycosylase (EC 2.4.2.—)insensitive(Peptidoglycan TGase); Penicillin-transglycosylasesensitive transpeptidase (EC 3.4.—.—)(EC 2.4.2.—)(DD-transpeptidase)] [ Bacillus subtilis ](PeptidoglycanTGase);Penicillin-sensitivetranspeptidase(EC 3.4.—.—) (DD-transpeptidase)2267Hypothetical protein ypoC [ BacillusUniRef100_P39789Bacillus subtilisYpoCsubtilis ]2268Probable endonuclease III (ECUniRef100_P39788Bacillus subtilisNth4.2.99.18) (DNA-(apurinic orapyrimidinic site) lyase) [ Bacillussubtilis ]2269DNA replication protein dnaD [ BacillusUniRef100_P39787Bacillus subtilisDnaDsubtilis ]2270Asparaginyl-tRNA synthetase [ BacillusUniRef100_P39772Bacillus subtilisAsnSsubtilis ]2271Aspartate aminotransferase [ BacillusUniRef100_P53001Bacillus subtilisAspBsubtilis ]2272Hypothetical protein ypmB [ BacillusUniRef100_P54396Bacillus subtilisYpmBsubtilis ]2273Hypothetical protein ypmA [ BacillusUniRef100_P54395Bacillus subtilissubtilis ]2274Probable ATP-dependent helicaseUniRef100_P54394Bacillus subtilisDinGdinG homolog [ Bacillus subtilis ]2275Aspartate 1-decarboxylase precursorUniRef100_P52999Bacillus subtilisPanD[ Bacillus subtilis ]2276Pantoate--beta-alanine ligase [ BacillusUniRef100_P52998Bacillus subtilisPanCsubtilis ]22773-methyl-2-oxobutanoateUniRef100_P52996Bacillus subtilisPanBhydroxymethyltransferase [ Bacillussubtilis ]2278BirA bifunctional protein [Includes:UniRef100_P42975Includes: BiotinBirABiotin operon repressor; Biotin--operon[acetyl-CoA-carboxylase] synthetaserepressor; Biotin--(EC 6.3.4.15) (Biotin--protein ligase)][ Bacillus subtilis ]2279Poly(A) polymerase [ Bacillus subtilis ]UniRef100_P42977Bacillus subtilisCca2280Putative glycosyl transferase ypjHUniRef100_P42982Bacillus subtilisYpjH[ Bacillus subtilis ]2281Hypothetical protein ypjG [ BacillusUniRef100_P42981Bacillus subtilisYpjGsubtilis ]2282Methylglyoxal synthase [ BacillusUniRef100_P42980Bacillus subtilisMgsAsubtilis ]2283Dihydrodipicolinate reductase [ BacillusUniRef100_P42976Bacillus subtilisDapBsubtilis ]2284Hypothetical protein ypjD [ BacillusUniRef100_P42979Bacillus subtilisYpjDsubtilis ]2285YpjC2286Hypothetical protein ypjB precursorUniRef100_P54393Bacillus subtilisYpjB[ Bacillus subtilis ]2287YpjA2288QcrC2289Menaquinol-cytochrome c reductaseUniRef100_P46912Bacillus subtilisQcrBcytochrome b subunit [ Bacillus subtilis ]2290Menaquinol-cytochrome c reductaseUniRef100_P46911Bacillus subtilisQcrAiron-sulfur subunit [ Bacillus subtilis ]2291Hypothetical protein ypiF [ BacillusUniRef100_P54391Bacillus subtilisYpiFsubtilis ]2292Hypothetical UPF0302 protein ypiBUniRef100_P54390Bacillus subtilisYpiB[ Bacillus subtilis ]2293Hypothetical protein ypiA [ BacillusUniRef100_P54389Bacillus subtilisYpiAsubtilis ]22943-phosphoshikimate 1-UniRef100_P20691Bacillus subtilisAroEcarboxyvinyltransferase [ Bacillussubtilis ]2295Prephenate dehydrogenase [ BacillusUniRef100_P20692Bacillus subtilisTyrAsubtilis ]2296HisC2297Tryptophan synthase alpha chainUniRef100_P07601Bacillus subtilisTrpA[ Bacillus subtilis ]2298Tryptophan synthase beta chainUniRef100_P07600Bacillus subtilisTrpB[ Bacillus subtilis ]2299N-(5′-phosphoribosyl)anthranilateUniRef100_P20167Bacillus subtilisTrpFisomerase [ Bacillus subtilis ]2300Indole-3-glycerol phosphate synthaseUniRef100_P03964Bacillus subtilisTrpC[ Bacillus subtilis ]2301Anthranilate phosphoribosyltransferaseUniRef100_P03947Bacillus subtilisTrpD[ Bacillus subtilis ]2302Anthranilate synthase component IUniRef100_P03963Bacillus subtilisTrpE[ Bacillus subtilis ]2303Chorismate mutase [ Bacillus subtilis ]UniRef100_P19080Bacillus subtilisAroH23043-dehydroquinate synthase [ BacillusUniRef100_P31102Bacillus subtilisAroBsubtilis ]2305Chorismate synthase [ Bacillus subtilis ]UniRef100_P31104Bacillus subtilisAroF2306Chemotaxis protein methyltransferaseUniRef100_P31105Bacillus subtilisCheR[ Bacillus subtilis ]2307Nucleoside diphosphate kinaseUniRef100_P31103Bacillus subtilisNdk[ Bacillus subtilis ]2308Heptaprenyl diphosphate synthaseUniRef100_P31114Bacillus subtilisHepTcomponent II [ Bacillus subtilis ]2309Menaquinone biosynthesisUniRef100_P31113Bacillus subtilisMenHmethyltransferase ubiE [ Bacillussubtilis ]2310Heptaprenyl diphosphate synthaseUniRef100_P31112Bacillus subtilisHepScomponent I [ Bacillus subtilis ]2311Transcription attenuation protein mtrBUniRef100_P19466Bacillus subtilis[ Bacillus subtilis ]2312GTP cyclohydrolase I [ Bacillus subtilis ]UniRef100_P19465Bacillus subtilisMtrA2313DNA-binding protein HU 1 [ BacillusUniRef100_P08821Bacillus subtilissubtilis ]2314Stage IV sporulation protein A [ BacillusUniRef100_P35149Bacillus subtilisSpoIVAsubtilis ]2315Hypothetical protein yphF [ BacillusUniRef100_P39911Bacillus subtilisYphFsubtilis ]2316Hypothetical protein yphE [ BacillusUniRef100_P50744Bacillus subtilissubtilis ]2317Glycerol-3-phosphate dehydrogenaseUniRef100_P46919NAD(P)+GpsA[NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphatedehydrogenase) (NAD(P)H-dependentdihydroxyacetone-phosphatereductase) [ Bacillus subtilis ]2318YphC2319Hypothetical protein OB1798UniRef100_Q8EQA7Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2320Hypothetical protein yphB [ BacillusUniRef100_P50742Bacillus subtilisSeaAsubtilis ]2321Hypothetical protein yphA [ BacillusUniRef100_P50741Bacillus subtilisYphAsubtilis ]23222323YpgA232430S ribosomal protein S1 homologUniRef100_P38494Bacillus subtilisYpfD[ Bacillus subtilis ]2325Cytidylate kinase [ Bacillus subtilis ]UniRef100_P38493Bacillus subtilisCmk2326Hypothetical protein ypfB [ BacillusUniRef100_P38492Bacillus subtilissubtilis ]2327Sporulation protein ypeB [ BacillusUniRef100_P38490Bacillus subtilisYpeBsubtilis ]2328Spore cortex-lytic enzyme precursorUniRef100_P50739Bacillus subtilisSleB[ Bacillus subtilis ]2329YpdC2330YccC2331Hypothetical protein ypdA [ BacillusUniRef100_P50736Bacillus subtilisYpdAsubtilis ]2332NAD-specific glutamateUniRef100_P50735Bacillus subtilisGudBdehydrogenase [ Bacillus subtilis ]2333Adapter protein mecA 2 [ BacillusUniRef100_P50734Bacillus subtilisYpbHsubtilis ]2334Hypothetical protein ypbG precursorUniRef100_P50733Bacillus subtilisYpbG[ Bacillus subtilis ]2335YpbF2336Hypothetical protein ypbE [ BacillusUniRef100_P50731Bacillus subtilisYpbEsubtilis ]2337Hypothetical protein ypbD [ BacillusUniRef100_P50730Bacillus subtilisYpbDsubtilis ]2338ATP-dependent DNA helicase recQUniRef100_P50729Bacillus subtilisRecQ[ Bacillus subtilis ]2339Hypothetical protein ypbB [ BacillusUniRef100_P50728Bacillus subtilisYpbBsubtilis ]2340Ferredoxin [ Bacillus subtilis ]UniRef100_P50727Bacillus subtilis2341Hypothetical protein ypaA [ BacillusUniRef100_P50726Bacillus subtilisYpaAsubtilis ]23422343D-3-phosphoglycerate dehydrogenaseUniRef100_P35136Bacillus subtilisSerA[ Bacillus subtilis ]2344BH1600 protein [ Bacillus halodurans ]UniRef100_Q9KCH1Bacillus halodurans2345Sigma-X negative effector [ BacillusUniRef100_P35166Bacillus subtilisRsiXsubtilis ]2346RNA polymerase sigma factor sigXUniRef100_P35165Bacillus subtilisSigX[ Bacillus subtilis ]2347Transcriptional regulator [ BacillusUniRef100_Q72XJ3Bacillus cereusLytRcereus ]2348Endo-1,4-beta-xylanase [ BacillusUniRef100_Q9K630BacillusYheNhalodurans ]halodurans23492350Alkaline phosphatase synthesis sensorUniRef100_Q898N3ClostridiumYclKprotein phoR [ Clostridium tetani ]tetani2351Response regulators consisting of aUniRef100_Q8R9H7ThermoanaerobacterYycFCheY-like receiver domain and a HTHtengcongensisDNA-binding domain[ Thermoanaerobacter tengcongensis ]2352Sensor protein resE [ Bacillus subtilis ]UniRef100_P35164Bacillus subtilisResE2353Transcriptional regulatory protein resDUniRef100_P35163Bacillus subtilisResD[ Bacillus subtilis ]2354Protein resC [ Bacillus subtilis ]UniRef100_P35162Bacillus subtilisResC2355ResB protein [ Bacillus subtilis ]UniRef100_P35161Bacillus subtilisResB2356Thiol-disulfide oxidoreductase resAUniRef100_P35160Bacillus subtilisResA[ Bacillus subtilis ]2357Ribosomal large subunit pseudouridineUniRef100_P35159Bacillus subtilisRluBsynthase B [ Bacillus subtilis ]2358Spore maturation protein B [ BacillusUniRef100_P35158Bacillus subtilisSpmBsubtilis ]2359Spore maturation protein A [ BacillusUniRef100_P35157Bacillus subtilisSpmAsubtilis ]2360Penicillin-binding protein 5* precursorUniRef100_P35150Bacillus subtilisDacB[ Bacillus subtilis ]2361Hypothetical protein ypul [ BacillusUniRef100_P35156Bacillus subtilisYpuIsubtilis ]2362Segregation and condensation proteinUniRef100_P35155Bacillus subtilisYpuHB [ Bacillus subtilis ]2363Segregation and condensation proteinUniRef100_P35154Bacillus subtilisYpuGA [ Bacillus subtilis ]23642365Hypothetical protein ypuF [ BacillusUniRef100_P17617Bacillus subtilisYpuFsubtilis ]2366RibT protein [ Bacillus subtilis ]UniRef100_P17622Bacillus subtilisRibT23676,7-dimethyl-8-ribityllumazine synthaseUniRef100_Q44681BacillusRibH[ Bacillus amyloliquefaciens ]amyloliquefaciens2368Riboflavin biosynthesis protein ribAUniRef100_P17620Includes: GTPRibA[Includes: GTP cyclohydrolase II (ECcyclohydrolase II3.5.4.25); 3,4-dihydroxy-2-butanone 4-(EC 3.5.4.25);phosphate synthase (DHBP synthase)]3,4-dihydroxy-2-[ Bacillus subtilis ]butanone 4-phosphatesynthase (DHBPsynthase)2369Riboflavin synthase alpha chainUniRef100_P16440Bacillus subtilisRibE[ Bacillus subtilis ]2370Riboflavin biosynthesis protein ribDUniRef100_P17618Includes:RibD[Includes:DiaminohydroxyphosphoribosylaminopyrimidineDiaminohydroxyphosphoribosylaminopyrimidinedeaminase (ECdeaminase (EC 3.5.4.26)3.5.4.26)(Riboflavin-specific deaminase); 5-(Riboflavin-amino-6-(5-specificphosphoribosylamino)uracil reductasedeaminase); 5-(EC 1.1.1.193) (HTP reductase)]amino-6-(5-[ Bacillus subtilis ]phosphoribosylamino)uracilreductase (EC1.1.1.193) (HTPreductase)2371Hypothetical protein ypuD [ BacillusUniRef100_P17616Bacillus subtilisYpuDsubtilis ]2372Putative serine/threonine proteinUniRef100_Q7VFC1HelicobacterYjbPphosphatase [ Helicobacter hepaticus ]hepaticus2373Stress response homolog Hsp [ BacillusUniRef100_Q9X3Z5Bacillus subtilissubtilis ]2374Response regulator aspartateUniRef100_Q00828Bacillus subtilisRapAphosphatase A [ Bacillus subtilis ]2375Peptidyl-prolyl cis-trans isomerase BUniRef100_P35137Bacillus subtilisPpiB[ Bacillus subtilis ]2376YpuA2377IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]2378UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0692379YndL2380Diaminopimelate decarboxylaseUniRef100_P23630Bacillus subtilisLysA[ Bacillus subtilis ]23812382Stage V sporulation protein AFUniRef100_P31845Bacillus subtilisSpoVAF[ Bacillus subtilis ]2383Stage V sporulation protein AEUniRef100_P40870Bacillus subtilisSpoVAE[ Bacillus subtilis ]2384Stage V sporulation protein AEUniRef100_P40870Bacillus subtilisSpoVAE[ Bacillus subtilis ]2385Stage V sporulation protein ADUniRef100_P40869Bacillus subtilisSpoVAD[ Bacillus subtilis ]2386SpoVAC2387Stage V sporulation protein ABUniRef100_P40867Bacillus subtilisSpoVAB[ Bacillus subtilis ]2388Stage V sporulation protein AAUniRef100_P40866Bacillus subtilisSpoVAA[ Bacillus subtilis ]2389SigF2390SpoIIAB2391SpoIIAA2392Penicillin-binding protein dacFUniRef100_P38422Bacillus subtilisDacFprecursor [ Bacillus subtilis ]2393Purine nucleoside phosphorylase IUniRef100_P46354Bacillus subtilisPunA[ Bacillus subtilis ]2394Phosphopentomutase [ Bacillus subtilis ]UniRef100_P46353Bacillus subtilisDrm2395Tyrosine recombinase xerD [ BacillusUniRef100_P46352Bacillus subtilisRipXsubtilis ]23962397Ferric uptake regulation proteinUniRef100_P54574Bacillus subtilisFur[ Bacillus subtilis ]2398Stage II sporulation protein M [ BacillusUniRef100_P37873Bacillus subtilisSpoIIMsubtilis ]2399Lmo2763 protein [ ListeriaUniRef100_Q926Y4ListeriaYdhOmonocytogenes ]monocytogenes2400UPI00003CA2F1 UniRef100 entryUniRef100_UPI00003CA2F12401Probable allantoin permease [ BacillusUniRef100_P94575Bacillus subtilisYwoEsubtilis ]2402YdaF2403Hypothetical protein yqkK [ BacillusUniRef100_P54573Bacillus subtilissubtilis ]2404YybD2405Hypothetical protein [ Bacillus pumilus ]UniRef100_Q93PN4Bacillus pumilusYqxK2406ADP-ribose pyrophosphatase [ BacillusUniRef100_P54570Bacillus subtilisNudEsubtilis ]24072408YdgC protein [ Bacillus subtilis ]UniRef100_P96701Bacillus subtilisYdgC2409Hypothetical protein ydgD [ BacillusUniRef100_P96702Bacillus subtilisYdgDsubtilis ]2410Hypothetical oxidoreductase yqkFUniRef100_P54569Bacillus subtilisYqkF[ Bacillus subtilis ]24112412YqkD2413Hypothetical protein yqkC [ BacillusUniRef100_P54566Bacillus subtilissubtilis ]2414Hypothetical protein yqkB [ BacillusUniRef100_P54565Bacillus subtilisYqkBsubtilis ]2415UPI00003CBE2B UniRef100 entryUniRef100_UPI00003CBE2B2416Hypothetical UPF0157 protein yqkAUniRef100_P54564Bacillus subtilisYqkA[ Bacillus subtilis ]2417Hypothetical protein yqjZ [ BacillusUniRef100_P54563Bacillus subtilisYqjZsubtilis ]2418Lipase precursor [ Bacillus subtilis ]UniRef100_P37957Bacillus subtilisLip24192420Nickel ABC transporter [ BacillusUniRef100_Q9KBX8BacillusAppAhalodurans ]halodurans2421Nickel ABC transporter [ BacillusUniRef100_Q9KBX7BacillusAppBhalodurans ]halodurans2422Nickel ABC transporter [ BacillusUniRef100_Q9KBX6BacillusAppChalodurans ]halodurans2423Putative oligopeptide ABC transporterUniRef100_Q895A4ClostridiumDppD[ Clostridium tetani ]tetani2424Putative oligopeptide ABC transporterUniRef100_Q895A5ClostridiumOppF[ Clostridium tetani ]tetani2425DNA-damage-inducible proteinUniRef100_Q9KDR1BacillusYojI[ Bacillus halodurans ]halodurans2426Fibronectin-binding protein [ BacillusUniRef100_Q63CW1Bacillus cereus ZKcereus ZK]2427Hypothetical protein yolDUniRef100_O64030BacteriophageYolD[Bacteriophage SPBc2]SPBc22428UvrX2429Hypothetical protein yqzH [ BacillusUniRef100_O32014Bacillus subtilissubtilis ]2430Hypothetical transport protein yqjVUniRef100_P54559Bacillus subtilisYqjV[ Bacillus subtilis ]2431Hypothetical protein yqjT [ BacillusUniRef100_P54557Bacillus subtilisYqjTsubtilis ]2432CoaA2433LacG [ Lactococcus lactis ]UniRef100_Q9RAU9Lactococcus lactis2434LacF [ Lactococcus lactis ]UniRef100_Q9RAV2LactococcusYdbJlactis24352436Hypothetical protein [ BacillusUniRef100_Q70K07Bacillus amyloliquefaciensamyloliquefaciens ]2437Hypothetical protein [ Bacillus cereus ]UniRef100_Q737G3Bacillus cereus2438YmaC protein [ Bacillus subtilis ]UniRef100_O31789Bacillus subtilisYmaC2439Hypothetical oxidoreductase yqjQUniRef100_P54554Bacillus subtilisYqjQ[ Bacillus subtilis ]2440YqjP2441ProI2442Hypothetical protein yqjN [ BacillusUniRef100_P54551Bacillus subtilisYqjNsubtilis ]2443Probable NADH-dependent flavinUniRef100_P54550Bacillus subtilisYqjMoxidoreductase yqjM [ Bacillus subtilis ]2444Hypothetical protein yqjL [ BacillusUniRef100_P54549Bacillus subtilisYqjLsubtilis ]24452446Ribonuclease Z [ Bacillus subtilis ]UniRef100_P54548Bacillus subtilisYqjK2447Glucose-6-phosphate 1-UniRef100_P54547Bacillus subtilisZwfdehydrogenase [ Bacillus subtilis ]2448Hypothetical conserved proteinUniRef100_Q8ELZ9OceanobacillusCitH[ Oceanobacillus iheyensis ]iheyensis2449Hypothetical protein OB3065UniRef100_Q8ELZ8Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2450Immunogenic protein [ OceanobacillusUniRef100_Q8ELZ7OceanobacillusSsuAiheyensis ]iheyensis2451YdhQ protein [ Bacillus subtilis ]UniRef100_O05509Bacillus subtilisYdhQ2452Beta-glucosidase [ Bacillus halodurans ]UniRef100_Q9K615BacillusYdhPhalodurans2453Putative cellobiose-specific enzyme IICUniRef100_Q8KP28Bacillus pumilusYdhO[ Bacillus pumilus ]2454YdhO protein [ Bacillus subtilis ]UniRef100_O05507Bacillus subtilisYdhO2455YdhN protein [ Bacillus subtilis ]UniRef100_O05506Bacillus subtilisYdhN2456PTS system, cellobiose-specificUniRef100_Q9K613Bacillus haloduransenzyme II, B component [ Bacillushalodurans ]2457Alkaline phosphatase [ Bacillus cereusUniRef100_Q639W1Bacillus cereusPhoBZK]ZK2458Glucose 1-dehydrogenase A [ BacillusUniRef100_P10528BacillusGdhmegaterium ]megaterium24596-phosphogluconate dehydrogenase,UniRef100_P80859Bacillus subtilisYqjIdecarboxylating II [ Bacillus subtilis ]2460DNA polymerase IV 1 [ Bacillus subtilis ]UniRef100_P54545Bacillus subtilisYqjH2461Hypothetical protein yqzJ [ BacillusUniRef100_Q7WY64Bacillus subtilissubtilis ]2462YqjG2463Hypothetical protein yqjE [ BacillusUniRef100_P54542Bacillus subtilisYqjEsubtilis ]2464Methylmalonyl-CoA decarboxylaseUniRef100_Q9K8P6BacillusYqjDalpha subunit [ Bacillus halodurans ]halodurans2465Hypothetical protein yqjA [ BacillusUniRef100_P54538Bacillus subtilisYqjAsubtilis ]2466Probable amino-acid ABC transporterUniRef100_P54537Bacillus subtilisYqiZATP-binding protein yqiZ [ Bacillussubtilis ]2467Probable amino-acid ABC transporterUniRef100_P54536Bacillus subtilisYqiYpermease protein yqiY [ Bacillussubtilis ]2468Probable amino-acid ABC transporterUniRef100_P54535Bacillus subtilisYqiXextracellular binding protein yqiXprecursor [ Bacillus subtilis ]2469Hypothetical protein yqiW [ BacillusUniRef100_P54534Bacillus subtilisYqiWsubtilis ]2470Protein bmrU [ Bacillus subtilis ]UniRef100_P39074Bacillus subtilisBmrU2471Lipoamide acyltransferase componentUniRef100_P37942Bacillus subtilisBkdBof branched-chain alpha-keto aciddehydrogenase complex (EC2.3.1.168) (Dihydrolipoyllysine-residue(2-methylpropanoyl)transferase)[ Bacillus subtilis ]24722-oxoisovalerate dehydrogenase betaUniRef100_P37941Bacillus subtilisBkdABsubunit [ Bacillus subtilis ]24732-oxoisovalerate dehydrogenase alphaUniRef100_P37940Bacillus subtilisBkdAAsubunit [ Bacillus subtilis ]2474Dihydrolipoyl dehydrogenase [ BacillusUniRef100_P54533Bacillus subtilisLpdVsubtilis ]2475Probable butyrate kinase [ BacillusUniRef100_P54532Bacillus subtilisBuksubtilis ]2476Leucine dehydrogenase [ BacillusUniRef100_P54531Bacillus subtilisBcdsubtilis ]2477Probable phosphate butyryltransferaseUniRef100_P54530Bacillus subtilisPtb[ Bacillus subtilis ]2478Putative sigma L-dependentUniRef100_P54529Bacillus subtilisBkdRtranscriptional regulator yqiR [ Bacillussubtilis ]2479Hypothetical protein yqzF [ BacillusUniRef100_O32015Bacillus subtilissubtilis ]2480Hypothetical protein yqiK [ BacillusUniRef100_P54527Bacillus subtilisYqiKsubtilis ]2481Hypothetical protein yqiI [ BacillusUniRef100_P54525Bacillus subtilisYqiIsubtilis ]2482YqiH2483Serine O-acetyltransferaseUniRef100_Q8PSY4MethanosarcinaCysE[ Methanosarcina mazei ]mazei24842485Stage 0 sporulation protein A [ BacillusUniRef100_P06534Bacillus subtilisSpo0Asubtilis ]2486SpoIVB2487DNA repair protein recN [ BacillusUniRef100_Q659H4BacillusRecNamyloliquefaciens ]amyloliquefaciens2488Arginine repressor [ Bacillus subtilis ]UniRef100_P17893Bacillus subtilisAhrC2489Hypothetical protein yqxC [ BacillusUniRef100_P19672Bacillus subtilisYqxCsubtilis ]2490Dxs2491Geranyltranstransferase [ BacillusUniRef100_P54383Bacillus subtilisYqiDsubtilis ]2492Probable exodeoxyribonuclease VIIUniRef100_P54522Bacillus subtilissmall subunit [ Bacillus subtilis ]2493Probable exodeoxyribonuclease VIIUniRef100_P54521Bacillus subtilisYqiBlarge subunit [ Bacillus subtilis ]2494FolD bifunctional protein [Includes:UniRef100_P54382Includes:FolDMethylenetetrahydrofolateMethylenetetrahydrofolatedehydrogenase (EC 1.5.1.5);dehydrogenaseMethenyltetrahydrofolate(EC 1.5.1.5);cyclohydrolase (EC 3.5.4.9)] [ BacillusMethenyltetrahydrofolatesubtilis ]cyclohydrolase(EC 3.5.4.9)2495N utilization substance protein BUniRef100_P54520Bacillus subtilisNusBhomolog [ Bacillus subtilis ]2496Hypothetical protein yqhY [ BacillusUniRef100_P54519Bacillus subtilisYqhYsubtilis ]2497AccC2498Biotin carboxyl carrier protein of acetyl-UniRef100_P49786Bacillus subtilisAccBCoA carboxylase [ Bacillus subtilis ]2499Stage III sporulation protein AHUniRef100_P49785Bacillus subtilisSpoIIIAH[ Bacillus subtilis ]2500Stage III sporulation protein AGUniRef100_P49784Bacillus subtilisSpoIIIAG[ Bacillus subtilis ]2501Stage III sporulation protein AFUniRef100_P49783Bacillus subtilisSpoIIIAF[ Bacillus subtilis ]2502Stage III sporulation protein AEUniRef100_P49782Bacillus subtilisSpoIIIAE[ Bacillus subtilis ]2503Stage III sporulation protein ADUniRef100_P49781Bacillus subtilisSpoIIIAD[ Bacillus subtilis ]2504Stage III sporulation protein ACUniRef100_P49780Bacillus subtilis[ Bacillus subtilis ]2505Stage III sporulation protein ABUniRef100_Q01368Bacillus subtilisSpoIIIAB[ Bacillus subtilis ]2506SpoIIIAA2507Hypothetical protein yqhV [ BacillusUniRef100_P49779Bacillus subtilissubtilis ]2508Elongation factor P [ Bacillus subtilis ]UniRef100_P49778Bacillus subtilisEfp2509Putative peptidase yqhT [ BacillusUniRef100_P54518Bacillus subtilisYqhTsubtilis ]25103-dehydroquinate dehydrataseUniRef100_P54517Bacillus subtilisYqhS[ Bacillus subtilis ]2511Hypothetical protein yqhR [ BacillusUniRef100_P54516Bacillus subtilisYqhRsubtilis ]2512Hypothetical protein yqhQ [ BacillusUniRef100_P54515Bacillus subtilisYqhQsubtilis ]2513Hypothetical protein yqhP [ BacillusUniRef100_P54514Bacillus subtilisYqhPsubtilis ]2514Hypothetical protein yqhO [ BacillusUniRef100_P54513Bacillus subtilisYqhOsubtilis ]2515Transcriptional regulator mntR [ BacillusUniRef100_P54512Bacillus subtilisMntRsubtilis ]2516Hypothetical protein yqhM [ BacillusUniRef100_P54511Bacillus subtilisYqhMsubtilis ]2517Hypothetical protein yqhL [ BacillusUniRef100_P54510Bacillus subtilisYqhLsubtilis ]2518Glycine betaine-binding proteinUniRef100_P46922Bacillus subtilisOpuACprecursor [ Bacillus subtilis ]2519Glycine betaine transport systemUniRef100_P46921Bacillus subtilisOpuABpermease protein opuAB [ Bacillussubtilis ]2520Glycine betaine transport ATP-bindingUniRef100_P46920Bacillus subtilisOpuAAprotein opuAA [ Bacillus subtilis ]2521Probable glycine dehydrogenaseUniRef100_P54377decarboxylatingGcvPB[decarboxylating] subunit 2 [ Bacillussubtilis ]2522Probable glycine dehydrogenaseUniRef100_P54376decarboxylatingGcvPA[decarboxylating] subunit 1 [ Bacillussubtilis ]2523Aminomethyltransferase [ BacillusUniRef100_P54378Bacillus subtilisGcvTsubtilis ]2524Hypothetical helicase yqhH [ BacillusUniRef100_P54509Bacillus subtilisYqhHsubtilis ]2525Hypothetical protein yqhG [ BacillusUniRef100_P54508Bacillus subtilisYqhGsubtilis ]25262527SinR2528Spore coat-associated protein NUniRef100_P54507Bacillus subtilisTasA[ Bacillus subtilis ]2529Signal peptidase I W [ Bacillus subtilis ]UniRef100_P54506Bacillus subtilisSipW2530Hypothetical protein yqxM [ BacillusUniRef100_P40949Bacillus subtilisYqxMsubtilis ]2531YqzG protein [ Bacillus subtilis ]UniRef100_O32019Bacillus subtilisYqzG2532YqzE protein [ Bacillus subtilis ]UniRef100_O32020Bacillus subtilis2533ComGG2534ComGF2535ComG operon protein 5 precursorUniRef100_P25957Bacillus subtilisComGE[ Bacillus subtilis ]2536ComG operon protein 4 precursorUniRef100_P25956Bacillus subtilisComGD[ Bacillus subtilis ]2537ComG operon protein 3 precursorUniRef100_P25955Bacillus subtilis[ Bacillus subtilis ]2538ComGB2539ComG operon protein 1 [ BacillusUniRef100_P25953Bacillus subtilisComGAsubtilis ]2540Hypothetical protein yqhA [ BacillusUniRef100_P54504Bacillus subtilisYqhAsubtilis ]2541Hypothetical protein yqgZ [ BacillusUniRef100_P54503Bacillus subtilisYqgZsubtilis ]2542Hypothetical protein yqgY [ BacillusUniRef100_P54502Bacillus subtilissubtilis ]2543Hypothetical protein yqgX [ BacillusUniRef100_P54501Bacillus subtilisYqgXsubtilis ]2544Hypothetical protein yqgW [ BacillusUniRef100_P54500Bacillus subtilissubtilis ]2545Hypothetical protein [ StaphylococcusUniRef100_Q8CSE8Staphylococcus epidermidisepidermidis ]2546YqgU2547Hypothetical protein yqgT [ BacillusUniRef100_P54497Bacillus subtilisYqgTsubtilis ]2548Ferrichrome-binding protein precursorUniRef100_P37580Bacillus subtilisFhuD[ Bacillus subtilis ]2549Hypothetical protein yqgS [ BacillusUniRef100_P54496Bacillus subtilisYqgSsubtilis ]2550Glucokinase [ Bacillus subtilis ]UniRef100_P54495Bacillus subtilisGlcK2551Hypothetical protein yqgQ [ BacillusUniRef100_P54494Bacillus subtilissubtilis ]2552Stage V sporulation protein AFUniRef100_Q8EQ08OceanobacillusSpoVAF[ Oceanobacillus iheyensis ]iheyensis2553Hypothetical protein yqgP [ BacillusUniRef100_P54493Bacillus subtilisYqgPsubtilis ]2554Hypothetical protein yqgO [ BacillusUniRef100_P54492Bacillus subtilissubtilis ]2555Hypothetical protein yqgN [ BacillusUniRef100_P54491Bacillus subtilisYqgNsubtilis ]25562557YqgM2558Hypothetical protein yqgL [ BacillusUniRef100_P54489Bacillus subtilisYqgLsubtilis ]2559YqzD2560YqzC protein [ Bacillus subtilis ]UniRef100_O32023Bacillus subtilisYqzC2561Phosphate import ATP-binding proteinUniRef100_P46342Bacillus subtilisPstBBpstB 1 [ Bacillus subtilis ]2562Phosphate import ATP-binding proteinUniRef100_P46341Bacillus subtilisPstBApstB 2 [ Bacillus subtilis ]2563Probable ABC transporter permeaseUniRef100_P46340Bacillus subtilisPstAprotein yqqI [ Bacillus subtilis ]2564Probable ABC transporter permeaseUniRef100_P46339Bacillus subtilisPstCprotein yqgH [ Bacillus subtilis ]2565Probable ABC transporter bindingUniRef100_P46338Bacillus subtilisPstSprotein yqgG precursor [ Bacillussubtilis ]2566Hypothetical protein yqgF [ BacillusUniRef100_P54488Bacillus subtilisPbpAsubtilis ]2567Hypothetical protein yqgE [ BacillusUniRef100_P54487Bacillus subtilisYqgEsubtilis ]2568SodA2569Hypothetical protein yqgC [ BacillusUniRef100_P54486Bacillus subtilisYqgCsubtilis ]2570Hypothetical protein yqgB [ BacillusUniRef100_P54485Bacillus subtilisYqgBsubtilis ]2571Hypothetical protein yqfZ [ BacillusUniRef100_P54483Bacillus subtilissubtilis ]25724-hydroxy-3-methylbut-2-en-1-ylUniRef100_P54482Bacillus subtilisYqfYdiphosphate synthase (EC 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) [ Bacillussubtilis ]2573Hypothetical protein yqfX [ BacillusUniRef100_P54481Bacillus subtilisYqfXsubtilis ]2574Putative nucleotidase yqfW [ BacillusUniRef100_P54480Bacillus subtilisYqfWsubtilis ]2575Zinc-specific metalloregulatory proteinUniRef100_P54479Bacillus subtilisZur[ Bacillus subtilis ]2576Metal (Zinc) transport protein [ ListeriaUniRef100_Q926D9Listeria innocuaYceAinnocua ]2577YcdI2578Hypothetical protein yqfU [ BacillusUniRef100_P54478Bacillus subtilisYqfUsubtilis ]25792580Probable endonuclease IV [ BacillusUniRef100_P54476Bacillus subtilisYqfSsubtilis ]2581Probable RNA helicase yqfR [ BacillusUniRef100_P54475Bacillus subtilisYqfRsubtilis ]2582Hypothetical protein yqfQ [ BacillusUniRef100_P54474Bacillus subtilisYqfQsubtilis ]25834-hydroxy-3-methylbut-2-enylUniRef100_P54473Bacillus subtilisYqfPdiphosphate reductase [ Bacillussubtilis ]2584YqfO2585Hypothetical protein yqfN [ BacillusUniRef100_P54471Bacillus subtilisYqfNsubtilis ]2586YwqL protein [ Bacillus subtilis ]UniRef100_P96724Bacillus subtilisYwqL25872588258925902591Hypothetical protein CAC0336UniRef100_Q97M62Clostridium acetobutylicum[ Clostridium acetobutylicum ]2592Hypothetical protein [ BacillusUniRef100_Q6HGF2Bacillus thuringiensisthuringiensis ]25932594YwqJ protein [ Bacillus subtilis ]UniRef100_P96722Bacillus subtilisYwqJ2595Hypothetical protein ywqI [ BacillusUniRef100_P96721Bacillus subtilissubtilis ]2596YwqH2597Cytochrome c-550 [ Bacillus subtilis ]UniRef100_P24469Bacillus subtilisCccA2598SigA2599DNA primase [ Bacillus subtilis ]UniRef100_P05096Bacillus subtilisDnaG2600Hypothetical UPF0178 protein yqxDUniRef100_P17868Bacillus subtilisYqxD[ Bacillus subtilis ]2601Hypothetical UPF0085 protein yqfLUniRef100_P54470Bacillus subtilisYqfL[ Bacillus subtilis ]2602YqzB protein [ Bacillus subtilis ]UniRef100_O34994Bacillus subtilisYqzB2603Glycyl-tRNA synthetase beta chainUniRef100_P54381Bacillus subtilisGlyS[ Bacillus subtilis ]2604Glycyl-tRNA synthetase alpha chainUniRef100_P54380Bacillus subtilisGlyQ[ Bacillus subtilis ]2605DNA repair protein recO [ BacillusUniRef100_P42095Bacillus subtilisRecOsubtilis ]26062607GTP-binding protein era homologUniRef100_P42182Bacillus subtilisEra[ Bacillus subtilis ]2608Cytidine deaminase [ Bacillus subtilis ]UniRef100_P19079Bacillus subtilisCdd26092610Hypothetical UPF0054 protein yqfGUniRef100_P46347Bacillus subtilisYqfG[ Bacillus subtilis ]2611Hypothetical protein yqfF [ BacillusUniRef100_P46344Bacillus subtilisYqfFsubtilis ]2612PhoH-like protein [ Bacillus subtilis ]UniRef100_P46343Bacillus subtilisPhoH2613YqfD2614Hypothetical protein yqfC [ BacillusUniRef100_P54468Bacillus subtilissubtilis ]2615Hypothetical protein yqfB [ BacillusUniRef100_P54467Bacillus subtilisYqfBsubtilis ]2616Hypothetical protein yqfA [ BacillusUniRef100_P54466Bacillus subtilisYqfAsubtilis ]2617YqeZ2618Hypothetical protein yqeY [ BacillusUniRef100_P54464Bacillus subtilisYqeYsubtilis ]26192620Hypothetical protein yqeW [ BacillusUniRef100_P54463Bacillus subtilisYqeWsubtilis ]2621Deoxyribose-phosphate aldolaseUniRef100_Q92A19Listeria innocuaDra[ Listeria innocua ]2622Hypothetical UPF0004 protein yqeVUniRef100_P54462Bacillus subtilisYqeV[ Bacillus subtilis ]2623Hypothetical UPF0088 protein yqeUUniRef100_P54461Bacillus subtilisYqeU[ Bacillus subtilis ]2624Ribosomal protein L11UniRef100_P54460Bacillus subtilisYqeTmethyltransferase [ Bacillus subtilis ]2625Chaperone protein dnaJ [ BacillusUniRef100_P17631Bacillus subtilisDnaJsubtilis ]2626DnaK262726282629Heat-inducible transcription repressorUniRef100_P25499Bacillus subtilisHrcAhrcA [ Bacillus subtilis ]2630Probable oxygen-independentUniRef100_P54304Bacillus subtilisHemNcoproporphyrinogen III oxidase[ Bacillus subtilis ]2631LepA2632Hypothetical protein yqxA [ BacillusUniRef100_P38425Bacillus subtilisYqxAsubtilis ]2633SpoIIP2634Germination protease precursorUniRef100_P22322Bacillus subtilisGpr[ Bacillus subtilis ]263530S ribosomal protein S20 [ BacillusUniRef100_P21477Bacillus subtilissubtilis ]2636Hypothetical protein yqeN [ BacillusUniRef100_P54459Bacillus subtilisYqeNsubtilis ]26372638ComE operon protein 3 [ BacillusUniRef100_P39695Bacillus subtilisComECsubtilis ]2639ComE operon protein 2 [ BacillusUniRef100_P32393Bacillus subtilisComEBsubtilis ]2640ComE operon protein 1 [ BacillusUniRef100_P39694Bacillus subtilisComEAsubtilis ]2641ComE operon protein 4 [ BacillusUniRef100_P39696Bacillus subtilisComERsubtilis ]2642Hypothetical protein yqeM [ BacillusUniRef100_P54458Bacillus subtilisYqeMsubtilis ]2643Hypothetical protein yqeL [ BacillusUniRef100_P54457Bacillus subtilisYqeLsubtilis ]2644Hypothetical protein yqeK [ BacillusUniRef100_P54456Bacillus subtilisYqeKsubtilis ]2645Nicotinate-nucleotideUniRef100_P54455Bacillus subtilisYqeJadenylyltransferase (EC 2.7.7.18)(Deamido-NAD(+) pyrophosphorylase)(Deamido-NAD(+) diphosphorylase)[ Bacillus subtilis ]2646Hypothetical UPF0044 protein yqeIUniRef100_P54454Bacillus subtilis[ Bacillus subtilis ]2647Shikimate dehydrogenase [ BacillusUniRef100_P54374Bacillus subtilisAroDsubtilis ]2648Hypothetical protein yqeH [ BacillusUniRef100_P54453Bacillus subtilisYqeHsubtilis ]2649Hypothetical protein yqeG [ BacillusUniRef100_P54452Bacillus subtilisYqeGsubtilis ]265026512652Hypothetical lipoprotein yqeF precursorUniRef100_P54451Bacillus subtilisYqeF[ Bacillus subtilis ]2653Acetyltransferase, GNAT familyUniRef100_Q81KW8BacillusYdfB[ Bacillus anthracis ]anthracis2654Hypothetical protein yrhF [ BacillusUniRef100_O05398Bacillus subtilisYrhFsubtilis ]2655Formate dehydrogenase chain AUniRef100_O05397Bacillus subtilisYrhE[ Bacillus subtilis ]2656Hypothetical protein yrhD [ BacillusUniRef100_O05396Bacillus subtilisYrhDsubtilis ]26572658RNA polymerase sigma-K factorUniRef100_P12254Bacillus subtilisSpoIIICprecursor [ Bacillus subtilis ]2659YcnB2660BH2157 protein [ Bacillus halodurans ]UniRef100_Q9KAX9BacillusYuaIhalodurans266126622663Alanyl-tRNA synthetase family proteinUniRef100_Q81Y73BacillusAlaS[ Bacillus anthracis ]anthracis2664METAL-ACTIVATED PYRIDOXALUniRef100_Q8YCI2Brucella melitensisENZYME [ Brucella melitensis ]2665Probable translation initiation inhibitorUniRef100_Q6LKM3PhotobacteriumYabJ[ Photobacterium profundum )]profundum )2666YccC2667Putative threonine synthaseUniRef100_Q82IF6StreptomycesThrC[ Streptomyces avermitilis ]avermitilis2668YabJ2669Hypothetical proteinUniRef100_Q8RBA0Thermoanaerobacter[ Thermoanaerobacter tengcongensis ]tengcongensis26702671UPI000032CE59 UniRef100 entryUniRef100_UPI000032CE592672Multidrug-efflux transporter 1 regulatorUniRef100_P39075Bacillus subtilisBmrR[ Bacillus subtilis ]2673Metallo-beta-lactamase/rhodanese-likeUniRef100_Q81Q95BacillusYrkHdomain protein [ Bacillus anthracis ]anthracis2674Hypothetical protein [ Bacillus cereusUniRef100_Q63B51Bacillus cereusYumBZK]ZK2675NreC [ Staphylococcus carnosus ]UniRef100_Q7WZY4StaphylococcusDegUcarnosus2676Two-component sensor histidineUniRef100_Q67JE7SymbiobacteriumDegSkinase [ Symbiobacteriumthermophilumthermophilum ]2677YdfQ protein [ Bacillus subtilis ]UniRef100_P96695Bacillus subtilisYdfQ2678Hypothetical Membrane SpanningUniRef100_Q813Y5Bacillus cereusYrkJProtein [ Bacillus cereus ]2679Hypothetical UPF0033 protein yrkIUniRef100_P54436Bacillus subtilis[ Bacillus subtilis ]2680UPI00003CB3C6 UniRef100 entryUniRef100_UPI00003CB3C6YrkH2681Molybdopterin biosynthesis MoeBUniRef100_Q81HL2Bacillus cereusYrkFprotein [ Bacillus cereus ]2682Hypothetical protein yrkE [ BacillusUniRef100_P54432Bacillus subtilisYrkEsubtilis ]2683Hypothetical conserved proteinUniRef100_Q8EN37Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2684S-adenosylmethionine-dependentUniRef100_Q97FB3ClostridiumYcgJmethyltransferase [ Clostridiumacetobutylicumacetobutylicum ]2685Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81N81Bacillus anthracis2686YciB protein [ Bacillus subtilis ]UniRef100_P94399Bacillus subtilis2687Acetylxylan esterase related enzymeUniRef100_Q97LM8Clostridium acetobutylicum[ Clostridium acetobutylicum ]2688Hypothetical UPF0161 proteinUniRef100_P61464Bacillus cereusBCE4947 [ Bacillus cereus ]2689Delta-aminolevulinic acid dehydrataseUniRef100_Q9K8G2Bacillus halodurans[ Bacillus halodurans ]26906-phospho-3-hexuloisomerase [ BacillusUniRef100_Q6TV53BacillusHxlBmethanolicus ]methanolicus2691Probable hexulose-6-phosphateUniRef100_P42405Bacillus subtilisHxlAsynthase [ Bacillus subtilis ]2692Transcriptional regulator [ BacillusUniRef100_Q70KJ9BacillusHxlRamyloliquefaciens ]amyloliquefaciens2693Fatty acid desaturase [ Bacillus subtilis ]UniRef100_O34653Bacillus subtilisDes2694Sensor kinase [ Bacillus subtilis ]UniRef100_O34757Bacillus subtilisYocF2695Sensor regulator [ Bacillus subtilis ]UniRef100_O34723Bacillus subtilisYocG2696UPI00003CC1E4 UniRef100 entryUniRef100_UPI00003CC1E4YcgT2697Nickel transport system [ BacillusUniRef100_Q9KFB8BacillusAppAhalodurans ]halodurans2698Nickel transport system [ BacillusUniRef100_Q9KFB7BacillusAppBhalodurans ]halodurans2699Nickel transport system [ BacillusUniRef100_Q9KFB6BacillusAppChalodurans ]halodurans2700Oligopeptide ABC transporter [ BacillusUniRef100_Q9KFB5BacillusDppDhalodurans ]halodurans2701Oligopeptide ABC transporter [ BacillusUniRef100_Q9KFB4BacillusAppFhalodurans ]halodurans2702UPI00003CB880 UniRef100 entryUniRef100_UPI00003CB880YdfL2703UPI00003CA374 UniRef100 entryUniRef100_UPI00003CA374YoeA2704PROBABLE TRANSCRIPTIONUniRef100_Q8XS91Ralstonia solanacearumREGULATOR PROTEIN [ Ralstoniasolanacearum ]2705Short chain dehydrogenase familyUniRef100_Q834I5EnterococcusYvaGprotein [ Enterococcus faecalis ]faecalis2706Uncharacterized protein, containingUniRef100_Q97L24Clostridium acetobutylicumpredicted phosphatase domain[ Clostridium acetobutylicum ]2707UPI000025758C UniRef100 entryUniRef100_UPI000025758CPnbA2708Cytochrome P450 [ Bacillus subtilis ]UniRef100_O08469Bacillus subtilisCypA2709YtnM [ Bacillus subtilis ]UniRef100_O34430Bacillus subtilisYtnM2710Hypothetical protein yndA precursorUniRef100_O31805Bacillus subtilisYndA[ Bacillus subtilis ]2711YvaG protein [ Bacillus subtilis ]UniRef100_O32229Bacillus subtilisYvaG2712Levanase precursor [ Bacillus subtilis ]UniRef100_P05656Bacillus subtilisSacC2713PTS system, fructose-specific IIDUniRef100_P26382Bacillus subtilisLevGcomponent [ Bacillus subtilis ]2714PTS system, fructose-specific IICUniRef100_P26381Bacillus subtilisLevFcomponent [ Bacillus subtilis ]2715PTS system, fructose-specific IIBUniRef100_P26380Bacillus subtilisLevEcomponent [ Bacillus subtilis ]2716PTS system, fructose-specific IIAUniRef100_P26379Bacillus subtilisLevDcomponent [ Bacillus subtilis ]2717Transcriptional regulatory protein levRUniRef100_P23914Bacillus subtilisLevR[ Bacillus subtilis ]2718Hypothetical protein [ Bacillus cereus ]UniRef100_Q734Q5Bacillus cereus2719Hypothetical protein yrhK [ BacillusUniRef100_O05401Bacillus subtilissubtilis ]2720UPI00003CB785 UniRef100 entryUniRef100_UPI00003CB7852721AdaA2722Methylated-DNA-protein-cysteine S-UniRef100_Q732Y7Bacillus cereusAdaBmethyltransferase [ Bacillus cereus ]2723Oxidoreductase, aldo/keto reductaseUniRef100_Q6HBJ5BacillusYtbEfamily [ Bacillus thuringiensis ]thuringiensis2724YtbD2725Hypothetical UPF0087 protein ytcDUniRef100_O34533Bacillus subtilisYtcD[ Bacillus subtilis ]27262727Hypothetical protein yjjA [ BacillusUniRef100_O34394Bacillus subtilisYjjAsubtilis ]2728UPI000028298B UniRef100 entryUniRef100_UPI000028298B2729YxeB2730Putative HTH-type transcriptionalUniRef100_P37499Bacillus subtilisYybEregulator yybE [ Bacillus subtilis ]2731Hypothetical transport protein yybFUniRef100_P37498Bacillus subtilisYybF[ Bacillus subtilis ]2732Hypothetical protein [ Bacillus cereus ]UniRef100_Q732J0Bacillus cereus2733Probable bifunctional P-450: NADPH-UniRef100_O08336Includes:YrhJP450 reductase 2 [Includes:CytochromeCytochrome P450 102 (EC 1.14.14.1);P450 102 (ECNADPH--cytochrome P450 reductase1.14.14.1);(EC 1.6.2.4)] [ Bacillus subtilis ]NADPH--cytochromeP450 reductase(EC 1.6.2.4)2734Regulatory protein [ Bacillus subtilis ]UniRef100_O08335Bacillus subtilisYrhI2735WprA2736YrhH [ Bacillus subtilis ]UniRef100_O05400Bacillus subtilisYrhH2737273827392740Cystathionine gamma-lyase [ BacillusUniRef100_O05394Bacillus subtilisYrhBsubtilis ]2741Cysteine synthase [ Bacillus subtilis ]UniRef100_O05393Bacillus subtilisYrhA2742MTA/SAH nucleosidase [ BacillusUniRef100_O32028Bacillus subtilisMtnsubtilis ]2743YrrT protein [ Bacillus subtilis ]UniRef100_O32029Bacillus subtilisYrrT2744Hypothetical protein yrzA [ BacillusUniRef100_O32030Bacillus subtilissubtilis ]2745YrrS2746YrrR protein [ Bacillus subtilis ]UniRef100_O32032Bacillus subtilisYrrR2747Transcription elongation factor greAUniRef100_P80240Bacillus subtilisGreA[ Bacillus subtilis ]2748Uridine kinase [ Bacillus subtilis ]UniRef100_O32033Bacillus subtilisUdk2749YrrO protein [ Bacillus subtilis ]UniRef100_O32034Bacillus subtilisYrrO2750YrrN protein [ Bacillus subtilis ]UniRef100_O32035Bacillus subtilisYrrN2751YrrM protein [ Bacillus subtilis ]UniRef100_O32036Bacillus subtilisYrrM2752YrrL protein [ Bacillus subtilis ]UniRef100_O34758Bacillus subtilisYrrL2753YrzB protein [ Bacillus subtilis ]UniRef100_O34828Bacillus subtilis2754Putative Holliday junction resolvaseUniRef100_O34634Bacillus subtilisYrrK[ Bacillus subtilis ]2755Hypothetical UPF0297 protein yrzLUniRef100_Q7WY61Bacillus subtilis[ Bacillus subtilis ]2756Alanyl-tRNA synthetase [ BacillusUniRef100_O34526Bacillus subtilisAlaSsubtilis ]2757Hypothetical UPF0118 protein yrrIUniRef100_O34472Bacillus subtilisYrrI[ Bacillus subtilis ]27582759Hypothetical protein [ Bacillus cereusUniRef100_Q634F2Bacillus cereus ZKZK]2760YrrD protein [ Bacillus subtilis ]UniRef100_O34402Bacillus subtilisYrrD2761YrrC protein [ Bacillus subtilis ]UniRef100_O34481Bacillus subtilisYrrC2762YrrB protein [ Bacillus subtilis ]UniRef100_O34452Bacillus subtilisYrrB2763Probable tRNA (5-methylaminomethyl-UniRef100_O35020Bacillus subtilisTrmU2-thiouridylate)-methyltransferase[ Bacillus subtilis ]2764YrvO protein [ Bacillus subtilis ]UniRef100_O34599Bacillus subtilisYrvO2765BH1259 protein [ Bacillus halodurans ]UniRef100_Q9KDF4Bacillus halodurans2766YrvN protein [ Bacillus subtilis ]UniRef100_O34528Bacillus subtilisYrvN2767YrvM protein [ Bacillus subtilis ]UniRef100_O32037Bacillus subtilisYrvM2768Aspartyl-tRNA synthetase [ BacillusUniRef100_O32038Bacillus subtilisAspSsubtilis ]2769Histidyl-tRNA synthetase [ BacillusUniRef100_O32039Bacillus subtilisHisSsubtilis ]27702771YrvJ2772Putative D-tyrosyl-tRNA(Tyr)UniRef100_O32042Bacillus subtilisYrvIdeacylase-like protein [ Bacillus subtilis ]2773GTP pyrophosphokinase (EC 2.7.6.5)UniRef100_O54408Bacillus subtilisRelA(ATP:GTP 3′-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGppsynthetase) [ Bacillus subtilis ]2774Adenine phosphoribosyltransferaseUniRef100_O34443Bacillus subtilisApt[ Bacillus subtilis ]2775YrvE protein [ Bacillus subtilis ]UniRef100_O32044Bacillus subtilisYrvE2776YrvD protein [ Bacillus subtilis ]UniRef100_O32045Bacillus subtilis2777SecDF protein [ Bacillus subtilis ]UniRef100_O32047Bacillus subtilisSecDF2778YrzD protein [ Bacillus subtilis ]UniRef100_O32049Bacillus subtilis2779SpoVB2780Hypothetical protein yrbG [ BacillusUniRef100_O32050Bacillus subtilisYrbGsubtilis ]2781YrzE protein [ Bacillus subtilis ]UniRef100_O32051Bacillus subtilisYrzE2782Hypothetical UPF0092 protein yrbFUniRef100_O32052Bacillus subtilis[ Bacillus subtilis ]2783Queuine tRNA-ribosyltransferaseUniRef100_O32053Bacillus subtilisTgt[ Bacillus subtilis ]2784S-adenosylmethionine:tRNAUniRef100_O32054Bacillus subtilisQueAribosyltransferase-isomerase [ Bacillussubtilis ]27852786Holliday junction DNA helicase ruvBUniRef100_O32055Bacillus subtilisRuvB[ Bacillus subtilis ]2787Holliday junction DNA helicase ruvAUniRef100_O05392Bacillus subtilisRuvA[ Bacillus subtilis ]2788BofC protein precursor [ BacillusUniRef100_O05391Bacillus subtilisBofCsubtilis ]2789Hypothetical conserved proteinUniRef100_Q8ERL7OceanobacillusYrzF[ Oceanobacillus iheyensis ]iheyensis27902791Small, acid-soluble spore protein HUniRef100_Q9KB75Bacillus halodurans[ Bacillus halodurans ]2792Hypothetical protein yjoA [ BacillusUniRef100_O34334Bacillus subtilisYjoAsubtilis ]2793YmaC protein [ Bacillus subtilis ]UniRef100_O31789Bacillus subtilisYmaC279427952796Hypothetical UPF0082 protein yrbCUniRef100_P94447Bacillus subtilisYrbC[ Bacillus subtilis ]2797Sporulation cortex protein coxAUniRef100_P94446Bacillus subtilisCoxA[ Bacillus subtilis ]2798Morphogenetic protein associated withUniRef100_O32062Bacillus subtilisSafASpoVID [ Bacillus subtilis ]2799Quinolinate synthetase A [ BacillusUniRef100_Q9KWZ1Bacillus subtilisNadAsubtilis ]2800Probable nicotinate-nucleotideUniRef100_P39666carboxylatingNadCpyrophosphorylase [ carboxylating ][ Bacillus subtilis ]2801L-aspartate oxidase [ Bacillus subtilis ]UniRef100_P38032Bacillus subtilisNadB2802Probable cysteine desulfurase [ BacillusUniRef100_P38033Bacillus subtilisNifSsubtilis ]2803YrxA2804Prephenate dehydratase [ BacillusUniRef100_P21203Bacillus subtilisPheAsubtilis ]2805ACT domain protein pheB [ BacillusUniRef100_P21204Bacillus subtilisPheBsubtilis ]2806Spo0B-associated GTP-binding proteinUniRef100_Q659J4BacillusObg[ Bacillus amyloliquefaciens ]amyloliquefaciens2807Sporulation initiationUniRef100_P06535Bacillus subtilisSpo0Bphosphotransferase B [ Bacillus subtilis ]280850S ribosomal protein L27 [ BacillusUniRef100_P05657Bacillus subtilissubtilis ]2809281050S ribosomal protein L21 [ BacillusUniRef100_P26908Bacillus subtilisRplUsubtilis ]2811Stage IV sporulation protein FBUniRef100_P26937Bacillus subtilisSpoIVFB[ Bacillus subtilis ]2812Stage IV sporulation protein FAUniRef100_P26936Bacillus subtilisSpoIVFA[ Bacillus subtilis ]2813Hypothetical protein [ Bacillus cereus ]UniRef100_Q816V6Bacillus cereusYndB2814Transcriptional regulator, ArsR familyUniRef100_Q632Y0Bacillus cereus ZK[ Bacillus cereus ZK]2815Septum site-determining protein minDUniRef100_Q01464Bacillus subtilisMinD[ Bacillus subtilis ]2816MinC2817Rod shape-determining protein mreDUniRef100_Q01467Bacillus subtilisMreD[ Bacillus subtilis ]2818Rod shape-determining protein mreCUniRef100_Q01466Bacillus subtilisMreC[ Bacillus subtilis ]2819Rod shape-determining protein mreBUniRef100_Q01465Bacillus subtilisMreB[ Bacillus subtilis ]2820DNA repair protein radC homologUniRef100_Q02170Bacillus subtilisRadC[ Bacillus subtilis ]2821Septum formation protein Maf [ BacillusUniRef100_Q02169Bacillus subtilisMafsubtilis ]2822Stage II sporulation protein B [ BacillusUniRef100_P37575Bacillus subtilisSpoIIBsubtilis ]2823Type 4 prepilin-like proteins leaderUniRef100_P15378Includes: LeaderComCpeptide processing enzyme (Latepeptidase (ECcompetence protein comC) [Includes:3.4.23.43)Leader peptidase (EC 3.4.23.43)(Prepilin(Prepilin peptidase); N-peptidase); N-methyltransferase (EC 2.1.1.—)]methyltransferase[ Bacillus subtilis ](EC 2.1.1.—)2824FolC2825Valyl-tRNA synthetase [ BacillusUniRef100_Q05873Bacillus subtilisValSsubtilis ]2826Hypothetical protein OB2062UniRef100_Q8EPN1Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2827Hypothetical protein ysxE [ BacillusUniRef100_P37964Bacillus subtilisYsxEsubtilis ]2828Stage VI sporulation protein D [ BacillusUniRef100_P37963Bacillus subtilisSpoVIDsubtilis ]2829Glutamate-1-semialdehyde 2,1-UniRef100_P30949Bacillus subtilisHemLaminomutase [ Bacillus subtilis ]2830Delta-aminolevulinic acid dehydrataseUniRef100_P30950Bacillus subtilisHemB[ Bacillus subtilis ]2831Uroporphyrinogen-III synthase [ BacillusUniRef100_P21248Bacillus subtilisHemDsubtilis ]2832Porphobilinogen deaminase [ BacillusUniRef100_P16616Bacillus subtilisHemCsubtilis ]2833Protein hemX [ Bacillus subtilis ]UniRef100_P16645Bacillus subtilisHemX2834Glutamyl-tRNA reductase [ BacillusUniRef100_P16618Bacillus subtilisHemAsubtilis ]2835Hypothetical protein ysxD [ BacillusUniRef100_P40736Bacillus subtilisYsxDsubtilis ]2836Probable GTP-binding protein engBUniRef100_P38424Bacillus subtilisYsxC[ Bacillus subtilis ]2837ATP-dependent protease La 1 [ BacillusUniRef100_P37945Bacillus subtilisLonAsubtilis ]2838ATP-dependent protease La homologUniRef100_P42425Bacillus subtilisLonB[ Bacillus subtilis ]2839ATP-dependent Clp protease ATP-UniRef100_P50866Bacillus subtilisClpXbinding subunit clpX [ Bacillus subtilis ]2840Trigger factor [ Bacillus subtilis ]UniRef100_P80698Bacillus subtilisTig2841Hypothetical protein ysoA [ BacillusUniRef100_P94569Bacillus subtilisYsoAsubtilis ]28423-isopropylmalate dehydratase smallUniRef100_P94568Bacillus subtilisLeuDsubunit [ Bacillus subtilis ]28433-isopropylmalate dehydratase largeUniRef100_P80858Bacillus subtilisLeuCsubunit [ Bacillus subtilis ]2844LeuB28452-isopropylmalate synthase [ BacillusUniRef100_P94565Bacillus subtilisLeuAsubtilis ]2846Ketol-acid reductoisomerase [ BacillusUniRef100_P37253Bacillus subtilisIlvCsubtilis ]2847Acetolactate synthase small subunitUniRef100_P37252Bacillus subtilisIlvH[ Bacillus subtilis ]2848Acetolactate synthase large subunitUniRef100_P37251Bacillus subtilisIlvB[ Bacillus subtilis ]2849Branched-chain amino acidUniRef100_Q6HLF7BacillusDataminotransferase [ Bacillusthuringiensisthuringiensis ]28502851RocG2852BH3337 protein [ Bacillus halodurans ]UniRef100_Q9K7M4Bacillus halodurans2853YxeD2854Hypothetical protein yqbA [ BacillusUniRef100_P45917Bacillus subtilissubtilis ]2855Hypothetical protein yqaT [ BacillusUniRef100_P45916Bacillus subtilisYqaTsubtilis ]2856Lin1266 protein [ Listeria innocua ]UniRef100_Q92CC3Listeria innocua2857Lin1733 protein [ Listeria innocua ]UniRef100_Q92B18Listeria innocua2858285928602861MtbP2862BH3535 protein [ Bacillus halodurans ]UniRef100_Q9K738Bacillus halodurans2863YeeF2864YxiD2865RapI2866286728682869Hypothetical UPF0025 protein ysnBUniRef100_P94559Bacillus subtilisYsnB[ Bacillus subtilis ]2870HAM1 protein homolog [ BacillusUniRef100_P94558Bacillus subtilisYsnAsubtilis ]2871Rph2872Germination protein gerM [ BacillusUniRef100_P39072Bacillus subtilisGerMsubtilis ]2873RacE2874Hypothetical protein ysmB [ BacillusUniRef100_P97247Bacillus subtilisYsmBsubtilis ]2875Germination protein gerE [ BacillusUniRef100_P11470Bacillus subtilissubtilis ]2876Oxidoreductase [ ClostridiumUniRef100_Q97TP7ClostridiumYqjQacetobutylicum]acetobutylicum2877Hypothetical protein ysmA [ BacillusUniRef100_Q6L874Bacillus subtilisYsmAsubtilis ]2878Succinate dehydrogenase iron-sulfurUniRef100_P08066Bacillus subtilisSdhBprotein [ Bacillus subtilis ]2879SdhA28802881Succinate dehydrogenase cytochromeUniRef100_P08064Bacillus subtilisSdhCB-558 subunit [ Bacillus subtilis ]2882Hypothetical protein yslB [ BacillusUniRef100_P42955Bacillus subtilisYslBsubtilis ]2883Aspartokinase 2 (EC 2.7.2.4)UniRef100_P08495Contains:LysC(Aspartokinase II) (Aspartate kinase 2)Aspartokinase II[Contains: Aspartokinase II alphaalpha subunit;subunit; Aspartokinase II beta subunit]Aspartokinase II[ Bacillus subtilis ]beta subunit2884UvrABC system protein C [ BacillusUniRef100_P14951Bacillus subtilisUvrCsubtilis ]2885Thioredoxin [ Bacillus subtilis ]UniRef100_P14949Bacillus subtilisTrxA2886Electron transfer flavoprotein alpha-UniRef100_P94551Bacillus subtilisEtfAsubunit [ Bacillus subtilis ]2887Electron transfer flavoprotein beta-UniRef100_P94550Bacillus subtilisEtfBsubunit [ Bacillus subtilis ]2888Hypothetical protein ysiB [ BacillusUniRef100_P94549Bacillus subtilisYsiBsubtilis ]2889Hypothetical protein ysiA [ BacillusUniRef100_P94548Bacillus subtilisYsiAsubtilis ]2890Long-chain-fatty-acid-CoA ligaseUniRef100_P94547Bacillus subtilisLcfA[ Bacillus subtilis ]2891Hypothetical protein yshE [ BacillusUniRef100_P94546Bacillus subtilisYshEsubtilis ]2892MutS2 protein [ Bacillus subtilis ]UniRef100_P94545Bacillus subtilisMutSB2893Hypothetical protein yshC [ BacillusUniRef100_P94544Bacillus subtilisYshCsubtilis ]2894YshB28952896Ribonuclease HIII [ Bacillus subtilis ]UniRef100_P94541Bacillus subtilisRnhC28972898289929002901YxlF29022903Phenylalanyl-tRNA synthetase betaUniRef100_P17922Bacillus subtilisPheTchain [ Bacillus subtilis ]2904Phenylalanyl-tRNA synthetase alphaUniRef100_Q659J3BacillusPheSchain [ Bacillus amyloliquefaciens ]amyloliquefaciens2905Hypothetical protein ysgA [ BacillusUniRef100_P94538Bacillus subtilisYsgAsubtilis ]2906Small, acid-soluble spore protein IUniRef100_P94537Bacillus subtilis[ Bacillus subtilis ]2907Carbon starvation protein A homologUniRef100_P94532Bacillus subtilisCstA[ Bacillus subtilis ]2908Alpha-N-arabinofuranosidase [ BacillusUniRef100_Q9XBQ3BacillusAbfAstearothermophilus ]stearothermophilus2909L-arabinose transport systemUniRef100_P94530Bacillus subtilisAraQpermease protein araQ [ Bacillussubtilis ]2910L-arabinose transport systemUniRef100_P94529Bacillus subtilisAraPpermease protein araP [ Bacillussubtilis ]2911Probable arabinose-binding proteinUniRef100_P94528Bacillus subtilisAraNprecursor [ Bacillus subtilis ]2912Arabinose operon protein araMUniRef100_P94527Bacillus subtilisAraM[ Bacillus subtilis ]2913L-ribulose-5-phosphate 4-epimeraseUniRef100_P94525Bacillus subtilisAraD[ Bacillus subtilis ]2914Ribulokinase [ Bacillus subtilis ]UniRef100_P94524Bacillus subtilisAraB2915L-arabinose isomerase [ BacillusUniRef100_P94523Bacillus subtilisAraAsubtilis ]2916AbnA2917Hypothetical protein ysdC [ BacillusUniRef100_P94521Bacillus subtilisYsdCsubtilis ]2918Hypothetical protein ysdB [ BacillusUniRef100_P94520Bacillus subtilisYsdBsubtilis ]2919Hypothetical protein ysdA [ BacillusUniRef100_P94519Bacillus subtilissubtilis ]292050S ribosomal protein L20 [ BacillusUniRef100_P55873Bacillus subtilisRplTsubtilis ]292150S ribosomal protein L35 [ BacillusUniRef100_P55874Bacillus subtilissubtilis ]2922InfC2923Antiholin-like protein IrgB [ BacillusUniRef100_P94516Bacillus subtilisYsbBsubtilis ]2924Antiholin-like protein IrgA [ BacillusUniRef100_P94515Bacillus subtilisYsbAsubtilis ]2925PhoD2926Sensory transduction protein lytTUniRef100_P94514Bacillus subtilisLytT[ Bacillus subtilis ]2927Sensor protein lytS [ Bacillus subtilis ]UniRef100_P94513Bacillus subtilisLytS2928Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81N00Bacillus anthracis2929Hypothetical protein ysaA [ BacillusUniRef100_P94512Bacillus subtilisYsaAsubtilis ]2930Threonyl-tRNA synthetase 1 [ BacillusUniRef100_P18255Bacillus subtilisThrSsubtilis ]2931Hypothetical protein ytxC [ BacillusUniRef100_P06569Bacillus subtilisYtxCsubtilis ]2932Hypothetical UPF0043 protein ytxBUniRef100_P06568Bacillus subtilisYtxB[ Bacillus subtilis ]2933Primosomal protein dnal [ BacillusUniRef100_P06567Bacillus subtilisDnaIsubtilis ]2934Replication initiation and membraneUniRef100_P07908Bacillus subtilisDnaBattachment protein [ Bacillus subtilis ]2935Hypothetical UPF0168 protein ytcGUniRef100_Q45549Bacillus subtilisYtcG[ Bacillus subtilis ]29362937SpeD2938GapB2939Pectin lyase [ Bacillus subtilis ]UniRef100_P94449Bacillus subtilisPelB2940Dephospho-CoA kinase [ BacillusUniRef100_O34932Bacillus subtilisYtaGsubtilis ]2941YtaF2942Formamidopyrimidine-DNA glycosylaseUniRef100_O34403Bacillus subtilisMutM[ Bacillus subtilis ]2943DNA polymerase I [ Bacillus subtilis ]UniRef100_O34996Bacillus subtilisPolA2944Alkaline phosphatase synthesis sensorUniRef100_P23545Bacillus subtilisPhoRprotein phoR [ Bacillus subtilis ]2945Alkaline phosphatase synthesisUniRef100_P13792Bacillus subtilisPhoPtranscriptional regulatory protein phoP[ Bacillus subtilis ]2946Malate dehydrogenase [ BacillusUniRef100_P49814Bacillus subtilisMdhsubtilis ]2947Isocitrate dehydrogenase [NADP]UniRef100_P39126NADPIcd[ Bacillus subtilis ]2948Citrate synthase II [ Bacillus subtilis ]UniRef100_P39120Bacillus subtilisCitZ2949YtwI [ Bacillus subtilis ]UniRef100_O34811Bacillus subtilisYtwI2950Hypothetical UPF0118 protein ytvIUniRef100_O34991Bacillus subtilisYtvI[ Bacillus subtilis ]2951YtzA protein [ Bacillus subtilis ]UniRef100_O32064Bacillus subtilisYtzA2952Pyk29536-phosphofructokinase [ BacillusUniRef100_O34529Bacillus subtilisPfkAsubtilis ]2954Acetyl-coenzyme A carboxylaseUniRef100_O34847Bacillus subtilisAccAcarboxyl transferase subunit alpha[ Bacillus subtilis ]2955Acetyl-CoA carboxylase subunitUniRef100_O34571Bacillus subtilisAccD[ Bacillus subtilis ]2956YtsJ2957DNA polymerase III alpha subunitUniRef100_O34623Bacillus subtilisDnaE[ Bacillus subtilis ]2958Hypothetical Membrane SpanningUniRef100_Q812P3Bacillus cereusProtein [ Bacillus cereus ]2959YtrI [ Bacillus subtilis ]UniRef100_O34460Bacillus subtilisYtrI2960BH3172 protein [ Bacillus halodurans ]UniRef100_Q9K835Bacillus halodurans2961YtqI [ Bacillus subtilis ]UniRef100_O34600Bacillus subtilisYtqI2962YtpI [ Bacillus subtilis ]UniRef100_O34922Bacillus subtilis2963YtoI2964PadR2965YtkL protein [ Bacillus subtilis ]UniRef100_Q795U4Bacillus subtilisYtkL2966YtkK29672968Argininosuccinate lyase [ BacillusUniRef100_O34858Bacillus subtilisArgHsubtilis ]2969Argininosuccinate synthase [ BacillusUniRef100_O34347Bacillus subtilisArgGsubtilis ]2970Molybdenum cofactor biosynthesisUniRef100_O34457Bacillus subtilisMoaBprotein B [ Bacillus subtilis ]2971AckA2972Hypothetical protein ytxK [ BacillusUniRef100_P37876Bacillus subtilisYtxKsubtilis ]2973Probable thiol peroxidase [ BacillusUniRef100_P80864Bacillus subtilisTpxsubtilis ]2974YtfJ [ Bacillus subtilis ]UniRef100_O34806Bacillus subtilisYtfJ2975YtfI2976YteJ [ Bacillus subtilis ]UniRef100_O34424Bacillus subtilisYteJ2977Putative signal peptide peptidase sppAUniRef100_O34525Bacillus subtilisSppA[ Bacillus subtilis ]2978Probable inorganicUniRef100_O34934Bacillus subtilisYtdIpolyphosphate/ATP-NAD kinase 2 (EC2.7.1.23) (Poly(P)/ATP NAD kinase 2)[ Bacillus subtilis ]2979YhbJ protein [ Bacillus subtilis ]UniRef100_O31593Bacillus subtilisYhbJ2980Multidrug resistance proteinUniRef100_Q8CQB1StaphylococcusYubD[ Staphylococcus epidermidis ]epidermidis2981Putative HTH-type transcriptionalUniRef100_P42103Bacillus subtilisYxaDregulator yxaD [ Bacillus subtilis ]2982YtcI [ Bacillus subtilis ]UniRef100_O34613Bacillus subtilisYtcI2983Small, acid-soluble spore protein 1UniRef100_P06552Bacillus stearothermophilus[ Bacillus stearothermophilus ]2984Probable thiamine biosynthesis proteinUniRef100_O34595Bacillus subtilisYtbJthil [ Bacillus subtilis ]2985NifS2 [ Bacillus subtilis ]UniRef100_O34874Bacillus subtilisNifZ2986Branched-chain amino acid transportUniRef100_O34545Bacillus subtilisBraBsystem carrier protein braB [ Bacillussubtilis ]2987IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]2988UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0692989Septation ring formation regulator ezrAUniRef100_O34894Bacillus subtilisEzrA[ Bacillus subtilis ]2990Histidinol-phosphatase [ BacillusUniRef100_O34411Bacillus subtilisHisJsubtilis ]2991Probable HTH-type transcriptionalUniRef100_O34970Bacillus subtilisYttPregulator yttP [ Bacillus subtilis ]2992Hypothetical conserved proteinUniRef100_Q8EPB0Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]2993YtrP [ Bacillus subtilis ]UniRef100_O34325Bacillus subtilisYtrP299430S ribosomal protein S4 [ BacillusUniRef100_P21466Bacillus subtilisRpsDsubtilis ]299529962997YddR2998HTH-type transcriptional regulator lrpAUniRef100_P96652Bacillus subtilisLrpA[ Bacillus subtilis ]29993000Tyrosyl-tRNA synthetase 1 [ BacillusUniRef100_P22326Bacillus subtilisTyrSsubtilis ]3001Acetyl-coenzyme A synthetaseUniRef100_P39062Bacillus subtilisAcsA[ Bacillus subtilis ]3002Acetoin utilization protein acuAUniRef100_P39065Bacillus subtilisAcuA[ Bacillus subtilis ]3003Acetoin utilization acuB proteinUniRef100_P39066Bacillus subtilisAcuB[ Bacillus subtilis ]3004Acetoin utilization protein acuCUniRef100_P39067Bacillus subtilisAcuC[ Bacillus subtilis ]3005Hypothetical protein ytxE [ BacillusUniRef100_P39064Bacillus subtilisYtxEsubtilis ]3006Hypothetical protein ytxD [ BacillusUniRef100_P39063Bacillus subtilisYtxDsubtilis ]3007Catabolite control protein A [ BacillusUniRef100_P25144Bacillus subtilisCcpAsubtilis ]3008AroA(G) protein [Includes: Phospho-2-UniRef100_P39912Includes:AroAdehydro-3-deoxyheptonate aldolasePhospho-2-(EC 2.5.1.54) (Phospho-2-keto-3-dehydro-3-deoxyheptonate aldolase) (DAHPdeoxyheptonatesynthetase) (3-deoxy-D-arabino-aldolase (ECheptulosonate 7-phosphate synthase);2.5.1.54)Chorismate mutase (EC 5.4.99.5)](Phospho-2-[ Bacillus subtilis ]keto-3-deoxyheptonatealdolase) (DAHPsynthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphatesynthase);Chorismatemutase (EC5.4.99.5)3009Similar to hypothetical repeatUniRef100_Q7N3B8Photorhabdus luminescenscontaining protein [ Photorhabdusluminescens ]3010Hypothetical protein ytxJ [ BacillusUniRef100_P39914Bacillus subtilisYtxJsubtilis ]3011Hypothetical protein ytxH [ BacillusUniRef100_P40780Bacillus subtilisYtxHsubtilis ]3012Hypothetical protein ytxG [ BacillusUniRef100_P40779Bacillus subtilisYtxGsubtilis ]3013MurC3014YtpT [ Bacillus subtilis ]UniRef100_O34749Bacillus subtilisYtpT3015YtpR [ Bacillus subtilis ]UniRef100_O34943Bacillus subtilisYtpR3016YtpQ [ Bacillus subtilis ]UniRef100_O34496Bacillus subtilisYtpQ3017Putative thioredoxin [ Bacillus subtilis ]UniRef100_O34357Bacillus subtilisYtpP3018YtoQ [ Bacillus subtilis ]UniRef100_O34305Bacillus subtilisYtoQ3019YtoP [ Bacillus subtilis ]UniRef100_O34924Bacillus subtilisYtoP3020YtzB protein [ Bacillus subtilis ]UniRef100_O32065Bacillus subtilisYtzB3021Probable NAD-dependent malicUniRef100_O34389Bacillus subtilisMalSenzyme 3 [ Bacillus subtilis ]3022YtnP [ Bacillus subtilis ]UniRef100_O34760Bacillus subtilisYtnP3023tRNA (guanine-N(7)-)-UniRef100_O34522Bacillus subtilisYtmQmethyltransferase (EC 2.1.1.33)(tRNA(m7G46)-methyltransferase)[ Bacillus subtilis ]3024YtzH protein [ Bacillus subtilis ]UniRef100_O32066Bacillus subtilis3025YtmP [ Bacillus subtilis ]UniRef100_O34935Bacillus subtilisYtmP3026AmyX protein [ Bacillus subtilis ]UniRef100_O34587Bacillus subtilisAmyX3027YtlR [ Bacillus subtilis ]UniRef100_O34799Bacillus subtilisYtlR3028YtlQ [ Bacillus subtilis ]UniRef100_O34471Bacillus subtilisYtlQ3029Hypothetical UPF0097 protein ytlPUniRef100_O34570Bacillus subtilisYtlP[ Bacillus subtilis ]3030Probable cysteine synthase (ECUniRef100_O34476Bacillus subtilisYtkP2.5.1.47) (O-acetylserine sulfhydrylase)(O-acetylserine (Thiol)-lyase) [ Bacillussubtilis ]3031Hypothetical protein [ Bacillus cereus ]UniRef100_Q81BR8Bacillus cereusYncE3032Putative peptidase [ Bacillus subtilis ]UniRef100_O34944Bacillus subtilisYtjP3033YtiP [ Bacillus subtilis ]UniRef100_O34978Bacillus subtilisYtiP3034YtzE protein [ Bacillus subtilis ]UniRef100_O32067Bacillus subtilis3035Ribosomal small subunit pseudouridineUniRef100_Q816W1Bacillus cereusYtzFsynthase A [ Bacillus cereus ]3036YtgP [ Bacillus subtilis ]UniRef100_O34674Bacillus subtilisYtgP3037YtfP [ Bacillus subtilis ]UniRef100_O30505Bacillus subtilisYtfP3038OpuD3039Protein cse60 [ Bacillus subtilis ]UniRef100_P94496Bacillus subtilis3040Rhodanese-like domain proteinUniRef100_Q72YZ9Bacillus cereus[ Bacillus cereus ]3041RapA3042Hypothetical protein [ BacillusUniRef100_Q6HI31Bacillus thuringiensisthuringiensis ]3043YteU [ Bacillus subtilis ]UniRef100_O34378Bacillus subtilisYteU3044YteT3045YteS3046YteR [ Bacillus subtilis ]UniRef100_O34559Bacillus subtilisYteR3047Transmembrane lipoprotein [ BacillusUniRef100_Q9KFJ5BacillusLplBhalodurans ]halodurans3048YtdP protein [ Bacillus subtilis ]UniRef100_O32071Bacillus subtilisYtdP3049YtcQ protein [ Bacillus subtilis ]UniRef100_Q795R2Bacillus subtilisYtcQ3050YtcP3051Hypothetical protein ytbQ [ BacillusUniRef100_P53560Bacillus subtilisYtbQsubtilis ]3052YtaP [ Bacillus subtilis ]UniRef100_O34973Bacillus subtilisYtaP3053Amino acid/polyamine transporter;UniRef100_Q6LYX9MethanococcusYecAfamily I [ Methanococcus maripaludis ]maripaludis3054Transcriptional regulator, LysR familyUniRef100_Q97DX1ClostridiumYwqM[ Clostridium acetobutylicum ]acetobutylicum3055Prolyl endopeptidase [ Bacillus cereus ]UniRef100_Q81C54Bacillus cereusYycE3056Leucyl-tRNA synthetase [ BacillusUniRef100_P36430Bacillus subtilisLeuSsubtilis ]3057YtvB3058YttB [ Bacillus subtilis ]UniRef100_O34546Bacillus subtilisYttB3059Lipoprotein [ Oceanobacillus iheyensis ]UniRef100_Q8EPK3OceanobacillusYusAiheyensis3060YttA [ Bacillus subtilis ]UniRef100_O30500Bacillus subtilisYttA3061YtrF [ Bacillus subtilis ]UniRef100_O35005Bacillus subtilisYtrF3062Hypothetical ABC transporter ATP-UniRef100_O34392Bacillus subtilisYtrEbinding protein ytrE [ Bacillus subtilis ]3063YtrC [ Bacillus subtilis ]UniRef100_O34898Bacillus subtilisYtrC3064Transporter [ Bacillus subtilis ]UniRef100_O34641Bacillus subtilisYtrB3065Transcription regulator [ BacillusUniRef100_O34712Bacillus subtilisYtrAsubtilis ]3066Hypothetical protein ytzC [ BacillusUniRef100_O32073Bacillus subtilissubtilis ]3067YtqA [ Bacillus subtilis ]UniRef100_O35008Bacillus subtilisYtqA3068YtqB3069Proton glutamate symport proteinUniRef100_P39817Bacillus subtilisGltP[ Bacillus subtilis ]3070Hypothetical protein ytpB [ BacillusUniRef100_O34707Bacillus subtilisYtpBsubtilis ]3071Probable lysophospholipase [ BacillusUniRef100_O34705Bacillus subtilisYtpAsubtilis ]3072YtoA [ Bacillus subtilis ]UniRef100_O34696Bacillus subtilisYtoA3073YwoA3074Glycosyl transferase, group 1 familyUniRef100_Q6HCB9BacillusTuaC[ Bacillus thuringiensis ]thuringiensis3075Asparagine synthetase [glutamine-UniRef100_P54420glutamine-AsnBhydrolyzing] 1 [ Bacillus subtilis ]hydrolyzing3076S-adenosylmethionine synthetaseUniRef100_P54419Bacillus subtilisMetK[ Bacillus subtilis ]3077Phosphoenolpyruvate carboxykinaseUniRef100_P54418ATPPckA[ATP] [ Bacillus subtilis ]3078Sodium:dicarboxylate symporterUniRef100_Q8EP16OceanobacillusDctP[ Oceanobacillus iheyensis ]iheyensis3079Hypothetical protein ytmB [ BacillusUniRef100_O34365Bacillus subtilissubtilis ]3080Putative peptidase [ Bacillus subtilis ]UniRef100_O34493Bacillus subtilisYtmA3081ABC transporter substrate-bindingUniRef100_Q816P5Bacillus cereusYtlAprotein [ Bacillus cereus ]3082Putative transporter [ Bacillus subtilis ]UniRef100_O34314Bacillus subtilisYtlC3083YtlD3084YtkD [ Bacillus subtilis ]UniRef100_O35013Bacillus subtilisYtkD3085Hypothetical protein [ BacillusUniRef100_Q6HC91Bacillus thuringiensisthuringiensis ]3086Hypothetical protein ytkC [ BacillusUniRef100_O34883Bacillus subtilisYtkCsubtilis ]3087General stress protein 20U [ BacillusUniRef100_P80879Bacillus subtilisDpssubtilis ]3088Hypothetical protein ytkA [ BacillusUniRef100_P40768Bacillus subtilisYtkAsubtilis ]3089S-ribosylhomocysteinase [ BacillusUniRef100_O34667Bacillus subtilisLuxSsubtilis ]3090Hypothetical UPF0161 protein ytjAUniRef100_O34601Bacillus subtilis[ Bacillus subtilis ]3091YtiB [ Bacillus subtilis ]UniRef100_O34872Bacillus subtilisYtiB3092Low-affinity zinc transport proteinUniRef100_Q81F90Bacillus cereusYciC[ Bacillus cereus ]3093High-affinity zinc uptake system proteinUniRef100_Q81EF8Bacillus cereusYcdHznuA [ Bacillus cereus ]309450S ribosomal protein L31 type BUniRef100_O34967Bacillus subtilis[ Bacillus subtilis ]3095YthA [ Bacillus subtilis ]UniRef100_O34655Bacillus subtilisYthA3096YthB [ Bacillus subtilis ]UniRef100_O34505Bacillus subtilisYthB3097Hypothetical protein [ Bacillus cereus ]UniRef100_Q737J1Bacillus cereus30983099O-succinylbenzoate synthase (ECUniRef100_O34514Bacillus subtilisMenC4.2.1.—) (OSB synthase) (OSBS) (4-(2′-carboxyphenyl)-4-oxybutyric acidsynthase) [ Bacillus subtilis ]3100O-succinylbenzoate--CoA ligaseUniRef100_P23971Bacillus subtilisMenE[ Bacillus subtilis ]3101Naphthoate synthase [ Bacillus subtilis ]UniRef100_P23966Bacillus subtilisMenB3102YtxM3103Menaquinone biosynthesis proteinUniRef100_P23970Includes: 2-MenDmenD [Includes: 2-succinyl-6-hydroxy-succinyl-6-2,4-cyclohexadiene-1-carboxylatehydroxy-2,4-synthase (EC 2.5.1.64) (SHCHCcyclohexadiene-synthase); 2-oxoglutarate1-carboxylatedecarboxylase (EC 4.1.1.71) (Alpha-synthase (ECketoglutarate decarboxylase) (KDC)]2.5.1.64)[ Bacillus subtilis ](SHCHCsynthase); 2-oxoglutaratedecarboxylase(EC 4.1.1.71)(Alpha-ketoglutaratedecarboxylase)(KDC)3104Menaquinone-specific isochorismateUniRef100_P23973Bacillus subtilisMenFsynthase [ Bacillus subtilis ]3105Probable 1,4-dihydroxy-2-naphthoateUniRef100_P39582Bacillus subtilisMenAoctaprenyltransferase [ Bacillus subtilis ]3106Hypothetical protein yteA [ BacillusUniRef100_P42408Bacillus subtilisYteAsubtilis ]3107Glycogen phosphorylase [ BacillusUniRef100_P39123Bacillus subtilisGlgPsubtilis ]3108Glycogen synthase [ Bacillus subtilis ]UniRef100_P39125Bacillus subtilisGlgA3109Glycogen biosynthesis protein glgDUniRef100_P39124Bacillus subtilisGlgD[ Bacillus subtilis ]3110Glucose-1-phosphateUniRef100_P39122Bacillus subtilisGlgCadenylyltransferase [ Bacillus subtilis ]31111,4-alpha-glucan branching enzymeUniRef100_P39118Bacillus subtilisGlgB[ Bacillus subtilis ]3112AraR3113YuaJ protein [ Bacillus subtilis ]UniRef100_O32074Bacillus subtilisYuaJ3114BH4010 protein [ Bacillus halodurans ]UniRef100_Q9K5S8BacillusYhcShalodurans3115BH4011 protein [ Bacillus halodurans ]UniRef100_Q9K5S7Bacillus halodurans31163117RapD3118Pyrrolidone-carboxylate peptidaseUniRef100_P46107BacillusPcp[ Bacillus amyloliquefaciens ]amyloliquefaciens3119BH0597 protein [ Bacillus halodurans ]UniRef100_Q9KF88BacillusYuaAhalodurans3120YubG3121YxxF3122YuaE protein [ Bacillus subtilis ]UniRef100_O32078Bacillus subtilisYuaE3123YuaD protein [ Bacillus subtilis ]UniRef100_O32079Bacillus subtilisYuaD3124Alcohol dehydrogenase [ BacillusUniRef100_P71017Bacillus subtilisGbsBsubtilis ]3125Betaine aldehyde dehydrogenaseUniRef100_P71016Bacillus subtilisGbsA[ Bacillus subtilis ]3126Hypothetical protein yuaC [ BacillusUniRef100_P71015Bacillus subtilisYuaCsubtilis ]3127UPI00002D3D35 UniRef100 entryUniRef100_UPI00002D3D35OpuE3128Hypothetical protein yktD [ BacillusUniRef100_Q45500Bacillus subtilisYktDsubtilis ]3129Alanine racemase 2 [ Bacillus subtilis ]UniRef100_P94494Bacillus subtilisYncD3130Oxalate decarboxylase [ BacillusUniRef100_Q81GZ6Bacillus cereusYoaNcereus ]3131Hypothetical protein CAC0135UniRef100_Q97MQ7Clostridium acetobutylicum[ Clostridium acetobutylicum ]3132Hypothetical protein [ BacillusUniRef100_Q6HGC9Bacillus thuringiensisthuringiensis ]3133Hypothetical protein [ BacillusUniRef100_Q6HGC8Bacillus thuringiensisthuringiensis ]31343135Hypothetical protein [ BacillusUniRef100_Q6HGC6Bacillus thuringiensisthuringiensis ]3136Hypothetical protein [ BacillusUniRef100_Q6HGC5Bacillus thuringiensisthuringiensis ]3137Hypothetical conserved proteinUniRef100_Q8ETF5Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]313831393140YkoN [ Bacillus subtilis ]UniRef100_O34625Bacillus subtilisYkoN3141Hypothetical protein ykoP [ BacillusUniRef100_O34495Bacillus subtilisYkoPsubtilis ]3142Hypothetical UPF0151 protein ykoQUniRef100_O35040Bacillus subtilisYkoQ[ Bacillus subtilis ]3143Undecaprenyl-diphosphatase [ BacillusUniRef100_P94507Bacillus subtilisYubBsubtilis ]3144Hypothetical UPF0118 protein yubAUniRef100_O32086Bacillus subtilisYubA[ Bacillus subtilis ]3145Hypothetical oxidoreductase yulFUniRef100_O05265Bacillus subtilisYulF[ Bacillus subtilis ]3146Lmo2256 protein [ ListeriaUniRef100_Q929B9ListeriaYraAmonocytogenes ]monocytogenes3147McpA3148McpA3149McpA3150Protein-glutamine gamma-UniRef100_P40746Bacillus subtilisTglglutamyltransferase [ Bacillus subtilis ]31512-nitropropane dioxygenase [ BacillusUniRef100_O05413Bacillus subtilisYrpBsubtilis ]3152Hypothetical UPF0047 protein yugUUniRef100_O05243Bacillus subtilisYugU[ Bacillus subtilis ]3153Hypothetical protein yugT [ BacillusUniRef100_O05242Bacillus subtilisYugTsubtilis ]3154Transcriptional regulator, TetR familyUniRef100_Q81GX6Bacillus cereusYfiR[ Bacillus cereus ]3155Hypothetical protein yqeB [ BacillusUniRef100_P54447Bacillus subtilisYqeBsubtilis ]3156Beta(1,4)-glucan glucanohydrolaseUniRef100_Q6D3B7Erwinia carotovora[ Erwinia carotovora ]3157Hypothetical UPF0053 protein yugSUniRef100_O05241Bacillus subtilisYugS[ Bacillus subtilis ]3158Hypothetical protein yugP [ BacillusUniRef100_O05248Bacillus subtilisYugPsubtilis ]3159YugO protein [ Bacillus subtilis ]UniRef100_Q795M8Bacillus subtilis3160Hypothetical protein yugN [ BacillusUniRef100_O05246Bacillus subtilisYugNsubtilis ]3161Hypothetical protein [ BacillusUniRef100_Q6HIW1BacillusYdfRthuringiensis ]thuringiensis3162YtaB protein [ Bacillus subtilis ]UniRef100_O34694Bacillus subtilisYtaB3163Predicted acetyltransferaseUniRef100_Q97IT3ClostridiumYkkB[ Clostridium acetobutylicum ]acetobutylicum3164Glucose-6-phosphate isomeraseUniRef100_P80860Bacillus subtilisPgi[ Bacillus subtilis ]3165Probable NADH-dependent butanolUniRef100_O05239Bacillus subtilisYugJdehydrogenase 1 [ Bacillus subtilis ]3166YuzA protein [ Bacillus subtilis ]UniRef100_O32087Bacillus subtilis3167General stress protein 13 [ BacillusUniRef100_P80870Bacillus subtilisYugIsubtilis ]3168Alanine transaminase [ Bacillus subtilis ]UniRef100_Q795M6Bacillus subtilisAlaT3169Transcriptional regulator [ BacillusUniRef100_O05236Bacillus subtilisAlaRsubtilis ]3170Hypothetical protein yugF [ BacillusUniRef100_O05235Bacillus subtilisYugFsubtilis ]3171Hypothetical protein yugE [ BacillusUniRef100_O05234Bacillus subtilissubtilis ]3172Hypothetical protein SMU.305UniRef100_Q9X669Streptococcus mutans[ Streptococcus mutans ]3173Putative aminotransferase B [ BacillusUniRef100_Q08432Bacillus subtilisPatBsubtilis ]31743175Kinase-associated lipoprotein BUniRef100_Q08429Bacillus subtilisKapBprecursor [ Bacillus subtilis ]3176Hypothetical protein yugB [ BacillusUniRef100_O05231Bacillus subtilisKapDsubtilis ]3177YuxJ3178PbpD3179Hypothetical protein yuxK [ BacillusUniRef100_P40761Bacillus subtilisYuxKsubtilis ]3180Hypothetical protein yufK [ BacillusUniRef100_O05249Bacillus subtilisYufKsubtilis ]3181Hypothetical protein yufL [ BacillusUniRef100_O05250Bacillus subtilisYufLsubtilis ]3182Hypothetical protein yufM [ BacillusUniRef100_O05251Bacillus subtilisYufMsubtilis ]31833184UPI00003CB938 UniRef100 entryUniRef100_UPI00003CB938PssA3185Hypothetical protein ybfM [ BacillusUniRef100_O31453Bacillus subtilisYbfMsubtilis ]3186Phosphatidylserine decarboxylaseUniRef100_Q6HDI5BacillusPsd[ Bacillus thuringiensis ]thuringiensis3187UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0693188IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]3189Na(+)-malate symporter [ BacillusUniRef100_O05256Bacillus subtilisMaeNsubtilis ]31903191Na(+)/H(+) antiporter subunit AUniRef100_Q9K2S2Bacillus subtilisMrpA[ Bacillus subtilis ]3192Na(+)/H(+) antiporter subunit BUniRef100_O05259Bacillus subtilisMrpB[ Bacillus subtilis ]3193Na(+)/H(+) antiporter subunit CUniRef100_O05260Bacillus subtilisMrpC[ Bacillus subtilis ]3194Na(+)/H(+) antiporter subunit DUniRef100_O05229Bacillus subtilisMrpD[ Bacillus subtilis ]3195Na(+)/H(+) antiporter subunit EUniRef100_Q7WY60Bacillus subtilisMrpE[ Bacillus subtilis ]3196Na(+)/H(+) antiporter subunit FUniRef100_O05228Bacillus subtilis[ Bacillus subtilis ]3197Na(+)/H(+) antiporter subunit GUniRef100_O05227Bacillus subtilisMrpG[ Bacillus subtilis ]3198YuxO3199ComA3200ComP3201IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]3202UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0693203ComP32043205ComQ [ Bacillus subtilis ]UniRef100_Q9K5L3Bacillus subtilisComQ32063207Hypothetical protein yuzC [ BacillusUniRef100_O32089Bacillus subtilisYuzCsubtilis ]3208Hypothetical protein yuxH [ BacillusUniRef100_P14203Bacillus subtilisYuxHsubtilis ]3209YueK protein [ Bacillus subtilis ]UniRef100_O32090Bacillus subtilisYueK3210YueJ protein [ Bacillus subtilis ]UniRef100_O32091Bacillus subtilisYueJ3211YueI32123213Hypothetical protein yueG [ BacillusUniRef100_O32094Bacillus subtilissubtilis ]3214YueF3215RRF2 family protein [ Bacillus cereus ]UniRef100_Q81EX1Bacillus cereusYwnA3216Probable lipase/esteraseUniRef100_Q7UUA2RhodopirellulaYuxL[ Rhodopirellula baltica ]baltica3217BH1896 protein [ Bacillus halodurans ]UniRef100_Q9KBN0Bacillus halodurans3218YueE protein [ Bacillus subtilis ]UniRef100_O32098Bacillus subtilisYueE3219YueD protein [ Bacillus subtilis ]UniRef100_O32099Bacillus subtilisYueD3220Hypothetical protein yueC [ BacillusUniRef100_O32100Bacillus subtilisYueCsubtilis ]3221YueB protein [ Bacillus subtilis ]UniRef100_O32101Bacillus subtilisYueB3222YukA protein [ Bacillus subtilis ]UniRef100_P71068Bacillus subtilisYukA3223YukC protein [ Bacillus subtilis ]UniRef100_P71070Bacillus subtilisYukC3224YukD protein [ Bacillus subtilis ]UniRef100_P71071Bacillus subtilis3225Lin0049 protein [ Listeria innocua ]UniRef100_Q92FQ4Listeria innocua3226YflA3227YukF protein [ Bacillus subtilis ]UniRef100_P71073Bacillus subtilisYukF3228Alanine dehydrogenase [ BacillusUniRef100_Q08352Bacillus subtilisAldsubtilis ]32293230YuiH protein [ Bacillus subtilis ]UniRef100_O32103Bacillus subtilisYuiH3231YuiG protein [ Bacillus subtilis ]UniRef100_O32104Bacillus subtilisYuiG3232YuiF protein [ Bacillus subtilis ]UniRef100_O32105Bacillus subtilisYuiF3233Probable cytosol aminopeptidaseUniRef100_O32106Bacillus subtilisYuiE[ Bacillus subtilis ]3234YuiD protein [ Bacillus subtilis ]UniRef100_O32107Bacillus subtilisYuiD3235YuiC protein [ Bacillus subtilis ]UniRef100_O32108Bacillus subtilisYuiC3236YuiB protein [ Bacillus subtilis ]UniRef100_O32109Bacillus subtilisYuiB32373238YumB3239Thioredoxine reductase [ BacillusUniRef100_O05268Bacillus subtilisYumCsubtilis ]32403241YdjO protein [ Bacillus subtilis ]UniRef100_O34759Bacillus subtilis3242YxbD3243Hypothetical protein yutM [ BacillusUniRef100_O32113Bacillus subtilisYutMsubtilis ]3244Diaminopimelate epimerase [ BacillusUniRef100_O32114Bacillus subtilisDapFsubtilis ]3245YutK protein [ Bacillus subtilis ]UniRef100_O32115Bacillus subtilisYutK3246YuzB protein [ Bacillus subtilis ]UniRef100_O32116Bacillus subtilis3247YutJ protein [ Bacillus subtilis ]UniRef100_O32117Bacillus subtilisYutJ3248YdhG protein [ Bacillus subtilis ]UniRef100_O05499Bacillus subtilisYdhG3249Response regulator aspartateUniRef100_Q9KBE1BacillusRapIphosphatase [ Bacillus halodurans ]halodurans3250Phenolic acid decarboxylase [ BacillusUniRef100_O07006Bacillus subtilisPadCsubtilis ]3251BH2266 protein [ Bacillus halodurans ]UniRef100_Q9KAM1Bacillus halodurans3252YuzD protein [ Bacillus subtilis ]UniRef100_O32118Bacillus subtilisYuzD3253YutI protein [ Bacillus subtilis ]UniRef100_O32119Bacillus subtilis3254Probable peptidase yuxL [ BacillusUniRef100_P39839Bacillus subtilisYuxLsubtilis ]3255Homoserine kinase [ Bacillus subtilis ]UniRef100_P04948Bacillus subtilisThrB3256Threonine synthase [ Bacillus subtilis ]UniRef100_P04990Bacillus subtilisThrC3257Homoserine dehydrogenase [ BacillusUniRef100_P19582Bacillus subtilisHomsubtilis ]3258Glycerate dehydrogenaseUniRef100_Q8ENW9OceanobacillusYvcT[ Oceanobacillus iheyensis ]iheyensis3259YutH protein [ Bacillus subtilis ]UniRef100_O32123Bacillus subtilisYutH3260Hypothetical protein yutG [ BacillusUniRef100_O32124Bacillus subtilisYutGsubtilis ]3261YutF protein [ Bacillus subtilis ]UniRef100_O32125Bacillus subtilisYutF3262YutE protein [ Bacillus subtilis ]UniRef100_O32126Bacillus subtilisYutE3263YutD protein [ Bacillus subtilis ]UniRef100_O32127Bacillus subtilis3264YutC protein [ Bacillus subtilis ]UniRef100_O32128Bacillus subtilisYutC3265LipA3266YunA protein [ Bacillus subtilis ]UniRef100_O32130Bacillus subtilisYunA32673268Sodium-dependent transporterUniRef100_Q9K7C5BacillusYocR[ Bacillus halodurans ]halodurans3269YunB protein [ Bacillus subtilis ]UniRef100_O32131Bacillus subtilisYunB3270YunC protein [ Bacillus subtilis ]UniRef100_O32132Bacillus subtilisYunC3271YunD protein [ Bacillus subtilis ]UniRef100_O32133Bacillus subtilisYunD3272YunE protein [ Bacillus subtilis ]UniRef100_O32134Bacillus subtilisYunE3273YunF protein [ Bacillus subtilis ]UniRef100_O32135Bacillus subtilisYunF3274YmcC3275TetR family transcriptional regulator?UniRef100_Q67KA4SymbiobacteriumPksA[ Symbiobacterium thermophilum ]thermophilum32763277Purine catabolism protein pucGUniRef100_O32148Bacillus subtilisYurG[ Bacillus subtilis ]3278Allantoate amidohydrolase [ BacillusUniRef100_O32149Bacillus subtilisYurHsubtilis ]3279Purine catabolism regulatory proteinUniRef100_O32138Bacillus subtilisPucR[ Bacillus subtilis ]3280Multidrug resistance protein B [ BacillusUniRef100_Q63FH7Bacillus cereusBltcereus ZK]ZK3281BH2308 protein [ Bacillus halodurans ]UniRef100_Q9KAH9BacillusYcgAhalodurans3282TrpD3283Anthranilate phosphoribosyltransferaseUniRef100_Q8U089Pyrococcus furiosus[ Pyrococcus furiosus ]3284Extracellular ribonuclease precursorUniRef100_O32150Bacillus subtilisYurI[ Bacillus subtilis ]3285BH1977 protein [ Bacillus halodurans ]UniRef100_Q9KBF1Bacillus halodurans3286YurR3287Putative membrane protein [ BordetellaUniRef100_Q7WGW7Bordetella bronchisepticabronchiseptica ]3288UPI00003CB453 UniRef100 entryUniRef100_UPI00003CB4533289Response regulator aspartateUniRef100_P96649Bacillus subtilisRapIphosphatase I [ Bacillus subtilis ]3290YurU protein [ Bacillus subtilis ]UniRef100_O32162Bacillus subtilisYurU3291NifU-like protein [ Bacillus subtilis ]UniRef100_O32163Bacillus subtilisYurV3292Probable cysteine desulfurase [ BacillusUniRef100_O32164Bacillus subtilisCsdsubtilis ]3293YurX protein [ Bacillus subtilis ]UniRef100_O32165Bacillus subtilisYurX3294Vegetative protein 296 [ BacillusUniRef100_P80866Bacillus subtilisYurYsubtilis ]3295Lmo2575 protein [ ListeriaUniRef100_Q8Y480ListeriaCzcDmonocytogenes ]monocytogenes32963297BH3473 protein [ Bacillus halodurans ]UniRef100_Q9K796BacillusYurZhalodurans3298YusA protein [ Bacillus subtilis ]UniRef100_O32167Bacillus subtilisYusA3299YusB protein [ Bacillus subtilis ]UniRef100_O32168Bacillus subtilisYusB3300YusC protein [ Bacillus subtilis ]UniRef100_O32169Bacillus subtilisYusC3301Hypothetical protein yusD [ BacillusUniRef100_O32170Bacillus subtilisYusDsubtilis ]3302YusE protein [ Bacillus subtilis ]UniRef100_O32171Bacillus subtilis3303YusF protein [ Bacillus subtilis ]UniRef100_O32172Bacillus subtilisYusF33043305Glycine cleavage system H proteinUniRef100_O32174Bacillus subtilisGcvH[ Bacillus subtilis ]3306Hypothetical protein yusI [ BacillusUniRef100_O32175Bacillus subtilisYusIsubtilis ]3307YusJ protein [ Bacillus subtilis ]UniRef100_O32176Bacillus subtilisYusJ3308YusK protein [ Bacillus subtilis ]UniRef100_O32177Bacillus subtilisYusK3309YusL protein [ Bacillus subtilis ]UniRef100_O32178Bacillus subtilisYusL331033113312YusN protein [ Bacillus subtilis ]UniRef100_O32180Bacillus subtilisYusN3313Hypothetical protein yusU [ BacillusUniRef100_O32187Bacillus subtilissubtilis ]3314BH1040 protein [ Bacillus halodurans ]UniRef100_Q9KE18Bacillus halodurans3315YusV protein [ Bacillus subtilis ]UniRef100_O32188Bacillus subtilisYusV3316YfhA3317YfiZ protein [ Bacillus subtilis ]UniRef100_O31568Bacillus subtilisYfiZ3318YfiY protein [ Bacillus subtilis ]UniRef100_O31567Bacillus subtilisYfiY3319Hypothetical protein yusW precursorUniRef100_O32189Bacillus subtilisYusW[ Bacillus subtilis ]3320YusX protein [ Bacillus subtilis ]UniRef100_O32190Bacillus subtilisYusX3321D-alanyl-D-alanine carboxypeptidaseUniRef100_Q8ERG0OceanobacillusDacB[ Oceanobacillus iheyensis ]iheyensis3322Hypothetical oxidoreductase yusZUniRef100_P37959Bacillus subtilisYusZ[ Bacillus subtilis ]3323Metalloregulation DNA-binding stressUniRef100_P37960Bacillus subtilisMrgAprotein [ Bacillus subtilis ]3324Probable serine protease yvtA [ BacillusUniRef100_Q9R9I1Bacillus subtilisYvtAsubtilis ]3325Transcriptional regulatory protein cssRUniRef100_O32192Bacillus subtilisCssR[ Bacillus subtilis ]3326Sensor protein cssS [ Bacillus subtilis ]UniRef100_O32193Bacillus subtilisCssS3327YirB [ Bacillus subtilis ]UniRef100_O32302Bacillus subtilis3328Putative HTH-type transcriptionalUniRef100_P40950Bacillus subtilisYuxNregulator yuxN [ Bacillus subtilis ]3329Fumarate hydratase class II [ BacillusUniRef100_P07343Bacillus subtilisCitGsubtilis ]33303331Spore germination protein A1 [ BacillusUniRef100_P07868Bacillus subtilisGerAAsubtilis ]3332Spore germination protein A2 [ BacillusUniRef100_P07869Bacillus subtilisGerABsubtilis ]3333Spore germination protein A3 precursorUniRef100_P07870Bacillus subtilisGerAC[ Bacillus subtilis ]33343335YvqC3336YvqE protein [ Bacillus subtilis ]UniRef100_O32198Bacillus subtilisYvqE3337YvqF protein [ Bacillus subtilis ]UniRef100_O32199Bacillus subtilisYvqF3338YvqG protein [ Bacillus subtilis ]UniRef100_O32200Bacillus subtilisYvqG3339Hypothetical protein yvqH [ BacillusUniRef100_O32201Bacillus subtilisYvqHsubtilis ]3340Hypothetical protein yvqI [ BacillusUniRef100_O32202Bacillus subtilisYvqIsubtilis ]3341Pectate lyase P358 [ Bacillus sp. P-358]UniRef100_Q8RR73Bacillus sp. P-3583342YvqK protein [ Bacillus subtilis ]UniRef100_O34899Bacillus subtilisYvqK3343UPI00002E3648 UniRef100 entryUniRef100_UPI00002E3648FabG33443345GbsB3346DapA3347Putative metal binding protein, YvrAUniRef100_O34631Bacillus subtilisYvrA[ Bacillus subtilis ]3348Putative hemin permease, YvrBUniRef100_O34451Bacillus subtilisYvrB[ Bacillus subtilis ]3349Putative metal binding protein, YvrCUniRef100_O34805Bacillus subtilisYvrC[ Bacillus subtilis ]3350Transcriptional regulator, GntR familyUniRef100_O815A7BacillusYdhC[ Bacillus anthracis ]anthracis3351Putative ketoreductase, YvrD [ BacillusUniRef100_O34782Bacillus subtilisYvrDsubtilis ]3352UPI00003CC410 UniRef100 entryUniRef100_UPI00003CC410YflK3353Transcriptional regulators, LysR familyUniRef100_Q81DJ6Bacillus cereusAlsR[ Bacillus cereus ]3354Exo-poly-alpha-D-galacturonosidase,UniRef100_Q9WYR8Thermotoga maritimaputative [ Thermotoga maritima ]3355Altronate hydrolase [ Bacillus subtilis ]UniRef100_O34673Bacillus subtilisUxaA3356Altronate oxidoreductase [ BacillusUniRef100_O34354Bacillus subtilisUxaBsubtilis ]3357Lacl repressor-like protein [ BacillusUniRef100_Q9JMQ1Bacillus subtilisExuRsubtilis ]3358Hypothetical symporter yjmB [ BacillusUniRef100_O34961Bacillus subtilisYjmBsubtilis ]3359Uronate isomerase [ Bacillus subtilis ]UniRef100_O34808Bacillus subtilisUxaC3360Putative sensory protein kinase, YvrGUniRef100_O34989Bacillus subtilisYvrG[ Bacillus subtilis ]3361Putative DNA binding responseUniRef100_P94504Bacillus subtilisYvrHregulator, YvrH [ Bacillus subtilis ]3362Ferrichrome transport ATP-bindingUniRef100_P49938Bacillus subtilisFhuCprotein fhuC [ Bacillus subtilis ]3363Ferrichrome transport systemUniRef100_P49937Bacillus subtilisFhuGpermease protein fhuG [ Bacillussubtilis ]3364Ferrichrome transport systemUniRef100_P49936Bacillus subtilisFhuBpermease protein fhuB [ Bacillussubtilis ]3365Putative arginine ornithine antiporter,UniRef100_O32204Bacillus subtilisYvsHYvsH [ Bacillus subtilis ]3366Hypothetical protein yvsG precursorUniRef100_O32205Bacillus subtilisYvsG[ Bacillus subtilis ]3367Putative molybdate binding protein,UniRef100_O32206Bacillus subtilisYvgJYvgJ [ Bacillus subtilis ]3368YcnB3369Putative reductase protein, YvgNUniRef100_O32210Bacillus subtilisYvgN[ Bacillus subtilis ]3370Fructokinase [ Listeria monocytogenes ]UniRef100_Q722A5ListeriaYdhRmonocytogenes3371Hypothetical protein ycbU precursorUniRef100_P42253Bacillus subtilisYcbU[ Bacillus subtilis ]3372Hypothetical protein CPE0889UniRef100_Q8XM01Clostridium perfringens[ Clostridium perfringens ]3373YvgS protein [ Bacillus subtilis ]UniRef100_O32215Bacillus subtilisYvgS3374Hypothetical UPF0126 protein yvgTUniRef100_O32216Bacillus subtilisYvgT[ Bacillus subtilis ]3375Glutamate-rich protein grpB [ BacillusUniRef100_Q81CT5Bacillus cereusYqkAcereus ]3376Acetyltransferase, GNAT familyUniRef100_Q6HJN8BacillusYuaI[ Bacillus thuringiensis ]thuringiensis3377Disulfide bond formation protein CUniRef100_O32217Bacillus subtilisBdbC[ Bacillus subtilis ]3378Disulfide bond formation protein DUniRef100_O32218Bacillus subtilisBdbDprecursor [ Bacillus subtilis ]3379YvgW protein [ Bacillus subtilis ]UniRef100_O32219Bacillus subtilisYvgW3380ABC transporter, substrate bindingUniRef100_Q8U7T8AgrobacteriumYvfKprotein [ Agrobacterium tumefaciens ]tumefaciens3381Putative sugar transport integralUniRef100_Q9K442StreptomycesYurNmembrane protein [ Streptomycescoelicolorcoelicolor ]3382Putative sugar transport integralUniRef100_Q9K441StreptomycesYurMmembrane protein [ Streptomycescoelicolorcoelicolor ]3383Alpha-glucosidase [ ClostridiumUniRef100_Q97K36Clostridium acetobutylicumacetobutylicum ]3384Glucan-glucohydrolase [ MicrobisporaUniRef100_Q59506MicrobisporaYbbDbispora ]bispora3385ABC transporter, ATP-binding proteinUniRef100_Q81NK1BacillusMntB[ Bacillus anthracis ]anthracis3386ABC transporter, permease proteinUniRef100_Q81NK2BacillusMntD[ Bacillus anthracis ]anthracis3387ABC transporter, manganese-bindingUniRef100_Q71YG9ListeriaYcdHprotein [ Listeria monocytogenes ]monocytogenes3388Hypothetical protein [ Bacillus cereus ]UniRef100_Q74NQ1Bacillus cereusYhjQ3389Phosphosugar-binding transcriptionalUniRef100_Q837Y3EnterococcusYfiAregulator, RpiR family, putativefaecalis[ Enterococcus faecalis ]33901-phosphofructokinase [ EnterococcusUniRef100_Q837Y2EnterococcusFruKfaecalis ]faecalis3391PTS system, fructose-specific family,UniRef100_Q837Y1EnterococcusFruAIIBC components [ Enterococcusfaecalisfaecalis ]3392PTS system, IIA componentUniRef100_Q837Y0EnterococcusFruA[ Enterococcus faecalis ]faecalis3393Fructoseltagatose bisphosphateUniRef100_Q7MC78Vibrio vulnificusFbaAaldolase [ Vibrio vulnificus ]33943395Heavy metal-transporting ATPaseUniRef100_Q6HF81BacillusYvgX[ Bacillus thuringiensis ]thuringiensis3396Copper chaperone copZ [ BacillusUniRef100_O32221Bacillus subtilissubtilis ]3397YvgZ protein [ Bacillus subtilis ]UniRef100_O32222Bacillus subtilisYvgZ3398Intracellular proteinase [ ThermoplasmaUniRef100_Q97BN0ThermoplasmaYraAvolcanium ]volcanium3399Putative HTH-type transcriptionalUniRef100_O05261Bacillus subtilisYulBregulator yulB [ Bacillus subtilis ]3400Rhamnulose kinase/L-fuculose kinaseUniRef100_Q8A1A3BacteroidesYulC[ Bacteroides thetaiotaomicron ]thetaiotaomicron3401Putative sugar isomeraseUniRef100_Q9XAB3Streptomyces coelicolor[ Streptomyces coelicolor ]3402Hypothetical protein [ PolyangiumUniRef100_Q9L8B7Polyangium cellulosumcellulosum ]3403Hypothetical oxidoreductase yuxGUniRef100_P40747Bacillus subtilisYuxG[ Bacillus subtilis ]3404YfhI protein [ Bacillus subtilis ]UniRef100_O31577Bacillus subtilisYfhI3405YvmA [ Bacillus subtilis ]UniRef100_O34307Bacillus subtilisYvmA3406YvmC [ Bacillus subtilis ]UniRef100_O34351Bacillus subtilisYvmC3407Putative cytochrome P450 CYPXUniRef100_O34926Bacillus subtilisCypX[ Bacillus subtilis ]3408Hypothetical protein [ ChromobacteriumUniRef100_Q7NRR6Chromobacterium violaceumviolaceum ]3409YvnA3410Hypothetical protein BRA0099UniRef100_Q8FXH8Brucella suis[ Brucella suis ]3411Chloroplast Toc64-2 [ PhyscomitrellaUniRef100_Q6RJN6PhyscomitrellaGatApatens ]patens3412Hypothetical oxidoreductase yvaAUniRef100_O32223Bacillus subtilisYvaA[ Bacillus subtilis ]3413Putative acyl carrier proteinUniRef100_O32224Bacillus subtilisYvaBphosphodiesterase 2 [ Bacillus subtilis ]3414Hypothetical UPF0176 protein ybfQUniRef100_O31457Bacillus subtilisYbfQ[ Bacillus subtilis ]3415Putative DNA binding responseUniRef100_P94504Bacillus subtilisregulator, YvrH [ Bacillus subtilis ]3416YvrI protein [ Bacillus subtilis ]UniRef100_O34843Bacillus subtilisYvrI34173418Oxalate decarboxylase oxdC [ BacillusUniRef100_O34714Bacillus subtilisOxdCsubtilis ]3419Hypothetical protein yvrL [ BacillusUniRef100_O34686Bacillus subtilisYvrLsubtilis ]3420BH3120 protein [ Bacillus halodurans ]UniRef100_Q9K886Bacillus halodurans34213422Group-specific protein [ Bacillus cereusUniRef100_Q633V1Bacillus cereus ZKZK]3423342434253426UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0693427IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012 ]3428LexA repressor [ ListeriaUniRef100_Q720B9Listeria monocytogenesmonocytogenes ]3429Hypothetical protein [ Bacillus cereusUniRef100_Q630E5Bacillus cereus ZKZK]3430Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81XX1Bacillus anthracis34313432Hypothetical protein RSc1705UniRef100_Q8XYQ3Ralstonia solanacearum[ Ralstonia solanacearum ]3433YxiD3434Hypothetical protein [ BacillusUniRef100_Q6HH72Bacillus thuringiensisthuringiensis ]3435BlyA3436343734383439YomQ protein [Bacteriophage SPBc2]UniRef100_O64053BacteriophageYomQSPBc23440XkdV344134423443YubE3444ORF38 [Bacteriophage phi-105]UniRef100_Q9ZXE5Bacteriophage phi-1053445YqbO3446Hypothetical protein MW1895UniRef100_Q8NVQ7Staphylococcus aureus[ Staphylococcus aureus ]344734483449Prophage LambdaBa02, major tailUniRef100_Q81W97Bacillus anthracisprotein, putative [ Bacillus anthracis ]34503451ORF32 [Bacteriophage phi-105]UniRef100_Q9ZXF1Bacteriophage phi-10534523453Gp7 protein [Bacteriophage phi3626]UniRef100_Q8SBP7Bacteriophage phi36263454ORF29 [Bacteriophage phi-105]UniRef100_Q9ZXF4Bacteriophage phi-1053455ORF27 [Bacteriophage phi-105]UniRef100_Q9ZXF6Bacteriophage phi-1053456ClpP family serine protease, possibleUniRef100_Q97HW4ClostridiumClpPphage related [ Clostridiumacetobutylicumacetobutylicum ]3457ORF25 [Bacteriophage phi-105]UniRef100_Q9ZXF8Bacteriophage phi-10534583459Putative terminase large subunitUniRef100_Q8SBQ2Bacteriophage phi3626[Bacteriophage phi3626]3460Phage terminase-like protein, smallUniRef100_Q97HW1Clostridium acetobutylicumsubunit [ Clostridium acetobutylicum ]3461Prophage LambdaBa02, HNHUniRef100_Q81W86Bacillus anthracisendonuclease family protein [ Bacillusanthracis ]3462Spore coat protein D [ Bacillus subtilis ]UniRef100_P07791Bacillus subtilis3463ORF16 [Bacteriophage phi-105]UniRef100_Q9ZXB9Bacteriophage phi-105346434653466ORF14 [Bacteriophage phi-105]UniRef100_Q9ZXC1Bacteriophage phi-1053467ORF13 [Bacteriophage phi-105]UniRef100_Q9ZXC2Bacteriophage phi-1053468ORF12 [Bacteriophage phi-105]UniRef100_Q9ZXC3Bacteriophage phi-10534693470ORF11 [Bacteriophage phi-105]UniRef100_Q9ZXC4Bacteriophage phi-1053471ORF10 [Bacteriophage phi-105]UniRef100_Q9ZXC5Bacteriophage phi-1053472DNA, complete sequenceUniRef100_Q9ZXC7Bacteriophage phi-105[Bacteriophage phi-105]3473DNA, complete sequenceUniRef100_Q9ZXC8Bacteriophage phi-105[Bacteriophage phi-105]3474347534763477Orf 36 [ Staphylococcus aureusUniRef100_Q9T1Z5Staphylococcus aureusbacteriophage PVL]bacteriophage PVL34783479Orf16 [Bacteriophage bIL312]UniRef100_Q9AZE4Bacteriophage bIL3123480Gp26 protein [Bacteriophage phi3626]UniRef100_Q8SBM8Bacteriophage phi36263481Cl like protein [ Lactobacillus caseiUniRef100_O64370Lactobacillus caseibacteriophage A2]bacteriophage A23482Int gene product [ StaphylococcusUniRef100_Q932E5StaphylococcusYdcLaureus ]aureus3483SsrA-binding protein [ Bacillus subtilis ]UniRef100_O32230Bacillus subtilisSmpB3484Ribonuclease R [ Bacillus subtilis ]UniRef100_O32231Bacillus subtilisRnr3485YvaK protein [ Bacillus subtilis ]UniRef100_O32232Bacillus subtilisYvaK3486348734883489YvaO3490YvaO3491Glycine betaine/carnitine/cholineUniRef100_O34742Bacillus subtilisOpuCDtransport system permease proteinopuCD [ Bacillus subtilis ]3492Glycine betaine/carnitine/choline-UniRef100_O32243Bacillus subtilisOpuCCbinding protein precursor [ Bacillussubtilis ]3493Glycine betaine/carnitine/cholineUniRef100_O34878Bacillus subtilisOpuCBtransport system permease proteinopuCB [ Bacillus subtilis ]3494Glycine betaine/carnitine/cholineUniRef100_O34992Bacillus subtilisOpuCAtransport ATP-binding protein opuCA[ Bacillus subtilis ]3495ORF-1 [ Bacillus subtilis ]UniRef100_O34709Bacillus subtilisYvaV3496YvbG3497YvbI3498YvbJ protein [ Bacillus subtilis ]UniRef100_O32247Bacillus subtilisYvbJ3499UPI00003CBDCC UniRef100 entryUniRef100_UPI00003CBDCCYfiY35003501YoaZ [ Bacillus subtilis ]UniRef100_O34947Bacillus subtilisYoaZ3502Enolase [ Bacillus subtilis ]UniRef100_P37869Bacillus subtilisEno35032,3-bisphosphoglycerate-independentUniRef100_P39773Bacillus subtilisPgmphosphoglycerate mutase [ Bacillussubtilis ]3504Triosephosphate isomerase [ BacillusUniRef100_P27876Bacillus subtilisTpiAsubtilis ]3505Phosphoglycerate kinase [ BacillusUniRef100_P40924Bacillus subtilisPgksubtilis ]3506Glyceraldehyde-3-phosphateUniRef100_P09124Bacillus subtilisGapAdehydrogenase 1 [ Bacillus subtilis ]3507Central glycolytic genes regulatorUniRef100_O32253Bacillus subtilisCggR[ Bacillus subtilis ]3508Hypothetical protein yvbT [ BacillusUniRef100_O32254Bacillus subtilisYvbTsubtilis ]3509YvbW protein [ Bacillus subtilis ]UniRef100_O32257Bacillus subtilisYvbW35103511ABC-type multidrug transport system,UniRef100_Q8R7K3ThermoanaerobacterYfiLATPase componenttengcongensis[ Thermoanaerobacter tengcongensis ]35123513YvbY protein [ Bacillus subtilis ]UniRef100_O32259Bacillus subtilisYvbY3514YvfW protein [ Bacillus subtilis ]UniRef100_O07021Bacillus subtilisYvfW3515YvfV3516Hypothetical protein yvfI [ BacillusUniRef100_O07007Bacillus subtilisYvfIsubtilis ]3517Putative L-lactate permease yvfHUniRef100_P71067Bacillus subtilisYvfH[ Bacillus subtilis ]3518RNA polymerase sigma-54 factorUniRef100_P24219Bacillus subtilisSigL[ Bacillus subtilis ]3519Hypothetical protein yvfG [ BacillusUniRef100_P71066Bacillus subtilissubtilis ]3520Hypothetical protein yvfF [ BacillusUniRef100_P71065Bacillus subtilisYvfFsubtilis ]3521YvfE protein [ Bacillus subtilis ]UniRef100_Q795J3Bacillus subtilisYvfE3522Hypothetical protein yvfD [ BacillusUniRef100_P71063Bacillus subtilisYvfDsubtilis ]3523Hypothetical protein yvfC [ BacillusUniRef100_P71062Bacillus subtilisYvfCsubtilis ]3524YvfB3525YvfA3526Hypothetical protein yveT [ BacillusUniRef100_P71059Bacillus subtilisYveTsubtilis ]3527Hypothetical protein yveS [ BacillusUniRef100_P71058Bacillus subtilisYveSsubtilis ]3528Hypothetical protein yveR [ BacillusUniRef100_P71057Bacillus subtilisYveRsubtilis ]3529Hypothetical protein yveQ [ BacillusUniRef100_P71056Bacillus subtilisYveQsubtilis ]3530Hypothetical protein yveP [ BacillusUniRef100_P71055Bacillus subtilisYvePsubtilis ]3531Hypothetical protein yveO [ BacillusUniRef100_P71054Bacillus subtilisYveOsubtilis ]3532Hypothetical protein yveN [ BacillusUniRef100_P71053Bacillus subtilisYveNsubtilis ]3533Hypothetical protein yveM [ BacillusUniRef100_P71052Bacillus subtilisYveMsubtilis ]3534YveL3535Chain length determinant proteinUniRef100_Q72XH7Bacillus cereusYveK[ Bacillus cereus ]3536Hypothetical protein yveJ [ BacillusUniRef100_P71049Bacillus subtilisSlrsubtilis ]3537General stress protein 14 [ BacillusUniRef100_P80871Bacillus subtilisYwrOsubtilis ]3538YcbE3539UPI000027D43B UniRef100 entryUniRef100_UPI000027D43BYvcT35404-hydroxythreonine-4-phosphateUniRef100_Q8CUU4Oceanobacillus iheyensisdehydrogenase (EC 1.1.1.262) (4-(phosphohydroxy)-L-threoninedehydrogenase) [ Oceanobacillusiheyensis ]3541Hypothetical conserved proteinUniRef100_Q8CUU5Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]3542GbsB3543DapA3544Transcriptional regulatorUniRef100_Q8CUU7OceanobacillusRocR[ Oceanobacillus iheyensis ]iheyensis3545Hypothetical protein [ BdellovibrioUniRef100_Q6MH73Bdellovibrio bacteriovorusbacteriovorus ]3546NADH-dependent flavin oxidoreductaseUniRef100_Q8ELB6OceanobacillusYqiG[ Oceanobacillus iheyensis ]iheyensis3547Levansucrase precursor [ BacillusUniRef100_P05655Bacillus subtilisSacBsubtilis ]3548Hypothetical protein yveB [ BacillusUniRef100_O07003Bacillus subtilisYveBsubtilis ]3549Hypothetical protein [ PseudomonasUniRef100_Q9I5B4Pseudomonas aeruginosaaeruginosa ]3550ATP-dependent Clp proteaseUniRef100_P80244Bacillus subtilisClpPproteolytic subunit [ Bacillus subtilis ]3551Hypothetical protein yvdD [ BacillusUniRef100_O06986Bacillus subtilisYvdDsubtilis ]35523553Possible metal-dependentUniRef100_Q6HM73BacillusYdhJphosphohydrolase; possible oxetanocinthuringiensisA resistance protein [ Bacillusthuringiensis ]3554Hypothetical protein yvdB [ BacillusUniRef100_O06984Bacillus subtilisYvdBsubtilis ]3555Hypothetical protein yvdA [ BacillusUniRef100_O06983Bacillus subtilisYvdAsubtilis ]3556Probable 2-ketogluconate reductaseUniRef100_O32264Bacillus subtilisYvcT[ Bacillus subtilis ]3557BH0392 protein [ Bacillus halodurans ]UniRef100_Q9KFT5BacillusYdfEhalodurans3558BH0391 protein [ Bacillus halodurans ]UniRef100_Q9KFT6BacillusYdfFhalodurans3559Ribonuclease [ Paenibacillus polymyxa ]UniRef100_Q7M0X3Paenibacillus polymyxa3560Barstar [ Bacillus amyloliquefaciens ]UniRef100_P11540Bacillus amyloliquefaciens3561Hypothetical protein yvcN [ BacillusUniRef100_O06977Bacillus subtilisYvcNsubtilis ]3562HPr-like protein crh [ Bacillus subtilis ]UniRef100_O06976Bacillus subtilis3563Hypothetical protein yvcL [ BacillusUniRef100_O06975Bacillus subtilisYvcLsubtilis ]3564Hypothetical UPF0052 protein yvcKUniRef100_O06974Bacillus subtilisYvcK[ Bacillus subtilis ]3565Hypothetical UPF0042 protein yvcJUniRef100_O06973Bacillus subtilisYvcJ[ Bacillus subtilis ]3566Hypothetical protein yvcI [ BacillusUniRef100_O06972Bacillus subtilisYvcIsubtilis ]3567Thioredoxin reductase [ Bacillus subtilis ]UniRef100_P80880Bacillus subtilisTrxB3568Hypothetical protein yvcD [ BacillusUniRef100_O06968Bacillus subtilisYvcDsubtilis ]3569Hypothetical conserved proteinUniRef100_Q8ETL1OceanobacillusYbbJ[ Oceanobacillus iheyensis ]iheyensis3570Histidine biosynthesis bifunctionalUniRef100_O34912Includes:HisIprotein hisIE [Includes:Phosphoribosyl-Phosphoribosyl-AMP cyclohydrolaseAMP(EC 3.5.4.19) (PRA-CH);cyclohydrolasePhosphoribosyl-ATP pyrophosphatase(EC 3.5.4.19)(EC 3.6.1.31) (PRA-PH)] [ Bacillus(PRA-CH);subtilis ]Phosphoribosyl-ATPpyrophosphatase(EC 3.6.1.31)(PRA-PH)3571Imidazole glycerol phosphate synthaseUniRef100_O34727Bacillus subtilisHisFsubunit hisF [ Bacillus subtilis ]35721-(5-phosphoribosyl)-5-[(5-UniRef100_O35006(5-HisAphosphoribosylamino)methylideneamino]phosphoribosylamino)imidazole-4-carboxamide isomerasemethylideneamino[ Bacillus subtilis ]3573Imidazole glycerol phosphate synthaseUniRef100_O34565Bacillus subtilisHisHsubunit hisH [ Bacillus subtilis ]3574Imidazoleglycerol-phosphateUniRef100_O34683Bacillus subtilisHisBdehydratase [ Bacillus subtilis ]3575Histidinol dehydrogenase [ BacillusUniRef100_O34651Bacillus subtilisHisDsubtilis ]3576ATP phosphoribosyltransferaseUniRef100_O34520Bacillus subtilisHisG[ Bacillus subtilis ]3577HisZ3578YvpB [ Bacillus subtilis ]UniRef100_O34735Bacillus subtilisYvpB3579Pectate lyase Pel-28K [ Bacillus sp. P-UniRef100_Q8L0R5Bacillus sp. P-YvpA2850]28503580Putative acetyltransferase [ BacillusUniRef100_O34993Bacillus subtilisYvoFsubtilis ]3581Pyrophosphatase ppaX [ BacillusUniRef100_Q9JMQ2Bacillus subtilisHprPsubtilis ]3582YvoD [ Bacillus subtilis ]UniRef100_O34382Bacillus subtilisYvoD3583Prolipoprotein diacylglycerylUniRef100_O34752Bacillus subtilisLgttransferase [ Bacillus subtilis ]3584HPr kinase/phosphorylase (EC 2.7.1.—)UniRef100_O34483Bacillus subtilisHprK(EC 2.7.4.—) (HPrK/P) (HPr(Ser)kinase/phosphorylase) [ Bacillussubtilis ]3585YfiV protein [ Bacillus subtilis ]UniRef100_O31564Bacillus subtilisYfiV3586YfiU protein [ Bacillus subtilis ]UniRef100_O31563Bacillus subtilisYfiU3587YvnB [ Bacillus subtilis ]UniRef100_O34986Bacillus subtilisYvnB3588YvlD [ Bacillus subtilis ]UniRef100_O34648Bacillus subtilisYvlD3589YvlC [ Bacillus subtilis ]UniRef100_O34719Bacillus subtilis3590YvlB [ Bacillus subtilis ]UniRef100_O34628Bacillus subtilisYvlB3591Hypothetical protein yvlA [ BacillusUniRef100_O34322Bacillus subtilisYvlAsubtilis ]3592Hypothetical protein yvkN [ BacillusUniRef100_O34604Bacillus subtilissubtilis ]35933594UvrABC system protein A [ BacillusUniRef100_O34863Bacillus subtilisUvrAsubtilis ]3595UvrABC system protein B [ BacillusUniRef100_Q659H3BacillusUvrBamyloliquefaciens]amyloliquefaciens3596CsbA protein [ Bacillus subtilis ]UniRef100_P37953Bacillus subtilis35973598YvjD [ Bacillus subtilis ]UniRef100_O34375Bacillus subtilisYvjD3599YvzD3600Putative protease [ Bacillus subtilis ]UniRef100_O35002Bacillus subtilisYvjB3601Tartrate dehydrogenaseUniRef100_Q8ESH5OceanobacillusYcsA[ Oceanobacillus iheyensis ]iheyensis3602Cell wall-binding protein [ BacillusUniRef100_Q9K6X4BacillusYvcEhalodurans ]halodurans3603Cell division protein ftsX homologUniRef100_O34876Bacillus subtilisFtsX[ Bacillus subtilis ]3604Cell division ATP-binding proteinUniRef100_O34814Bacillus subtilisFtsE[ Bacillus subtilis ]3605Cytochrome c-551 [ Bacillus subtilis ]UniRef100_O34594Bacillus subtilisCccB3606YvjA [ Bacillus subtilis ]UniRef100_O34792Bacillus subtilisYvjA3607Peptide chain release factor 2 [ BacillusUniRef100_P28367Bacillus subtilisPrfBsubtilis ]3608Preprotein translocase secA subunitUniRef100_P28366Bacillus subtilisSecA[ Bacillus subtilis ]3609Hypothetical protein yvyD [ BacillusUniRef100_P28368Bacillus subtilisYvyDsubtilis ]36103611Flagellar protein fliT [ Bacillus subtilis ]UniRef100_P39740Bacillus subtilisFliT3612Flagellar protein fliS [ Bacillus subtilis ]UniRef100_P39739Bacillus subtilisFliS3613Flagellar hook-associated protein 2UniRef100_P39738Bacillus subtilisFliD[ Bacillus subtilis ]3614Hypothetical protein yvyC [ BacillusUniRef100_P39737Bacillus subtilisYvyCsubtilis ]3615Flagellin [ Bacillus subtilis ]UniRef100_P02968Bacillus subtilisHag3616Carbon storage regulator homologUniRef100_P33911Bacillus subtilis[ Bacillus subtilis ]3617Transmembrane protein [ BacillusUniRef100_P96503Bacillus subtilisYviFsubtilis ]3618YviE protein [ Bacillus subtilis ]UniRef100_P96502Bacillus subtilisYviE3619Flagellar hook-associated protein 3UniRef100_P96501Bacillus subtilisFlgL[ Bacillus subtilis ]3620Flagellar hook-associated protein 1UniRef100_P39810Bacillus subtilisFlgK[ Bacillus subtilis ]3621Hypothetical protein yvyG [ BacillusUniRef100_P39808Bacillus subtilisYvyGsubtilis ]3622Negative regulator of flagellin synthesisUniRef100_P39809Bacillus subtilis[ Bacillus subtilis ]3623Hypothetical protein yvyF [ BacillusUniRef100_P39807Bacillus subtilisYvyFsubtilis ]3624ComFC36253626ComFA3627DegV protein [ Bacillus subtilis ]UniRef100_P32436Bacillus subtilisYviA3628Transcriptional regulatory protein degUUniRef100_P13800Bacillus subtilisDegU[ Bacillus subtilis ]3629DegS3630Hypothetical UPF0029 protein yvyEUniRef100_P32437Bacillus subtilisYvyE[ Bacillus subtilis ]3631Putative transcriptional regulatorUniRef100_P96499Bacillus subtilisYvhJ[ Bacillus subtilis ]3632Hypothetical protein yunG [ BacillusUniRef100_Q63CU2Bacillus cereusYunGcereus ZK]ZK3633Probable undecaprenyl-phosphate N-UniRef100_O34753Bacillus subtilisTagOacetylglucosaminyl 1-phosphatetransferase [ Bacillus subtilis ]3634Putative teichuronic acid biosynthesisUniRef100_O32267Bacillus subtilisTuaHglycosyl transferase tuaH [ Bacillussubtilis ]3635Putative teichuronic acid biosynthesisUniRef100_O32268Bacillus subtilisTuaGglycosyl transferase tuaG [ Bacillussubtilis ]3636Teichuronic acid biosynthesis proteinUniRef100_O32269Bacillus subtilisTuaFtuaF [ Bacillus subtilis ]3637Teichuronic acid biosynthesis proteinUniRef100_O32270Bacillus subtilisTuaEtuaE (Bacillus subtilis]3638Putative UDP-glucose 4-epimeraseUniRef100_Q57664MethanococcusGalE[ Methanococcus jannaschii ]jannaschii3639UDP-glucose 6-dehydrogenaseUniRef100_O32271Bacillus subtilisTuaD[ Bacillus subtilis ]3640Putative teichuronic acid biosynthesisUniRef100_O32272Bacillus subtilisTuaCglycosyl transferase tuaC [ Bacillussubtilis ]3641Teichuronic acid biosynthesis proteinUniRef100_O32273Bacillus subtilisTuaBtuaB [ Bacillus subtilis ]3642UPI00003CB85E UniRef100 entryUniRef100_UPI00003CB85ETuaA3643LytC3644Amidase enhancer precursor [ BacillusUniRef100_Q02113Bacillus subtilisLytBsubtilis ]3645LytA3646Membrane-bound protein lytR [ BacillusUniRef100_Q02115Bacillus subtilisLytRsubtilis ]3647UDP-N-acetylglucosamine 2-UniRef100_P39131Bacillus subtilisYvyHepimerase [ Bacillus subtilis ]3648UTP--glucose-1-phosphateUniRef100_Q05852Bacillus subtilisGtaBuridylyltransferase [ Bacillus subtilis ]3649TagH3650Teichoic acid translocation permeaseUniRef100_P42953Bacillus subtilisTagGprotein tagG [ Bacillus subtilis ]3651Teichoic acid biosynthesis proteinUniRef100_Q9CH20LactococcusTagF[ Lactococcus lactis ]lactis3652CDP-glycerol: poly(glycerophosphate)UniRef100_P13485Bacillus subtilisTagFglycerophosphotransferase [ Bacillussubtilis ]3653TagD3654TagA3655Putative CDP-UniRef100_P27621Bacillus subtilisTagBglycerol: glycerophosphateglycerophosphotransferase [ Bacillussubtilis ]3656Beta-N-acetylglucosaminidaseUniRef100_P39848Bacillus subtilisLytDprecursor [ Bacillus subtilis ]3657Mannose-6-phosphate isomeraseUniRef100_P39841Bacillus subtilisPmi[ Bacillus subtilis ]36583659Anaerobic ribonucleoside-triphosphateUniRef100_Q733N6Bacillus cereusreductase, putative [ Bacillus cereus ]36602-keto-3-deoxygluconate permeaseUniRef100_P50847Bacillus subtilisKdgT[ Bacillus subtilis ]3661KHG/KDPG aldolase [Includes: 4-UniRef100_P50846Includes: 4-KdgAhydroxy-2-oxoglutarate aldolase (EChydroxy-2-4.1.3.16) (2-keto-4-hydroxyglutarateoxoglutaratealdolase) (KHG-aldolase); 2-dehydro-aldolase (EC3-deoxy-phosphogluconate aldolase4.1.3.16) (2-keto-(EC 4.1.2.14) (Phospho-2-dehydro-3-4-deoxygluconate aldolase) (Phospho-2-hydroxyglutarateketo-3-daldolase) (KHG-aldolase); 2-dehydro-3-deoxy-phosphogluconatealdolase (EC4.1.2.14)(Phospho-2-dehydro-3-deoxygluconatealdolase)(Phospho-2-keto-3-deoxygluconatealdol36622-dehydro-3-deoxygluconokinaseUniRef100_P50845Bacillus subtilisKdgK[ Bacillus subtilis ]3663HTH-type transcriptional regulatorUniRef100_P50844Bacillus subtilisKdgRkdgR [ Bacillus subtilis ]3664KduI36652-deoxy-D-gluconate 3-dehydrogenaseUniRef100_P50842Bacillus subtilisKduD[ Bacillus subtilis ]3666Alcohol dehydrogenase, glutathione-UniRef100_Q6HGX1BacillusAdhBdependent formaldehydethuringiensisdehydrogenase [ Bacillus thuringiensis ]3667YwtG protein [ Bacillus subtilis ]UniRef100_P96742Bacillus subtilisYwtG3668Hypothetical transcriptional regulatorUniRef100_Q7WY78Bacillus subtilisYwtFywtF [ Bacillus subtilis ]3669YwtE protein [ Bacillus subtilis ]UniRef100_P96741Bacillus subtilisYwtE3670Gamma-DL-glutamyl hydrolaseUniRef100_P96740Bacillus subtilisYwtDprecursor [ Bacillus subtilis ]36713672YwtB protein [ Bacillus subtilis ]UniRef100_P96738Bacillus subtilisYwtB3673YwtA protein [ Bacillus subtilis ]UniRef100_P96737Bacillus subtilisYwtA3674YwsC protein [ Bacillus subtilis ]UniRef100_P96736Bacillus subtilisYwsC3675RbsR3676Ribokinase [ Bacillus subtilis ]UniRef100_P36945Bacillus subtilisRbsK3677High affinity ribose transport proteinUniRef100_P36946Bacillus subtilisRbsDrbsD [ Bacillus subtilis ]3678Ribose transport ATP-binding proteinUniRef100_P36947Bacillus subtilisRbsArbsA [ Bacillus subtilis ]3679Ribose transport system permeaseUniRef100_P36948Bacillus subtilisRbsCprotein rbsC [ Bacillus subtilis ]3680D-ribose-binding protein precursorUniRef100_P36949Bacillus subtilisRbsB[ Bacillus subtilis ]3681Alpha-acetolactate decarboxylaseUniRef100_Q04777Bacillus subtilisAlsD[ Bacillus subtilis ]3682Acetolactate synthase [ Bacillus subtilis ]UniRef100_Q04789Bacillus subtilisAlsS3683HTH-type transcriptional regulator alsRUniRef100_Q04778Bacillus subtilisAlsR[ Bacillus subtilis ]3684YwrD protein [ Bacillus subtilis ]UniRef100_O05218Bacillus subtilisYwrD3685YwrC protein [ Bacillus subtilis ]UniRef100_O05217Bacillus subtilisYwrC3686YwrB protein [ Bacillus subtilis ]UniRef100_O05216Bacillus subtilisYwrB3687YwrA protein [ Bacillus subtilis ]UniRef100_O05215Bacillus subtilisYwrA3688Putative protein-tyrosine phosphataseUniRef100_P96717Bacillus subtilisYwqEywqE [ Bacillus subtilis ]3689Hypothetical protein ywqC [ BacillusUniRef100_P96715Bacillus subtilisYwqCsubtilis ]3690Hypothetical protein ywqB [ BacillusUniRef100_P96714Bacillus subtilisYwqBsubtilis ]3691YwqA protein [ Bacillus subtilis ]UniRef100_P94593Bacillus subtilisYwqA3692YwpJ protein [ Bacillus subtilis ]UniRef100_P94592Bacillus subtilisYwpJ3693YwpI protein [ Bacillus subtilis ]UniRef100_P94591Bacillus subtilisGlcR3694Fructose-6-phosphate aldolase 2UniRef100_P58424Escherichia coliYwjH[ Escherichia coli O157:H7]O157:H73695Hypothetical protein PM1968UniRef100_Q9CJM9PasteurellaFabG[ Pasteurella multocida ]multocida3696PTS system, sorbitol-specific IIAUniRef100_Q82YX6Enterococcus faecaliscomponent [ Enterococcus faecalis ]3697PTS system, sorbitol-specific IIBCUniRef100_Q82YX5Enterococcus faecaliscomponents [ Enterococcus faecalis ]3698UPI00002F4A3A UniRef100 entryUniRef100_UPI00002F4A3A3699Sorbitol operon activatorUniRef100_Q9X673Streptococcus mutans[ Streptococcus mutans ]3700Putative transcriptional regulator ofUniRef100_Q83PA8Shigella flexneriDeoRsorbose uptake and utilization genes[ Shigella flexneri ]3701YwpH protein [ Bacillus subtilis ]UniRef100_P94590Bacillus subtilisYwpH3702Hypothetical protein ywpG [ BacillusUniRef100_P94589Bacillus subtilisYwpGsubtilis ]3703YwpF protein [ Bacillus subtilis ]UniRef100_P94588Bacillus subtilisYwpF3704Large-conductance mechanosensitiveUniRef100_P94585Bacillus subtilisMscLchannel [ Bacillus subtilis ]3705(3R)-hydroxymyristoyl-[acyl carrierUniRef100_Q81JE0acyl carrierYwpBprotein] dehydratase (EC 4.2.1.—) ((3R)-proteinhydroxymyristoyl ACP dehydrase)[ Bacillus anthracis ]3706Flagellar hook-basal body complexUniRef100_P39753Bacillus subtilisFlhPprotein flhP [ Bacillus subtilis ]3707Flagellar hook-basal body complexUniRef100_P39752Bacillus subtilisFlhOprotein flhO [ Bacillus subtilis ]3708MreB-like protein [ Bacillus subtilis ]UniRef100_P39751Bacillus subtilisMbI3709Stage III sporulation protein D [ BacillusUniRef100_P15281Bacillus subtilissubtilis ]37103711Hypothetical protein ywoH [ BacillusUniRef100_P94578Bacillus subtilisYwoHsubtilis ]3712Hypothetical protein ywoG [ BacillusUniRef100_P94577Bacillus subtilisYwoGsubtilis ]3713Hypothetical protein ywoA [ BacillusUniRef100_P94571Bacillus subtilisYwoAsubtilis ]3714Manganese-dependent inorganicUniRef100_Q63AC7Bacillus cereusPpaCpyrophosphatase [ Bacillus cereus ZK]ZK3715Probable manganese catalaseUniRef100_P80878Bacillus subtilisYdbD[ Bacillus subtilis ]3716Hypothetical protein yqjF [ BacillusUniRef100_P54543Bacillus subtilisYqjFsubtilis ]3717BH2605 protein [ Bacillus halodurans ]UniRef100_Q9K9P0BacillusYhcVhalodurans3718Hypothetical protein yqxL [ BacillusUniRef100_P40948Bacillus subtilisYqxLsubtilis ]3719Hypothetical UPF0053 protein yqhBUniRef100_P54505Bacillus subtilisYqhB[ Bacillus subtilis ]3720Ammonium transporter nrgA [ BacillusUniRef100_Q07429Bacillus subtilisNrgAsubtilis ]3721Nitrogen regulatory PII-like proteinUniRef100_Q07428Bacillus subtilisNrgB[ Bacillus subtilis ]3722ATP-dependent Clp proteaseUniRef100_Q81CH1Bacillus cereusClpPproteolytic subunit [ Bacillus cereus ]3723RNA polymerase ECF-type sigmaUniRef100_Q63AF9Bacillus cereusSigMfactor [ Bacillus cereus ZK]ZK3724Hypothetical protein ywnI [ BacillusUniRef100_P71044Bacillus subtilisSpollQsubtilis ]3725Hypothetical protein ywnH [ BacillusUniRef100_P71043Bacillus subtilisYwnHsubtilis ]3726Hypothetical protein ywnF [ BacillusUniRef100_P71041Bacillus subtilisYwnFsubtilis ]3727Probable cardiolipin synthetase 2UniRef100_P71040Bacillus subtilisYwnE[ Bacillus subtilis ]3728UPI00003CB764 UniRef100 entryUniRef100_UPI00003CB764YhcA3729Antibiotic/siderophore biosynthesisUniRef100_Q81DP7Bacillus cereusprotein [ Bacillus cereus ]3730Probable serine activating enzymeUniRef100_P45745Bacillus subtilisDhbF[ Bacillus subtilis ]3731Isochorismatase [ Bacillus subtilis ]UniRef100_P45743Bacillus subtilisDhbB37322,3-dihydroxybenzoate-AMP ligaseUniRef100_P40871Bacillus subtilisDhbE[ Bacillus subtilis ]3733Isochorismate synthase dhbC [ BacillusUniRef100_P45744Bacillus subtilisDhbCsubtilis ]37342,3-dihydro-2,3-dihydroxybenzoateUniRef100_P39071Bacillus subtilisDhbAdehydrogenase [ Bacillus subtilis ]3735YuiI protein [ Bacillus subtilis ]UniRef100_O32102Bacillus subtilisYuiI3736Iron-uptake system permease proteinUniRef100_P40411Bacillus subtilisFeuCfeuC [ Bacillus subtilis ]3737Iron-uptake system permease proteinUniRef100_P40410Bacillus subtilisFeuBfeuB [ Bacillus subtilis ]3738Iron-uptake system binding proteinUniRef100_P40409Bacillus subtilisFeuAprecursor [ Bacillus subtilis ]3739Putative HTH-type transcriptionalUniRef100_P40408Bacillus subtilisYbbBregulator ybbB [ Bacillus subtilis ]3740Hypothetical protein ywnG [ BacillusUniRef100_P71042Bacillus subtilisYwnCsubtilis ]3741UPI00003CC069 UniRef100 entryUniRef100_UPI00003CC0693742IS1627s1-related, transposaseUniRef100_Q7CMD0Bacillus anthracis str. A2012[ Bacillus anthracis str. A2012]3743Hypothetical protein ywnB [ BacillusUniRef100_P71037Bacillus subtilisYwnBsubtilis ]3744Hypothetical protein ywnA [ BacillusUniRef100_P71036Bacillus subtilisYwnAsubtilis ]37453746Hypothetical protein ywmF [ BacillusUniRef100_P70963Bacillus subtilisYwmFsubtilis ]3747MoaA3748FdhD protein homolog [ BacillusUniRef100_P39756Bacillus subtilisFdhDsubtilis ]3749BH2528 protein [ Bacillus halodurans ]UniRef100_Q9K9W7BacillusYbfBhalodurans3750Formate dehydrogenase alpha chainUniRef100_Q9K9W5BacillusYjgC[ Bacillus halodurans ]halodurans3751YwmD3752Hypothetical protein ywmC precursorUniRef100_P70960Bacillus subtilisYwmC[ Bacillus subtilis ]3753Stage II sporulation protein D [ BacillusUniRef100_P07372Bacillus subtilisSpoIIDsubtilis ]3754UDP-N-acetylglucosamine 1-UniRef100_P70965Bacillus subtilisMurAAcarboxyvinyltransferase 1 [ Bacillussubtilis ]3755YwmB protein [ Bacillus subtilis ]UniRef100_O32277Bacillus subtilisYwmB3756YwzB protein [ Bacillus subtilis ]UniRef100_O32278Bacillus subtilis3757ATP synthase epsilon chain [ BacillusUniRef100_P37812Bacillus subtilisAtpCsubtilis ]3758ATP synthase beta chain [ BacillusUniRef100_P37809Bacillus subtilisAtpDsubtilis ]3759ATP synthase gamma chain [ BacillusUniRef100_P37810Bacillus subtilisAtpGsubtilis ]3760ATP synthase alpha chain [ BacillusUniRef100_Q659H2BacillusAtpAamyloliquefaciens ]amyloliquefaciens3761ATP synthase delta chain [ BacillusUniRef100_P37811Bacillus subtilisAtpHsubtilis ]3762ATP synthase B chain [ Bacillus subtilis ]UniRef100_P37814Bacillus subtilisAtpF3763ATP synthase a chain [ Bacillus subtilis ]UniRef100_P37813Bacillus subtilisAtpB3764AtpI3765Uracil phosphoribosyltransferaseUniRef100_P39149Bacillus subtilisUpp[ Bacillus subtilis ]3766Serine hydroxymethyltransferaseUniRef100_P39148Bacillus subtilisGlyA[ Bacillus subtilis ]3767Hypothetical protein ywlG [ BacillusUniRef100_P39157Bacillus subtilisYwlGsubtilis ]3768Hypothetical lacA/rpiB family proteinUniRef100_P39156Bacillus subtilisYwlFywlF [ Bacillus subtilis ]3769Putative low molecular weight protein-UniRef100_P39155Bacillus subtilisYwlEtyrosine-phosphatase ywlE [ Bacillussubtilis ]3770Hypothetical UPF0059 protein ywlDUniRef100_P39154Bacillus subtilisYwlD[ Bacillus subtilis ]3771Hypothetical protein ywlC [ BacillusUniRef100_P39153Bacillus subtilisYwlCsubtilis ]3772Hypothetical protein ywlB [ BacillusUniRef100_P39152Bacillus subtilisYwlBsubtilis ]3773Stage II sporulation protein R [ BacillusUniRef100_P39151Bacillus subtilisSpoIIRsubtilis ]3774Hypothetical protein yhjl [ BacillusUniRef100_O07563Bacillus subtilisGlcPsubtilis ]3775Hypothetical protein yhjJ [ BacillusUniRef100_O07564Bacillus subtilisYhjJsubtilis ]3776Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81NC8BacillusYhjKanthracis3777Hypothetical protein yhjL [ BacillusUniRef100_O07566Bacillus subtilisYhjLsubtilis ]3778Hypothetical protein yhjM [ BacillusUniRef100_O07567Bacillus subtilisYhjMsubtilis ]3779HemK protein homolog [ BacillusUniRef100_P45873Bacillus subtilisYwkEsubtilis ]3780Peptide chain release factor 1 [ BacillusUniRef100_P45872Bacillus subtilisPrfAsubtilis ]3781Hypothetical protein ywkD [ BacillusUniRef100_P45871Bacillus subtilisYwkDsubtilis ]3782Hypothetical protein ywkC [ BacillusUniRef100_P45870Bacillus subtilisYwkCsubtilis ]3783Hypothetical protein ywkB [ BacillusUniRef100_P45869Bacillus subtilisYwkBsubtilis ]3784Probable NAD-dependent malicUniRef100_P45868Bacillus subtilisYwkAenzyme 2 [ Bacillus subtilis ]3785Thymidine kinase [ Bacillus subtilis ]UniRef100_Q03221Bacillus subtilisTdk378650S ribosomal protein L31 [ BacillusUniRef100_Q03223Bacillus subtilissubtilis ]3787Transcription termination factor rhoUniRef100_Q03222Bacillus subtilisRho[ Bacillus subtilis ]3788Hypothetical protein ywjI [ BacillusUniRef100_Q03224Bacillus subtilisYwjIsubtilis ]3789UDP-N-acetylglucosamine 1-UniRef100_P19670Bacillus subtilisMurABcarboxyvinyltransferase 2 [ Bacillussubtilis ]3790Transaldolase [ Bacillus subtilis ]UniRef100_P19669Bacillus subtilisYwjH3791Probable fructose-bisphosphateUniRef100_P13243Bacillus subtilisFbaAaldolase 1 [ Bacillus subtilis ]3792Sporulation initiationUniRef100_P06628Bacillus subtilisSpo0Fphosphotransferase F [ Bacillus subtilis ]3793Hypothetical protein ywjG [ BacillusUniRef100_P06629Bacillus subtilisYwjGsubtilis ]3794PyrG3795DNA-directed RNA polymerase deltaUniRef100_P12464Bacillus subtilisRpoEsubunit [ Bacillus subtilis ]3796Acyl-CoA dehydrogenase [ BacillusUniRef100_Q814S9Bacillus cereusAcdAcereus ]3797Acyl-CoA dehydrogenase [ BacillusUniRef100_Q81JV7BacillusMmgCanthracis ]anthracis3798UPI00003CC303 UniRef100 entryUniRef100_UPI00003CC303MmgB3799Acetyl-CoA acetyltransferaseUniRef100_Q8EM47OceanobacillusMmgA[ Oceanobacillus iheyensis ]iheyensis3800Hypothetical protein ywjF [ BacillusUniRef100_P45866Bacillus subtilisYwjFsubtilis ]3801YwjE3802Hypothetical protein ywjC [ BacillusUniRef100_P45863Bacillus subtilissubtilis ]3803Arginyl-tRNA synthetase [ BacillusUniRef100_P46906Bacillus subtilisArgSsubtilis ]3804YwlB3805Agmatinase [ Bacillus subtilis ]UniRef100_P70999Bacillus subtilisSpeB3806Spermidine synthase [ Bacillus subtilis ]UniRef100_P70998Bacillus subtilisSpeE3807UPI00002A1DD1 UniRef100 entryUniRef100_UPI00002A1DD13808Hypothetical protein ywhE [ BacillusUniRef100_P70997Bacillus subtilisYwhEsubtilis ]3809Hypothetical protein ywhD [ BacillusUniRef100_P70996Bacillus subtilisYwhDsubtilis ]3810Hypothetical protein ywhC [ BacillusUniRef100_P70995Bacillus subtilisYwhCsubtilis ]3811Probable tautomerase ywhB [ BacillusUniRef100_P70994Bacillus subtilissubtilis ]3812Conserved protein [ MethanosarcinaUniRef100_Q8PUC6Methanosarcina mazeimazei ]3813Hypothetical protein ywgA [ BacillusUniRef100_P71046Bacillus subtilisYwgAsubtilis ]3814Hypothetical protein ywfO [ BacillusUniRef100_P39651Bacillus subtilisYwfOsubtilis ]3815YwzC protein [ Bacillus subtilis ]UniRef100_O32280Bacillus subtilis3816Prespore specific transcriptionalUniRef100_P39650Bacillus subtilisRsfAregulator rsfA [ Bacillus subtilis ]3817Hypothetical protein yjdJ precursorUniRef100_O31651Bacillus subtilis[ Bacillus subtilis ]3818Hypothetical protein ywfL [ BacillusUniRef100_P39648Bacillus subtilisYwfLsubtilis ]38194-hydroxybenzoate 3-monooxygenaseUniRef100_Q59724PseudomonasYhjG[ Pseudomonas sp]sp3820Benzoate transporter proteinUniRef100_Q6XUN5PseudomonasYceI[ Pseudomonas sp. ND6]sp. ND63821Putative 3,4-dihydroxyphenylacetateUniRef100_Q6N986Rhodopseudomonas palustris2,3-dioxygenase [ Rhodopseudomonaspalustris ]38224-oxalocrotonate tautomeraseUniRef100_Q9Z431Pseudomonas putida[ Pseudomonas putida ]38234-oxalocrotonate decarboxylaseUniRef100_Q84I96Pseudomonas sp. S-47[ Pseudomonas sp. S-47]3824DhaS3825Putative transcriptional regulatorUniRef100_Q9F7C7AgrobacteriumKipR[ Agrobacterium tumefaciens ]tumefaciens3826Hypothetical protein SCO6305UniRef100_Q93RT6Streptomyces coelicolor[ Streptomyces coelicolor ]3827Phosphate acetyltransferase [ BacillusUniRef100_P39646Bacillus subtilisPtasubtilis ]3828Hypothetical protein ywfI [ BacillusUniRef100_P39645Bacillus subtilisYwfIsubtilis ]3829YuaB3830Na+-transporting ATP synthaseUniRef100_Q9KF87BacillusYubG[ Bacillus halodurans ]halodurans3831Hypothetical protein ywdL [ BacillusUniRef100_P39620Bacillus subtilisYwdLsubtilis ]3832Multidrug ABC transporter, permeaseUniRef100_Q63D13Bacillus cereusYfiN[ Bacillus cereus ZK]ZK3833ABC transporter, permease proteinUniRef100_Q73AB4Bacillus cereusYfiM[ Bacillus cereus ]3834Multidrug ABC transporter, ATP-UniRef100_Q63D15Bacillus cereusYfiLbinding protein [ Bacillus cereus ZK]ZK3835Sensor histidine kinase, putativeUniRef100_Q73AB6Bacillus cereusYfiJ[ Bacillus cereus ]3836DNA-binding response regulator, LuxRUniRef100_Q73AB7Bacillus cereusYfiKfamily [ Bacillus cereus ]3837YwdK3838Putative purine permease ywdJUniRef100_P39618Bacillus subtilisYwdJ[ Bacillus subtilis ]3839Hypothetical protein ywdI [ BacillusUniRef100_P39617Bacillus subtilisYwdIsubtilis ]3840Probable aldehyde dehydrogenaseUniRef100_P39616Bacillus subtilisYwdHywdH [ Bacillus subtilis ]3841Uracil-DNA glycosylase [ BacillusUniRef100_P39615Bacillus subtilisUngsubtilis ]3842YwdF3843Phosphomethylpyrimidine kinaseUniRef100_P39610Bacillus subtilisThiD[ Bacillus subtilis ]3844Hypothetical protein ywdA [ BacillusUniRef100_P39609Bacillus subtilissubtilis ]3845Sucrose-6-phosphate hydrolaseUniRef100_P07819Bacillus subtilisSacA[ Bacillus subtilis ]3846PTS system, sucrose-specific IIBCUniRef100_P05306Bacillus subtilisSacPcomponent [ Bacillus subtilis ]3847SacT38483849Minor extracellular protease vprUniRef100_P29141Bacillus subtilisVprprecursor [ Bacillus subtilis ]38503851YwcH3852Nitro/flavin reductase [ Bacillus subtilis ]UniRef100_P39605Bacillus subtilisNfrA3853N-acyl-L-amino acid amidohydrolaseUniRef100_Q9KCF8BacillusYhaA[ Bacillus halodurans ]halodurans3854Hypothetical protein ywcF [ BacillusUniRef100_P39604Bacillus subtilisRodAsubtilis ]3855RodA3856Membrane protein [ Clostridium tetani ]UniRef100_Q897A1Clostridiumtetani3857Hypothetical protein ywcE precursorUniRef100_P39603Bacillus subtilis[ Bacillus subtilis ]3858Clostripain [ MethanosarcinaUniRef100_Q8TIY6Methanosarcina acetivoransacetivorans ]3859YfmK protein [ Bacillus subtilis ]UniRef100_Q34536Bacillus subtilisYfmK3860ABC transporter, ATP-UniRef100_Q882Y2PseudomonasYgaDbinding/permease proteinsyringae[ Pseudomonas syringae ]3861HlyB/MsbA family ABC transporterUniRef100_Q7NIB9GloeobacterYwjA[ Gloeobacter violaceus ]violaceus38623863386438653866Response regulator [ Bacillus cereusUniRef100_Q63FE4Bacillus cereusComAZK]ZK38673868Quinol oxidase polypeptide IV [ BacillusUniRef100_P34959Bacillus subtilisQoxDsubtilis ]3869Quinol oxidase polypeptide III (ECUniRef100_P34958Bacillus subtilisQoxC1.10.3.—) (Quinol oxidase aa3-600,subunit qoxC) (Oxidase aa(3)-600subunit 3) [ Bacillus subtilis ]3870Quinol oxidase polypeptide I (ECUniRef100_P34956Bacillus subtilisQoxB1.10.3.—) (Quinol oxidase aa3-600,subunit qoxB) (Oxidase aa(3)-600subunit 1) [ Bacillus subtilis ]3871QoxA3872UDP-glucose 4-epimeraseUniRef100_Q8R8R8ThermoanaerobacterGalE[ Thermoanaerobacter tengcongensis ]tengcongensis3873387438753876Hypothetical protein ywqN [ BacillusUniRef100_P96726Bacillus subtilisYwqNsubtilis ]3877Hypothetical protein ywcB [ BacillusUniRef100_P39600Bacillus subtilissubtilis ]3878Putative symporter ywcA [ BacillusUniRef100_P39599Bacillus subtilisYwcAsubtilis ]3879XylB3880Xylose isomerase [ Bacillus sp.]UniRef100_P54272Bacillus sp.XylA3881XylR3882Thiamine-phosphateUniRef100_P39594Bacillus subtilisThiEpyrophosphorylase [ Bacillus subtilis ]3883Hydroxyethylthiazole kinase [ BacillusUniRef100_P39593Bacillus subtilisThiMsubtilis ]3884Putative HTH-type transcriptionalUniRef100_P39592Bacillus subtilisYwbIregulator ywbI [ Bacillus subtilis ]3885Putative HTH-type transcriptionalUniRef100_P39592Bacillus subtilisYwbIregulator ywbI [ Bacillus subtilis ]38863887YwqH3888Holin-like protein cidA [ Bacillus subtilis ]UniRef100_P39591Bacillus subtilisYwbH3889Hypothetical protein ywbG [ BacillusUniRef100_P39590Bacillus subtilisYwbGsubtilis ]3890HlyC domain protein [ Bacillus cereus ]UniRef100_Q731T5Bacillus cereus3891OpuE3892Hypothetical UPF0064 protein ywbDUniRef100_P39587Bacillus subtilisYwbD[ Bacillus subtilis ]3893Hypothetical protein ywbC [ BacillusUniRef100_P39586Bacillus subtilisYwbCsubtilis ]3894Phosphoglycerate dehydrogenaseUniRef100_Q8GCC8BacillusYvcT[ Bacillus coagulans ]coagulans3895Glycerate dehydrogenaseUniRef100_Q8EP33Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]3896General stress protein A [ BacillusUniRef100_P25148Bacillus subtilisGspAsubtilis ]3897YdfH protein [ Bacillus subtilis ]UniRef100_P96685Bacillus subtilisYdfH3898YdfI protein [ Bacillus subtilis ]UniRef100_P96686Bacillus subtilisYdfI3899YdfJ protein [ Bacillus subtilis ]UniRef100_P96687Bacillus subtilisYdfJ3900Hypothetical protein ywaF [ BacillusUniRef100_P25149Bacillus subtilisYwaFsubtilis ]3901MFS transporter, phthalate permeaseUniRef100_Q884B5PseudomonasYcbEfamily [ Pseudomonas syringae ]syringae3902Hypothetical protein OB2215UniRef100_Q8EP98OceanobacillusYitF[ Oceanobacillus iheyensis ]iheyensis39032-dehydro-3-deoxyphosphogluconateUniRef100_Q8EP99OceanobacillusKdgAaldolase [ Oceanobacillus iheyensis ]iheyensis39042-keto-3-deoxygluconate kinaseUniRef100_Q8EPA0OceanobacillusKdgK[ Oceanobacillus iheyensis ]iheyensis3905Transcriptional regulatorUniRef100_Q8EPA1OceanobacillusKipR[ Oceanobacillus iheyensis ]iheyensis3906YwaD3907Hypothetical protein ywoD [ BacillusUniRef100_P94574Bacillus subtilisYwoDsubtilis ]39083909Hypothetical protein ywaC [ BacillusUniRef100_P39583Bacillus subtilisYwaCsubtilis ]39103911DltA3912Protein dltB [ Bacillus subtilis ]UniRef100_P39580Bacillus subtilisDltB3913D-alanine--poly(phosphoribitol) ligaseUniRef100_P39579Bacillus subtilissubunit 2 [ Bacillus subtilis ]3914Protein dltD precursor [ Bacillus subtilis ]UniRef100_P39578Bacillus subtilisDltD3915Putative branched-chain-amino-acidUniRef100_P39576Bacillus subtilisYwaAaminotransferase [ Bacillus subtilis ]3916Putative macrolide-efflux determinant,UniRef100_O32203Bacillus subtilisYvqJYvgJ [ Bacillus subtilis ]3917Probable 6-phospho-beta-glucosidaseUniRef100_P46320Bacillus subtilisLicH[ Bacillus subtilis ]3918PTS system, lichenan-specific IIAUniRef100_P46319Bacillus subtilisLicAcomponent [ Bacillus subtilis ]3919PTS system, lichenan-specific IICUniRef100_P46317Bacillus subtilisLicCcomponent [ Bacillus subtilis ]3920PTS system, lichenan-specific IIBUniRef100_P46318Bacillus subtiliscomponent [ Bacillus subtilis ]3921Probable licABCH operon regulatorUniRef100_P46321Bacillus subtilisLicR[ Bacillus subtilis ]39223923Putative 3-methyladenine DNAUniRef100_P94378Bacillus subtilisYxlJglycosylase [ Bacillus subtilis ]3924Transcriptional regulator [ RhizobiumUniRef100_Q988D9Rhizobium lotiYdhCloti]3925Citrate synthase III [ Bacillus subtilis ]UniRef100_P45858Bacillus subtilisMmgD39262-methylisocitrate dehydrataseUniRef100_Q6HJ23BacillusMmgE[ Bacillus thuringiensis ]thuringiensis3927Putative carboxyvinyl-UniRef100_P54528Bacillus subtilisYqiQcarboxyphosphonatephosphorylmutase [ Bacillus subtilis ]3928Chromate transporter [ BacillusUniRef100_Q6HIU6BacillusYwrAthuringiensis ]thuringiensis3929BH0575 protein [ Bacillus halodurans ]UniRef100_Q9KFB0Bacillus halodurans3930YwjA3931YesT protein [ Bacillus subtilis ]UniRef100_O31523Bacillus subtilisYesT3932YweA3933YweA3934Drug resistance transporter Bcr/CflAUniRef100_Q6HPJ5BacillusYdgKsubfamily; possible bicyclomycinthuringiensisresistance protein [ Bacillusthuringiensis]3935YxlG protein [ Bacillus subtilis ]UniRef100_P94375Bacillus subtilisYxlG3936YxlF protein [ Bacillus subtilis ]UniRef100_P94374Bacillus subtilisYxlF3937YxlE protein [ Bacillus subtilis ]UniRef100_P94373Bacillus subtilis39383939Hypothetical protein yxlC [ BacillusUniRef100_P94371Bacillus subtilissubtilis ]3940RNA polymerase sigma factor sigYUniRef100_P94370Bacillus subtilisSigY[ Bacillus subtilis ]3941YxlH protein [ Bacillus subtilis ]UniRef100_P94376Bacillus subtilisYxlH3942Catalase [ Bacillus halodurans ]UniRef100_Q9KDA8BacillusKatXhalodurans3943Catalase [ Bacillus subtilis ]UniRef100_Q9AQQ9Bacillus subtilisKatA3944Peroxide operon transcriptionalUniRef100_Q71YY4ListeriaPerRregulator [ Listeria monocytogenes ]monocytogenes3945Ferrochelatase [ OceanobacillusUniRef100_Q8ERX9OceanobacillusHemHiheyensis ]iheyensis3946Hypothetical protein yhcI [ BacillusUniRef100_P54593Bacillus subtilisYhcIsubtilis ]3947Bacitracin transport ATP-bindingUniRef100_Q81AB3Bacillus cereusYhcHprotein bcrA [ Bacillus cereus ]3948MrsE protein [ Bacillus sp.]UniRef100_Q9RC25Bacillus sp.39493950ABC-2 type transport system ATP-UniRef100_Q8ZZG9PyrobaculumYdbJbinding protein [ Pyrobaculumaerophilumaerophilum ]39513952Transcriptional regulator [ BacillusUniRef100_Q9KFL9Bacillus haloduranshalodurans ]39533954ClyA protein [Plasmid pAD1]UniRef100_Q52055Plasmid pAD1IspA3955Lantibiotic mersacidin transporterUniRef100_Q9KFM8BacillusYgaDsystem [ Bacillus halodurans ]halodurans39563957Lantibiotic mersacidin [ BacillusUniRef100_Q9KFM5Bacillus haloduranshalodurans ]3958Lantibiotic mersacidin modifyingUniRef100_Q9KFM4Bacillus haloduransenzyme [ Bacillus halodurans ]3959Pectate lyase Pel-34K [ Bacillus sp. P-UniRef100_Q8L0S6Bacillus sp. P-Pel2850]28503960Hypothetical UPF0031 protein yxkOUniRef100_P94368Bacillus subtilisYxkO[ Bacillus subtilis ]3961Transport ATP-binding protein cydDUniRef100_P94367Bacillus subtilisCydD[ Bacillus subtilis ]3962Transport ATP-binding protein cydCUniRef100_P94366Bacillus subtilisCydC[ Bacillus subtilis ]3963Cytochrome d ubiquinol oxidaseUniRef100_P94365Bacillus subtilisCydBsubunit II [ Bacillus subtilis ]3964Cytochrome d ubiquinol oxidaseUniRef100_P94364Bacillus subtilisCydAsubunit I [ Bacillus subtilis ]3965Hypothetical transport protein ywcJUniRef100_P39608Bacillus subtilisYwcJ[ Bacillus subtilis ]3966Hypothetical protein [ Bacillus cereus ]UniRef100_Q735J7Bacillus cereus3967Probable NAD-dependent malicUniRef100_P54572Bacillus subtilisMleAenzyme 1 [ Bacillus subtilis ]3968Malate-2H(+)/Na(+)-lactate antiporterUniRef100_P54571Bacillus subtilisMleN[ Bacillus subtilis ]3969AnsB3970L-asparaginase [ Bacillus subtilis ]UniRef100_P26900Bacillus subtilisAnsA3971AnsR3972Hypothetical protein ykgB [ BacillusUniRef100_O34499Bacillus subtilisYkgBsubtilis ]3973Hypothetical sensory transductionUniRef100_P42421Bacillus subtilisYxdJprotein yxdJ [ Bacillus subtilis ]3974Hypothetical sensor-like histidineUniRef100_P42422Bacillus subtilisYxdKkinase yxdK [ Bacillus subtilis ]3975Hypothetical ABC transporter ATP-UniRef100_P42423Bacillus subtilisYxdLbinding protein yxdL [ Bacillus subtilis ]3976Hypothetical protein yxdM [ BacillusUniRef100_P42424Bacillus subtilisYxdMsubtilis ]3977Hypothetical protein yxeA precursorUniRef100_P54940Bacillus subtilisYxeA[ Bacillus subtilis ]3978YxkH protein [ Bacillus subtilis ]UniRef100_P94361Bacillus subtilisYxkH3979Transcriptional regulator [ BacillusUniRef100_Q9KFA7BacillusYdeLhalodurans ]halodurans3980Hypothetical protein orfD [ LactococcusUniRef100_O86288LactococcusYdaMlactis ]lactis3981Citrate/malate transporter [ BacillusUniRef100_P94363Bacillus subtilisYxkJsubtilis ]3982GlycerophosphodiesterUniRef100_Q8EMK9OceanobacillusYhdWphosphodiesterase [ Oceanobacillusiheyensisiheyensis ]3983Hypothetical protein yhjA precursorUniRef100_O07555Bacillus subtilis[ Bacillus subtilis ]39843985YfnI [ Bacillus subtilis ]UniRef100_O06487Bacillus subtilisYfnI3986Hypothetical lipoprotein yfjD precursorUniRef100_O31555Bacillus subtilisYfjD[ Bacillus subtilis ]3987YxkD protein [ Bacillus subtilis ]UniRef100_P94357Bacillus subtilisYxkD3988Arginine repressor, argR [ BacillusUniRef100_Q81II2Bacillus cereusAhrCcereus ]3989Arginine deiminase [ Bacillus cereus ]UniRef100_Q73E87Bacillus cereusYkgA3990Ornithine carbamoyltransferaseUniRef100_Q73E86Bacillus cereusArgF[ Bacillus cereus ]3991Arginine/ornithine antiporter [ BacillusUniRef100_Q73E85Bacillus cereusYvsHcereus ]3992Carbamate kinase [ Bacillus cereus ]UniRef100_Q81IH8Bacillus cereus3993Transcriptional regulator, Crp familyUniRef100_Q6HP25BacillusFnr[ Bacillus thuringiensis ]thuringiensis3994Beta-glucosidase [ OceanobacillusUniRef100_Q8ES64OceanobacillusYdhPiheyensis ]iheyensis3995PTS system, lichenan-specific IIcUniRef100_Q6D101ErwiniaLicCcomponent [ Erwinia carotovora ]carotovora3996Hypothetical protein [ BacillusUniRef100_Q6HC13Bacillus thuringiensisthuringiensis ]3997SigV3998Anaerobic ribonucleoside-triphosphateUniRef100_O26387Methanobacteriumreductase activating proteinthermoautotrophicum[ Methanobacteriumthermoautotrophicum ]3999Hypothetical protein yxeC [ BacillusUniRef100_P54942Bacillus subtilissubtilis ]400040014002Hypothetical protein [ Anabaena sp.]UniRef100_Q9AIM4Anabaena sp.FtsH4003Peptidase T [ Bacillus subtilis ]UniRef100_P55179Bacillus subtilisPepT4004Beta-fructosidase FruA [ BacillusUniRef100_Q8GM36BacillusSacAmegaterium ]megaterium4005Sugar transporter FruP [ BacillusUniRef100_Q8GM37BacillusYwbFmegaterium ]megaterium4006ABC transporter membrane-spanningUniRef100_Q8DNN9StreptococcusYesQpermease-sugar transportpneumoniae[ Streptococcus pneumoniae ]4007ABC transporter membrane-spanningUniRef100_Q8DNN8StreptococcusYurNpermease-sugar transporterpneumoniae[ Streptococcus pneumoniae ]4008YesO4009Repressor FruR [ Bacillus megaterium ]UniRef100_Q8GM38BacillusRbsRmegaterium4010Hypothetical protein [ Bacillus cereus ]UniRef100_Q738I8Bacillus cereus4011YjeA4012Hypothetical protein yxjG [ BacillusUniRef100_P42318Bacillus subtilisYxjGsubtilis ]4013YkcB protein [ Bacillus subtilis ]UniRef100_O34575Bacillus subtilisYkcB4014Putative glycosyl transferase ykcCUniRef100_O34319Bacillus subtilisYkcC[ Bacillus subtilis ]4015GalE4016401740184019Hypothetical 10.1 kDa protein [ BacillusUniRef100_O50571Bacillus pseudofirmuspseudofirmus ]40204021Hypothetical transport protein yxjAUniRef100_P42312Bacillus subtilisYxjA[ Bacillus subtilis ]4022Catalase 2 [ Bacillus subtilis ]UniRef100_P42234Bacillus subtilisKatE4023Catalase 2 [ Bacillus subtilis ]UniRef100_P42234Bacillus subtilisKatE4024DNA gyrase inhibitory protein, GyrIUniRef100_Q97DI7ClostridiumYosT[ Clostridium acetobutylicum ]acetobutylicum4025Probable glycosyl hydrolase [ ErwiniaUniRef100_Q6D774ErwiniaYckEcarotovora ]carotovora4026PTS system, beta-glucoside-specificUniRef100_Q9KG19BacillusBglPenzyme II, ABC component [ Bacillushaloduranshalodurans ]4027Transcription antiterminator licTUniRef100_P39805Bacillus subtilisLicT[ Bacillus subtilis ]4028Hypothetical conserved proteinUniRef100_Q8ES40OceanobacillusYkoC[ Oceanobacillus iheyensis ]iheyensis4029Cation ABC transporter ATP-bindingUniRef100_Q8ES39OceanobacillusYkoDprotein [ Oceanobacillus iheyensis ]iheyensis4030Hypothetical conserved proteinUniRef100_Q8ES38OceanobacillusYkoE[ Oceanobacillus iheyensis ]iheyensis4031Transcriptional activator of extracellularUniRef100_Q8ESZ0OceanobacillusTenAenzyme genes [ Oceanobacillusiheyensisiheyensis ]4032Isocitrate lyase [ Bacillus cereus ]UniRef100_Q73C38Bacillus cereusYqiQ4033Malate synthase A [ Bacillus cereus ]UniRef100_Q73C39Bacillus cereus40344035Hypothetical protein yycA [ BacillusUniRef100_P37483Bacillus subtilisYycAsubtilis ]4036Bacitracin export permease proteinUniRef100_O34741Bacillus subtilisYtsDbceB [ Bacillus subtilis ]4037Bacitracin export ATP-binding proteinUniRef100_O34697Bacillus subtilisYtsCbceA [ Bacillus subtilis ]4038Sensor protein bceS [ Bacillus subtilis ]UniRef100_O35044Bacillus subtilisYtsB4039Sensory transduction protein bceRUniRef100_O34951Bacillus subtilisYtsA[ Bacillus subtilis ]4040Beta-glucosidase [ Bacillus subtilis ]UniRef100_P40740Bacillus subtilisBglH4041PTS system, beta-glucoside-specificUniRef100_P40739Bacillus subtilisBglPIIABC component [ Bacillus subtilis ]4042Hypothetical protein yxeG [ BacillusUniRef100_P54946Bacillus subtilisYxeGsubtilis ]4043Hypothetical protein yxeI [ BacillusUniRef100_P54948Bacillus subtilisYxeIsubtilis ]404440454046Hypothetical protein yxiA precursorUniRef100_P42293Bacillus subtilisYxiA[ Bacillus subtilis ]4047ATP-dependent RNA helicase dbpAUniRef100_P42305Bacillus subtilisDeaD[ Bacillus subtilis ]4048Hypothetical protein OB2811UniRef100_Q8EMN1Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]4049Hypothetical protein OB2810UniRef100_Q8EMN2Oceanobacillus iheyensis[ Oceanobacillus iheyensis ]4050YxiD40514052BH4015 protein [ Bacillus halodurans ]UniRef100_Q9K5S3BacillusYxiBhalodurans4053Pyrimidine-nucleoside phosphorylaseUniRef100_P39142Bacillus subtilisPdp[ Bacillus subtilis ]4054Pyrimidine nucleoside transport proteinUniRef100_P39141Bacillus subtilisNupC[ Bacillus subtilis ]4055Deoxyribose-phosphate aldolaseUniRef100_P39121Bacillus subtilisDra[ Bacillus subtilis ]4056Deoxyribonucleoside regulator [ BacillusUniRef100_P39140Bacillus subtilisDeoRsubtilis ]4057Hypothetical protein [ Bacillus anthracis ]UniRef100_Q81X49Bacillus anthracis4058YdaJ protein [ Bacillus subtilis ]UniRef100_P96584Bacillus subtilisYdaJ4059YdaK protein [ Bacillus subtilis ]UniRef100_P96585Bacillus subtilisYdaK4060YdaL protein [ Bacillus subtilis ]UniRef100_O31487Bacillus subtilisYdaL4061YdaM protein [ Bacillus subtilis ]UniRef100_P96587Bacillus subtilisYdaM4062YdaN protein [ Bacillus subtilis ]UniRef100_O31488Bacillus subtilisYdaN4063Valine-pyruvate aminotransferaseUniRef100_Q8YTB2Anabaena sp.AlaT[ Anabaena sp.]4064Hypothetical protein [ Leifsonia xyli ]UniRef100_Q6AEW0Leifsonia xyli4065Hypothetical protein [ Leifsonia xyli ]UniRef100_Q6AEW1Leifsonia xyliYwfB4066Similarities with putative carboxylaseUniRef100_Q7NA29PhotorhabdusYwfE[ Photorhabdus luminescens ]luminescens4067Transporter, Drug/Metabolite ExporterUniRef100_Q63AK7Bacillus cereusYoaVfamily [ Bacillus cereus ZK]ZK4068Probable fructose-bisphosphateUniRef100_P42420Bacillus subtilisFbaBaldolase 2 [ Bacillus subtilis ]4069IolI protein [ Bacillus subtilis ]UniRef100_P42419Bacillus subtilisIolI4070IolH protein [ Bacillus subtilis ]UniRef100_P42418Bacillus subtilisIolH4071Myo-inositol dehydrogenase [ BacillusUniRef100_Q6B6R7Bacillus subtilisIdhsubtilis ]4072Myo-inositol transport protein [ BacillusUniRef100_P42417Bacillus subtilisIolFsubtilis ]4073IolE protein [ Bacillus subtilis ]UniRef100_P42416Bacillus subtilisIolE4074Probable malonic semialdehydeUniRef100_P42415Bacillus subtilisIolDoxidative decarboxylase [ Bacillussubtilis ]4075Protein ioIC [ Bacillus subtilis ]UniRef100_P42414Bacillus subtilisIolC4076IolB protein [ Bacillus subtilis ]UniRef100_P42413Bacillus subtilisIolB4077Probable methylmalonate-UniRef100_P42412acylatingMmsAsemialdehyde dehydrogenase[acylating] [ Bacillus subtilis ]4078DNA-binding protein iolR [ BacillusUniRef100_P46337Bacillus subtilisIolRsubtilis ]4079IolS protein [ Bacillus subtilis ]UniRef100_P46336Bacillus subtilisIolS4080UPI00003CB380 UniRef100 entryUniRef100_UPI00003CB380GlpQ4081Putative glycerol-3-phosphateUniRef100_Q6GJY0StaphylococcusGlpTtransporter [ Staphylococcus aureus ]aureus4082Chaperone protein htpG [ BacillusUniRef100_P46208Bacillus subtilisHtpGsubtilis ]4083YfmM4084Hypothetical protein yxeH [ BacillusUniRef100_P54947Bacillus subtilisYxeHsubtilis ]4085Glycerol dehydrogenase [ ClostridiumUniRef100_Q97IL4ClostridiumAraMacetobutylicum ]acetobutylicum4086Phosphoserine phosphatase familyUniRef100_Q97IL5ClostridiumYkrXprotein [ Clostridium acetobutylicum ]acetobutylicum4087BH0833 protein [ Bacillus halodurans ]UniRef100_Q9KEL9Bacillus halodurans4088YxeB40894090BH3956 protein [ Bacillus halodurans ]UniRef100_Q9K5Y0BacillusYraHhalodurans40914092Ferrous iron transport protein BUniRef100_Q632N2Bacillus cereus ZK[ Bacillus cereus ZK]4093Lmo2104 protein [ ListeriaUniRef100_Q929R6Listeria monocytogenesmonocytogenes ]4094YfiQ protein [ Bacillus subtilis ]UniRef100_O31559Bacillus subtilisYfiQ4095ABC transporter permease proteinUniRef100_Q81EI1Bacillus cereusYxdM[ Bacillus cereus ]4096ABC transporter ATP-binding proteinUniRef100_Q81D39Bacillus cereusYxdL[ Bacillus cereus ]4097Sensor histidine kinase [ BacillusUniRef100_Q63AY4Bacillus cereusYxdKcereus ZK]ZK4098UPI00003CBD9F UniRef100 entryUniRef100_UPI00003CBD9FYxdJ4099Hypothetical protein [ Bacillus cereus ]UniRef100_Q72X82Bacillus cereus4100YoaH [ Bacillus subtilis ]UniRef100_O34576Bacillus subtilisYoaH4101Amino acid transporter [ BacillusUniRef100_Q9K609BacillusYflAhalodurans ]halodurans4102Alanine dehydrogenase [ BacillusUniRef100_Q9KAF8BacillusAldhalodurans ]halodurans4103Hypothetical family 53 glycosylUniRef100_O07013Bacillus subtilisYvfOhydrolase yvfO precursor [ Bacillussubtilis ]4104Hypotheticai protein yvfN [ BaciiiusUniRef1000_O07012Baciiius subtilisLacAsubtilis ]4105Hypothetical protein yvfM [ BacillusUniRef100_O07011Bacillus subtilisYvfMsubtilis ]4106Maltose/maltodextrin transport systemUniRef100_Q9KBA8BacillusYvfL[ Bacillus halodurans ]halodurans4107Hypothetical protein yvfK [ BacillusUniRef100_O07009Bacillus subtilisYvfKsubtilis ]4108LacR4109Galactokinase [ Streptococcus gordonii ]UniRef100_Q840N8StreptococcusGalkgordonii4110UDP-glucose 4-epimerase [ ListeriaUniRef100_Q928B6Listeria innocuaGalEinnocua ]4111UPI00003CB9B6 UniRef100 entryUniRef100_UPI00003CB9B6GalT4112Transcriptional repressor of the xyloseUniRef100_Q9KDW7BacillusXylRoperon [ Bacillus halodurans ]halodurans4113GntR4114GntK4115GntP4116GntZ4117Alcohol dehydrogenase [ BacillusUniRef100_Q818A4Bacillus cereusGbsBcereus ]4118Alkyl hydroperoxide reductase subunitUniRef100_P80239Bacillus subtilisAhpCC [ Bacillus subtilis ]4119NADH dehydrogenase [ BacillusUniRef100_P42974Bacillus subtilisAhpFsubtilis ]4120412141224123YvfR4124Hypothetical protein yvfS [ BacillusUniRef100_O07017Bacillus subtilisYvfSsubtilis ]4125YvfT4126Hypothetical protein yvfU [ BacillusUniRef100_O07019Bacillus subtilisYvfUsubtilis ]412741284129YtrE41304131413241334134Hypothetical protein [ DesulfotaleaUniRef100_Q6ARQ4Desulfotalea psychrophilapsychrophila ]4135Hypothetical protein [ DesulfotaleaUniRef100_Q6ARQ5Desulfotalea psychrophilapsychrophila ]413641374138Putative zinc metallopeptidaseUniRef100_Q894N2Clostridium[ Clostridium tetani ]tetani4139Type I restriction-modification systemUniRef100_Q6MH63Bdellovibrio bacteriovorusrestriction subunit [ Bdellovibriobacteriovorus ]4140Lin0523 protein [ Listeria innocua ]UniRef100_Q92ED7Listeria innocua41414142Hypothetical protein CAC1662UniRef100_Q97IH9Clostridium acetobutylicum[ Clostridium acetobutylicum ]4143Type I restriction-modification system,UniRef100_Q72BC7Desulfovibrio vulgarisM subunit [ Desulfovibrio vulgaris ]4144414541464147UPI00002C7192 UniRef100 entryUniRef100_UPI00002C71924148Cassette chromosome recombinase BUniRef100_Q8RPD2StaphylococcusSpoIVCA[ Staphylococcus aureus ]aureus4149Hypothetical UPF0247 protein yydaUniRef100_Q45601Bacillus subtilisYydA[ Bacillus subtilis ]415041514152YycN protein [ Bacillus subtilis ]UniRef100_O32293Bacillus subtilisYycN41534154UPI00003CA59D UniRef100 entryUniRef100_UPI00003CA59D4155Hypothetical serine protease yyxAUniRef100_P39668Bacillus subtilisYyxA[ Bacillus subtilis ]4156YycJ protein [ Bacillus subtilis ]UniRef100_Q45611Bacillus subtilisYycJ4157YycI protein [ Bacillus subtilis ]UniRef100_Q45612Bacillus subtilisYycI4158YycH protein [ Bacillus subtilis ]UniRef100_Q45613Bacillus subtilisYycH4159Sensor protein yycG [ Bacillus subtilis ]UniRef100_Q45614Bacillus subtilisYycG4160Transcriptional regulatory protein yycFUniRef100_P37478Bacillus subtilisYycF[ Bacillus subtilis ]4161Phosphohydrolase [ Bacillus cereus ]UniRef100_Q81I03Bacillus cereus4162Adenylosuccinate synthetase [ BacillusUniRef100_P29726Bacillus subtilisPurAsubtilis ]41634164Replicative DNA helicase [ BacillusUniRef100_P37469Bacillus subtilisDnaCsubtilis ]4165Hypothetical protein yycD [ BacillusUniRef100_P37480Bacillus subtilissubtilis ]4166Hypothetical protein yyzB [ BacillusUniRef100_O32296Bacillus subtilissubtilis ]4167Hypothetical transport protein yycBUniRef100_P37482Bacillus subtilisYycB[ Bacillus subtilis ]4168N-acetylglucosamine-6-phosphateUniRef100_Q9KFQ7BacillusNagAdeacetylase [ Bacillus halodurans ]halodurans4169NagB4170Transcriptional regulator [ BacillusUniRef100_Q9KFQ9BacillusYvoAhalodurans ]halodurans4171Hypothetical protein VP0543 [ VibrioUniRef100_Q87S81VibrioYbbIparahaemolyticus ]parahaemolyticus4172PTS system, n-acetylglucosamine-UniRef100_Q9KF24BacillusNagPspecific enzyme II, ABC componenthalodurans[ Bacillus halodurans ]417350S ribosomal protein L9 [ BacillusUniRef100_P37437Bacillus subtilisRplIsubtilis ]4174Hypothetical protein yybT [ BacillusUniRef100_P37484Bacillus subtilisYybTsubtilis ]4175Hypothetical protein yybS [ BacillusUniRef100_P37485Bacillus subtilisYybSsubtilis ]4176Spore coat protein F precursorUniRef100_P23261Bacillus subtilisCotF[ Bacillus subtilis ]4177Universal stress protein, Usp familyUniRef100_Q6HIV0BacillusYxiE[ Bacillus thuringiensis ]thuringiensis4178Sulfate permease [ BacillusUniRef100_Q6HIU9BacillusYbaRthuringiensis ]thuringiensis4179Hypothetical transport protein yybOUniRef100_P37489Bacillus subtilisYybO[ Bacillus subtilis ]418030S ribosomal protein S18 [ BacillusUniRef100_P21475Bacillus subtilissubtilis ]4181Single-strand binding protein [ BacillusUniRef100_P37455Bacillus subtilisSsbsubtilis ]418230S ribosomal protein S6 [ BacillusUniRef100_P21468Bacillus subtilissubtilis ]4183GTP-dependent nucleic acid-bindingUniRef100_P37518Bacillus subtilisYyaFprotein engD [ Bacillus subtilis ]4184Lin2921 protein [ Listeria innocua ]UniRef100_Q926W9Listeria innocua4185Hypothetical protein yyaD [ BacillusUniRef100_P37520Bacillus subtilisYyaDsubtilis ]4186Hypothetical protein yyaC [ BacillusUniRef100_P37521Bacillus subtilisYyaCsubtilis ]4187Stage 0 sporulation protein J [ BacillusUniRef100_P26497Bacillus subtilisSpo0Jsubtilis ]4188Soj4189Hypothetical protein [ BurkholderiaUniRef100_Q63L10BurkholderiaYdfGpseudomallei K96243]pseudomalleiK962434190RNA polymerase sigma factor, ECFUniRef100_Q63BC0Bacillus cereusSigMsubfamily [ Bacillus cereus ZK]ZK4191YyaA protein [ Bacillus subtilis ]UniRef100_P37524Bacillus subtilisYyaA4192Methyltransferase gidB [ BacillusUniRef100_P25813Bacillus subtilisGidBsubtilis ]4193Glucose inhibited division protein AUniRef100_P25812Bacillus subtilisGidA[ Bacillus subtilis ]4194Probable tRNA modification GTPaseUniRef100_P25811Bacillus subtilisThdFtrmE [ Bacillus subtilis ]4195Jag protein [ Bacillus subtilis ]UniRef100_Q01620Bacillus subtilisJag4196SpolllJ4197Ribonuclease P protein componentUniRef100_P25814Bacillus subtilisRnpA[ Bacillus subtilis ] TABLE 2Features of the Bacillus licheniformis genome and comparison with genomes of other Bacillus species.FeatureB. licheniformisB. subtilis aB. halodurans bOceanobacillus iheyensis cB. anthracis dB. cereus eChromosome Size (bp)4,222,3364,214,6304,202,3523,630,5285,227,2935,426,909G + C content (mol %)46.243.543.735.735.435.4Protein coding sequences419741064066349655085366Average length (bp)873896879883800835Percent of coding region878785858484Ribosomal RNA operons710871113Number of tRNAs8186786995108Phage-associated genes71268422762124Transposase genes of10093141810IS-elementsa Kunst, F., Ogasawara, N, Mozser, I., Albertini, A. M., Alloni, G., Azebedo, V., Bertero, M. G., Bessieres, P., Bolotin, A., and Borchert, S. et al. (1997) Nature 390, 249-256.b Takami, H., Nakasone, K., Takaki, Y., Maeno, G., Sasaki, R., Masui, N., Fuji, F., Hirama, C., Nakamura, Y., Ogasawara, N. et al. (2000) Nucleic Acids Res. 28, 4317-4331.c Takami, H., Takaki, Y., and Uchiyama, I. (2002) Nucleic Acids Res. 30, 3927-3935.d Read, T. D., Peterson, S. N., Tourasse, N., Baillie, L. W., Paulsen, I. T., Nelson, K. E., Tettelin, H., Fouts, D. E., Eisen, J. A., and Gill, S. R. et al. (2003) Nature 423, 81-86.e Ivanova, N, Sorokin, A., Anderson, I, Galleron, N., Candelon, B., Kapatral, V., Bhattacharyya, A., Reznik, G., Mikhailova, N., and Lapidus, A. et al. (2003) Nature 423, 87-91. TABLE 3Extracellular proteins predicted in the Bacillus licheniformis genomeSignalSEQ IDGenePeptideB. subtilisNO.NameLocationPutative ProductPutative FunctionGene11dacA[1-32]D-alanyl-D-alanine“Molecular Function: serineDacAcarboxypeptidase (penicillin-carboxypeptidase activitybinding protein 5)(GO: 0004185), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”45yabE[1-32]conserved hypothetical containing domain DUF348 YabEYabE67divlC[1-66]cell-division initiation protein“required for both vegetative andDivlCsporulation septum formation,Biological Process: cell cycle(GO: 0007049)”157BL01016[1-28]N-acetylmuramoyl-L-alanine“cell wall hydrolase, MolecularCwlDamidaseFunction: N-acetylmuramoyl-L-alanine amidase activity(GO: 0008745), BiologicalProcess: peptidoglycancatabolism (GO: 0009253)”159gerD[1-27]GerD“germination response to L-GerDalanine and to the combinationof glucose, fructose, L-asparagine, and KCl (earlystage),”161ybaN[1-42]“Polysaccharide“Biological Process:YbaNdeacetylase, Carbohydratecarbohydrate metabolismEsterase Family 4”(GO: 0005975), MolecularFunction: hydrolase activity,acting on carbon-nitrogen (butnot peptide) bonds(GO: 0016810)”162pbpX[1-43]penicillin-binding proteinPbpX167ybbC[1-23]conserved hypothetical protein YbbCYbbC168ybbD[1-27]“Glycoside hydrolase, family 3”“Molecular Function: hydrolaseYbbDactivity, hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975)”169ybbE[1-22]putative beta-lactamase YbbEYbbE227[1-34]putative ribose ABC transporter“ribose transport,”RbsB(ribose-binding protein)228yomI[1-32]putative lytic transglycosylase YomIYomI247penP[1-35]beta-lactamase precursor“Molecular Function: aspartic-PenPtype endopeptidase activity(GO: 0004190), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”249tatAD[1-35]component of the twin-arginine“Biological Process: protein transportpre-protein translocation(GO: 0015031), Cellular Component: integralpathwayto membrane (GO: 0016021)”267[1-26]“putative Proteinase inhibititorMolecular Function: serine-typeI4, serpin”endopeptidase inhibitor activity(GO: 0004867)268BL01663[1-22]Pectin lyase-likeYbdN287BL01793[1-31]putative lipoproteinYcdA303yvbX[1-33]“conserved protein, Glycoside“Molecular Function: catalyticYvbXHydrolase Family 18, YvbX”activity (GO: 0003824),Biological Process:carbohydrate metabolism(GO: 0005975)”304[1-27]“Chitinase precursor, Glycoside“Molecular Function: catalytic activityHydrolase Family 18”(GO: 0003824), Biological Process:carbohydrate metabolism (GO: 0005975)”312yvcE[1-31]“putative peptidoglycan hydrolase, DL-endopeptidase II family”YvcE348yckB[1-34]putative extracellular solute-“Molecular Function: transporterYckBbinding protein YckBactivity (GO: 0005215),Biological Process: transport(GO: 0006810), CellularComponent: periplasmic space(sensu Gram-negative Bacteria)(GO: 0030288)”353nucA[1-37]nuclease NucANucA359BL01722[1-34]putative extracellular solute-“Molecular Function: transporterYvfKbinding proteinactivity (GO: 0005215),Biological Process: transport(GO: 0006810)”373[1-25]hypothetical protein382BL01829[1-25]“putative extracellular solute-“Molecular Function: transporterYckKbinding protein, family 3”activity (GO: 0005215),Biological Process: transport(GO: 0006810), CellularComponent: periplasmic space(sensu Gram-negative Bacteria)(GO: 0030288)”403BL01746[1-28]ribose ABC transporter (ribose-“ribose transport,”RbsBbinding protein)409phy[1-30]phytase“hydrolysis of phytate intoPhyinorganic phosphate and myo-inositol,”426yclQ[1-25]Periplasmic binding protein“Molecular Function: iron ionYclQtransporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”438[1-26]hypothetical protein472BL02821[1-34]Cell envelope-related transcriptional attenuatorYvhJ483[1-42]hypothetical protein513ydcC[1-28]conserved membrane protein YdcCYdcC552yrhM[1-68]YrhMYrhM558ywpE[1-26]conserved protein YwpE“Biological Process: biosynthesis(GO: 0009058), Molecular Function:transferase activity (GO: 0016740)”576[1-34]putative transporter“Molecular Function: transporter activity,(GO: 0005215), Biological Process: transport(GO: 0006810), Cellular Component:membrane (GO: 0016020)”605yjeAA[1-37]conserved hypothetical proteinYjeA607amyL[1-30]“alpha amylase, Glycoside“Molecular Function: alpha-TreAHydrolase Family 13”amylase activity (GO: 0004556),Biological Process:carbohydrate metabolism(GO: 0005975)”610yvdG[1-28]putative maltose/maltodextrin“Molecular Function: transporterYvdGtransport system substrate-activity (GO: 0005215),binding proteinBiological Process: transport(GO: 0006810)”619[1-37]hypothetical protein620[1-28]hypothetical protein621ydjM[1-41]YdjMYdjM622ydjN[1-21]YdjNYdjN660yerB[1-28]conserved protein YerBYerB665yerH[1-26]YerHYerH683BL05063[1-35]mannan endo-1,4-beta-Degradation of mannan polysaccharidesmannosidase733[1-29]putative carboxypeptidase“Molecular Function: carboxypeptidase Aactivity (GO: 0004182), Biological Process:proteolysis and peptidolysis (GO: 0006508)”773yfkD[1-26]conserved protein YfkDYfkD776BL03088[1-24]“Polysaccharide deacetylase,“Biological Process:YfjSCarbohydrate Esterase Familycarbohydrate metabolism4”(GO: 0005975), MolecularFunction: hydrolase activity,acting on carbon-nitrogen (butnot peptide) bonds(GO: 0016810)”784yfjL[1-33]putative transporter YfjL“Molecular Function: transporterYfjLactivity (GO: 0005215),Biological Process: transport(GO: 0006810), CellularComponent: membrane(GO: 0016020)”787BL03096[1-26]hypothetical protein813BL03024[1-26]“putative extracellular solute-“Molecular Function: transporterYtcQbinding protein, family 1”activity (GO: 0005215),Biological Process: transport(GO: 0006810)”841appAC[1-30]oligopeptide ABC transporter“required for initiation ofOppA(binding protein)sporulation, competencedevelopment, and oligopeptidetransport, Molecular Function:transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”866ssuA[1-24]aliphatic sulfonate ABC transporter (binding lipoprotein)SsuA876[1-23]hypothetical protein886[1-23]hypothetical protein892[1-28]hypothetical proteinYhcC900BL03178[1-27]putative lipoproteinYhcJ902BL03161[1-31]hypothetical proteinYhcM904BL03176[1-29]hypothetical proteinYhcN905BL03175[1-30]hypothetical proteinYhcP934IytE[1-26]cell wall hydrolase phosphatase-“cell wall lytic activity, BiologicalLytEassociated proteinProcess: cell wall catabolism(GO: 0016998), BiologicalProcess: cell wall catabolism(GO: 0016998)”937[1-26]putative glucose dehydrogenase965BL02841[1-41]“Polysaccharide deacetylase,“Biological Process:YheNCarbohydrate Esterase Familycarbohydrate metabolism4”(GO: 0005975), MolecularFunction: hydrolase activity,acting on carbon-nitrogen (butnot peptide) bonds(GO: 0016810)”996prsA[1-30]molecular chaperone PrsA“essential for the stability ofPrsAsecreted proteins at stagesfollowing translocation acrossthe membrane, MolecularFunction: isomerase activity(GO: 0016853)”1001BL02907[1-31]hypothetical proteinYhaH1032yhfQ[1-32]putative transferase“Biological Process: metabolismYhfQ(GO: 0008152), MolecularFunction: transferase activity(GO: 0016740)”1044epr[1-27]extracellular serine protease“Molecular Function: subtilaseEpractivity (GO: 0004289),Biological Process: proteolysisand peptidolysis(GO: 0006508), MolecularFunction: subtilase activity(GO: 0004289), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”1061[1-24]hypothetical protein1063msmE[1-29]mutiple sugar-binding protein“Molecular Function: transporterMsmEMsmEactivity (GO: 0005215),Biological Process: transport(GO: 0006810)”1073BL01323[1-28]conserved hypothetical proteinLytB1077yvgL[1-29]molybdate transport system“Molecular Function: molybdate-YvgLsubstrate-binding proteintransporting ATPase activity(GO: 0015412), BiologicalProcess: molybdate iontransport (GO: 0015689)”1113BL01309[1-24]Short-chain“Biological Process: metabolismYcdFdehydrogenase/reductase SDR(GO: 0008152), MolecularFunction: oxidoreductaseactivity (GO: 0016491)”1150appA[1-32]oligopeptide ABC transporter“oligopeptideAppA(oligopeptide-binding protein)transport, Molecular Function:transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”1156oppA[1-29]oligopeptide ABC transporter“required for initiation ofOppA(binding protein)sporulation, competencedevelopment, and oligopeptidetransport, Molecular Function:transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”1165BL03332[1-31]conserved hypothetical proteinYflP1216abnAA[1-26]Glycoside Hydrolase Family 43“degradation of plant cell wallAbnApolysaccharide, MolecularFunction: hydrolase activity,hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975)”1219[1-30]hypothetical protein1226BL01957[1-23]conserved hypothetical proteinYoeB1227BL01953[1-26]Peptidoglycan-binding protein“Biological Process: cell wallYocHcatabolism(GO: 0016998), BiologicalProcess: cell wall catabolism(GO: 0016998)”1283yesO[1-28]putative transport system“Molecular Function: transporterYesOsubstrate-binding protein YesOactivity (GO: 0005215),Biological Process: transport(GO: 0006810)”1291yesW[1-33]putative polysaccharide lyase family 11 proteinYesW1299lplA[1-32]lipoprotein“Molecular Function: transporterLplAactivity (GO: 0005215),Biological Process: transport(GO: 0006810)”1311dppE[1-27]dipeptide ABC transporter“Molecular Function: transporterDppE(dipeptide-binding protein)activity (GO: 0005215),Biological Process: transport(GO: 0006810)”1319pelI[1-25]“pectate lyase family 1, PelI”Pel1332[1-30]hypothetical protein1341[1-27]hypothetical protein1345[1-27]hypothetical proteinYonS1368[1-28]hypothetical protein1415pbpC[1-30]penicillin-binding protein 3Molecular Function: penicillinPbpCbinding (GO: 0008658)1448[1-28]hypothetical protein1475BL05139[1-27]glycerophosphoryl diester“hydrolysis of deacylatedGIpQphosphodiesterasephospholipids, BiologicalProcess: glycerol metabolism(GO: 0006071), MolecularFunction: glycerophosphodiesterphosphodiesterase activity(GO: 0008889)”1479[1-27]hypothetical protein1493[1-27]hypothetical protein1496BL03556[1-25]putative Cell wall hydrolaseYkvT1498ykvV[1-28]hypothetical proteinContains thioredoxin domain 2YkvV1501[1-25]hypothetical protein1512ykwC[1-24]Hypothetical oxidoreductaseYkwC1513BL03646[1-27]Allergen V5/Tpx-1 relatedCellular Component:YkwDextracellular (GO: 0005576)1527[1-28]hypothetical protein1553BL01601[1-32]“putative secretion protein,“Molecular Function: proteinYknXprotein transporter”transporter activity(GO: 0008565), BiologicalProcess: protein secretion(GO: 0009306), CellularComponent: membrane(GO: 0016020)”1565[1-40]hypothetical protein1576ykyA[1-29]Hypothetical protein ykyAYkyA1601BL02997[1-27]hypothetical proteinYlaJ1617ylbC[1-34]conserved hypothetical proteinCellular Component:YlbCYlbCextracellular (GO: 0005576)1625ylbL[1-29]YlbLMolecular Function: proteinYlbLbinding (GO: 0005515)1635ftsL[1-59]cell-division protein“septum formation (earlyFtsLstage),”1636pbpB[1-42]penicillin-binding protein 2B“formation of the cell-divisionPbpBseptum (late stage),”1644divIB[1-57]cell-division initiation protein“probably involved in stabilizingDivIBor promoting the assembly ofthe division complex (septumformation),”1645BL02246[1-29]conserved hypothetical proteinYlxW1646BL02248[1-30]hypothetical proteinYlxX1650bprA[1-28]bacillopeptidase F“Molecular Function: subtilaseBpractivity (GO: 0004289),Biological Process: proteolysisand peptidolysis (GO: 0006508)”1651bprB[1-31]bacillopeptidase F“Molecular Function: subtilaseBpractivity (GO: 0004289),Biological Process: proteolysisand peptidolysis (GO: 0006508)”1752fliL[1-32]flagellar protein“required for flagellarFliLformation, Biological Process:ciliary/flagellar motility(GO: 0001539), BiologicalProcess: chemotaxis(GO: 0006935), CellularComponent: flagellar basal body(sensu Bacteria) (GO: 0009425)”1781celA[1-34]Glycoside Hydrolase Family 9“Molecular Function: hydrolase activity,hydrolyzing O-glycosyl compounds(GO: 0004553), Biological Process:carbohydrate metabolism (GO: 0005975)”1783celC[1-34]Glycoside Hydrolase Family 5“Molecular Function: hydrolase activity,hydrolyzing O-glycosyl compounds(GO: 0004553), Biological Process:carbohydrate metabolism (GO: 0005975)”1784celD[1-32]Glycoside Hydrolase family 5“Molecular Function: hydrolase activity,hydrolyzing O-glycosyl compounds(GO: 0004553), Biological Process:carbohydrate metabolism (GO: 0005975)”1820BL03655[1-31]conserved hypothetical proteinYmdA1839[1-29]hypothetical protein1904yoaO[1-38]YoaOYoaO1914yoaW[1-26]YoaWYoaW1926[1-38]phage-like protein1929nucB[1-34]nucleaseNucB1931BL05188[1-29]Peptidoglycan-binding proteinBiological Process: cell wallYneAcatabolism (GO: 0016998)1946yneN[1-29]putative thiol: disulfide“Molecular Function: electronYneNinterchange protein YneNtransporter activity(GO: 0005489), BiologicalProcess: electron transport(GO: 0006118)”1983bglC[1-50]“endo-1,4-beta-glucanase,“Molecular Function: hydrolaseBglCGlycoside hydrolase Family 5”activity, hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975),”1990ywoF[1-22]“Polysaccharide Lyase Family 9, YwoF”YwoF1995BL00297[1-27]conserved hypothetical proteinYddR2011yjmF[1-31]Short-chain“Biological Process: metabolismYjmFdehydrogenase/reductase SDR(GO: 0008152), MolecularFunction: oxidoreductaseactivity (GO: 0016491)”2016dctB[1-29]possible C4-dicarboxylate“,Biological Process: transportDctBbinding protein(GO: 0006810), CellularComponent: periplasmic space(sensu Gram-negative Bacteria)(GO: 0030288)”2028dacC[1-29]penicillin-binding protein (D-“Molecular Function: serineDacCalanyl-D-alaninecarboxypeptidase activitycarboxypeptidase)(GO: 0004185), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”2060[1-37]hypothetical protein2072BL00899[1-28]“Spore germination B3 GerAC like, C-terminal”YndF2105[1-33]conserved hypothetical protein2108BL01303[1-26]Peptidoglycan-binding protein“Biological Process: cell wallYocHcatabolism(GO: 0016998), BiologicalProcess: cell wall catabolism(GO: 0016998)”2123[1-36]hypothetical protein2132BL01404[1-24]hypothetical proteinYoqH2152yvgO[1-25]conserved protein YvgOYvgO2160lytF[1-27]gamma-D-glutamate-meso-“cell wall lytic activity, BiologicalLytFdiaminopimelate muropeptidaseProcess: cell wall catabolism(major autolysin) (CWBP49′)(GO: 0016998)”2167yoaJ[1-26]YoaJYoaJ2177ctpA[1-37]carboxy-terminal processing“,Biological Process: proteolysisCtpAproteaseand peptidolysis (GO: 0006508),Molecular Function: serine-typepeptidase activity(GO: 0008236)”2180yodJ[1-31]putative carboxypeptidaseYodJ2207ypmS[1-34]conserved protein YpmSYpmS2208ypmR[1-24]conserved protein YpmRMolecular Function: catalyticYpmRactivity (GO: 0003824)2209ypmQ[1-25]conserved hypothetical YpmQBiological Process: electronYpmQtransport (GO: 0006118)2218ypjP[1-30]conserved hypothetical protein YpjPYpjP2266ponA[1-63]“penicillin-binding“involved in division septumPonAproteins, Glycosyl Transferaseformation,”Family 51”2271aspB[1-23]aspartate aminotransferase“Molecular Function:AspBtransaminase activity(GO: 0008483), BiologicalProcess: biosynthesis(GO: 0009058)”2272ypmB[1-25]conserved protein YpmBYpmB2315BL02789[1-29]hypothetical proteinYphF2328sleB[1-34]spore cortex-lytic enzymeSleB2330ansZA[1-18]putative“Biological Process: amino acidYccCAsparaginase/glutaminasemetabolism(GO: 0006520), BiologicalProcess: amino acid metabolism(GO: 0006520)”2334BL02228[1-27]putative hydrolaseMolecular Function: hydrolaseYpbGactivity (GO: 0016787)2344yocH[1-31]putative peptidogycan hydrolase“Biological Process: cell wall catabolismYocH(GO: 0016998), Biological Process: cell wallcatabolism (GO: 0016998)”2347BL00652[1-32]hypothetical proteinLytR2348yheN[1-53]“Carbohydrate Esterase Family“Biological Process:YheN4, YheN”carbohydrate metabolism(GO: 0005975), MolecularFunction: hydrolase activity,acting on carbon-nitrogen (butnot peptide) bonds(GO: 0016810)”2349[1-29]hypothetical protein2360dacB[1-28]D-alanyl-D-alanine“required for spore cortexDacBcarboxypeptidase (penicillin-synthesis, Molecular Function:binding protein 5*)serine carboxypeptidase activity(GO: 0004185), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”2371BL01892[1-44]conserved hypothetical proteinYpuD2376BL03279[1-24]conserved hypothetical proteinYpuA2392dacF[1-33]penicilin binding protein“required for spore cortexDacF(putative D-alanyl-D-alaninesynthesis, Molecular Function:carboxypeptidase)serine carboxypeptidase activity(GO: 0004185), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”2400BL01161[1-28]“Phosphotransferase system,“Molecular Function: sugar porter activitylactose/cellobiose-specific IIB(GO: 0005351), Biological Process:subunit”phosphoenolpyruvate-dependent sugarphosphotransferase system (GO: 0009401)”2418lip[1-31]lipaseMolecular Function: catalyticLipactivity (GO: 0003824)2420appAA[1-32]oligopeptide ABC transporter“oligopeptideAppA(oligopeptide-binding protein)transport, Molecular Function:transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”2435[1-24]hypothetical protein2436[1-29]hypothetical protein2438BL00808[1-38]hypothetical proteinYmaC2449[1-35]hypothetical protein2450[1-31]conserved hyopothetical proteinSsuA2456BL01380[1-28]“Phosphotransferase system,“Molecular Function: sugar porter activitylactose/cellobiose-specific IIB(GO: 0005351), Biological Process:subunit”phosphoenolpyruvate-dependent sugarphosphotransferase system (GO: 0009401)”2481BL01514[1-36]Cell wall hydrolase/autolysin“Molecular Function: N-Yqilacetylmuramoyl-L-alanineamidase activity (GO: 0008745),Biological Process:peptidoglycan catabolism(GO: 0009253)”2482yqiH[1-33]YqiHYqiH2484[1-26]hypothetical protein2499spoIIIAH[1-32]SpoIIIAH“mutants block sporulation afterSpoIIIAHengulfment,”2505spoIIIAB[1-23]SpoIIIAB“mutants block sporulation afterSpoIIIABengulfment,”2517yqhL[1-24]conserved protein YqhLYqhL2518opuAC[1-31]glycine betaine ABC transporter“glycine betaineOpuAC(glycine betaine-binding protein)transport, Molecular Function:transporter activity(GO: 0005215), MolecularFunction: binding(GO: 0005488), BiologicalProcess: transport(GO: 0006810)”2528tasA[1-28]translocation-dependent antimicrobial spore componentTasA2530yqxM[1-44]YqxMYqxM2531yqzG[1-24]YqzGYqzG2533comGG[1-38]probably part of the DNA“required for exogenous DNA-ComGGtransport machinery ComGGbinding,”2546yqgU[1-28]conserved protein YqgUYqgU2548fhuD[1-32]ferrichrome ABC transporter“Molecular Function: iron ionFhuD(ferrichrome-binding protein)transporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”2560yqzC[1-33]conserved protein YqzCYqzC2565pstS[1-33]phosphate ABC transporter“involved in high-affinityPstS(binding protein)phosphate uptake, MolecularFunction: transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”2566pbpA[1-44]penicillin-binding protein 2A“involved in the synthesis ofPbpApeptidoglycan associated withcell wall elongation in sporeoutgrowth, Molecular Function:penicillin binding (GO: 0008658)”2571yqfZ[1-40]conserved protein YqfZ2616BL01411[1-37]conserved hypothetical proteinYqfA2632yqxA[1-29]YqxAYqxA2633spoIIP[1-55]SpoIIP“required for dissolution of theSpoIIPseptal cell wall,”2652BL02075[1-36]putative lipoproteinMolecular Function: catalyticYqeFactivity (GO: 0003824)2697appAB[1-36]oligopeptide ABC transporter“oligopeptideAppA(oligopeptide-binding protein)transport, Molecular Function:transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”2706[1-32]putative phosphoesterase2707BL02428[1-27]carboxylesterase familyMolecular Function: catalyticPnbAactivity (GO: 0003824)2710BL03118[1-28]hypothetical proteinYndA2712sacC[1-24]Glycoside Hydrolase Family 32“Molecular Function: hydrolaseSacCactivity, hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975)”2729BL00468[1-33]Periplasmic iron-binding protein“Molecular Function: iron ionYxeBtransporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”2745yrrS[1-50]conserved protein YrrSYrrS2752yrrL[1-44]conserved protein YrrLYrrL2771yrvJ[1-29]N-acetylmuramoyl-L-alanine amidase YrvJYrvJ2793ymaC[1-24]phage-related protein YmaCYmaC2797coxA[1-27]spore cortex proteinCoxA2801nadB[1-37]L-aspartate oxidase“required for NAD biosynthesis,”NadB2818mreC[1-33]cell-shape determining protein“,Biological Process: regulationMreCof cell shape (GO: 0008360)”2866[1-28]hypothetical protein2872gerM[1-34]spore germination protein GerM“germination (cortex hydrolysis)GerMand sporulation (stage II,multiple polar septa),”2898[1-33]hypothetical protein2911araN[1-32]sugar-binding protein“L-arabinose transport, MolecularAraNFunction: transporter activity(GO: 0005215), BiologicalProcess: transport(GO: 0006810)”2916abnAB[1-28]Glycoside Hydrolase Family 43“degradation of plant cell wallAbnApolysaccharide, MolecularFunction: hydrolase activity,hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975)”2939pelB[1-31]“pectate lyase, Polysaccharide Lyase Family 1”PelB3005ytxE[1-51]YtxECellular Component: outerYtxEmembrane (sensu Gram-negative Bacteria)(GO: 0009279)3049ytcQ[1-30]putative multiple sugar transport“Molecular Function: transporterYtcQsystem substrate-binding proteinactivity (GO: 0005215),YtcQBiological Process: transport(GO: 0006810)”3059BL00013[1-30]putative lipoproteinYusA3081ytlA[1-33]putative sulfonate transport system substrate-binding protein YtlAYtlA3088ytkA[1-29]conserved protein YtkAYtkA3093BL05310[1-29]Periplasmic solute binding“Molecular Function: bindingYcdHprotein(GO: 0005488), CellularComponent: periplasmic space(sensu Gram-negative Bacteria)(GO: 0030288)”3217[1-22]hypothetical proteinMolecular Function: catalytic activity(GO: 0003824)3235yuiC[1-34]conserved protein YuiCYuiC3264yutC[1-24]conserved protein YutCYutC3266BL02121[1-22]putative metallopeptidase“Molecular Function:YunAmetalloendopeptidase activity(GO: 0004222), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”3267[1-32]hypothetical protein3269yunB[1-41]conserved protein YunBYunB3284yurYA[1-40]extracellular ribonucleaseMolecular Function: nucleaseYurIactivity (GO: 0004518)3298yusA[1-28]putative ABC transport system substrate-binding protein YusAYusA3318yfiY[1-29]ABC transport system substrate-“Molecular Function: iron ionYfiYbinding proteintransporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”3319yusW[1-28]YusWYusW3333gerAC[1-25]spore germination protein A3“germination response to L-GerACprecursoralanine and related amino acids(earliest stage),”3338yvqG[1-39]conserved protein YvqG“Biological Process: metabolismYvqG(GO: 0008152), MolecularFunction: oxidoreductaseactivity (GO: 0016491)”3349yvrC[1-37]putative iron transport system“Molecular Function: iron ionYvrCsubstrate-binding protein YvrCtransporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”3380BL02684[1-27]putative Extracellular solute-Molecular Function: transporterYvfKbinding proteinactivity (GO: 0005215)3384BL02680[1-31]putative Glycoside Hydrolase Family 3YbbD3387mntA[1-28]manganese transport system“Molecular Function: bindingYcdHsubstrate-binding protein(GO: 0005488), CellularComponent: periplasmic space(sensu Gram-negative Bacteria)(GO: 0030288)”3429[1-33]hypothetical protein3465[1-32]hypothetical protein3492opuCC[1-32]glycine betaine/carnitine/choline“high affinity transport of glycineOpuCCABC transporterbetaine, carnitine, and(osmoprotectant-binding protein)choline, Molecular Function:transporter activity(GO: 0005215), MolecularFunction: binding(GO: 0005488), BiologicalProcess: transport(GO: 0006810)”3499BL03470[1-29]“Periplasmic binding“Molecular Function: iron ionYfiYprotein, putative iron transporter”transporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”3510[1-26]hypothetical protein3547sacB[1-30]“levansucrase, Glycoside“Molecular Function: hydrolaseSacBHydrolase Family 68”activity, hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process: sugarutilization (GO: 0007587)”3548levB[1-33]“endolevanase, Glycoside Hydrolase Family 32”YveB3559[1-29]putative ribonuclease“Molecular Function: RNA binding(GO: 0003723), Molecular Function:endoribonuclease activity (GO: 0004521)”3578yvpB[1-39]putative cysteine protease YvpB“Molecular Function: cysteine-YvpBtype endopeptidase activity(GO: 0004197), BiologicalProcess: proteolysis andpeptidolysis (GO: 0006508)”3579yvpA[1-29]Polysaccharide Lyase Family 3YvpA3587yvnB[1-29]YvnBYvnB3600ctpB[1-37]“Peptidase S41A, C-terminal“Biological Process: proteolysisYvjBprotease”and peptidolysis (GO: 0006508),Molecular Function: serine-typepeptidase activity (GO: 0008236)”3602BL03388[1-291]“Spectrin repeat, Rudiment“,”YvcEsingle hybrid motif”3643lytC[1-14]N-acetylmuramoyl-L-alanine“involved in cell separation, cellLytCamidase (major autolysin)wall turnover, antibiotic-induced(CWBP49)lysis, motility and general celllysis induced by sodiumazide, Molecular Function: N-acetylmuramoyl-L-alanineamidase activity (GO: 0008745),Biological Process:peptidoglycan catabolism3644lytB[1-26]modifier protein of major autolysin LytC (CWBP76)LytB3645BL03297[1-25]membrane bound lipoproteininvolved in the secretion ofLytAmajor autolysin3646lytR[1-32]membrane-bound protein“attenuator role for lytABC andLytRlytR expression,”3656lytD[1-29]“N-acetylglucosaminidase“involved in cell separation, cellLytD(major autolysin), Glycosidewall turnover, antibiotic-inducedHydrolase Family 73”lysis and motility, MolecularFunction: amidase activity(GO: 0004040), BiologicalProcess: peptidoglycancatabolism (GO: 0009253)”3670pgdS[1-34]gamma-DL-glutamyl hydrolase“gamma-DL-glutamyl hydrolaseYwtDcleaving the gamma-glutamylbond only between D- and L-glutamic acids of PGA, DL-endopeptidase II family”3671ywtC[1-25]YwtC3672pgsAA[1-47]poly-gamma-glutamate synthesis proteinYwtB3680rbsB[1-28]ribose ABC transporter (ribose-“ribose transport,”RbsBbinding protein)3738feuA[1-28]iron-binding protein“component of iron-uptakeFeuAsystem, Molecular Function: ironion transporter activity(GO: 0005381), BiologicalProcess: high affinity iron iontransport (GO: 0006827)”3751ywmD[1-25]YwmDYwmD3752ywmC[1-24]YwmCYwmC3753spoIID[1-33]SpoIID“required for completeSpoIIDdissolution of the asymmetricseptum,”3755ywmB[1-30]conserved protein YwmBYwmB3773spoIIR[1-29]SpoIIRrequired for processing of pro-SpoIIRsigma-E3801ywjE[1-28]putative Phospholipase“Molecular Function: catalyticYwjEactivity (GO: 0003824),Biological Process: metabolism(GO: 0008152)”3808BL03962[1-41]“Penicillin-binding protein,“Molecular Function: penicillinYwhEGlycosyl Transferase Family 51”binding (GO: 0008658),Biological Process: cell wallbiosynthesis (sensu Bacteria)(GO: 0009273)”3812[1-25]hypothetical protein3829BL03904[1-32]hypothetical proteinYuaB3849vpr[1-29]extracellular serine protease“Molecular Function: subtilaseVpractivity (GO: 0004289),Biological Process: proteolysisand peptidolysis (GO: 0006508)”3906ywaD[1-31]Putative aminopeptidase“Biological Process: proteolysisYwaDand peptidolysis (GO: 0006508),Molecular Function: peptidaseactivity (GO: 0008233)”3914dltD[1-27]precusor DltDD-alanine esterification ofDltDlipoteichoic acid and wallteichoic acid (D-alanine transferfrom undecaprenol-P to thepoly(glycerophosphate) chain ofLTA)3920licB[1-24]phosphotransferase system“Molecular Function: sugar porter activity(PTS) lichenan-specific enzyme(GO: 0005351), Biological Process:IIB componentphosphoenolpyruvate-dependent sugarphosphotransferase system (GO: 0009401)”3933BL05372[1-31]hypothetical proteinYweA3954lanP[1-25]serine protease“subtilase activityIspA(GO: 0004289), proteolysis andpeptidolysis (GO: 0006508),lantibiotic leader peptideprocessing”3970ansA[1-29]L-asparaginase“Molecular Function:AnsAasparaginase activity(GO: 0004067), BiologicalProcess: amino acid metabolism(GO: 0006520)”3977BL02958[1-25]conserved hypothetical proteinYxeA3978yxkH[1-28]“Polysaccharide deacetylase,“Biological Process:YxkHCarbohydrate Esterase Familycarbohydrate metabolism4”(GO: 0005975), MolecularFunction: hydrolase activity,acting on carbon-nitrogen (butnot peptide) bonds(GO: 0016810)”3982BL02963[1-30]Glycerophosphoryl diester“Biological Process: glycerolYhdWphosphodiesterasemetabolism (GO: 0006071),Molecular Function:glycerophosphodiesterphosphodiesterase activity(GO: 0008889)”3983BL05379[1-28]hypothetical protein3996[1-73]hypothetical protein4011BL05383[1-34]hypothetical proteinYjeA4016[1-31]hypothetical proteinBiological Process: electron transport(GO: 0006118)4046yxiA[1-27]“Glycoside hydrolase, family 43”“Molecular Function: hydrolaseYxiAactivity, hydrolyzing O-glycosylcompounds (GO: 0004553),Biological Process:carbohydrate metabolism(GO: 0005975)”4058ydaJ[1-29]putative Glycoside transferaseYdaJ4080glpQ[1-29]glycerophosphoryl diester“hydrolysis of deacylatedGlpQphosphodiesterasephospholipids, BiologicalProcess: glycerol metabolism(GO: 0006071), MolecularFunction: glycerophosphodiesterphosphodiesterase activity(GO: 0008889)”4099yxeA[1-34]conserved hypothetical protein4103yvfO[1-28]Glyccosyl Hydrolase Family 53YvfO4107cycB[1-32]“putative extracellular solute-“Molecular Function: transporterYvfKbinding protein, family 1 CycB”activity (GO: 0005215),Biological Process: transport(GO: 0006810)”4121[1-28]hypothetical protein4128[1-34]hypothetical protein4130[1-42]hypothetical protein4158yycH[1-36]conserved hypothetical YycHYycH TABLE 4Codon Usage Table for Chromosome# CodonAmino acidFract/1000NumberGCAA0.23018.39422495GCCA0.27221.72426567GCGA0.30124.08229451GCTA0.19715.76619281TGCC0.6625.1136253TGTC0.3382.6133195GACD0.43222.12927063GATD0.56829.11435605GAAE0.70451.72163253GAGE0.29621.79726657TTCF0.35416.03419609TTTF0.64629.22335738GGAG0.31622.64427693GGCG0.37426.82532806GGGG0.17112.28715026GGTG0.1399.95712177CACH0.3868.41210288CATH0.61413.36916350ATAI0.1017.2178826ATCI0.48734.74142487ATTI0.41229.37635926AAAK0.69349.12560078AAGK0.30721.73926586CTAL0.0323.1063798CTCL0.15214.84818158CTGL0.26325.59231298CTTL0.22922.33027309TTAL0.14313.92017023TTGL0.18117.63921572ATGM1.00026.54132458AACN0.50519.15923431AATN0.49518.78022967CCAP0.1124.189CCCP0.1204.4775475CCGP0.52019.40523731CCTP0.2489.23611295CAAQ0.46516.65620369CAGQ0.53519.17923455AGAR0.2189.61111754AGGR0.1466.4487886CGAR0.0743.2754005CGCR0.25311.17313664CGGR0.1948.53810441CGTR0.1145.0446168AGCS0.26315.89319436AGTS0.0633.8204672TCAS0.20212.17314887TCCS0.1549.28711357TCGS0.17110.28912583TCTS0.1478.86510841ACAT0.32716.96920752ACCT0.1889.76511942ACGT0.37319.40423730ACTT0.1125.8337134GTAV0.1449.71011875GTCV0.36124.34229769GTGV0.23816.04219619GTTV0.25717.35421223TGGW1.00010.30312600TACY0.39813.46816471TATY0.60220.34824885TAA*0.5511.9622400TAG*0.1570.558682TGA*0.2921.0411273 TABLE 5Signal Peptide Codon Usage TableCodonAmino acidFract/1000NumberGCAA0.29442.315106GCCA0.21931.53779GCGA0.24234.73187GCTA0.24435.1388TGCC0.5439.9825TGTC0.4578.38321GACD0.2312.3956GATD0.7697.98420GAAE0.78415.96840GAGE0.2164.39111TTCF0.33521.95655TTTF0.66543.513109GGAG0.34122.35556GGCG0.26217.16643GGGG0.18311.97630GGTG0.21313.97235CACH0.3162.3956CATH0.6845.1913ATAI0.1429.9825ATCI0.46632.73582ATTI0.39227.54569AAAK0.76761.876155AAGK0.23318.76247CTAL0.057.18618CTCL0.09813.97235CTGL0.23533.53384CTTL0.1622.75457TTAL0.22131.53779TTGL0.23533.53384ATGM151.497129AACN0.48210.77827AATN0.51811.57729CCAP0.1644.7912CCCP0.1925.58914CCGP0.45213.17433CCTP0.1925.58914CAAQ0.47511.57729CAGQ0.52512.77432AGAR0.3339.9825AGGR0.082.3956CGAR0.1073.1948CGCR0.164.7912CGGR0.1735.1913CGTR0.1474.39111AGCS0.17114.7737AGTS0.0937.98420TCAS0.24120.75852TCCS0.14812.77432TCGS0.13411.57729TCTS0.21318.36346ACAT0.26211.17828ACCT0.2349.9825ACGT0.32713.97235ACTT0.1787.58519GTAV0.21614.37136GTCV0.18612.37531GTGV0.33522.35556GTTV0.26317.56544TGGW17.58519TACY0.4055.98815TATY0.5958.78222TAA*000TAG*000TGA*000 Example 6 Identification of Genes Induced by Glucose Limitation Using DNA Microarrays Bacillus licheniformis ATCC 14580 was grown in duplicate shake flasks containing 100 ml of Spizizen I medium (Anagnostopoulos and Spizizen, 1961 , Journal of Bacteriology 81: 741-746). The inocula for the shake flasks were obtained from 10 ml of mid-log cells (approximately 80-90 Klett units) and a 0 hour total RNA sample was extracted from 30 ml of the mid-log cells, as described below. Total cellular RNA was also purified from 10 ml of the Spizizen I shake flasks that were sampled at 2, 4, 6 and 8 hours post inoculum. All of the cell samples were mixed with two volumes of RNAProtect RNA stabilizing reagent (QIAGEN, Inc., Valencia, Calif.) for 5 minutes. The cells were subsequently pelleted at 2800×g, 4° C. for 10 minutes, the supernatant was discarded, the cell pellets were frozen at −80° C., and cellular RNA was purified using a FastRNA Pro Blue kit (QBiogene, Carlsbad, Calif.) using the protocol supplied by the manufacturer. The frozen cell pellets from each sample were resuspended in 2 ml of RNAPro solution provided in the FastRNA Pro Blue kit and RNA was obtained from two lysis matrix B vials. Sixteen replicate cDNA targets for the 0 time point and two technical replicate cDNA targets for each of the rest of the time points were prepared and hybridized to Bacillus licheniformis DNA microarrays prepared as described by Berka et al., 2002 , Molecular Microbiology 43: 1331-1345. Dye swap hybridizations using the zero time point as reference were prepared as described in Hu et al. [In G. Parmigiani, E. S. Garrett, R. A Irizarry, and S. L Zeger (eds.) The Analysis of Gene Expression Data, pp. 318-319, Springer-Verlag, New York (2003)]. The arrays were scanned with an Axon 4000B scanner and formatted for analysis with GenePix Pro version 5.0 (Axon Instruments, Inc. Redwood City, Calif.). The fluorescence intensity data from GenePix was imported directly into S-Plus ArrayAnalyzer version 2 software (Insightful Corporation, Seattle, Wash.) for statistical analysis. The raw intensity data were normalized using the lowess (locally weighted regression) function provided in S-Plus ArrayAnalyzer software, and the genes that were differentially expressed at each time point relative to the time zero reference were identified by employing a multiple comparison t-test with Bonferroni correction as outlined in the user's guide to S-Plus ArrayAnalyzer software (Insightful Corp., Seattle, Wash.). The family-wise error rate (FWER) was set at 0.1. The list of genes at each time point that passed these statistical criteria were used to query a pathway-genome database established using Pathway Tools Suite software (Karp et al., 2002 , Bioinformatics 18 suppl. 1: S225-S232), and the gene expression profiles were painted onto a schematic of metabolic pathways. In doing so, those pathways that were significantly altered at each time point were identified. As a result of this analysis the following observations were made: (1) Early in the cultures, genes encoding enzymes of the glycolytic pathway were slightly induced reflecting the change from partially depleted glucose levels in the inoculum culture to ample glucose in the shake flask medium; (2) As glucose was progressively depleted in the shake flask culture (times 6 and 8 hours), genes encoding glycolytic pathway enzymes were down-regulated; (3) genes that encode enzymes for phenylalanine, tryptophan, histidine, and arginine biosynthetic pathways were up-regulated during stationary phase suggesting that cells had exhausted critical amino acids, and they were turning on the genes for pathways to synthesize more of these essential nutrients; (4) as cells entered stationary phase, cell division, DNA replication, and ribosome production all decreased to a low level. This was reflected in the shut-down of purine and pyrimidine biosynthetic pathways and down-regulation of genes encoding many ribosomal proteins. SEQUENCE LISTINGS Incorporated herein by reference are 2 copies of the Sequence Listing on compact disk. Copy 1 is done on a Intel x86 machine format, in Windows XP operating system compatibility, there is one file saved as 10588.200, and is 19,455 kb, and created on Nov. 4, 2004. Copy 2 is identical to Copy 1. The content of the attached compact disks are the same and includes no new matter. The invention described and claimed herein is not to be limited in scope by the specific aspects herein disclosed, since these aspects are intended as illustrations of several aspects of the invention. Any equivalent aspects are intended to be within the scope of this invention. Indeed, various modifications of the invention in addition to those shown and described herein will become apparent to those skilled in the art from the foregoing description. Such modifications are also intended to fall within the scope of the appended claims. In the case of conflict, the present disclosure including definitions will control. Various references are cited herein, the disclosures of which are incorporated by reference in their entireties. SEQUENCE LISTINGS This application contains 2 copies of the Sequence Listing on compact disk, which are incorporated herein by reference. Copy 1 is done on an Intel x86 machine format, in Windows XP operating system compatibility, there is one file saved as 10588200 SQ, and is 19,445 kb bytes, and created on May 3, 2005. 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(b) a polypeptide having cellulose 1,4-beta-cellobiosidase activity encoded by a gene comprising a nucleotide sequence which hybridizes under high stringency conditions with the nucleotide sequence of SEQ ID NO: 1782, or the full-length complementary strand thereof, wherein high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and 50% formamide, and washing three times each for 15 minutes using 2×SSC, 0.2% SDS at 65° C."],"number":1,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1, which comprises an amino acid sequence having at least 95% identity with the amino acid sequence of SEQ ID NO: 5979."],"number":2,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1, which is encoded by a gene comprising a nucleotide sequence which hybridizes under high stringency conditions with the nucleotide sequence of SEQ ID NO: 1782, or the full-length complementary strand thereof, wherein high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 μg/ml sheared and denatured salmon sperm DNA, and 50% a formamide, and washing three times each for 15 minutes using 2×SSC, 0.2% a SDS at 65° C."],"number":3,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 2,4-beta-cellobiosidase activity of claim 1, which is encoded by a Bacillus licheniformis ATCC 14580 gene."],"number":4,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 2, which comprises an amino acid sequence having at least 97% a identity with the amino acid sequence of SEQ ID NO: 5979."],"number":5,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1, which comprises the amino acid sequence of SEQ ID NO: 5979."],"number":6,"annotation":false,"claim":true,"title":false},{"lines":["The polypeptide having cellulose 1,4-beta-cellobiosidase activity of claim 1, which consists of the amino acid sequence of SEQ ID NO: 5979, or a fragment thereof which retains cellulose 1,4-beta-cellobiosidase activity."],"number":7,"annotation":false,"claim":true,"title":false}]}},"filters":{"npl":[],"notNpl":[],"applicant":[],"notApplicant":[],"inventor":[],"notInventor":[],"owner":[],"notOwner":[],"tags":[],"dates":[],"types":[],"notTypes":[],"j":[],"notJ":[],"fj":[],"notFj":[],"classIpcr":[],"notClassIpcr":[],"classNat":[],"notClassNat":[],"classCpc":[],"notClassCpc":[],"so":[],"notSo":[],"sat":[]},"sequenceFilters":{"s":"SEQIDNO","d":"ASCENDING","p":0,"n":10,"sp":[],"si":[],"len":[],"t":[],"loc":[]}}